Page last updated: 2024-08-07 20:38:27

B-cell lymphoma 6 protein

A B-cell lymphoma 6 protein that is encoded in the genome of human. [PRO:CNA, UniProtKB:P41182]

Synonyms

BCL-6;
B-cell lymphoma 5 protein;
BCL-5;
Protein LAZ-3;
Zinc finger and BTB domain-containing protein 27;
Zinc finger protein 51

Research

Bioassay Publications (2)

TimeframeStudies on this Protein(%)All Drugs %
pre-19900 (0.00)18.7374
1990's0 (0.00)18.2507
2000's0 (0.00)29.6817
2010's1 (50.00)24.3611
2020's1 (50.00)2.80

Compounds (3)

Drugs with Activation Measurements

DrugTaxonomyMeasurementAverage (mM)Bioassay(s)Publication(s)
amanozineHomo sapiens (human)Kd1,200.000022
rifamycin svHomo sapiens (human)Kd1,000.000011
pf-562,271Homo sapiens (human)Kd88.000011

Enables

This protein enables 13 target(s):

TargetCategoryDefinition
intronic transcription regulatory region sequence-specific DNA bindingmolecular functionBinding to an intronic DNA sequence that regulates the transcription of the transcript it is contained within. [GOC:txnOH]
transcription corepressor bindingmolecular functionBinding to a transcription corepressor, a protein involved in negative regulation of transcription via protein-protein interactions with transcription factors and other proteins that negatively regulate transcription. Transcription corepressors do not bind DNA directly, but rather mediate protein-protein interactions between repressing transcription factors and the basal transcription machinery. [GOC:krc]
DNA-binding transcription repressor activity, RNA polymerase II-specificmolecular functionA DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets transcribed by RNA polymerase II. [GOC:txnOH-2018]
chromatin bindingmolecular functionBinding to chromatin, the network of fibers of DNA, protein, and sometimes RNA, that make up the chromosomes of the eukaryotic nucleus during interphase. [GOC:jl, ISBN:0198506732, PMID:20404130]
DNA-binding transcription factor activitymolecular functionA transcription regulator activity that modulates transcription of gene sets via selective and non-covalent binding to a specific double-stranded genomic DNA sequence (sometimes referred to as a motif) within a cis-regulatory region. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. [GOC:txnOH-2018]
protein bindingmolecular functionBinding to a protein. [GOC:go_curators]
chromatin DNA bindingmolecular functionBinding to DNA that is assembled into chromatin. [GOC:mah]
identical protein bindingmolecular functionBinding to an identical protein or proteins. [GOC:jl]
sequence-specific DNA bindingmolecular functionBinding to DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. [GOC:jl]
metal ion bindingmolecular functionBinding to a metal ion. [GOC:ai]
DNA-binding transcription factor bindingmolecular functionBinding to a DNA-binding transcription factor, a protein that interacts with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. [GOC:txnOH-2018]
sequence-specific double-stranded DNA bindingmolecular functionBinding to double-stranded DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA, e.g. promotor binding or rDNA binding. [GOC:dos, GOC:sl]
RNA polymerase II cis-regulatory region sequence-specific DNA bindingmolecular functionBinding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase II. [GOC:txnOH-2018]

Located In

This protein is located in 5 target(s):

TargetCategoryDefinition
nucleuscellular componentA membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. [GOC:go_curators]
nucleoplasmcellular componentThat part of the nuclear content other than the chromosomes or the nucleolus. [GOC:ma, ISBN:0124325653]
nucleoluscellular componentA small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. [ISBN:0198506732]
Golgi apparatuscellular componentA membrane-bound cytoplasmic organelle of the endomembrane system that further processes the core oligosaccharides (e.g. N-glycans) added to proteins in the endoplasmic reticulum and packages them into membrane-bound vesicles. The Golgi apparatus operates at the intersection of the secretory, lysosomal, and endocytic pathways. [ISBN:0198506732]
paraspecklescellular componentDiscrete subnuclear bodies in the interchromatin nucleoplasmic space, often located adjacent to nuclear specks. 10-20 paraspeckles are typically found in human cell nuclei. [GOC:jl, PMID:11790299]

Active In

This protein is active in 1 target(s):

TargetCategoryDefinition
nucleoplasmcellular componentThat part of the nuclear content other than the chromosomes or the nucleolus. [GOC:ma, ISBN:0124325653]

Involved In

This protein is involved in 47 target(s):

TargetCategoryDefinition
negative regulation of transcription by RNA polymerase IIbiological processAny process that stops, prevents, or reduces the frequency, rate or extent of transcription mediated by RNA polymerase II. [GOC:go_curators, GOC:txnOH]
cell morphogenesisbiological processThe developmental process in which the size or shape of a cell is generated and organized. [GOC:clt, GOC:dph, GOC:go_curators, GOC:tb]
negative regulation of cell-matrix adhesionbiological processAny process that stops, prevents, or reduces the rate or extent of cell adhesion to the extracellular matrix. [GOC:hjd]
plasma cell differentiationbiological processThe process in which a B cell acquires the specialized features of a plasma cell. A plasma cell is a lymphocyte which develops from a B cell and produces high amounts of antibody. [GOC:jal]
germinal center formationbiological processThe process in which germinal centers form. A germinal center is a specialized microenvironment formed when activated B cells enter lymphoid follicles. Germinal centers are the foci for B cell proliferation and somatic hypermutation. [GO_REF:0000022, GOC:jal, ISBN:081533642X]
regulation of germinal center formationbiological processAny process that modulates the frequency, rate, or extent of germinal center formation. [GOC:add]
negative regulation of B cell apoptotic processbiological processAny process that stops, prevents, or reduces the frequency, rate, or extent of B cell apoptotic process. [GOC:add, GOC:mtg_apoptosis]
transcription by RNA polymerase IIbiological processThe synthesis of RNA from a DNA template by RNA polymerase II (RNAP II), originating at an RNA polymerase II promoter. Includes transcription of messenger RNA (mRNA) and certain small nuclear RNAs (snRNAs). [GOC:jl, GOC:txnOH, ISBN:0321000382]
inflammatory responsebiological processThe immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages. [GO_REF:0000022, ISBN:0198506732]
DNA damage responsebiological processAny process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to its DNA from environmental insults or errors during metabolism. [GOC:go_curators]
cell-matrix adhesionbiological processThe binding of a cell to the extracellular matrix via adhesion molecules. [GOC:hb]
Rho protein signal transductionbiological processAn intracellular signaling cassette in which a small monomeric GTPase of the Rho subfamily relays a signal. [GOC:bf]
spermatogenesisbiological processThe developmental process by which male germ line stem cells self renew or give rise to successive cell types resulting in the development of a spermatozoa. [GOC:jid, ISBN:9780878933846, PMID:28073824, PMID:30990821]
protein localizationbiological processAny process in which a protein is transported to, or maintained in, a specific location. [GOC:ai]
pyramidal neuron differentiationbiological processThe process in which a neuroblast or one of its progeny commits to a pyramidal neuron fate, migrates from the ventricular zone to the appropriate layer in the cortex and develops into a mature neuron. [GO_REF:0000021, GOC:cls, GOC:dgh, GOC:dph, GOC:jid]
actin cytoskeleton organizationbiological processA process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins. [GOC:dph, GOC:jl, GOC:mah]
negative regulation of cell growthbiological processAny process that stops, prevents, or reduces the frequency, rate, extent or direction of cell growth. [GOC:go_curators]
positive regulation of B cell proliferationbiological processAny process that activates or increases the rate or extent of B cell proliferation. [GOC:mah]
heterochromatin formationbiological processAn epigenetic gene silencing mechanism in which chromatin is compacted into heterochromatin, resulting in a chromatin conformation refractory to transcription. This process starts with heterochromatin nucleation, its spreading, and ends with heterochromatin boundary formation. [PMID:25192661, PMID:33827924]
negative regulation of mast cell cytokine productionbiological processAny process that stops, prevents, or reduces the frequency, rate, or extent of mast cell cytokine production. [GOC:mah]
negative regulation of mononuclear cell proliferationbiological processAny process that stops, prevents, or reduces the frequency, rate or extent of mononuclear cell proliferation. [GOC:add]
negative regulation of Rho protein signal transductionbiological processAny process that stops, prevents, or reduces the frequency, rate or extent of Rho protein signal transduction. [GOC:bf]
B cell proliferationbiological processThe expansion of a B cell population by cell division. Follows B cell activation. [GOC:jl]
regulation of T cell proliferationbiological processAny process that modulates the frequency, rate or extent of T cell proliferation. [GOC:jl]
positive regulation of apoptotic processbiological processAny process that activates or increases the frequency, rate or extent of cell death by apoptotic process. [GOC:jl, GOC:mtg_apoptosis]
regulation of memory T cell differentiationbiological processAny process that modulates the frequency, rate, or extent of memory T cell differentiation. [ISBN:0781735149]
T-helper 2 cell differentiationbiological processThe process in which a relatively unspecialized T cell acquires specialized features of a T-helper 2 (Th2) cell. A Th2 cell is a CD4-positive, alpha-beta T cell that has the phenotype GATA-3-positive and produces interleukin-4. [CL:0000546, GOC:ebc]
positive regulation of regulatory T cell differentiationbiological processAny process that activates or increases the frequency, rate or extent of differentiation of regulatory T cells. [ISBN:0781735149]
negative regulation of T-helper 2 cell differentiationbiological processAny process that stops, prevents, or reduces the frequency, rate or extent of T-helper 2 cell differentiation. [GOC:go_curators]
positive regulation of neuron differentiationbiological processAny process that activates or increases the frequency, rate or extent of neuron differentiation. [GOC:go_curators]
negative regulation of Notch signaling pathwaybiological processAny process that stops, prevents, or reduces the frequency, rate or extent of the Notch signaling pathway. [GOC:go_curators]
negative regulation of DNA-templated transcriptionbiological processAny process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. [GOC:go_curators, GOC:txnOH]
isotype switching to IgE isotypesbiological processThe switching of activated B cells from IgM biosynthesis to IgE biosynthesis, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and IgE constant region gene segments in the immunoglobulin heavy chain locus. [ISBN:0781735149, PMID:12370374, PMID:2113175, PMID:9186655]
negative regulation of isotype switching to IgE isotypesbiological processAny process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgE isotypes. [GOC:jid]
erythrocyte developmentbiological processThe process whose specific outcome is the progression of an erythrocyte over time, from its formation to the mature structure. [GOC:devbiol]
cell motilitybiological processAny process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another. [GOC:dgh, GOC:dph, GOC:isa_complete, GOC:mlg]
regulation of immune responsebiological processAny process that modulates the frequency, rate or extent of the immune response, the immunological reaction of an organism to an immunogenic stimulus. [GOC:ai]
negative regulation of plasma cell differentiationbiological processAny process that stops, prevents or reduces the frequency, rate or extent of plasma cell differentiation. [GOC:TermGenie]
negative regulation of mitotic cell cycle DNA replicationbiological processAny process that stops, prevents or reduces the frequency, rate or extent of mitotic cell cycle DNA replication. [GO_REF:0000058, GOC:mtg_cell_cycle, GOC:TermGenie, PMID:1234]
positive regulation of cell motilitybiological processAny process that activates or increases the frequency, rate or extent of cell motility. [GOC:mah]
negative regulation of cellular senescencebiological processAny process that stops, prevents or reduces the frequency, rate or extent of cellular senescence. [GOC:BHF]
regulation of cytokine productionbiological processAny process that modulates the frequency, rate, or extent of production of a cytokine. [GOC:add, ISBN:0781735149]
regulation of immune system processbiological processAny process that modulates the frequency, rate, or extent of an immune system process. [GOC:add]
regulation of inflammatory responsebiological processAny process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. [GOC:ai]
regulation of cell differentiationbiological processAny process that modulates the frequency, rate or extent of cell differentiation, the process in which relatively unspecialized cells acquire specialized structural and functional features. [GOC:go_curators]
regulation of cell population proliferationbiological processAny process that modulates the frequency, rate or extent of cell proliferation. [GOC:jl]
type 2 immune responsebiological processAn immune response which is associated with resistance to extracellular organisms such as helminths and pathological conditions such as allergy, which is orchestrated by the production of particular cytokines, most notably IL-4, IL-5, IL-10, and IL-13, by any of a variety of cell types including T-helper 2 cells, eosinophils, basophils, mast cells, and nuocytes, resulting in enhanced production of certain antibody isotypes and other effects. [GOC:add, ISBN:0781735149, PMID:18000958, PMID:18007680, PMID:20065995, PMID:20200518]