Page last updated: 2024-10-06

superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis

Proteins (10)

ProteinSynonymsTaxonomy
Uridine 5'-monophosphate synthaseUMP synthaseArabidopsis thaliana (thale cress)
Ribonucleoside-diphosphate reductase small chain AEC 1.17.4.1; Ribonucleoside-diphosphate reductase R2A subunit; AtRNR2; Protein R2at; Ribonucleotide reductase small subunit AArabidopsis thaliana (thale cress)
Ribonucleoside-diphosphate reductase large subunitEC 1.17.4.1; Protein DEFECTIVE IN POLLEN DNA DEGRADATION 2; Ribonucleoside-diphosphate reductase R1 subunit; AtRNR1Arabidopsis thaliana (thale cress)
Deoxyuridine 5'-triphosphate nucleotidohydrolasedUTPase; EC 3.6.1.23; dUTP pyrophosphatase; dUTP-pyrophosphatase-like 1; AtDUT1Arabidopsis thaliana (thale cress)
UMP-CMP kinase 3EC 2.7.4.14; Deoxycytidylate kinase; CK; dCMP kinase; Uridine monophosphate/cytidine monophosphate kinase; UMP/CMP kinase; UMP/CMPKArabidopsis thaliana (thale cress)
Dihydroorotase, mitochondrialDHOase; EC 3.5.2.3Arabidopsis thaliana (thale cress)
Nucleoside diphosphate kinase II, chloroplasticNDK II; NDP kinase II; NDPK II; NDPK Ia; EC 2.7.4.6Arabidopsis thaliana (thale cress)
Nucleoside diphosphate kinase 1EC 2.7.4.6; Nucleoside diphosphate kinase I; NDK I; NDP kinase I; NDPK IArabidopsis thaliana (thale cress)
Aspartate carbamoyltransferase, chloroplasticEC 2.1.3.2; Aspartate transcarbamylase; ATCaseArabidopsis thaliana (thale cress)
Bifunctional dihydrofolate reductase-thymidylate synthasePisum sativum (garden pea)

Compounds (30)

CompoundDescription
diphosphoric acid
hydronium ion
uridine diphosphateA uracil nucleotide containing a pyrophosphate group esterified to C5 of the sugar moiety.
Carbon DioxideA colorless, odorless gas that can be formed by the body and is necessary for the respiration cycle of plants and animals.
Orthophosphate
Aspartate
adenosine diphosphateAdenosine 5'-(trihydrogen diphosphate). An adenine nucleotide containing two phosphate groups esterified to the sugar moiety at the 5'-position.
Uridine TriphosphateUridine 5'-(tetrahydrogen triphosphate). A uracil nucleotide containing three phosphate groups esterified to the sugar moiety.
hydrogen carbonate
MagnesiumA metallic element that has the atomic symbol Mg, atomic number 12, and atomic weight 24.31. It is important for the activity of many enzymes, especially those involved in OXIDATIVE PHOSPHORYLATION.
WaterA clear, odorless, tasteless liquid that is essential for most animal and plant life and is an excellent solvent for many substances. The chemical formula is hydrogen oxide (H2O). (McGraw-Hill Dictionary of Scientific and Technical Terms, 4th ed)
dihydrofolateRN given refers to (L)-isomer
PlastoquinonePolyunsaturated side-chain quinone derivative which is an important link in the electron transport chain of green plants during the photosynthetic conversion of light energy by photophosphorylation into the potential energy of chemical bonds.
Metavanadate
thymidine 5'-triphosphateRN given refers to parent cpd
Thymidine Monophosphate5-Thymidylic acid. A thymine nucleotide containing one phosphate group esterified to the deoxyribose moiety.
Carbamyl PhosphateThe monoanhydride of carbamic acid with PHOSPHORIC ACID. It is an important intermediate metabolite and is synthesized enzymatically by CARBAMYL-PHOSPHATE SYNTHASE (AMMONIA) and CARBAMOYL-PHOSPHATE SYNTHASE (GLUTAMINE-HYDROLYZING).
glutamate
adenosine triphosphateAn adenine nucleotide containing three phosphate groups esterified to the sugar moiety. In addition to its crucial roles in metabolism adenosine triphosphate is a neurotransmitter.
polyglutamineRN given for (D)-isomer
Cytidine TriphosphateCytidine 5'-(tetrahydrogen triphosphate). A cytosine nucleotide containing three phosphate groups esterified to the sugar moiety.
Uridine Monophosphate5'-Uridylic acid. A uracil nucleotide containing one phosphate group esterified to the sugar moiety in the 2', 3' or 5' position.
2'-deoxyuridylic acidRN given refers to parent cpd
Cytidine DiphosphateCytidine 5'-(trihydrogen diphosphate). A cytosine nucleotide containing two phosphate groups esterified to the sugar moiety. Synonyms: CRPP; cytidine pyrophosphate.
Deoxycytidine MonophosphateDeoxycytidine (dihydrogen phosphate). A deoxycytosine nucleotide containing one phosphate group esterified to the deoxyribose moiety in the 2'-,3'- or 5- positions.
thymidine 5'-diphosphatesee also record for thymidine 3',5'-diphosphate, RN 2863-04-9
deoxyuridine triphosphate
2'-deoxycytidine 5'-triphosphateRN given refers to unlabeled parent cpd
deoxyuridine triphosphate
orotidylic acidstructure