Page last updated: 2024-08-17

uridine and ribothymidine

uridine has been researched along with ribothymidine in 77 studies

Research

Studies (77)

Timeframe	Studies, this research(%)	All Research%
pre-1990	26 (33.77)	18.7374
1990's	9 (11.69)	18.2507
2000's	10 (12.99)	29.6817
2010's	24 (31.17)	24.3611
2020's	8 (10.39)	2.80

Authors

Authors	Studies
Balatsos, NA; Bougiatioti, S; Chatzileontiadou, DS; Gkaragkouni, DN; Kaffesaki, E; Kantsadi, AL; Komiotis, D; Leonidas, DD; Manta, S; Maragozidis, P; Parmenopoulou, V; Skamnaki, VT; Zographos, SE; Zounpoulakis, P	1
Delk, AS; Nagle, DP; Rabinowitz, JC; Straub, KM	1
Aschhoff, HJ; Gassen, HG; Hoburg, A; Kersten, H; Manderschied, U	1
Roe, BA; Tsen, HY	1
Arnold, HH; Kersten, H; Schmidt, W	1
Dudock, B; Lesiewicz, J	1
Albani, M; Davanloo, P; Kersten, H; Sprinzl, M; Watanabe, K	1
Dudock, B; Marcu, D; Marcu, K	1
Delk, AS; Nagle, DP; Rabinowitz, JC; Romeo, JM	1
Dudock, BS; Marcu, KB	1
Hori, N; Mikami, Y; Sunagawa, K; Uehara, K; Watanabe, M	1
Bazin, H; Duplaa, AM; Favario, S; Gasparutto, D; Guy, A; Livache, T; Molko, D; Roget, A; Teoule, R	1
Wainwright, SD	1
Bronk, JR; Hastewell, JG	1
Chiba, Y; Okada, S; Tamemasa, O; Tezuka, M	2
Hara-Yokoyama, M; Horie, N; Kuchino, Y; Miyazawa, T; Nishimura, S; Watanabe, K; Yokoyama, S	1
Altman, S; Schaefer, KP; Söll, D	1
Himeno, H; Ohta, T; Watanabe, K	1
Lothrop, CD; Uziel, M	1
Kersten, H	1
Delk, AS; Nagle, DP; Rabinowitz, JC	1
Cimino, F; Colonna, A; Izzo, P; Salvatore, F; Traboni, C	1
Albani, M; Kersten, H; Männlein, E; Nierhaus, KH; Praisler, R; Wurmbach, P	1
Redfield, AG; Tropp, J	1
Puzo, G; Wiebers, JL	1
Gupta, R; Ihara, M; Kuchino, Y; McCloskey, JA; Nishimura, S; Pang, H; Woese, CR	1
Dingermann, T; Kersten, H; Pistel, F	1
Dubin, DT; Taylor, RH; Varricchio, F	1
Kool, ET; Wang, S	1
Kool, ET; Wang, S; Xu, Y	1
Becker, HF; Florentz, C; Grosjean, H; Motorin, Y; Sissler, M	1
Atkins, JF; Crain, PF; Felden, B; Gesteland, RF; Hanawa, K; Himeno, H; McCloskey, JA; Muto, A	1
Becker, HF; Florentz, C; Giegé, R; Grosjean, H; Motorin, Y	1
Agris, PF; Guenther, R; Koshlap, KM; Malkiewicz, A; Sochacka, E	1
An, H; Cook, PD; Maier, MA; Manoharan, M; Ross, BS; Wang, T	1
Dineshkumar, TK; Thanedar, S; Varshney, U	1
Agarwalla, S; Kealey, JT; Santi, DV; Stroud, RM	1
Byström, AS; Johansson, MJ	1
KAWAKAMI, T; NAITO, T	1
Grosjean, H; Myllykallio, H; Skouloubris, S; Urbonavicius, J	1
Han, M; Ross, BS; Song, Q	1
Shigi, N; Shirouzu, M; Suzuki, T; Terada, T; Watanabe, K; Yokoyama, S	1
Bullinger, D; Fehm, T; Gleiter, CH; Kammerer, B; Laufer, S; Neubauer, H	1
Agrofoglio, LA; Breton, F; Delépée, R; Jégourel, D; Rolland, A; Vidal, R	1
Cui, FL; Du, J; Qu, GR; Yan, YH; Yao, XJ; Zhang, QZ	1
Hou, YM; Perona, JJ	1
Cui, FL; Lu, Y; Qu, GR; Yan, YH; Zhang, QZ	1
Campbell, JL; Finley, J; Lu, Y; O'Connor, M; Persaud, C; Vila-Sanjurjo, A	1
Bode, ML; Brady, D; Gordon, GE; Raseroka, N; Visser, DF	1
Brégeon, D; Desmolaize, B; Douthwaite, S; Fabret, C; Grosjean, H; Rose, S	1
Ren, L; Tang, P; Wang, J; Zheng, G; Zhu, S	1
Lin, Y; Shangguan, J; Su, J; Wang, H; Xie, L; Xiong, J; Yang, Y; Zhang, R; Zhang, W	1
Freire, E; Greenberg, MM; Resendiz, MJ; Schön, A	1
Hirata, A; Hori, H; Ishitani, R; Iwashita, C; Nishimasu, H; Nureki, O; Ochi, A; Tomikawa, C; Yamagami, R; Yamashita, K	1
Hari, Y; Morikawa, T; Obika, S; Osawa, T	1
Arifin, JF; Golen, JA; Rheingold, AL; Wang, S; Wen, X	1
Arya, A; Kumar, R; Kumar, V; Mathur, D; Olsen, CE; Prasad, AK; Saxena, RK; Tyagi, A	1
Greenberg, MM; Sloane, JL	1
Deshpande, PP; Gallagher, WP; Katipally, K; Li, J; Sausker, J	1
Dohi, M; Hari, Y; Matsuda, Y; Obika, S; Osawa, T	1
Berden, G; Frieler, CE; Oomens, J; Rodgers, MT; Wu, RR; Yang, B	1
Asahara, H; Asai, S; Fourmy, D; Hirata, A; Hori, H; Kazayama, A; Shigi, N; Takuma, H; Tomikawa, C; Watanabe, K; Yamagami, R; Yoshizawa, S	1
Helm, M; Tserovski, L	1
Bartosik, K; Leszczynska, G; Sochacka, E	1
Breuker, K; Glasner, H; Micura, R; Riml, C	1
Debnath, TK; Okamoto, A	1
Hari, Y; Hitomi, Y; Ito, Y; Kim, H; Osawa, T; Wakita, S	1
Hussain, S	1
Ferreira, M; Kellner, S; Pereira, M; Pinheiro, MM; Ribeiro, DR; Soares, AR	1
Chen, W; Feng, P	1
Bollmark, M; Honcharenko, D; Karalė, K; Strömberg, R; Stulz, R; Tedebark, U	1
Borrego-Varillas, R; Cerullo, G; Conti, I; Delfino, I; Ganzer, L; Garavelli, M; Jaiswal, VK; Kabaciński, P; Manzoni, C; Nenov, A; Oriana, A; Rivalta, I; Weingart, O	1
Carvalho, JO; de Sousa, FF; Façanha Filho, PF; Freire, PTC; Oliveira Neto, JG; Santos, AO; Silva Filho, JG	1
Kanagawa, T; Koyama, A; Masaki, Y; Seio, K; Tomori, T; Uekusa, K	1
Huang, D; Li, Z; Mao, J; Meng, J; Song, B	1
Chen, M; Chen, X; Gan, L; Gao, S; Herde, M; Liu, X; Lu, Y; Schaarschmidt, F; Sun, Y; Wang, W; Witte, CP; Zhu, C	1

Reviews

4 review(s) available for uridine and ribothymidine

Article	Year
Interrelationships of DNA cycles and melatonin synthesis. Advances in experimental medicine and biology, 1991, Volume: 294 Topics: Animals; Arylamine N-Acetyltransferase; Biological Clocks; Cells, Cultured; Chickens; Choline; Circadian Rhythm; DNA Replication; Fibroblasts; Melatonin; Norepinephrine; Pineal Gland; Rats; Serotonin; Tryptophan; Uridine	1991
On the biological significance of modified nucleosides in tRNA. Progress in nucleic acid research and molecular biology, 1984, Volume: 31 Topics: Adenosine; Animals; Bacterial Physiological Phenomena; Base Sequence; Binding Sites; Biological Evolution; Cell Differentiation; Cell Transformation, Neoplastic; Codon; Guanine; Isopentenyladenosine; Operon; Peptide Chain Elongation, Translational; Peptide Chain Initiation, Translational; Protein Biosynthesis; Ribosomes; RNA, Transfer; Spores, Bacterial; Uridine	1984
Stereochemical mechanisms of tRNA methyltransferases. FEBS letters, 2010, Jan-21, Volume: 584, Issue:2 Topics: Archaea; Bacteria; Cytosine; Methylation; Nitrogen; RNA Processing, Post-Transcriptional; RNA, Transfer; Saccharomyces cerevisiae; tRNA Methyltransferases; Uridine	2010
Catalytic crosslinking-based methods for enzyme-specified profiling of RNA ribonucleotide modifications. Methods (San Diego, Calif.), 2019, 03-01, Volume: 156 Topics: Animals; Azacitidine; Biocatalysis; Cross-Linking Reagents; Escherichia coli Proteins; Fluorouracil; Humans; Immunoprecipitation; Methylation; Methyltransferases; Multienzyme Complexes; Pseudouridine; RNA Processing, Post-Transcriptional; RNA, Messenger; Transcriptome; Uridine	2019

Other Studies

73 other study(ies) available for uridine and ribothymidine

Article	Year
Triazole pyrimidine nucleosides as inhibitors of Ribonuclease A. Synthesis, biochemical, and structural evaluation. Bioorganic & medicinal chemistry, 2012, Dec-15, Volume: 20, Issue:24 Topics: Animals; Cattle; Crystallography, X-Ray; Drug Design; Hydrogen Bonding; Kinetics; Models, Molecular; Molecular Structure; Protein Conformation; Pyrimidine Nucleosides; Ribonuclease, Pancreatic; Triazoles	2012
The methylenetetrahydrofolate-mediated biosynthesis of ribothymidine in the transfer-RNA of Streptococcus faecalis: incorporation of hydrogen from solvent into the methyl moiety. Biochemical and biophysical research communications, 1979, Jan-30, Volume: 86, Issue:2 Topics: Enterococcus faecalis; Mass Spectrometry; RNA, Transfer; Tetrahydrofolates; Tritium; Uridine	1979
Function of modified nucleosides 7-methylguanosine, ribothymidine, and 2-thiomethyl-N6-(isopentenyl)adenosine in procaryotic transfer ribonucleic acid. Journal of bacteriology, 1979, Volume: 140, Issue:2 Topics: Bacillus subtilis; Guanosine; Methylation; Nucleosides; Peptide Chain Initiation, Translational; RNA, Bacterial; RNA, Transfer; Structure-Activity Relationship; Uridine	1979
Role of ribothymidine in mammalian tRNAPhe. Proceedings of the National Academy of Sciences of the United States of America, 1977, Volume: 74, Issue:9 Topics: Animals; Cattle; Humans; Kinetics; Liver; Peptide Biosynthesis; Phenylalanine; Poly U; Protein Biosynthesis; Rats; Ribosomes; RNA, Transfer; RNA, Transfer, Amino Acyl; Species Specificity; Uridine	1977
Tetrahydrofolate-dependent biosynthesis of ribothymidine in transfer ribonucleic acids of Gram-positive bacteria. Journal of bacteriology, 1977, Volume: 129, Issue:1 Topics: Arthrobacter; Bacillus; Corynebacterium; Escherichia coli; Methylation; Ribonucleosides; RNA, Bacterial; RNA, Transfer; Staphylococcus; Streptococcus; Tetrahydrofolates; Trimethoprim; tRNA Methyltransferases; Uridine	1977
In vitro methylation of tobacco mosaic virus RNA with ribothymidine-forming tRNA methyltransferase. Characterization and specificity of the reaction. Biochimica et biophysica acta, 1978, Sep-27, Volume: 520, Issue:2 Topics: Base Sequence; Escherichia coli; Kinetics; Ribonucleases; RNA, Viral; Spermine; Tobacco Mosaic Virus; tRNA Methyltransferases; Uridine	1978
Role of ribothymidine in the thermal stability of transfer RNA as monitored by proton magnetic resonance. Nucleic acids research, 1979, Volume: 6, Issue:4 Topics: Drug Stability; Escherichia coli; Magnetic Resonance Spectroscopy; N-Formylmethionine; Nucleic Acid Conformation; RNA, Transfer; Species Specificity; Thermus; Uridine	1979
Wheat germ tRNAs containing uridine in place of ribothymidine: a characterization of an unusual class of eukaryotic tRNAs. Nucleic acids research, 1978, Volume: 5, Issue:4 Topics: Base Sequence; Glycine; Methylation; Protein Biosynthesis; RNA, Transfer; Threonine; Triticum; Uridine	1978
Biosynthesis of ribothymidine in the transfer RNA of Streptococcus faecalis and Bacillus subtilis. A methylation of RNA involving 5,10-methylenetetrahydrofolate. The Journal of biological chemistry, 1976, Dec-10, Volume: 251, Issue:23 Topics: Bacillus subtilis; Enterococcus faecalis; Kinetics; Ribonucleosides; RNA, Transfer; Species Specificity; Tetrahydrofolates; Uridine; Urine	1976
Effect of ribothymidine in specific eukaryotic tRNAs on their efficiency in in vitro protein synthesis. Nature, 1976, May-13, Volume: 261, Issue:5556 Topics: Cell-Free System; Kinetics; Methylation; Nucleic Acid Conformation; Protein Biosynthesis; Ribonucleosides; RNA, Messenger; RNA, Transfer; Spermine; Structure-Activity Relationship; Triticum; Uridine	1976
Production of 5-methyluridine by immobilized thermostable purine nucleoside phosphorylase and pyrimidine nucleoside phosphorylase from Bacillus stearothermophilus JTS 859. Journal of biotechnology, 1991, Volume: 17, Issue:2 Topics: Bacterial Proteins; Enzymes, Immobilized; Geobacillus stearothermophilus; Half-Life; Hydrogen-Ion Concentration; Inosine; Pentosyltransferases; Purine-Nucleoside Phosphorylase; Pyrimidine Phosphorylases; Temperature; Thymine; Uridine	1991
[Total chemical synthesis of natural transfer RNA]. Comptes rendus de l'Academie des sciences. Serie III, Sciences de la vie, 1992, Volume: 315, Issue:1 Topics: Base Sequence; Molecular Sequence Data; Pseudouridine; RNA-Directed DNA Polymerase; RNA, Transfer, Ala; Uridine	1992
The specificity of pyrimidine nucleoside transport and metabolism by rat jejunum in vitro. The Journal of physiology, 1989, Volume: 408 Topics: Animals; Biological Transport, Active; Deoxyuridine; Intestinal Mucosa; Jejunum; Male; Pyrimidine Nucleosides; Rats; Rats, Inbred Strains; Thymidine; Thymine; Uracil; Uridine	1989
Mechanisms of potentiation of antitumor activity of 5-fluorouracil by ribothymidine in a mouse tumor system. Journal of pharmacobio-dynamics, 1986, Volume: 9, Issue:12 Topics: Animals; Carcinoma, Ehrlich Tumor; Drug Synergism; Fluorouracil; In Vitro Techniques; Liver; Male; Mice; Uridine; Uridine Kinase; Uridine Phosphorylase	1986
Enhancement of antitumor activity of 5-fluorouracil by ribothymidine. Journal of pharmacobio-dynamics, 1986, Volume: 9, Issue:8 Topics: Animals; Antineoplastic Combined Chemotherapy Protocols; Carcinoma, Ehrlich Tumor; Drug Synergism; Fluorouracil; Leukemia P388; Male; Mice; Mice, Inbred Strains; Uridine	1986
Two tRNAIle1 species from an extreme thermophile, Thermus thermophilus HB8: effect of 2-thiolation of ribothymidine on the thermostability of tRNA. Biochemistry, 1985, Oct-08, Volume: 24, Issue:21 Topics: Base Sequence; Drug Stability; Kinetics; Nucleic Acid Conformation; Nucleic Acid Denaturation; RNA, Transfer, Amino Acyl; Thermodynamics; Thermus; Thiouridine; Uridine	1985
Nucleotide modification in vitro of the precursor of transfer RNA of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America, 1973, Volume: 70, Issue:12 Topics: Adenosine; Alkenes; Base Sequence; Escherichia coli; Pseudouridine; Ribonucleases; Ribonucleosides; Ribonucleotides; RNA, Bacterial; RNA, Transfer; Thymidine; tRNA Methyltransferases; Tyrosine; Uridine	1973
Selective utilization of 2-thioribothymidine- and ribothymidine-containing tRNAs by the protein synthetic systems of Thermus thermophilus HB 8 depending on the environmental temperature. Journal of biochemistry, 1984, Volume: 96, Issue:5 Topics: Bacterial Proteins; Centrifugation, Density Gradient; Chromatography, High Pressure Liquid; Polyribosomes; RNA, Bacterial; RNA, Transfer; Temperature; Thermus; Thiouridine; Uridine	1984
Salvage of the modified nucleoside ribothymidine in cultured hamster embryo cells. Biochimica et biophysica acta, 1982, Aug-30, Volume: 698, Issue:2 Topics: Animals; Cricetinae; Embryo, Mammalian; Female; Fibroblasts; Methionine; Pregnancy; RNA; Tritium; Uridine	1982
Methylenetetrahydrofolate-dependent biosynthesis of ribothymidine in transfer RNA of Streptococcus faecalis. Evidence for reduction of the 1-carbon unit by FADH2. The Journal of biological chemistry, 1980, May-25, Volume: 255, Issue:10 Topics: Enterococcus faecalis; Flavin-Adenine Dinucleotide; Methylation; Methyltransferases; Oxidation-Reduction; Ribonucleosides; RNA, Transfer; Species Specificity; Tetrahydrofolates; Uridine	1980
Purification and properties of several transfer RNA methyltransferases from S. typhimurium. Molecular and cellular biochemistry, 1981, Apr-27, Volume: 36, Issue:2 Topics: Chromatography, Ion Exchange; Chromatography, Thin Layer; Guanosine; Kinetics; Molecular Weight; Purine Nucleosides; Salmonella typhimurium; Threonine; tRNA Methyltransferases; Uridine	1981
On the role of ribosylthymine in prokaryotic tRNA function. European journal of biochemistry, 1981, Volume: 114, Issue:2 Topics: Bacterial Proteins; Base Sequence; Escherichia coli; Kinetics; Mutation; Peptide Chain Elongation, Translational; Peptide Elongation Factor Tu; Poly A; Protein Biosynthesis; Ribosomes; RNA, Transfer; Uridine	1981
Environment of ribothymidine in transfer ribonucleic acid studied by means of nuclear Overhauser effect. Biochemistry, 1981, Apr-14, Volume: 20, Issue:8 Topics: Escherichia coli; Magnetic Resonance Spectroscopy; Molecular Conformation; Nucleic Acid Conformation; RNA, Transfer; Saccharomyces cerevisiae; Uridine	1981
Identification of modified nucleosides in intact transfer ribonucleic acid by pyrolysis-electron impact-collisional activation mass spectrometry. Nucleic acids research, 1981, Sep-25, Volume: 9, Issue:18 Topics: Escherichia coli; Guanosine; Mass Spectrometry; Nucleosides; RNA, Transfer; Thiouridine; Uridine	1981
Structure of a modified nucleoside in archaebacterial tRNA which replaces ribosylthymine. 1-Methylpseudouridine. The Journal of biological chemistry, 1982, Apr-10, Volume: 257, Issue:7 Topics: Chromatography, Gas; Gram-Negative Aerobic Bacteria; Mass Spectrometry; Pseudouridine; RNA, Transfer; Uridine	1982
Functional role of ribosylthymine in transfer RNA. Preferential utilization of tRNAs containing ribosylthymine instead of uridine at position 54 in protein synthesis of Dictyostelium discoideum. European journal of biochemistry, 1980, Volume: 104, Issue:1 Topics: Dictyostelium; Fungal Proteins; Polyribosomes; Protein Biosynthesis; Ribonucleosides; RNA, Transfer; Uridine	1980
Hamster mitochondrial transfer RNA lacks T and the universal GUUCG sequence. Biochimica et biophysica acta, 1980, May-30, Volume: 607, Issue:3 Topics: Animals; Base Composition; Base Sequence; Cricetinae; Mitochondria; Oligoribonucleotides; Ribonucleases; RNA, Transfer; Uridine	1980
Origins of the large differences in stability of DNA and RNA helices: C-5 methyl and 2'-hydroxyl effects. Biochemistry, 1995, Mar-28, Volume: 34, Issue:12 Topics: Amides; Base Sequence; DNA; Drug Stability; Hydroxylation; Indicators and Reagents; Macromolecular Substances; Molecular Sequence Data; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligoribonucleotides; Phosphoric Acids; Purines; Pyrimidines; RNA; Structure-Activity Relationship; Thermodynamics; Uridine	1995
Recognition of RNA by triplex formation: divergent effects of pyrimidine C-5 methylation. Bioorganic & medicinal chemistry, 1997, Volume: 5, Issue:6 Topics: Base Sequence; Cytidine; DNA, Circular; DNA, Complementary; Methylation; Methyltransferases; Nucleic Acid Conformation; RNA; RNA, Circular; RNA, Complementary; Substrate Specificity; Uridine	1997
Major identity determinants for enzymatic formation of ribothymidine and pseudouridine in the T psi-loop of yeast tRNAs. Journal of molecular biology, 1997, Dec-12, Volume: 274, Issue:4 Topics: Base Sequence; Conserved Sequence; Intramolecular Lyases; Intramolecular Transferases; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Pseudouridine; RNA, Fungal; RNA, Transfer; RNA, Transfer, Asp; Saccharomyces cerevisiae; Substrate Specificity; tRNA Methyltransferases; Uridine	1997
Presence and location of modified nucleotides in Escherichia coli tmRNA: structural mimicry with tRNA acceptor branches. The EMBO journal, 1998, Jun-01, Volume: 17, Issue:11 Topics: Base Composition; Base Sequence; Chromatography, Liquid; Escherichia coli; Mass Spectrometry; Models, Molecular; Molecular Sequence Data; Molecular Weight; Nucleic Acid Conformation; Oligonucleotides; Pseudouridine; Ribonuclease T1; RNA Processing, Post-Transcriptional; RNA, Bacterial; RNA, Transfer; Uridine	1998
Pseudouridine and ribothymidine formation in the tRNA-like domain of turnip yellow mosaic virus RNA. Nucleic acids research, 1998, Sep-01, Volume: 26, Issue:17 Topics: Base Sequence; Hydro-Lyases; Intramolecular Transferases; Molecular Sequence Data; Nucleic Acid Conformation; Pseudouridine; RNA Processing, Post-Transcriptional; RNA, Transfer; RNA, Viral; Tymovirus; Uridine	1998
A distinctive RNA fold: the solution structure of an analogue of the yeast tRNAPhe T Psi C domain. Biochemistry, 1999, Jul-06, Volume: 38, Issue:27 Topics: Anticodon; Base Sequence; Crystallography, X-Ray; Models, Molecular; Molecular Sequence Data; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Conformation; Pseudouridine; RNA, Fungal; RNA, Transfer, Phe; Saccharomyces cerevisiae; Solutions; Uridine	1999
Synthesis of novel 3'-C-methylene thymidine and 5-methyluridine/cytidine H-phosphonates and phosphonamidites for new backbone modification of oligonucleotides. The Journal of organic chemistry, 2001, Apr-20, Volume: 66, Issue:8 Topics: Anti-Infective Agents; Antineoplastic Agents; Cytidine; Oligonucleotides; Oligonucleotides, Antisense; Organophosphonates; Thymidine; Uridine	2001
The mere lack of rT modification in initiator tRNA does not facilitate formylation-independent initiation in Escherichia coli. Journal of bacteriology, 2001, Volume: 183, Issue:24 Topics: Acylation; Base Sequence; Escherichia coli; Molecular Sequence Data; N-Formylmethionine; Nucleic Acid Conformation; Peptide Chain Initiation, Translational; RNA, Transfer, Met; Uridine	2001
Characterization of the 23 S ribosomal RNA m5U1939 methyltransferase from Escherichia coli. The Journal of biological chemistry, 2002, Mar-15, Volume: 277, Issue:11 Topics: Bacterial Proteins; Cloning, Molecular; Escherichia coli; Methylation; RNA, Ribosomal, 23S; tRNA Methyltransferases; Uridine	2002
Dual function of the tRNA(m(5)U54)methyltransferase in tRNA maturation. RNA (New York, N.Y.), 2002, Volume: 8, Issue:3 Topics: Antigens, Viral; Base Sequence; Blotting, Northern; Cell Survival; Chromatography, High Pressure Liquid; Cloning, Molecular; DNA Primers; Fungal Proteins; Molecular Sequence Data; Mutation; Phenotype; Plasmids; Polymerase Chain Reaction; RNA, Transfer, Ser; Saccharomyces cerevisiae; tRNA Methyltransferases; Uridine	2002
Studies on nucleosides and nucleotides. VI. Syntheses of D-ribosylthymines and D-xylosylthymines. Chemical & pharmaceutical bulletin, 1962, Volume: 10 Topics: Nucleosides; Nucleotides; Thymine; Uridine	1962
Identification of a novel gene encoding a flavin-dependent tRNA:m5U methyltransferase in bacteria--evolutionary implications. Nucleic acids research, 2005, Volume: 33, Issue:13 Topics: Bacillus subtilis; Bacteria; Bacterial Proteins; Escherichia coli; Evolution, Molecular; Flavins; Genes, Bacterial; Genomics; Phylogeny; RNA, Transfer; tRNA Methyltransferases; Uridine	2005
Kilo-scale synthesis process for 2'-O-(2-methoxyethyl)-pyrimidine derivatives. Nucleosides, nucleotides & nucleic acids, 2005, Volume: 24, Issue:5-7 Topics: Boron Compounds; Chemistry, Pharmaceutical; Chromatography; Cytidine; Esters; Hydrolysis; Models, Chemical; Pyridines; Pyrimidines; Uridine	2005
Temperature-dependent biosynthesis of 2-thioribothymidine of Thermus thermophilus tRNA. The Journal of biological chemistry, 2006, Jan-27, Volume: 281, Issue:4 Topics: Adenosine; Adenosine Triphosphate; Bacterial Proteins; Binding Sites; Carbon-Sulfur Lyases; Chromatography, High Pressure Liquid; Culture Media; Cysteine; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Lyases; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Protein Binding; Recombination, Genetic; RNA; RNA Processing, Post-Transcriptional; RNA, Transfer; Sequence Analysis, RNA; Sulfates; Sulfurtransferases; Temperature; Thermus thermophilus; Thiouridine; tRNA Methyltransferases; Uridine	2006
Metabolic signature of breast cancer cell line MCF-7: profiling of modified nucleosides via LC-IT MS coupling. BMC biochemistry, 2007, Nov-29, Volume: 8 Topics: Adenosine; Aminoimidazole Carboxamide; Biomarkers, Tumor; Breast Neoplasms; Cell Line; Cell Line, Tumor; Epithelial Cells; Female; Guanosine; Humans; Imidazoles; Ions; Mammary Glands, Human; Metabolic Networks and Pathways; Ribonucleosides; Ribose; S-Adenosylmethionine; Spectrometry, Mass, Electrospray Ionization; Tandem Mass Spectrometry; Uridine	2007
Molecularly imprinted polymer of 5-methyluridine for solid-phase extraction of pyrimidine nucleoside cancer markers in urine. Bioorganic & medicinal chemistry, 2008, Oct-01, Volume: 16, Issue:19 Topics: Acrylamide; Acrylates; Animals; Biomarkers; Chromatography, High Pressure Liquid; Dogs; Mass Spectrometry; Microscopy, Electron, Scanning; Molecular Imprinting; Neoplasms; Polymers; Propylene Glycols; Pyrimidine Nucleosides; Reproducibility of Results; Sensitivity and Specificity; Solid Phase Extraction; Uridine; Vinyl Compounds	2008
A study on the interaction between 5-Methyluridine and human serum albumin using fluorescence quenching method and molecular modeling. Journal of molecular modeling, 2010, Volume: 16, Issue:2 Topics: Humans; Methods; Models, Molecular; Protein Binding; Serum Albumin; Spectrometry, Fluorescence; Temperature; Thermodynamics; Uridine	2010
[Determination of protein in biological samples by synchronous fluorescence]. Guang pu xue yu guang pu fen xi = Guang pu, 2009, Volume: 29, Issue:9 Topics: Fluorescence; Humans; Indicators and Reagents; Limit of Detection; Molecular Probes; Proteins; Spectrometry, Fluorescence; Temperature; Uridine	2009
Mutagenesis of the modified bases, m(5)U1939 and psi2504, in Escherichia coli 23S rRNA. Biochemical and biophysical research communications, 2010, Feb-05, Volume: 392, Issue:2 Topics: Base Sequence; Escherichia coli; Gene Deletion; Methylation; Methyltransferases; Mutagenesis; Protein Conformation; Ribosome Subunits, Large, Bacterial; RNA, Ribosomal, 23S; Uridine	2010
Defining a process operating window for the synthesis of 5-methyluridine by transglycosylation of guanosine and thymine. Journal of biotechnology, 2011, Jan-10, Volume: 151, Issue:1 Topics: Bacillus; Bioreactors; Glycosylation; Guanosine; Hydrogen-Ion Concentration; Purine-Nucleoside Phosphorylase; Temperature; Thymine; Uridine; Uridine Phosphorylase	2011
A single methyltransferase YefA (RlmCD) catalyses both m5U747 and m5U1939 modifications in Bacillus subtilis 23S rRNA. Nucleic acids research, 2011, Volume: 39, Issue:21 Topics: Amino Acid Sequence; Bacillus subtilis; Bacterial Proteins; Biocatalysis; Methyltransferases; Molecular Sequence Data; RNA, Ribosomal, 23S; Sequence Alignment; Uridine	2011
Two-step efficient synthesis of 5-methyluridine via two thermostable nucleoside phosphorylase from Aeropyrum pernix. Bioorganic & medicinal chemistry letters, 2012, Mar-01, Volume: 22, Issue:5 Topics: Aeropyrum; Enzyme Stability; Guanosine; Industrial Microbiology; Pentosyltransferases; Recombinant Proteins; Temperature; Thymine; Uridine; Uridine Phosphorylase	2012
Improved synthesis of 2'-deoxyadenosine and 5-methyluridine by Escherichia coli using an auto-induction system. World journal of microbiology & biotechnology, 2012, Volume: 28, Issue:2 Topics: Deoxyadenosines; Escherichia coli; Purine-Nucleoside Phosphorylase; Thymidine Phosphorylase; Uridine; Uridine Phosphorylase	2012
Photochemical control of RNA structure by disrupting π-stacking. Journal of the American Chemical Society, 2012, Aug-01, Volume: 134, Issue:30 Topics: Base Sequence; Circular Dichroism; Models, Molecular; Nucleic Acid Conformation; Photolysis; Riboswitch; RNA; Sulfides; Uridine	2012
The tRNA recognition mechanism of folate/FAD-dependent tRNA methyltransferase (TrmFO). The Journal of biological chemistry, 2012, Dec-14, Volume: 287, Issue:51 Topics: Anticodon; Bacterial Proteins; Base Sequence; Electrophoretic Mobility Shift Assay; Enzyme Assays; Flavin-Adenine Dinucleotide; Folic Acid; Gene Expression Regulation, Bacterial; Glycine; Glycine Hydroxymethyltransferase; Kinetics; Models, Biological; Molecular Sequence Data; Mutation; Nucleic Acid Conformation; RNA, Messenger; RNA, Transfer; RNA, Transfer, Phe; Serine; Substrate Specificity; Thermus thermophilus; tRNA Methyltransferases; Uridine	2012
Synthesis and properties of 2'-O,4'-C-ethyleneoxy bridged 5-methyluridine. Organic letters, 2013, Jul-19, Volume: 15, Issue:14 Topics: Circular Dichroism; DNA; Oligonucleotides; Oligonucleotides, Antisense; RNA; Uridine	2013
Antifreeze protein-induced selective crystallization of a new thermodynamically and kinetically less preferred molecular crystal. Chemistry (Weinheim an der Bergstrasse, Germany), 2013, Nov-18, Volume: 19, Issue:47 Topics: Antifreeze Proteins; Calorimetry, Differential Scanning; Crystallization; Crystallography, X-Ray; Kinetics; Molecular Conformation; Temperature; Thermodynamics; Uridine	2013
Chemoenzymatic synthesis of 3'-deoxy-3'-(4-substituted-triazol-1-YL)-5-methyluridine. Nucleosides, nucleotides & nucleic acids, 2013, Volume: 32, Issue:12 Topics: Acylation; Animals; Candida; Click Chemistry; Lipase; Swine; Triazoles; Uridine	2013
Interstrand cross-link and bioconjugate formation in RNA from a modified nucleotide. The Journal of organic chemistry, 2014, Oct-17, Volume: 79, Issue:20 Topics: Cross-Linking Reagents; Nucleotides; Oligonucleotides; Organoselenium Compounds; RNA; Solid-Phase Synthesis Techniques; Uridine	2014
A Claisen approach to 4'-Ed4T. Organic letters, 2015, Jan-02, Volume: 17, Issue:1 Topics: Alkenes; Alkynes; Molecular Structure; Stavudine; Stereoisomerism; Uridine	2015
Synthesis and Properties of the 5-Methyluridine Derivative of 3,4-Dihydro-2H-pyran-Bridged Nucleic Acid (DpNA). The Journal of organic chemistry, 2015, Nov-06, Volume: 80, Issue:21 Topics: Bridged-Ring Compounds; Nucleic Acid Conformation; Oligonucleotides; Oligonucleotides, Antisense; Pyrans; RNA; Uridine	2015
2,4-Dihydroxy and O2 Protonated Tautomers of dThd and Thd Coexist in the Gas Phase: Methylation Alters Protonation Preferences versus dUrd and Urd. Journal of the American Society for Mass Spectrometry, 2016, Volume: 27, Issue:3 Topics: Gases; Isomerism; Mass Spectrometry; Methylation; Models, Molecular; Oxygen; Protons; Thymidine; Uridine	2016
Folate-/FAD-dependent tRNA methyltransferase from Thermus thermophilus regulates other modifications in tRNA at low temperatures. Genes to cells : devoted to molecular & cellular mechanisms, 2016, Volume: 21, Issue:7 Topics: Flavin-Adenine Dinucleotide; Folic Acid; Guanosine; Mutation; RNA, Transfer; Temperature; Thermus thermophilus; tRNA Methyltransferases; Uridine	2016
Diastereoselectivity of 5-Methyluridine Osmylation Is Inverted inside an RNA Chain. Bioconjugate chemistry, 2016, 09-21, Volume: 27, Issue:9 Topics: Organometallic Compounds; Pyridines; Pyrimidines; RNA; Stereoisomerism; Uridine	2016
Post-synthetic conversion of 5-pivaloyloxymethyluridine present in a support-bound RNA oligomer into biologically relevant derivatives of 5-methyluridine. Organic & biomolecular chemistry, 2017, Mar-01, Volume: 15, Issue:9 Topics: Molecular Structure; Oligoribonucleotides; RNA; Uridine	2017
Label-free, direct localization and relative quantitation of the RNA nucleobase methylations m6A, m5C, m3U, and m5U by top-down mass spectrometry. Nucleic acids research, 2017, Jul-27, Volume: 45, Issue:13 Topics: Adenosine; Base Sequence; Cytidine; Ions; Methylation; Molecular Structure; RNA; Spectrometry, Mass, Electrospray Ionization; Spectroscopy, Fourier Transform Infrared; Uridine	2017
Osmium Tag for Post-transcriptionally Modified RNA. Chembiochem : a European journal of chemical biology, 2018, 08-06, Volume: 19, Issue:15 Topics: Cytidine; Isomerism; Mass Spectrometry; Osmium; Oxidation-Reduction; RNA; RNA Processing, Post-Transcriptional; Uridine	2018
Synthesis and hybridizing properties of isoDNAs including 3'-O,4'-C-ethyleneoxy-bridged 5-methyluridine derivatives. Bioorganic & medicinal chemistry, 2018, 08-07, Volume: 26, Issue:14 Topics: Nucleic Acid Conformation; Oligonucleotides; Ultraviolet Rays; Uridine	2018
m International journal of molecular sciences, 2021, Mar-14, Volume: 22, Issue:6 Topics: Humans; Oxidative Stress; Ribonuclease, Pancreatic; RNA Cleavage; RNA Processing, Post-Transcriptional; RNA Stability; RNA, Small Untranslated; RNA, Transfer; Stress, Physiological; tRNA Methyltransferases; Uridine	2021
iRNA-m5U: A sequence based predictor for identifying 5-methyluridine modification sites in Saccharomyces cerevisiae. Methods (San Diego, Calif.), 2022, Volume: 203 Topics: Computational Biology; Saccharomyces cerevisiae; Support Vector Machine; Transcriptome; Uridine	2022
A Study on Synthesis and Upscaling of 2'- Molecules (Basel, Switzerland), 2021, Nov-17, Volume: 26, Issue:22 Topics: Cytidine; Oligonucleotides; Organophosphorus Compounds; Uridine	2021
Tracking excited state decay mechanisms of pyrimidine nucleosides in real time. Nature communications, 2021, 12-14, Volume: 12, Issue:1 Topics: Photochemical Processes; Pyrimidine Nucleosides; Pyrimidines; Solvents; Spectrophotometry, Ultraviolet; Ultraviolet Rays; Uridine; Vibration	2021
Physicochemical properties calculated using DFT method and changes of 5-methyluridine hemihydrate crystals at high temperatures. Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy, 2022, Nov-15, Volume: 281 Topics: Dehydration; Humans; Models, Molecular; Spectroscopy, Fourier Transform Infrared; Spectrum Analysis, Raman; Temperature; Uridine; Water	2022
Synthesis of 2'-O-[3-(N-methylsulfamoyl)propan-1-yl]ribothymidine as a potentially applicable 2'-modified nucleoside for antisense oligonucleotides. Bioorganic & medicinal chemistry, 2022, 11-01, Volume: 73 Topics: Aldehydes; Ethylene Glycol; Mesylates; Nitrogen; Nucleosides; Oligonucleotides; Oligonucleotides, Antisense; Oxygen; Uridine	2022
RNADSN: Transfer-Learning 5-Methyluridine (m International journal of molecular sciences, 2022, Nov-04, Volume: 23, Issue:21 Topics: Neural Networks, Computer; RNA, Messenger; RNA, Transfer; Uridine	2022
Pyrimidine catabolism is required to prevent the accumulation of 5-methyluridine in RNA. Nucleic acids research, 2023, 08-11, Volume: 51, Issue:14 Topics: Animals; Arabidopsis; DNA; Mammals; Pyrimidines; RNA; Thymine; Uridine	2023