Page last updated: 2024-08-17

uridine and anticodon

uridine has been researched along with anticodon in 92 studies

Research

Studies (92)

TimeframeStudies, this research(%)All Research%
pre-199029 (31.52)18.7374
1990's17 (18.48)18.2507
2000's23 (25.00)29.6817
2010's19 (20.65)24.3611
2020's4 (4.35)2.80

Authors

AuthorsStudies
Dirheimer, G; Kuntzel, B; Lane, BG; Tumaitis-Kennedy, TD; Weissenbach, J; Wolff, RE1
Schulman, LH; Stern, L1
Brown, A; Pope, WT; Reeves, RH1
Dirheimer, G; Weissenbach, J1
Ames, BN; Landsberg, R; Neill, RJ; Turnbough, CL1
Hasegawa, T; Ishikura, H1
Goto, T; Kawakami, M; Kondo, T; Nishio, K; Takemura, S1
Berman, HM; Marcu, D; Narayanan, P1
Altman, S1
Quigley, GJ; Rich, A1
Hasegawa, T; Ishikura, H; Murao, K1
Ikeda, K; Mizuno, Y; Tanaka, S1
Ishikura, H; Jia, HT; Matsugi, J; Murao, K1
Desgrès, J; el Adlouni, C; Glasser, AL; Keith, G; Malkiewicz, A; Santos, M; Sochacka, E; Tuite, MF1
Amano, M; Kawakami, M1
Foss, K; Jenkins, RA; McClain, WH; Schneider, J1
Dirheimer, G; Edmonds, CG; Gehrke, CW; Kuo, K; Martin, RP; McCloskey, JA; Sibler, AP1
Desgrès, J; Gehrke, CW; Heyman, T; Keith, G; Kuo, KC; Pochart, P1
Björk, GR; Ericson, JU1
Kuchino, Y1
Miyazawa, T; Yokoyama, S1
Behra, R; Choffat, Y; Kubli, E; Suter, B1
Fukami, T; Goto, T; Kawakami, M; Kondo, T; Takemura, S1
Kawakami, M; Kondo, T; Ogawa, K; Takemura, S2
Ishikura, H; Miyazawa, T; Murao, K; Nishimura, S; Watanabe, T; Yamaizumi, Z; Yokoyama, S1
Miyazawa, T; Nishimura, S; Yamaizumi, Z; Yamamoto, N; Yokoyama, S1
Adamiak, RW; Górnicki, P1
Alzner-DeWeerd, B; Ching, WM; Stadtman, TC1
Iitaka, Y; Morikawa, K; Nishimura, S; Torii, K; Tsuboi, M1
Alzner-DeWeerd, B; Heckman, JE; RajBhandary, UL; Sarnoff, J; Yin, S1
Armstrong, PW; Barrell, BG; Chen, EY; de Bruijn, MH; Eperon, IC; Roe, BA; Schreier, PH; Wong, JF1
Beresten, SF; Kisselev, LL; Mashkova, TD; Mazo, AM; Scheinker, VS1
Anderson, S; Bankier, AT; Barrell, BG; Chen, E; Coulson, AR; de Bruijn, MH; Drouin, J; Eperon, IC; Nierlich, DP; Roe, BA; Sanger, F; Schreier, PH; Smith, AJ; Staden, R; Young, IG1
Lowary, PT; Uhlenbeck, OC; Wittenberg, WL1
Bessho, Y; Hori, H; Inagaki, Y; Kojima, A; Ohama, T; Osawa, S1
Kawai, G; Miyazawa, T; Niimi, T; Nishimura, S; Sakamoto, K; Satoh, T; Sekine, M; Yamaizumi, Z; Yokoyama, S1
Carbon, P; Keith, G; Krol, A; Lescure, A; Sturchler, C1
Hayashi, N; Kawai, G; Muto, Y; Niimi, T; Sakamoto, K; Satoh, T; Sekine, M; Watanabe, K; Watanabe, S; Yokoyama, S1
Okumura, S; Takai, K; Takaku, H; Yokoyama, S1
Auffinger, P; Westhof, E2
Goldman, E; Horie, N; Kuchino, Y; Miyazawa, T; Nishimura, S; Takai, K; Yamaizumi, Z; Yokoyama, S1
Agris, PF; Ansari, G; Ashraf, SS; Guenther, R; Malkiewicz, A; Sochacka, E1
Hosono, K; Okumura, S; Takai, K; Takaku, H; Yokoyama, S1
Agris, PF; Guenther, R; Koshlap, KM; Malkiewicz, A; Sochacka, E1
Agris, PF; Ansari, G; Basti, MM; Cain, RJ; Czerwinska, G; Guenther, RH; Malkiewicz, A; Sochacka, E; Yarian, CS1
Foster, PG; Huang, L; Santi, DV; Stroud, RM1
Ishii, N; Ohta, S; Suzuki, T; Ueda, T; Watanabe, K; Yasukawa, T1
Hang, J; Liu, H; Wong, JT; Xue, H; Yan, X; Zhu, G1
Agris, PF; Cain, R; Czerwinska, G; Guenther, R; Malkiewicz, A; Sochacka, E1
Davis, DR; Durant, PC; Sundaram, M1
Agris, PF; Guenther, R; Malkiewicz, A; Marszalek, M; Miskiewicz, A; Sochacka, E; Yarian, C1
Alfonzo, JD; Crain, PF; Kapushoc, ST; McCloskey, JA; Rozenski, J; Simpson, L1
Saigo, K; Suzuki, T; Wada, T; Watanabe, K1
Kirino, Y; Kurata, S; Ohtsuki, T; Saigo, K; Suzuki, T; Takai, K; Wada, T; Watanabe, K1
Takai, K; Yokoyama, S1
Kurata, S; Ohtsuki, T; Suzuki, T; Watanabe, K1
Farhi, A; Hariri, A; Kashgarian, M; Lifton, RP; Nelson-Williams, C; Petersen, KF; Raja, KM; Scheinman, SJ; Shulman, GI; Toka, HR; Wilson, FH; Zhao, H1
Holt, IJ; Jacobs, HT; Kirino, Y; Marjavaara, SK; Suzuki, T; Watanabe, K; Yasukawa, T1
Kim, KI; McCrate, NE; Nagan, MC; Varner, ME1
Byström, AS; Esberg, A; Huang, B; Johansson, MJ1
Takai, K2
Agris, PF; Dziergowska, A; Malkiewicz, A; Murphy, FV; Ramakrishnan, V; Vendeix, FA; Weixlbaumer, A1
Agris, PF; Dubois, DY; Gustilo, EM; Lapointe, J1
Björk, GR; Byström, AS; Esberg, A; Huang, B; Johansson, MJ1
Kirino, Y; Kurata, S; Ohtsuki, T; Ramakrishnan, V; Shimazaki, T; Suzuki, T; Takai, K; Wada, T; Watanabe, K; Weixlbaumer, A1
Bär, C; Jablonowski, D; Schaffrath, R; Studte, P; Tuite, MF; von der Haar, T; Zink, S1
Inanaga, H; Ito, K; Numata, T; Nureki, O; Osawa, T; Tomita, K1
Dai, Q; Fu, Y; He, C; Pan, T; Ren, J; Zhang, W1
Kondow, A; Miyauchi, K; Shigi, N; Suzuki, T; Takeuchi, N; Watanabe, K; Yamagishi, A; Yokobori, SI1
Hirata, A; Hori, H; Ishitani, R; Iwashita, C; Nishimasu, H; Nureki, O; Ochi, A; Tomikawa, C; Yamagami, R; Yamashita, K1
Alkatib, S; Bock, R; Fleischmann, TT; Matthes, A; Rogalski, M; Ruf, S; Scharff, LB; Schöttler, MA; Seeger, S1
Bartos, P; Kraszewska, K; Nawrot, B; Sochacka, E1
Alfonzo, JD; Helm, M1
Babu, IR; Blum, P; Chan, CT; Dedon, PC; Köhrer, C; Kuwahara, M; Liu, Y; Mandal, D; Rajbhandary, UL; Söll, D; Su, D1
Bavi, RS; Kamble, AS; Kumbhar, BV; Sambhare, SB; Sonawane, KD1
Armengod, ME; Garzón, MJ; Martínez-Zamora, A; Meseguer, S; Moukadiri, I; Navarro-González, C; Prado, S; Ruiz-Partida, R; Villarroya, M1
Byström, AS; Karlsborn, T; Mahmud, AK; Tükenmez, H; Xu, F; Xu, H1
Byström, AS; Esberg, A; Tükenmez, H; Xu, H1
Kimura, S; Miyauchi, K; Sakai, Y; Suzuki, T1
Fandilolu, PM; Kamble, AS; Sambhare, SB; Sonawane, KD1
Byström, AS; Johansson, MJO; Xu, F1
Bruch, A; Glatt, S; Klassen, R; Schaffrath, R; Sokołowski, M1
Gamper, H; Hou, YM; Limbach, PA; Masuda, I; Matsubara, R; Paulines, MJ; Takase, R1
Bhatt, MJ; Farabaugh, PJ; Joshi, K1
Abdel-Fattah, W; Breunig, KD; Glatt, S; Hammermeister, A; Helm, M; Krutyhołowa, R; Reinhardt-Tews, A; Schaffrath, R; Stark, MJR; Zabel, R1
Chattopadhyay, M; Keller, C; Tabor, H1
Gräf, S; Hammann, C; Jablonski, KP; Kellner, S; Klassen, R; Schäck, MA; Schaffrath, R1
Aono, T; Hidaka, M; Ishida, W; Masaki, H; Ogawa, T; Takahashi, K; Terada, T1
Kim, J; Lee, J; Yoo, J1

Reviews

8 review(s) available for uridine and anticodon

ArticleYear
[Natural UAG suppressor glutamine tRNA in retrovirus infected cells].
    Gan to kagaku ryoho. Cancer & chemotherapy, 1989, Volume: 16, Issue:3 Pt 2

    Topics: Adenosine; Animals; Anticodon; Cattle; Codon; Gene Expression Regulation; Genes, Viral; Guanosine; Humans; Mice; Rats; Retroviridae; Retroviridae Infections; RNA, Messenger; RNA, Transfer, Amino Acid-Specific; RNA, Transfer, Gln; Suppression, Genetic; Uridine

1989
[Post-transcriptional modifications of tRNA and molecular mechanism of genetic code decoding].
    Seikagaku. The Journal of Japanese Biochemical Society, 1988, Volume: 60, Issue:12

    Topics: Amino Acids; Anticodon; Codon; Genetic Code; Protein Conformation; RNA Processing, Post-Transcriptional; RNA, Transfer; RNA, Transfer, Amino Acyl; Uridine

1988
Hypermodified nucleosides of tRNA: synthesis, chemistry, and structural features of biological interest.
    Progress in nucleic acid research and molecular biology, 1985, Volume: 32

    Topics: Adenosine; Anticodon; Codon; Guanosine; Indicators and Reagents; Nucleic Acid Conformation; Nucleosides; RNA, Transfer; Structure-Activity Relationship; Uridine

1985
Posttranscriptional RNA Modifications: playing metabolic games in a cell's chemical Legoland.
    Chemistry & biology, 2014, Feb-20, Volume: 21, Issue:2

    Topics: Anticodon; Bacteria; Eukaryotic Cells; Metabolic Networks and Pathways; Nucleic Acid Conformation; RNA; RNA Processing, Post-Transcriptional; RNA, Transfer; Uridine

2014
Modification of the wobble uridine in bacterial and mitochondrial tRNAs reading NNA/NNG triplets of 2-codon boxes.
    RNA biology, 2014, Volume: 11, Issue:12

    Topics: Anticodon; Cell Nucleus; Codon; Escherichia coli; Escherichia coli Proteins; GTP Phosphohydrolases; Mitochondria; Multienzyme Complexes; One-Carbon Group Transferases; Oxidative Phosphorylation; RNA; RNA Processing, Post-Transcriptional; RNA, Mitochondrial; RNA, Transfer, Amino Acid-Specific; Signal Transduction; Uridine

2014
Elongator, a conserved complex required for wobble uridine modifications in eukaryotes.
    RNA biology, 2014, Volume: 11, Issue:12

    Topics: Animals; Anticodon; Arabidopsis; Codon; Genetic Code; Histone Acetyltransferases; Humans; Isoenzymes; Mice; RNA Processing, Post-Transcriptional; RNA-Binding Proteins; RNA, Transfer; Saccharomyces cerevisiae; Schizosaccharomyces; Uridine

2014
Elongator-a tRNA modifying complex that promotes efficient translational decoding.
    Biochimica et biophysica acta. Gene regulatory mechanisms, 2018, Volume: 1861, Issue:4

    Topics: Animals; Anticodon; Codon; Eukaryotic Cells; Gene Expression Regulation, Fungal; Genetic Code; Histone Acetyltransferases; Humans; Models, Genetic; Molecular Structure; Multiprotein Complexes; Protein Biosynthesis; RNA Processing, Post-Transcriptional; RNA, Fungal; RNA, Transfer; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Uridine

2018
Cooperativity between different tRNA modifications and their modification pathways.
    Biochimica et biophysica acta. Gene regulatory mechanisms, 2018, Volume: 1861, Issue:4

    Topics: Animals; Anticodon; Endoribonucleases; Eukaryotic Cells; Humans; Mitochondrial Diseases; Models, Molecular; Multiprotein Complexes; Neoplasms; Nervous System Diseases; Nucleic Acid Conformation; Protein Biosynthesis; RNA Processing, Post-Transcriptional; RNA Stability; RNA-Binding Proteins; RNA, Fungal; RNA, Neoplasm; RNA, Transfer; Saccharomyces cerevisiae Proteins; Schizosaccharomyces pombe Proteins; tRNA Methyltransferases; Uridine

2018

Other Studies

84 other study(ies) available for uridine and anticodon

ArticleYear
Presence of the methylester of 5-carboxymethyl uridine in the wobble position of the anticodon of tRNAIII Arg from brewer's yeast.
    Biochimie, 1975, Volume: 57, Issue:1

    Topics: Anticodon; Arginine; Carbon Radioisotopes; Carboxylic Acids; Chromatography, DEAE-Cellulose; Chromatography, Gas; Chromatography, Paper; Chromatography, Thin Layer; Electrophoresis, Paper; Escherichia coli; Mass Spectrometry; Methylation; Pancreas; Phosphoric Monoester Hydrolases; Ribonucleases; RNA, Transfer; Spectrophotometry, Ultraviolet; Uridine; Yeasts

1975
Role of anticodon bases in aminoacylation of Escherichia coli methionine transfer RNAs.
    The Journal of biological chemistry, 1977, Sep-25, Volume: 252, Issue:18

    Topics: Anticodon; Base Sequence; Cytidine; Escherichia coli; Methionine-tRNA Ligase; N-Formylmethionine; RNA, Transfer; Transfer RNA Aminoacylation; Uridine

1977
The identification of the tRNA substrates for the supK tRNA methylase.
    Nucleic acids research, 1978, Volume: 5, Issue:3

    Topics: Alanine; Anticodon; Hydrolysis; RNA, Bacterial; RNA, Transfer; Salmonella typhimurium; Serine; tRNA Methyltransferases; Uridine

1978
Pairing properties of the methylester of 5-carboxymethyl uridine in the wobble position of yeast tRNA3Arg.
    Biochimica et biophysica acta, 1978, May-23, Volume: 518, Issue:3

    Topics: Anticodon; Arginine; Base Sequence; Binding Sites; Codon; Polyribonucleotides; Protein Biosynthesis; Ribosomes; RNA, Messenger; RNA, Transfer; Saccharomyces cerevisiae; Uridine

1978
Pseudouridylation of tRNAs and its role in regulation in Salmonella typhimurium.
    The Journal of biological chemistry, 1979, Jun-25, Volume: 254, Issue:12

    Topics: Amino Acyl-tRNA Synthetases; Anticodon; Mutation; Pseudouridine; RNA, Transfer; RNA, Transfer, Amino Acyl; Salmonella typhimurium; Uridine

1979
Nucleotide sequence of threonine tRNA from Bacillus subtilis.
    Nucleic acids research, 1978, Volume: 5, Issue:2

    Topics: Anticodon; Bacillus subtilis; Base Sequence; RNA, Bacterial; RNA, Transfer; Threonine; Uridine

1978
5-(Carboxy-hydroxymethyl)uridine, a new modified nucleoside located in the anticodon of tRNA2Gly from the posterior silk glands of Bombyx mori.
    Nucleic acids symposium series, 1979, Issue:6

    Topics: Animals; Anticodon; Bombyx; Glycine; Magnetic Resonance Spectroscopy; Mass Spectrometry; RNA, Transfer; Spectrophotometry, Ultraviolet; Uridine

1979
Modified bases in tRNA: the structures of 5-carbamoylmethyl- and 5-carboxymethyl uridine.
    Nucleic acids research, 1978, Volume: 5, Issue:3

    Topics: Anticodon; Hydrogen Bonding; Structure-Activity Relationship; Uridine; X-Ray Diffraction

1978
A modified uridine in the anticodon of E. coli tRNA I Tyr su + oc.
    Nucleic acids research, 1976, Volume: 3, Issue:2

    Topics: Anticodon; Base Sequence; Chromatography, Thin Layer; Escherichia coli; Ribonucleases; Ribonucleotides; RNA, Transfer; Uridine

1976
Structural domains of transfer RNA molecules.
    Science (New York, N.Y.), 1976, Nov-19, Volume: 194, Issue:4267

    Topics: Anticodon; Hydrogen Bonding; Models, Molecular; Nucleic Acid Conformation; Phenylalanine; Protein Biosynthesis; RNA, Transfer; Saccharomyces cerevisiae; Structure-Activity Relationship; Uridine

1976
5-methoxyuridine: a new minor constituent located in the first position of the anticodon of tRNAAla, tRNAThr, and tRNAVal from Bacillus subtilis.
    Nucleic acids research, 1976, Volume: 3, Issue:10

    Topics: Alanine; Anticodon; Bacillus subtilis; Base Sequence; RNA, Bacterial; RNA, Transfer; Threonine; Uridine; Valine

1976
Syntheses of potential antimetabolites. XX. Syntheses of 5-carbomethoxymethyl- and 5-methylaminomethyl-2-thiouridine (the "first letters" of some anticodons) and closely related nucleosides from uridine.
    Chemical & pharmaceutical bulletin, 1975, Volume: 23, Issue:11

    Topics: Anticodon; Methods; Thiouridine; Uridine

1975
Nucleotide sequences of serine tRNAs from Bacillus subtilis.
    Biochimica et biophysica acta, 1992, Apr-06, Volume: 1130, Issue:3

    Topics: Adenosine; Anticodon; Bacillus subtilis; Base Composition; Base Sequence; Molecular Sequence Data; Nucleic Acid Conformation; RNA, Bacterial; RNA, Transfer, Ser; Uridine

1992
Presence and coding properties of 2'-O-methyl-5-carbamoylmethyluridine (ncm5Um) in the wobble position of the anticodon of tRNA(Leu) (U*AA) from brewer's yeast.
    FEBS letters, 1992, Dec-21, Volume: 314, Issue:3

    Topics: Anticodon; Chromatography, High Pressure Liquid; Fungal Proteins; Mass Spectrometry; Molecular Structure; RNA, Fungal; RNA, Transfer, Leu; Saccharomyces cerevisiae; Spectrophotometry, Ultraviolet; Uridine

1992
Assignment of the magnetic resonances of the imino protons and methyl protons of Bombyx mori tRNA(GlyGCC) and the effect of ion binding on its structure.
    European journal of biochemistry, 1992, Dec-15, Volume: 210, Issue:3

    Topics: Animals; Anticodon; Base Composition; Base Sequence; Bombyx; Codon; Hydrogen Bonding; Magnesium; Magnetic Resonance Spectroscopy; Molecular Sequence Data; Nucleic Acid Conformation; RNA, Transfer, Gly; RNA, Transfer, Phe; Saccharomyces cerevisiae; Spermine; Uridine

1992
Four sites in the acceptor helix and one site in the variable pocket of tRNA(Ala) determine the molecule's acceptor identity.
    Proceedings of the National Academy of Sciences of the United States of America, 1991, Oct-15, Volume: 88, Issue:20

    Topics: Anticodon; Base Sequence; Binding Sites; Escherichia coli; Genes, Bacterial; Guanosine; Models, Structural; Molecular Sequence Data; Mutagenesis, Site-Directed; Nucleic Acid Conformation; RNA, Transfer, Ala; Uridine

1991
5-[[(carboxymethyl)amino]methyl]uridine is found in the anticodon of yeast mitochondrial tRNAs recognizing two-codon families ending in a purine.
    Biochemistry, 1990, Jan-30, Volume: 29, Issue:4

    Topics: Anticodon; Chromatography, High Pressure Liquid; Mass Spectrometry; Mitochondria; Molecular Structure; Purines; RNA, Transfer; RNA, Transfer, Amino Acid-Specific; RNA, Transfer, Leu; RNA, Transfer, Trp; Saccharomyces cerevisiae; Spectrophotometry, Ultraviolet; Uridine

1990
Eukaryotic tRNAs(Pro): primary structure of the anticodon loop; presence of 5-carbamoylmethyluridine or inosine as the first nucleoside of the anticodon.
    Biochimica et biophysica acta, 1990, Jul-30, Volume: 1049, Issue:3

    Topics: Animals; Anticodon; Base Sequence; Cattle; Chickens; Chromatography; Inosine; Molecular Sequence Data; Molecular Structure; Nucleic Acid Conformation; RNA, Fungal; RNA, Transfer; RNA, Transfer, Amino Acid-Specific; RNA, Transfer, Pro; Spectrophotometry, Ultraviolet; Uridine; Yeasts

1990
Pleiotropic effects induced by modification deficiency next to the anticodon of tRNA from Salmonella typhimurium LT2.
    Journal of bacteriology, 1986, Volume: 166, Issue:3

    Topics: Anticodon; Chromatography, Thin Layer; DNA, Bacterial; Mutation; Protein Biosynthesis; Protein Sorting Signals; RNA, Bacterial; RNA, Transfer; RNA, Transfer, Amino Acyl; Salmonella typhimurium; Suppression, Genetic; Uridine

1986
Pseudouridine modification in the tRNA(Tyr) anticodon is dependent on the presence, but independent of the size and sequence, of the intron in eucaryotic tRNA(Tyr) genes.
    Molecular and cellular biology, 1988, Volume: 8, Issue:8

    Topics: Animals; Anticodon; Base Sequence; Drosophila melanogaster; Female; Genes; Introns; Molecular Sequence Data; Mutation; Oocytes; Pseudouridine; RNA, Transfer; RNA, Transfer, Amino Acid-Specific; RNA, Transfer, Tyr; Uridine; Xenopus laevis

1988
Chemical structure of a new modified nucleoside located in the anticodon of Bombyx mori glycine tRNA2.
    Journal of biochemistry, 1988, Volume: 104, Issue:1

    Topics: Animals; Anticodon; Bombyx; Chromatography, Thin Layer; Exoribonucleases; Guanosine; Magnetic Resonance Spectroscopy; Mass Spectrometry; Optical Rotatory Dispersion; RNA, Transfer; RNA, Transfer, Amino Acid-Specific; RNA, Transfer, Gly; Spectrophotometry, Ultraviolet; Uridine

1988
Identification of a modified nucleoside located in the first position of the anticodon of Torulopsis utilis tRNAPro as 5-carbamoylmethyluridine.
    Journal of biochemistry, 1986, Volume: 99, Issue:2

    Topics: Anticodon; Candida; Chromatography; RNA, Fungal; RNA, Transfer; RNA, Transfer, Amino Acyl; Spectrum Analysis; Uridine

1986
Molecular mechanism of codon recognition by tRNA species with modified uridine in the first position of the anticodon.
    Proceedings of the National Academy of Sciences of the United States of America, 1985, Volume: 82, Issue:15

    Topics: Anticodon; Codon; Hydrogen Bonding; Magnetic Resonance Spectroscopy; Nucleic Acid Conformation; RNA, Messenger; RNA, Transfer; Structure-Activity Relationship; Uridine

1985
Modified nucleoside, 5-carbamoylmethyluridine, located in the first position of the anticodon of yeast valine tRNA.
    Journal of biochemistry, 1985, Volume: 97, Issue:1

    Topics: Anticodon; Magnetic Resonance Spectroscopy; Mass Spectrometry; RNA, Fungal; RNA, Transfer; RNA, Transfer, Amino Acyl; Saccharomyces cerevisiae; Spectrophotometry, Ultraviolet; Uridine

1985
A selenium-containing nucleoside at the first position of the anticodon in seleno-tRNAGlu from Clostridium sticklandii.
    Proceedings of the National Academy of Sciences of the United States of America, 1985, Volume: 82, Issue:2

    Topics: Anticodon; Base Sequence; Clostridium; Cyanogen Bromide; Oligonucleotides; Organoselenium Compounds; Ribonuclease T1; RNA, Transfer; RNA, Transfer, Amino Acyl; Selenium; Uridine

1985
Crystal and molecular structure of the methyl ester of uridin-5-oxyacetic acid: a minor constituent of Escherichia coli tRNAs.
    FEBS letters, 1974, Nov-15, Volume: 48, Issue:2

    Topics: Acetates; Anticodon; Crystallography; Escherichia coli; Keto Acids; Models, Molecular; Molecular Conformation; Molecular Weight; RNA, Bacterial; RNA, Transfer; Uridine; X-Ray Diffraction

1974
Novel features in the genetic code and codon reading patterns in Neurospora crassa mitochondria based on sequences of six mitochondrial tRNAs.
    Proceedings of the National Academy of Sciences of the United States of America, 1980, Volume: 77, Issue:6

    Topics: Anticodon; Base Sequence; Codon; DNA, Mitochondrial; Genetic Code; Mitochondria; Neurospora; Neurospora crassa; Nucleic Acid Conformation; RNA, Transfer; Uridine

1980
A modified nucleoside located in the anticodon of proline tRNA from Torulopsis utilis is 5-carbamoylmethyluridine.
    Nucleic acids symposium series, 1983, Issue:12

    Topics: Anticodon; Candida; Magnetic Resonance Spectroscopy; Mass Spectrometry; Proline; RNA, Transfer; Spectrophotometry, Ultraviolet; Uridine

1983
A mammalian mitochondrial serine transfer RNA lacking the "dihydrouridine" loop and stem.
    Nucleic acids research, 1980, Nov-25, Volume: 8, Issue:22

    Topics: Animals; Anticodon; Base Sequence; Cattle; Cloning, Molecular; DNA, Recombinant; Humans; Mitochondria, Liver; Nucleic Acid Conformation; Plasmids; RNA, Transfer, Amino Acyl; Species Specificity; Uridine

1980
Role of exposed cytosine residues in aminoacylation activity of tRNATrp.
    FEBS letters, 1981, Sep-28, Volume: 132, Issue:2

    Topics: Animals; Anticodon; Base Sequence; Cattle; Cytosine; Nucleic Acid Conformation; RNA, Transfer, Amino Acyl; Structure-Activity Relationship; Sulfites; Tryptophan; Tryptophan-tRNA Ligase; Uridine

1981
Different pattern of codon recognition by mammalian mitochondrial tRNAs.
    Proceedings of the National Academy of Sciences of the United States of America, 1980, Volume: 77, Issue:6

    Topics: Animals; Anticodon; Base Sequence; Biological Evolution; Cattle; Codon; Computers; DNA, Mitochondrial; Genetic Code; Humans; Mammals; Mitochondria; RNA, Messenger; RNA, Transfer; Uridine

1980
Role of the constant uridine in binding of yeast tRNAPhe anticodon arm to 30S ribosomes.
    Nucleic acids research, 1982, Jun-11, Volume: 10, Issue:11

    Topics: Anticodon; Kinetics; Oligoribonucleotides; Ribosomes; RNA Ligase (ATP); RNA, Transfer; RNA, Transfer, Amino Acyl; Saccharomyces cerevisiae; Structure-Activity Relationship; T-Phages; Uridine

1982
Translation of synonymous codons in family boxes by Mycoplasma capricolum tRNAs with unmodified uridine or adenosine at the first anticodon position.
    Journal of molecular biology, 1995, Aug-25, Volume: 251, Issue:4

    Topics: Adenosine; Amino Acid Sequence; Anticodon; Base Sequence; Codon; Molecular Sequence Data; Mycoplasma; Protein Biosynthesis; RNA, Fungal; RNA, Transfer; Uridine

1995
A modified uridine in the first position of the anticodon of a minor species of arginine tRNA, the argU gene product, from Escherichia coli.
    European journal of biochemistry, 1993, Sep-01, Volume: 216, Issue:2

    Topics: Anticodon; Chromatography, High Pressure Liquid; Escherichia coli; Magnetic Resonance Spectroscopy; Nucleic Acid Conformation; RNA, Bacterial; RNA, Transfer, Arg; Uridine

1993
Base modification pattern at the wobble position of Xenopus selenocysteine tRNA(Sec).
    Nucleic acids research, 1994, Apr-25, Volume: 22, Issue:8

    Topics: Animals; Anticodon; Base Composition; Base Sequence; Microinjections; Molecular Sequence Data; Mutagenesis; Nucleic Acid Conformation; RNA, Transfer, Amino Acid-Specific; Selenocysteine; Uridine; Xenopus laevis

1994
NMR studies of the effects of the 5'-phosphate group on conformational properties of 5-methylaminomethyluridine found in the first position of the anticodon of Escherichia coli tRNA(Arg)4.
    Biochemistry, 1996, May-28, Volume: 35, Issue:21

    Topics: Anticodon; Computer Graphics; Escherichia coli; Magnetic Resonance Spectroscopy; Models, Molecular; Nucleic Acid Conformation; Ribose; RNA, Transfer, Arg; Thermodynamics; Uridine

1996
Codon recognition by tRNA molecules with a modified or unmodified uridine at the first position of the anticodon.
    Nucleic acids symposium series, 1995, Issue:34

    Topics: Anticodon; Codon; Escherichia coli; Molecular Structure; Nucleic Acid Conformation; RNA, Transfer; RNA, Transfer, Ser; Uridine

1995
RNA hydration: three nanoseconds of multiple molecular dynamics simulations of the solvated tRNA(Asp) anticodon hairpin.
    Journal of molecular biology, 1997, Jun-13, Volume: 269, Issue:3

    Topics: Anticodon; Base Composition; Computer Simulation; Guanine; Hydrogen Bonding; Models, Molecular; Nucleic Acid Conformation; Ribose; RNA, Transfer, Asp; Uridine; Water

1997
Modified nucleosides in the first positions of the anticodons of tRNA(Leu)4 and tRNA(Leu)5 from Escherichia coli.
    Biochemistry, 1999, Jan-05, Volume: 38, Issue:1

    Topics: Anticodon; Base Sequence; Codon; Escherichia coli; Hydrogen-Ion Concentration; Magnetic Resonance Spectroscopy; Mass Spectrometry; Molecular Sequence Data; Nucleoside Q; Protons; Pyrimidine Nucleosides; Ribose; RNA, Transfer, Leu; Spectrophotometry, Ultraviolet; Uridine

1999
The uridine in "U-turn": contributions to tRNA-ribosomal binding.
    RNA (New York, N.Y.), 1999, Volume: 5, Issue:4

    Topics: Anticodon; Humans; Models, Molecular; Molecular Structure; Nucleic Acid Conformation; Nucleic Acid Denaturation; Ribosomes; RNA, Fungal; RNA, Transfer, Phe; Temperature; Uridine

1999
A single uridine modification at the wobble position of an artificial tRNA enhances wobbling in an Escherichia coli cell-free translation system.
    FEBS letters, 1999, Mar-19, Volume: 447, Issue:1

    Topics: Amino Acid Sequence; Anticodon; Base Sequence; Cell-Free System; Codon; Escherichia coli; Models, Genetic; Molecular Sequence Data; Nucleic Acid Conformation; Protein Biosynthesis; RNA, Transfer, Ser; Uridine

1999
A distinctive RNA fold: the solution structure of an analogue of the yeast tRNAPhe T Psi C domain.
    Biochemistry, 1999, Jul-06, Volume: 38, Issue:27

    Topics: Anticodon; Base Sequence; Crystallography, X-Ray; Models, Molecular; Molecular Sequence Data; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Conformation; Pseudouridine; RNA, Fungal; RNA, Transfer, Phe; Saccharomyces cerevisiae; Solutions; Uridine

1999
Structural and functional roles of the N1- and N3-protons of psi at tRNA's position 39.
    Nucleic acids research, 1999, Sep-01, Volume: 27, Issue:17

    Topics: Anticodon; Genes, Fungal; Magnetic Resonance Spectroscopy; Nucleic Acid Conformation; Protons; Pseudouridine; Ribosomes; RNA, Ribosomal, 16S; RNA, Transfer, Phe; Structure-Activity Relationship; Temperature; Thermodynamics; Uridine; Yeasts

1999
The structural basis for tRNA recognition and pseudouridine formation by pseudouridine synthase I.
    Nature structural biology, 2000, Volume: 7, Issue:1

    Topics: Amino Acid Sequence; Anticodon; Aspartic Acid; Binding Sites; Conserved Sequence; Crystallization; Crystallography, X-Ray; Dimerization; Escherichia coli; Hydro-Lyases; Hydrogen Bonding; Models, Molecular; Molecular Sequence Data; Protein Structure, Secondary; Protein Structure, Tertiary; Pseudouridine; RNA-Binding Proteins; RNA, Transfer; Substrate Specificity; Uridine

2000
Defect in modification at the anticodon wobble nucleotide of mitochondrial tRNA(Lys) with the MERRF encephalomyopathy pathogenic mutation.
    FEBS letters, 2000, Feb-11, Volume: 467, Issue:2-3

    Topics: Anticodon; Cell Line; HeLa Cells; Humans; MELAS Syndrome; MERRF Syndrome; Mitochondria; Mitochondrial Myopathies; Mutation; Point Mutation; RNA, Transfer, Leu; RNA, Transfer, Lys; Uridine

2000
NMR studies of Bacillus subtilis tRNA(Trp) hyperexpressed in Escherichia coli. Assignment of imino proton signals and determination of thermal stability.
    The Journal of biological chemistry, 2000, Mar-10, Volume: 275, Issue:10

    Topics: Anticodon; Bacillus subtilis; Base Pairing; Escherichia coli; Magnetic Resonance Spectroscopy; RNA, Transfer, Trp; Temperature; Uridine

2000
Synthesis and properties of uniquely modified oligoribonucleotides: yeast tRNA(Phe) fragments with 6-methyluridine and 5,6-dimethyluridine at site-specific positions.
    Nucleosides, nucleotides & nucleic acids, 2000, Volume: 19, Issue:3

    Topics: Anticodon; Magnetic Resonance Spectroscopy; Methylation; Molecular Conformation; Oligoribonucleotides; Organophosphorus Compounds; RNA, Transfer, Phe; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Uridine; Yeasts

2000
Hypermodified nucleosides in the anticodon of tRNALys stabilize a canonical U-turn structure.
    Biochemistry, 2000, Oct-17, Volume: 39, Issue:41

    Topics: Anticodon; Circular Dichroism; Escherichia coli; Humans; Models, Molecular; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Conformation; Nucleosides; Phosphorus Isotopes; Protons; RNA, Bacterial; RNA, Fungal; RNA, Transfer, Lys; Saccharomyces cerevisiae; Spectrophotometry, Ultraviolet; Structure-Activity Relationship; Sulfur; Thermodynamics; Uridine

2000
Modified nucleoside dependent Watson-Crick and wobble codon binding by tRNALysUUU species.
    Biochemistry, 2000, Nov-07, Volume: 39, Issue:44

    Topics: Adenosine; Anticodon; Binding Sites; Humans; Nucleic Acid Conformation; Protein Binding; Pseudouridine; Ribosomal Proteins; RNA, Ribosomal, 16S; RNA, Transfer, Lys; Structure-Activity Relationship; Thermodynamics; Uridine

2000
An extended structural signature for the tRNA anticodon loop.
    RNA (New York, N.Y.), 2001, Volume: 7, Issue:3

    Topics: Anticodon; Hydrogen Bonding; Models, Chemical; Models, Molecular; Phylogeny; Purines; Pyrimidines; Sequence Analysis, RNA; Uridine

2001
Modification of the universally unmodified uridine-33 in a mitochondria-imported edited tRNA and the role of the anticodon arm structure on editing efficiency.
    RNA (New York, N.Y.), 2002, Volume: 8, Issue:6

    Topics: Anticodon; Base Sequence; Chromatography, Liquid; Mitochondria; Molecular Sequence Data; Nucleic Acid Conformation; RNA Editing; RNA, Transfer, Trp; Spectrometry, Mass, Electrospray Ionization; Sulfhydryl Compounds; Uridine

2002
Taurine as a constituent of mitochondrial tRNAs: new insights into the functions of taurine and human mitochondrial diseases.
    The EMBO journal, 2002, Dec-02, Volume: 21, Issue:23

    Topics: Anticodon; Humans; Mass Spectrometry; Mitochondria; Mitochondrial Diseases; RNA, Transfer; Sequence Analysis, RNA; Taurine; Uridine

2002
Decoding property of C5 uridine modification at the wobble position of tRNA anticodon.
    Nucleic acids research. Supplement (2001), 2003, Issue:3

    Topics: Amino Acid Sequence; Anticodon; Base Sequence; Cell-Free System; Escherichia coli; Protein Biosynthesis; RNA, Transfer; Uridine

2003
Roles of 5-substituents of tRNA wobble uridines in the recognition of purine-ending codons.
    Nucleic acids research, 2003, Nov-15, Volume: 31, Issue:22

    Topics: Anticodon; Codon; Models, Genetic; Protein Biosynthesis; Purine Nucleotides; RNA, Transfer; Thermodynamics; Uridine

2003
Quick two-step RNA ligation employing periodate oxidation.
    Nucleic acids research, 2003, Nov-15, Volume: 31, Issue:22

    Topics: Anticodon; Base Sequence; Mass Spectrometry; Molecular Sequence Data; Nucleic Acid Conformation; Oxidation-Reduction; Periodic Acid; RNA; RNA, Transfer, Leu; Uridine

2003
A cluster of metabolic defects caused by mutation in a mitochondrial tRNA.
    Science (New York, N.Y.), 2004, Nov-12, Volume: 306, Issue:5699

    Topics: Adult; Aging; Anticodon; Body Mass Index; Cluster Analysis; Cytidine; Extrachromosomal Inheritance; Female; Humans; Hypercholesterolemia; Hypertension; Magnesium; Male; Metabolic Syndrome; Middle Aged; Mitochondria; Mitochondria, Muscle; Muscle Fibers, Skeletal; Mutation; Pedigree; Phenotype; RNA; RNA, Mitochondrial; RNA, Transfer, Ile; Syndrome; Thymidine; Uridine

2004
Acquisition of the wobble modification in mitochondrial tRNALeu(CUN) bearing the G12300A mutation suppresses the MELAS molecular defect.
    Human molecular genetics, 2006, Mar-15, Volume: 15, Issue:6

    Topics: Adenosine; Anticodon; Base Sequence; Cell Line, Tumor; Guanosine; Humans; MELAS Syndrome; Molecular Sequence Data; Nucleic Acid Conformation; Point Mutation; RNA; RNA, Mitochondrial; RNA, Transfer, Leu; Suppression, Genetic; Uridine

2006
Molecular dynamics simulations of human tRNA Lys,3 UUU: the role of modified bases in mRNA recognition.
    Nucleic acids research, 2006, Volume: 34, Issue:19

    Topics: Adenosine; Anticodon; Base Pairing; Computer Simulation; Humans; Models, Molecular; Nucleic Acid Conformation; Pseudouridine; RNA, Messenger; RNA, Transfer, Lys; Thiouridine; Threonine; Uridine

2006
Elevated levels of two tRNA species bypass the requirement for elongator complex in transcription and exocytosis.
    Molecular cell, 2006, Oct-06, Volume: 24, Issue:1

    Topics: Anticodon; Chromatin Assembly and Disassembly; Exocytosis; Gene Dosage; Mutation; Peptide Elongation Factors; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Temperature; Transcription, Genetic; Uridine

2006
Possible conformations of 5-aminomethyluridine derivatives recognizing a G at the third position of the codon.
    Nucleic acids symposium series (2004), 2005, Issue:49

    Topics: Anticodon; Base Pairing; Codon; Guanine; Models, Molecular; Nucleic Acid Conformation; Uridine

2005
Mechanism for expanding the decoding capacity of transfer RNAs by modification of uridines.
    Nature structural & molecular biology, 2007, Volume: 14, Issue:6

    Topics: Amino Acid Sequence; Anticodon; Base Pairing; Base Sequence; Codon; Crystallography; Models, Molecular; Molecular Sequence Data; Molecular Structure; RNA, Transfer, Val; Uridine

2007
E. coli glutamyl-tRNA synthetase is inhibited by anticodon stem-loop domains and a minihelix.
    RNA biology, 2007, Volume: 4, Issue:2

    Topics: Anticodon; Base Sequence; Binding Sites; Enzyme Inhibitors; Escherichia coli; Escherichia coli Proteins; Glutamate-tRNA Ligase; Molecular Sequence Data; Nucleic Acid Conformation; RNA, Transfer; Thermodynamics; Transfer RNA Aminoacylation; Uridine

2007
Eukaryotic wobble uridine modifications promote a functionally redundant decoding system.
    Molecular and cellular biology, 2008, Volume: 28, Issue:10

    Topics: Anticodon; Base Sequence; Codon; Genes, Fungal; Plasmids; Protein Biosynthesis; RNA, Fungal; RNA, Transfer; Saccharomyces cerevisiae; Transfer RNA Aminoacylation; Uridine

2008
Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U.G wobble pairing during decoding.
    The Journal of biological chemistry, 2008, Jul-04, Volume: 283, Issue:27

    Topics: Animals; Anticodon; Base Pairing; Crystallography, X-Ray; Escherichia coli K12; Mitochondria; Nucleic Acid Conformation; Ribosomes; RNA, Transfer, Arg; Uridine

2008
tRNA and protein methylase complexes mediate zymocin toxicity in yeast.
    Molecular microbiology, 2008, Volume: 69, Issue:5

    Topics: Anticodon; Drug Resistance, Fungal; Gene Expression Regulation, Fungal; Killer Factors, Yeast; Kluyveromyces; Mutation; Mycotoxins; Peptide Termination Factors; RNA, Transfer; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Suppression, Genetic; tRNA Methyltransferases; Uridine

2008
Conserved cysteine residues of GidA are essential for biogenesis of 5-carboxymethylaminomethyluridine at tRNA anticodon.
    Structure (London, England : 1993), 2009, May-13, Volume: 17, Issue:5

    Topics: Amino Acid Sequence; Anticodon; Bacteria; Bacterial Proteins; Binding Sites; Catalytic Domain; Conserved Sequence; Cysteine; Flavin-Adenine Dinucleotide; Molecular Sequence Data; RNA, Transfer; Uridine

2009
The AlkB domain of mammalian ABH8 catalyzes hydroxylation of 5-methoxycarbonylmethyluridine at the wobble position of tRNA.
    Angewandte Chemie (International ed. in English), 2010, Nov-15, Volume: 49, Issue:47

    Topics: AlkB Homolog 8, tRNA Methyltransferase; Anticodon; Base Sequence; Catalysis; DNA Repair; Humans; Hydroxylation; Methylation; Protein Structure, Tertiary; RNA, Transfer; tRNA Methyltransferases; Uridine

2010
Taurine-containing uridine modifications in tRNA anticodons are required to decipher non-universal genetic codes in ascidian mitochondria.
    The Journal of biological chemistry, 2011, Oct-14, Volume: 286, Issue:41

    Topics: Animals; Anticodon; Mitochondria; RNA; RNA, Mitochondrial; Taurine; Uridine; Urochordata

2011
The tRNA recognition mechanism of folate/FAD-dependent tRNA methyltransferase (TrmFO).
    The Journal of biological chemistry, 2012, Dec-14, Volume: 287, Issue:51

    Topics: Anticodon; Bacterial Proteins; Base Sequence; Electrophoretic Mobility Shift Assay; Enzyme Assays; Flavin-Adenine Dinucleotide; Folic Acid; Gene Expression Regulation, Bacterial; Glycine; Glycine Hydroxymethyltransferase; Kinetics; Models, Biological; Molecular Sequence Data; Mutation; Nucleic Acid Conformation; RNA, Messenger; RNA, Transfer; RNA, Transfer, Phe; Serine; Substrate Specificity; Thermus thermophilus; tRNA Methyltransferases; Uridine

2012
The contributions of wobbling and superwobbling to the reading of the genetic code.
    PLoS genetics, 2012, Volume: 8, Issue:11

    Topics: Anticodon; Base Pairing; Codon; Gene Knockout Techniques; Genetic Code; Genome, Plastid; Hydrogen Bonding; Mutation; Nicotiana; RNA, Transfer; Uridine

2012
Desulfuration of 2-thiouridine with hydrogen peroxide in the physiological pH range 6.6-7.6 is pH-dependent and results in two distinct products.
    Bioorganic & medicinal chemistry letters, 2013, Nov-01, Volume: 23, Issue:21

    Topics: Anticodon; Hydrogen Peroxide; Hydrogen-Ion Concentration; Magnetic Resonance Spectroscopy; RNA, Transfer; Sulfur; Thiouridine; Uridine

2013
Identification and codon reading properties of 5-cyanomethyl uridine, a new modified nucleoside found in the anticodon wobble position of mutant haloarchaeal isoleucine tRNAs.
    RNA (New York, N.Y.), 2014, Volume: 20, Issue:2

    Topics: Anticodon; Base Pairing; Base Sequence; Codon; Escherichia coli; Haloarcula marismortui; Haloferax; Molecular Structure; Point Mutation; Ribosomes; RNA, Archaeal; RNA, Bacterial; RNA, Fungal; RNA, Transfer, Ile; Saccharomyces cerevisiae; Sulfolobus; Transfer RNA Aminoacylation; Uridine

2014
Conformational Preferences of Modified Nucleoside 5-Taurinomethyluridine, τm(5)U Occur at 'wobble' 34th Position in the Anticodon Loop of tRNA.
    Cell biochemistry and biophysics, 2015, Volume: 71, Issue:3

    Topics: Anticodon; Escherichia coli; Hydrogen Bonding; Molecular Conformation; Molecular Dynamics Simulation; Static Electricity; Uridine

2015
The role of wobble uridine modifications in +1 translational frameshifting in eukaryotes.
    Nucleic acids research, 2015, Oct-30, Volume: 43, Issue:19

    Topics: Anticodon; Frameshifting, Ribosomal; RNA, Fungal; RNA, Transfer; Saccharomyces cerevisiae; Thiouridine; Uridine

2015
Biogenesis and growth phase-dependent alteration of 5-methoxycarbonylmethoxyuridine in tRNA anticodons.
    Nucleic acids research, 2016, Jan-29, Volume: 44, Issue:2

    Topics: Amino Acid Sequence; Anticodon; Base Pairing; Codon; Escherichia coli; Gammaproteobacteria; Gene Expression Regulation, Bacterial; Genetic Code; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Ribosomes; RNA, Bacterial; RNA, Transfer; Sequence Alignment; Uridine

2016
Idiosyncratic recognition of UUG/UUA codons by modified nucleoside 5-taurinomethyluridine, τm5U present at 'wobble' position in anticodon loop of tRNALeu: A molecular modeling approach.
    PloS one, 2017, Volume: 12, Issue:4

    Topics: Animals; Anticodon; Codon; Humans; Hydrogen Bonding; Molecular Dynamics Simulation; Protein Biosynthesis; RNA; RNA, Mitochondrial; RNA, Ribosomal; RNA, Transfer, Leu; Uridine

2017
Selective terminal methylation of a tRNA wobble base.
    Nucleic acids research, 2018, 04-20, Volume: 46, Issue:7

    Topics: Anticodon; Base Sequence; Codon; Escherichia coli; Methylation; Nucleic Acid Conformation; RNA, Bacterial; RNA, Transfer; RNA, Transfer, Pro; Uridine

2018
Codon-specific effects of tRNA anticodon loop modifications on translational misreading errors in the yeast Saccharomyces cerevisiae.
    Nucleic acids research, 2018, 11-02, Volume: 46, Issue:19

    Topics: Anticodon; Codon; Genetic Code; Glutamine; Protein Biosynthesis; Protein Processing, Post-Translational; RNA Processing, Post-Transcriptional; RNA, Transfer; Saccharomyces cerevisiae; Uridine

2018
Kti12, a PSTK-like tRNA dependent ATPase essential for tRNA modification by Elongator.
    Nucleic acids research, 2019, 05-21, Volume: 47, Issue:9

    Topics: Adaptor Proteins, Signal Transducing; Adenosine Triphosphatases; Anticodon; Carrier Proteins; Chaetomium; Crystallography, X-Ray; Protein Conformation; Ribosomes; RNA Processing, Post-Transcriptional; RNA, Transfer; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Uridine

2019
Absolute requirement for polyamines for growth of Escherichia coli mutants (mnmE/G) defective in modification of the wobble anticodon of transfer-RNA.
    FEMS microbiology letters, 2019, 05-01, Volume: 366, Issue:10

    Topics: Anticodon; Escherichia coli; Escherichia coli Proteins; GTP Phosphohydrolases; Mutation; One-Carbon Group Transferases; Polyamines; Protein Biosynthesis; RNA, Transfer; Transfer RNA Aminoacylation; Uridine

2019
Eukaryotic life without tQCUG: the role of Elongator-dependent tRNA modifications in Dictyostelium discoideum.
    Nucleic acids research, 2020, 08-20, Volume: 48, Issue:14

    Topics: Anticodon; Codon; Dictyostelium; Gene Deletion; Glutamine; Histone Acetyltransferases; Mutation; Nucleosides; Phylogeny; Protein Biosynthesis; Protozoan Proteins; RNA, Transfer; Uridine

2020
Substrate recognition mechanism of tRNA-targeting ribonuclease, colicin D, and an insight into tRNA cleavage-mediated translation impairment.
    RNA biology, 2021, Volume: 18, Issue:8

    Topics: Anticodon; Bacteriocins; Base Pairing; Binding Sites; Colicins; Escherichia coli; Gene Expression Regulation, Bacterial; Molecular Docking Simulation; Nucleic Acid Conformation; Peptide Elongation Factor Tu; Plasmids; Protein Binding; Protein Biosynthesis; Protein Conformation, alpha-Helical; Protein Conformation, beta-Strand; Protein Interaction Domains and Motifs; Ribosomes; RNA, Bacterial; RNA, Transfer, Arg; Substrate Specificity; Thiouridine; Uridine

2021
The uridine to pseudouridine modification at the wobble position of eukaryotic isoleucine tRNA species is unlikely to induce mistranslation.
    Nucleosides, nucleotides & nucleic acids, 2022, Volume: 41, Issue:2

    Topics: Anticodon; Eukaryota; Isoleucine; Pseudouridine; Uridine

2022
Structural basis for the selective methylation of 5-carboxymethoxyuridine in tRNA modification.
    Nucleic acids research, 2023, 09-22, Volume: 51, Issue:17

    Topics: Anticodon; Escherichia coli; Gram-Negative Bacteria; Gram-Positive Bacteria; Methylation; Nucleic Acid Conformation; RNA, Transfer; Uridine

2023