thymine and potassium permanganate

thymine has been researched along with potassium permanganate in 29 studies

Research

Studies (29)

TimeframeStudies, this research(%)All Research%
pre-19906 (20.69)18.7374
1990's14 (48.28)18.2507
2000's8 (27.59)29.6817
2010's1 (3.45)24.3611
2020's0 (0.00)2.80

Authors

AuthorsStudies
Beatty, LG; Panigrahi, GB; Sadowski, PD1
Pu, WT; Struhl, K1
McCarthy, JG; Rich, A; Williams, LD1
Beato, M; Chalepakis, G; Truss, M1
Akman, SA; Dizdaroglu, M; Doroshow, JH1
Aburatani, H; Gogos, JA; Kafatos, FC; Karayiorgou, M1
McCarthy, JG1
Essigmann, JM; Rouet, P1
Lilius, EM; Raunio, R1
Hayatsu, H; Iida, S2
Duker, NJ; Frenkel, K; Goldstein, MS; Teebor, GW1
Chambers, EJ; Dill, J; Haworth, IS; Kamp, TJ; Mitas, M; Yu, A1
Goosen, N; King, A; Moolenaar, GF; van de Putte, P; Visse, R1
Frederick, CA; McCarthy, JG; Nicolas, A1
Sen, D; Venczel, EA1
Sekiguchi, J; Shuman, S1
Hiasa, H; Marians, KJ1
Arciszewska, LK; Grainge, I; Sherratt, DJ1
Babon, JJ; Cotton, RG; Ellis, TP; Humphrey, KE; Lambrinakos, A1
Déclais, AC; Lilley, DM1
Madhusudan, K; Muniyappa, K; Reddy, MS; Vaze, MB1
Bui, CT; Cotton, RG1
Bui, CT; Cotton, RG; Sam, LA1
Dash, C; Le Grice, SF; Yi-Brunozzi, HY1
Buelow, BD; Champoux, JJ; Paulson, BA; Winshell, J1
Wierzchowski, KL; Łoziński, T1
Brodbelt, JS; Mazzitelli, CL1
Asano, K; Dohno, C; Mukherjee, S; Nakatani, K1

Other Studies

29 other study(ies) available for thymine and potassium permanganate

ArticleYear
The FLP protein contacts both major and minor grooves of its recognition target sequence.
    Nucleic acids research, 1992, Nov-25, Volume: 20, Issue:22

    Topics: 4-Hydroxyaminoquinoline-1-oxide; Base Sequence; Binding Sites; DNA Nucleotidyltransferases; DNA, Fungal; DNA, Single-Stranded; Fungal Proteins; Guanine; Methylation; Molecular Sequence Data; Potassium Permanganate; Restriction Mapping; Saccharomyces cerevisiae; Substrate Specificity; Sulfuric Acid Esters; Thymine

1992
Uracil interference, a rapid and general method for defining protein-DNA interactions involving the 5-methyl group of thymines: the GCN4-DNA complex.
    Nucleic acids research, 1992, Feb-25, Volume: 20, Issue:4

    Topics: Base Sequence; Binding Sites; DNA-Binding Proteins; Fungal Proteins; Molecular Sequence Data; Oligodeoxyribonucleotides; Polymerase Chain Reaction; Potassium Permanganate; Protein Kinases; Saccharomyces cerevisiae Proteins; Thymine; Transcription Factors; Uracil

1992
Chemical reactivity of potassium permanganate and diethyl pyrocarbonate with B DNA: specific reactivity with short A-tracts.
    Biochemistry, 1990, Jun-26, Volume: 29, Issue:25

    Topics: Adenine; Base Sequence; beta-Lactamases; Chemical Phenomena; Chemistry; Diethyl Pyrocarbonate; DNA; DNA Probes; Formates; Molecular Sequence Data; Nucleic Acid Conformation; Phosphoric Monoester Hydrolases; Potassium Permanganate; Promoter Regions, Genetic; Purine Nucleotides; Pyrimidine Nucleotides; Temperature; Thymine; Time Factors

1990
Contacts between steroid hormone receptors and thymines in DNA: an interference method.
    Proceedings of the National Academy of Sciences of the United States of America, 1990, Volume: 87, Issue:18

    Topics: Animals; Base Sequence; Binding Sites; DNA; Mammary Tumor Virus, Mouse; Molecular Sequence Data; Oligodeoxyribonucleotides; Plasmids; Potassium Permanganate; Receptors, Steroid; Restriction Mapping; Thymine; Transfection

1990
Base modifications in plasmid DNA caused by potassium permanganate.
    Archives of biochemistry and biophysics, 1990, Volume: 282, Issue:1

    Topics: Adenine; Cytosine; DNA Damage; Escherichia coli; Gas Chromatography-Mass Spectrometry; Guanine; Mutation; Plasmids; Potassium Permanganate; Thymine

1990
Detection of single base mismatches of thymine and cytosine residues by potassium permanganate and hydroxylamine in the presence of tetralkylammonium salts.
    Nucleic acids research, 1990, Dec-11, Volume: 18, Issue:23

    Topics: Base Composition; Base Sequence; Cytosine; DNA Mutational Analysis; Female; Humans; Hydroxylamine; Hydroxylamines; Male; Molecular Sequence Data; Mutation; Pedigree; Polymerase Chain Reaction; Polymorphism, Genetic; Potassium Permanganate; Quaternary Ammonium Compounds; Thymine

1990
An improvement in thymine specific chemical DNA sequencing.
    Nucleic acids research, 1989, Sep-25, Volume: 17, Issue:18

    Topics: Base Sequence; DNA; Potassium Permanganate; Thymine

1989
Possible role for thymine glycol in the selective inhibition of DNA synthesis on oxidized DNA templates.
    Cancer research, 1985, Volume: 45, Issue:12 Pt 1

    Topics: Coliphages; DNA; DNA Polymerase I; DNA Replication; DNA, Single-Stranded; Escherichia coli; Oxidation-Reduction; Potassium Permanganate; Templates, Genetic; Thymine; Virus Replication

1985
Effect of electron donors and acceptors on alcohol dehydrogenase activity during the growth of Escherichia coli.
    Acta chemica Scandinavica, 1973, Volume: 27, Issue:3

    Topics: Alcohol Oxidoreductases; Aniline Compounds; Ascorbic Acid; Catechols; Colorimetry; Culture Media; Cytosine; Escherichia coli; Glutathione; Histidine; Iodates; Iodine; Nitrates; Oxidation-Reduction; Phenylalanine; Potassium Permanganate; Sulfides; Sulfites; Thymine; Time Factors; Tryptophan

1973
The permanganate oxidation of thymine.
    Biochimica et biophysica acta, 1970, Jul-16, Volume: 213, Issue:1

    Topics: Barbiturates; Carbon Isotopes; Chemical Phenomena; Chemistry; Chromatography, Paper; Glycols; Hydrogen-Ion Concentration; Oxidation-Reduction; Potassium Permanganate; Spectrophotometry; Thymine; Ultraviolet Rays; Urea

1970
The permanganate oxidation of thymidine and thymidylic acid.
    Biochimica et biophysica acta, 1971, Jan-01, Volume: 228, Issue:1

    Topics: Aniline Compounds; Barbiturates; Carbon Isotopes; Chromatography, Paper; Formates; Glycols; Hydrogen-Ion Concentration; Nucleosides; Nucleotides; Oxidation-Reduction; Potassium Permanganate; Tartronates; Thymidine; Thymine; Urea

1971
Identification of the cis-thymine glycol moiety in oxidized deoxyribonucleic acid.
    Biochemistry, 1981, Feb-17, Volume: 20, Issue:4

    Topics: Chemical Phenomena; Chemistry; DNA, Bacterial; Escherichia coli; Oxidation-Reduction; Potassium Permanganate; Thymidine; Thymine

1981
Hairpin properties of single-stranded DNA containing a GC-rich triplet repeat: (CTG)15.
    Nucleic acids research, 1995, Mar-25, Volume: 23, Issue:6

    Topics: Base Composition; Base Sequence; DNA, Single-Stranded; Humans; Hydrogen Bonding; Molecular Sequence Data; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oxidation-Reduction; Potassium Permanganate; Repetitive Sequences, Nucleic Acid; Single-Strand Specific DNA and RNA Endonucleases; Thymine

1995
Protein-DNA interactions and alterations in the DNA structure upon UvrB-DNA preincision complex formation during nucleotide excision repair in Escherichia coli.
    Biochemistry, 1994, Aug-23, Volume: 33, Issue:33

    Topics: Adenosine Triphosphatases; Bacterial Proteins; Base Sequence; Binding Sites; Deoxyribonuclease I; Diethyl Pyrocarbonate; DNA; DNA Damage; DNA Helicases; DNA Repair; DNA-Binding Proteins; Endodeoxyribonucleases; Escherichia coli; Escherichia coli Proteins; Methylation; Molecular Sequence Data; Nucleic Acid Conformation; Oxidation-Reduction; Potassium Permanganate; Structure-Activity Relationship; Thymine

1994
A structural analysis of the bent kinetoplast DNA from Crithidia fasciculata by high resolution chemical probing.
    Nucleic acids research, 1993, Jul-11, Volume: 21, Issue:14

    Topics: Animals; Base Sequence; Crithidia fasciculata; Diethyl Pyrocarbonate; Distamycins; DNA, Circular; DNA, Kinetoplast; DNA, Protozoan; Electrophoresis, Polyacrylamide Gel; Molecular Sequence Data; Nucleic Acid Conformation; Plasmids; Potassium Permanganate; Temperature; Thymine

1993
Parallel and antiparallel G-DNA structures from a complex telomeric sequence.
    Biochemistry, 1993, Jun-22, Volume: 32, Issue:24

    Topics: Base Sequence; Cations, Divalent; Cations, Monovalent; DNA, Fungal; Methylation; Molecular Sequence Data; Nucleic Acid Conformation; Osmolar Concentration; Potassium Permanganate; Saccharomyces; Telomere; Temperature; Thymine

1993
Covalent DNA binding by vaccinia topoisomerase results in unpairing of the thymine base 5' of the scissile bond.
    The Journal of biological chemistry, 1996, Aug-09, Volume: 271, Issue:32

    Topics: Base Sequence; DNA; DNA Topoisomerases, Type I; Hydrolysis; Molecular Probes; Molecular Sequence Data; Oxidation-Reduction; Potassium Permanganate; Protein Binding; Thymine; Vaccinia virus

1996
Mechanism of quinolone action. A drug-induced structural perturbation of the DNA precedes strand cleavage by topoisomerase IV.
    The Journal of biological chemistry, 1997, Apr-04, Volume: 272, Issue:14

    Topics: Binding Sites; DNA; DNA Topoisomerase IV; DNA Topoisomerases, Type II; DNA, Superhelical; Enzyme Inhibitors; Mutagenesis, Site-Directed; Norfloxacin; Nucleic Acid Conformation; Potassium Permanganate; Thymine

1997
Action of site-specific recombinases XerC and XerD on tethered Holliday junctions.
    The EMBO journal, 1997, Jun-16, Volume: 16, Issue:12

    Topics: Bacterial Proteins; Binding Sites; Catalysis; Deoxyribonuclease BamHI; Deoxyribonucleases, Type II Site-Specific; DNA Nucleotidyltransferases; DNA, Bacterial; Edetic Acid; Escherichia coli; Escherichia coli Proteins; Ferrous Compounds; Hydroxyl Radical; Integrases; Nucleic Acid Conformation; Osmium Tetroxide; Oxidants; Potassium Permanganate; Proteins; Recombinases; Substrate Specificity; Thymine

1997
Reactivity of potassium permanganate and tetraethylammonium chloride with mismatched bases and a simple mutation detection protocol.
    Nucleic acids research, 1999, Apr-15, Volume: 27, Issue:8

    Topics: Adenine; Animals; Base Pair Mismatch; Cytidine; Guanine; Mice; Mutagenesis; Osmium Tetroxide; Potassium Permanganate; Tetraethylammonium; Thymine

1999
Extensive central disruption of a four-way junction on binding CCE1 resolving enzyme.
    Journal of molecular biology, 2000, Feb-18, Volume: 296, Issue:2

    Topics: 2-Aminopurine; Base Pairing; Base Sequence; DNA; DNA Footprinting; Endodeoxyribonucleases; Fluorescence; Guanine; Holliday Junction Resolvases; Models, Genetic; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Potassium Permanganate; Recombinant Proteins; Recombination, Genetic; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Spectrometry, Fluorescence; Temperature; Thymine

2000
Binding of SSB and RecA protein to DNA-containing stem loop structures: SSB ensures the polarity of RecA polymerization on single-stranded DNA.
    Biochemistry, 2000, Nov-21, Volume: 39, Issue:46

    Topics: Adenosine Triphosphatases; Binding, Competitive; Deoxyribonucleases, Type II Site-Specific; DNA-Binding Proteins; DNA, Bacterial; DNA, Single-Stranded; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Hydrolysis; Models, Chemical; Nucleic Acid Conformation; Polymers; Potassium Permanganate; Protein Binding; Protein Structure, Secondary; Rec A Recombinases; Thymine

2000
Comparative study of permanganate oxidation reactions of nucleotide bases by spectroscopy.
    Bioorganic chemistry, 2002, Volume: 30, Issue:2

    Topics: Adenine; Cytosine; Guanine; Kinetics; Manganese Compounds; Methods; Oxidation-Reduction; Oxides; Potassium Permanganate; Purines; Pyrimidines; Spectrum Analysis; Thymine; Uracil

2002
UV-visible spectral identification of the solution-phase and solid-phase permanganate oxidation reactions of thymine acetic acid.
    Bioorganic & medicinal chemistry letters, 2004, Mar-08, Volume: 14, Issue:5

    Topics: Acetic Acid; Oxidation-Reduction; Potassium Permanganate; Solutions; Spectrophotometry, Ultraviolet; Thymine

2004
Two modes of HIV-1 polypurine tract cleavage are affected by introducing locked nucleic acid analogs into the (-) DNA template.
    The Journal of biological chemistry, 2004, Aug-27, Volume: 279, Issue:35

    Topics: Base Sequence; Circular Dichroism; DNA; DNA Primers; HIV-1; Hot Temperature; Hydrolysis; Molecular Sequence Data; Nucleic Acids; Oxygen; Potassium Permanganate; Protein Binding; Protein Structure, Tertiary; Purines; Ribonuclease H; RNA; Temperature; Thymine

2004
Requirements for DNA unpairing during displacement synthesis by HIV-1 reverse transcriptase.
    The Journal of biological chemistry, 2004, Dec-17, Volume: 279, Issue:51

    Topics: Base Sequence; Dimerization; DNA; DNA Primers; DNA, Viral; Electrophoresis, Polyacrylamide Gel; Escherichia coli; HIV Reverse Transcriptase; Models, Genetic; Molecular Sequence Data; Mutation; Nucleic Acid Conformation; Oligonucleotides; Potassium Permanganate; Thymine; Time Factors

2004
Mg2+-modulated KMnO4 reactivity of thymines in the open transcription complex reflects variation in the negative electrostatic potential along the separated DNA strands. Footprinting of Escherichia coli RNA polymerase complex at the lambdaP(R) promoter re
    The FEBS journal, 2005, Volume: 272, Issue:11

    Topics: Bacteriophage lambda; Base Sequence; DNA Footprinting; DNA-Directed RNA Polymerases; DNA, Bacterial; Escherichia coli; Magnesium; Molecular Sequence Data; Potassium Permanganate; Promoter Regions, Genetic; Thymine; Transcription, Genetic; Viral Proteins

2005
Probing ligand binding to duplex DNA using KMnO4 reactions and electrospray ionization tandem mass spectrometry.
    Analytical chemistry, 2007, Jun-15, Volume: 79, Issue:12

    Topics: Base Sequence; Benzimidazoles; Binding Sites; Dactinomycin; DNA; Echinomycin; Ethidium; Ligands; Oligonucleotides; Oxidation-Reduction; Pharmaceutical Preparations; Potassium Permanganate; Spectrometry, Mass, Electrospray Ionization; Thymine

2007
Cyclic mismatch binding ligand CMBL4 binds to the 5'-T-3'/5'-GG-3' site by inducing the flipping out of thymine base.
    Nucleic acids research, 2016, 09-06, Volume: 44, Issue:15

    Topics: Absorption, Physicochemical; Binding Sites; DNA; Drug Design; Hydrogen Bonding; Ligands; Macrocyclic Compounds; Molecular Conformation; Naphthyridines; Oxidation-Reduction; Potassium Permanganate; Spectrometry, Fluorescence; Surface Plasmon Resonance; Temperature; Thymine

2016