thymine and 5-formyluracil

thymine has been researched along with 5-formyluracil in 21 studies

Research

Studies (21)

TimeframeStudies, this research(%)All Research%
pre-19901 (4.76)18.7374
1990's6 (28.57)18.2507
2000's9 (42.86)29.6817
2010's4 (19.05)24.3611
2020's1 (4.76)2.80

Authors

AuthorsStudies
Aiba, N; Kawazoe, Y; Okuhara, E; Wakizaka, A1
Bjelland, S; Eftedal, I; Eide, L; Seeberg, E; Stote, R; Time, RW; Volden, G1
Benneche, T; Birkeland, NK; Bjelland, S; Seeberg, E; Volden, G1
Lai, MT; Stubbe, J; Thornburg, LD; Wishnok, JS1
Matsuda, S; Miyabe, I; Saito, I; Sugiyama, H; Yonei, S; Zhang, QM1
Honsho, A; Ide, H; Kobayashi, M; Masaoka, A; Ohyama, Y; Terato, H1
Fukushima, S; Ide, H; Kobayashi, M; Masaoka, A; Ohyama, Y; Terato, H; Yoshida, M1
Kino, K; Matsumoto, Y; Miyabe, I; Sugiyama, H; Yonei, S; Zhang, QM1
Ide, H; Kobayashi, M; Masaoka, A; Ohyama, Y; Terato, H1
Izuta, S; Kasama, T; Ono, A1
Hanaoka, F; Kino, K; Shimizu, Y; Sugasawa, K; Sugiyama, H1
Akamatsu, K; Fujii, K; Yokoya, A1
Sugiyama, H; Takao, M; Yasui, A; Yonei, S; Yonekura, S; Zhang, QM1
Irie, D; Izuta, S; Ono, A1
Gorenstein, DG; Somasunderam, A; Thiviyanathan, V; Volk, DE1
Di Mascio, P; Martinez, GR; Medeiros, MH; Miyamoto, S; Oliveira, MC; Prado, FM; Ronsein, GE1
Hashiguchi, K; Igarashi, K; Kato, S; Moriwaki, T; Yonekura, S; Zhang-Akiyama, QM1
Madugundu, GS; Park, Y; Peoples, AR; Sanche, L; Wagner, JR1
Balasubramanian, S; Hardisty, RE; Kawasaki, F; Sahakyan, AB1
Ding, J; Li, W; Zhang, T1
Francés-Monerris, A; Lhiaubet-Vallet, V; Lineros-Rosa, M; Miranda, MA; Monari, A1

Other Studies

21 other study(ies) available for thymine and 5-formyluracil

ArticleYear
Production of 5-formyluracil from thymine in an in vitro active oxygen-generating system.
    Biochemistry international, 1987, Volume: 14, Issue:2

    Topics: Ascorbic Acid; Chromatography, High Pressure Liquid; Edetic Acid; Ferrous Compounds; Gas Chromatography-Mass Spectrometry; Oxidation-Reduction; Oxygen; Spectrophotometry, Ultraviolet; Thymine; Uracil

1987
Oxidation of thymine to 5-formyluracil in DNA: mechanisms of formation, structural implications, and base excision by human cell free extracts.
    Biochemistry, 1995, Nov-14, Volume: 34, Issue:45

    Topics: Base Composition; Cell Extracts; Chromatography, High Pressure Liquid; DNA; DNA Glycosylases; DNA Repair; Humans; Kinetics; Leukocytes, Mononuclear; Molecular Structure; Mutagenesis; N-Glycosyl Hydrolases; Oxidation-Reduction; Pentoxyl; Photolysis; Thymine; Ultraviolet Rays; Uracil; Vitamin K

1995
DNA glycosylase activities for thymine residues oxidized in the methyl group are functions of the AlkA enzyme in Escherichia coli.
    The Journal of biological chemistry, 1994, Dec-02, Volume: 269, Issue:48

    Topics: Adenine; Chromatography, Gel; Chromatography, High Pressure Liquid; Chromatography, Ion Exchange; DNA Glycosylases; DNA, Bacterial; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Genes, Bacterial; Kinetics; N-Glycosyl Hydrolases; Oxidation-Reduction; Thymine; Uracil

1994
A non-heme iron protein with heme tendencies: an investigation of the substrate specificity of thymine hydroxylase.
    Biochemistry, 1993, Dec-21, Volume: 32, Issue:50

    Topics: Amino Acid Sequence; Carboxylic Acids; Catalysis; Heme; Hydroxylation; Iron; Kinetics; Metalloproteins; Mixed Function Oxygenases; Molecular Sequence Data; Neurospora crassa; Nonheme Iron Proteins; Oxidation-Reduction; Rhodotorula; Stereoisomerism; Substrate Specificity; Thymine; Uracil

1993
Replication of DNA templates containing 5-formyluracil, a major oxidative lesion of thymine in DNA.
    Nucleic acids research, 1997, Oct-15, Volume: 25, Issue:20

    Topics: Base Composition; Deoxycytidine Monophosphate; DNA; DNA Polymerase I; DNA Primers; DNA Replication; Exodeoxyribonuclease V; Exodeoxyribonucleases; Mutagens; Oxidation-Reduction; Templates, Genetic; Thymine; Uracil

1997
Enzymatic repair of 5-formyluracil. I. Excision of 5-formyluracil site-specifically incorporated into oligonucleotide substrates by alka protein (Escherichia coli 3-methyladenine DNA glycosylase II).
    The Journal of biological chemistry, 1999, Aug-27, Volume: 274, Issue:35

    Topics: Adenine; Base Pair Mismatch; DNA Damage; DNA Glycosylases; DNA Repair; Escherichia coli; Guanine; Kinetics; Magnetic Resonance Spectroscopy; Methylnitronitrosoguanidine; Molecular Structure; N-Glycosyl Hydrolases; Oligodeoxyribonucleotides; Pentoxyl; Substrate Specificity; Thymine; Uracil

1999
Enzymatic repair of 5-formyluracil. II. Mismatch formation between 5-formyluracil and guanine during dna replication and its recognition by two proteins involved in base excision repair (AlkA) and mismatch repair (MutS).
    The Journal of biological chemistry, 1999, Aug-27, Volume: 274, Issue:35

    Topics: Adenine; Adenosine Triphosphatases; Bacterial Proteins; Base Pair Mismatch; DNA Glycosylases; DNA Repair; DNA Replication; DNA-Binding Proteins; Escherichia coli Proteins; Guanine; Kinetics; MutS DNA Mismatch-Binding Protein; N-Glycosyl Hydrolases; Oligodeoxyribonucleotides; Thymine; Uracil

1999
Identification of repair enzymes for 5-formyluracil in DNA. Nth, Nei, and MutM proteins of Escherichia coli.
    The Journal of biological chemistry, 2000, Nov-10, Volume: 275, Issue:45

    Topics: Borohydrides; Deoxyribonuclease (Pyrimidine Dimer); DNA; DNA Glycosylases; DNA Repair; DNA-Formamidopyrimidine Glycosylase; Electrophoresis, Polyacrylamide Gel; Endodeoxyribonucleases; Escherichia coli; Escherichia coli Proteins; Glutathione Transferase; Mutagenesis, Site-Directed; Mutation; N-Glycosyl Hydrolases; Oligonucleotides; Plasmids; Radiation, Ionizing; Thymine; Uracil

2000
Oxidation of thymine to 5-formyluracil in DNA promotes misincorporation of dGMP and subsequent elongation of a mismatched primer terminus by DNA polymerase.
    The Journal of biological chemistry, 2001, May-11, Volume: 276, Issue:19

    Topics: Base Pair Mismatch; Base Sequence; Deoxyguanine Nucleotides; DNA; DNA Polymerase I; DNA Repair; DNA Replication; Escherichia coli; Kinetics; Oligodeoxyribonucleotides; Oxidation-Reduction; Templates, Genetic; Thymine; Uracil

2001
Binding activity of replication protein A to single-stranded DNA containing oxidized pyrimidine base.
    Nucleic acids research. Supplement (2001), 2001, Issue:1

    Topics: Animals; Base Sequence; Binding Sites; DNA Damage; DNA-Binding Proteins; DNA, Single-Stranded; Oligonucleotides; Oxidation-Reduction; Pentoxyl; Pyrimidines; Replication Protein A; Thymine; Uracil; Xenopus laevis

2001
Nucleotide excision repair of 5-formyluracil in vitro is enhanced by the presence of mismatched bases.
    Biochemistry, 2004, Mar-16, Volume: 43, Issue:10

    Topics: Base Pair Mismatch; Cell-Free System; DNA Repair; DNA Repair Enzymes; DNA-Binding Proteins; DNA, Circular; Electrophoretic Mobility Shift Assay; Humans; Protein Binding; Thymine; Uracil; Xeroderma Pigmentosum

2004
Qualitative and quantitative analyses of the decomposition products that arise from the exposure of thymine to monochromatic ultrasoft X rays and 60Co gamma rays in the solid state.
    Radiation research, 2004, Volume: 161, Issue:4

    Topics: Calibration; Chromatography, High Pressure Liquid; Cobalt Radioisotopes; DNA; DNA Damage; DNA Repair; Dose-Response Relationship, Radiation; Gamma Rays; Models, Chemical; Nitrogen; Oxygen; Pentoxyl; Photons; Spectrophotometry; Synchrotrons; Thymine; Time Factors; Uracil; X-Rays

2004
DNA glycosylase activities for thymine residues oxidized in the methyl group are functions of the hNEIL1 and hNTH1 enzymes in human cells.
    DNA repair, 2005, Jan-02, Volume: 4, Issue:1

    Topics: Cloning, Molecular; Deoxyribonuclease (Pyrimidine Dimer); DNA Glycosylases; DNA Repair; DNA, Complementary; Escherichia coli; Humans; Hydrogen Peroxide; Mutation; Oligonucleotides; Pentoxyl; Thymine; Uracil

2005
Recognition of oxidized thymine base on the single-stranded DNA by replication protein A.
    Nucleosides, nucleotides & nucleic acids, 2006, Volume: 25, Issue:4-6

    Topics: Animals; Base Sequence; Binding Sites; DNA, Single-Stranded; Oxidation-Reduction; Replication Protein A; Staining and Labeling; Thymine; Uracil; Xenopus laevis; Xenopus Proteins

2006
Ab initio base-pairing energies of an oxidized thymine product, 5-formyluracil, with standard DNA bases at the BSSE-free DFT and MP2 theory levels.
    Organic & biomolecular chemistry, 2007, May-21, Volume: 5, Issue:10

    Topics: Base Pairing; Calibration; DNA; Hydrogen Bonding; Models, Chemical; Models, Theoretical; Mutagens; Nucleic Acid Conformation; Oxygen; Software; Thermodynamics; Thymidine; Thymine; Uracil

2007
Thymine hydroperoxide as a potential source of singlet molecular oxygen in DNA.
    Free radical biology & medicine, 2009, Aug-15, Volume: 47, Issue:4

    Topics: Anthracenes; DNA; Hydrogen Peroxide; Infrared Rays; Metals; Peroxides; Singlet Oxygen; Sodium Azide; Spectrum Analysis; Sulfonic Acids; Thymine; Uracil

2009
Structural and functional properties of CiNTH, an endonuclease III homologue of the ascidian Ciona intestinalis: critical role of N-terminal region.
    Genes & genetic systems, 2012, Volume: 87, Issue:2

    Topics: Amino Acid Sequence; Animals; Ciona intestinalis; Deoxyribonuclease (Pyrimidine Dimer); DNA; DNA Damage; DNA Glycosylases; DNA Repair; Escherichia coli; Gene Expression Regulation; Guanine; Humans; Hydrogen Peroxide; Molecular Sequence Data; Reactive Oxygen Species; Sequence Alignment; Thymine; Uracil

2012
Side-by-side comparison of DNA damage induced by low-energy electrons and high-energy photons with solid TpTpT trinucleotide.
    The journal of physical chemistry. B, 2013, Sep-05, Volume: 117, Issue:35

    Topics: Chromatography, High Pressure Liquid; DNA Damage; Electrons; Oligonucleotides; Pentoxyl; Photons; Radiation, Ionizing; Tandem Mass Spectrometry; Thymine; Uracil

2013
Selective Chemical Labeling of Natural T Modifications in DNA.
    Journal of the American Chemical Society, 2015, Jul-29, Volume: 137, Issue:29

    Topics: Base Sequence; DNA; Models, Molecular; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Pentoxyl; Thymine; Uracil

2015
Molecular basis for the substrate specificity and catalytic mechanism of thymine-7-hydroxylase in fungi.
    Nucleic acids research, 2015, Nov-16, Volume: 43, Issue:20

    Topics: Biocatalysis; Catalytic Domain; Fungal Proteins; Ketoglutaric Acids; Mixed Function Oxygenases; Mutagenesis; Neurospora crassa; Pentoxyl; Protein Binding; Substrate Specificity; Thymine; Uracil

2015
Experimental and theoretical studies on thymine photodimerization mediated by oxidatively generated DNA lesions and epigenetic intermediates.
    Physical chemistry chemical physics : PCCP, 2020, Nov-18, Volume: 22, Issue:44

    Topics: Cytosine; Dimerization; DNA Damage; Epigenesis, Genetic; Oxidation-Reduction; Photochemistry; Sunlight; Thymine; Ultraviolet Rays; Uracil

2020