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thymidine 5'-triphosphate and 2'-deoxyadenosine triphosphate

thymidine 5'-triphosphate has been researched along with 2'-deoxyadenosine triphosphate in 89 studies

Research

Studies (89)

TimeframeStudies, this research(%)All Research%
pre-199029 (32.58)18.7374
1990's17 (19.10)18.2507
2000's26 (29.21)29.6817
2010's14 (15.73)24.3611
2020's3 (3.37)2.80

Authors

AuthorsStudies
Chawla, RR; Hampton, A; Kappler, F1
Andersson, J; Larsson, KM; Logan, DT; Nordlund, P; Sjöberg, BM1
Amblard, F; Bassit, L; Bondada, L; Coats, SJ; Detorio, M; Grier, J; Hernandez-Santiago, BI; Koontz, D; Mellors, JW; Rapp, KL; Schinazi, RF; Sluis-Cremer, N1
Meanwell, NA1
Fuchs, JA; Manwaring, JD1
Furman, PA; Hopkins, S; Painter, GR; Wright, LL1
Bianchi, V; Pontis, E; Reichard, P2
Kwok, JB; Tattersall, MH1
Brumley, J; Hayman, RJ; Rose, IS; van der Weyden, MB1
Bevan, IS; Day, PJ; Gurney, SJ; Walker, MR; Young, LS1
Kornberg, A; O'Donnell, ME1
Schroeder, AL; Srivastava, VK1
Fyfe, JA; Sherman, PA1
Frick, LW; Nelson, DJ1
Eriksson, S; Skog, S; Tribukait, B; Wallström, B1
Andersson, M; Lewan, L1
Lagergren, J; Reichard, P1
Carlquist, M; Eriksson, S; Jörnvall, H; Sjöberg, BM1
Reichard, P; Söderman, K1
Lecomte, P; Ninio, J; Papanicolaou, C1
Fox, RM1
Bestwick, RK; Mathews, CK; Moffett, GL1
Furman, PA; Lambe, CU; Nelson, DJ1
Tanaka, K; Tanaka, S; Wataya, Y; Yoshioka, A1
Eriksson, S1
Biswas, SB; Kornberg, A1
Jackson, RC1
Ikegami, S; Nagano, H; Okano, K1
Daikuhara, Y; Gohda, E; Inoue, H; Kato, Y; Takeda, Y; Takigawa, M1
Snyder, RD1
Cory, JG; Sato, A1
Ganeshaguru, K; Hoffbrand, AV; Lee, N; Piga, A; Prentice, HG; Russell, NH; Smyth, JF1
Caras, IW; Martin, DW1
Bestwick, RK; Mathews, CK1
Benkovic, SJ; Frey, MW; Millar, DP; Sowers, LC1
Collins, MK; López-Rivas, A; Marvel, J; Oliver, FJ1
Rappaport, HP1
Avidan, O; Bakhanashvili, M; Hizi, A1
Alur, P; Dornadula, G; Laughlin, MA; Pomerantz, RJ; Zhang, H1
Arzumanov, AA; Dyatkina, NB; Gosselin, G; Imbach, JL; Krayevsky, AA; Meyer, A; Rayner, B; Semizarov, DG; Vichier-Guerre, S1
Meuth, M1
Bielefeldt-Ohmann, H; Fitzpatrick, DR1
Fujikawa, K; Kamiya, H; Kasai, H1
Bewley, J; Chen, VJ; Gates, SB; Habeck, LL; Mendelsohn, LG; Ray, J; Shackelford, KA; Tonkinson, JL; Toth, JE1
Harwood, FG; Houghton, JA; Tillman, DM1
Bogue, M; Meek, K; Mickelsen, S; Roth, DB; Snyder, C; Trujillo, K1
Kumari, D; Usdin, K1
Enger, MD; Gurley, LR; Ratliff, RL; Tobey, RA; Walters, RA1
Heeger, P; Mynatt, RL; Truett, AA; Truett, GE; Walker, JA; Warman, ML1
Berger, M; McMinn, DL; Ogawa, AK; Romesberg, FE; Schultz, PG; Wu, Y1
Ishikawa, F; Saito, M; Saneyoshi, M; Shudo, K; Tomikawa, A; Yamada, R; Yamaguchi, T1
Alekseyev, YO; Dzantiev, L; Kool, ET; Morales, JC; Romano, LJ1
Amin, S; Geacintov, NE; Kolbanovskiy, A; Zhuang, P1
Dunlap, CA; Tsai, MD1
Collins, S; Gerard, GF; Smith, MD1
Cooperman, BS; Kashlan, OB1
Bassett, E; Chaney, SG; Gauger, M; Havener, JM; Nick McElhinny, SA; Ramsden, DA1
Eklund, H; Eliasson, R; Färnegårdh, M; Jordan, A; Uhlin, U; Uppsten, M1
Mathews, CK; Song, S; Wheeler, LJ1
Barroso, JF; Elholm, M; Flatmark, T1
Dong, Y; Fiala, KA; Roettger, MP; Sompalli, S; Suo, Z1
Konigsberg, W; Wang, J; Yang, G1
Hayakawa, H; Ishibashi, T; Ito, R; Sekiguchi, M1
Hamby, K; Persson, K; Ugozzoli, LA1
Broyde, S; Patel, DJ; Rechkoblit, O; Shapiro, R; Wang, L; Zhang, L1
Bernardi, P; Bianchi, V; Ferraro, P; Nicolosi, L; Reichard, P1
Boes, C; Fearnley, IM; Harbour, ME; Kunji, ER; Monné, M; Robinson, AJ1
Chilkoti, A; Chow, DC1
Chi, LM; Lam, SL1
Arakawa, H; Kamahori, M; Kambara, H; Karasawa, K; Maeda, M; Munakata, E; Obinata, R; Suzuki, S1
Broyde, S; Donny-Clark, K1
Radivoyevitch, T1
Abdulovic, AL; Chabes, A; Kumar, D; Kunkel, TA; Nilsson, AK; Viberg, J1
Christodoulou, E; Crow, YJ; de Carvalho, LP; Ennis-Adeniran, V; Goldstone, DC; Groom, HC; Haire, LF; Hedden, JJ; Kelly, G; Rice, GI; Stoye, JP; Taylor, IA; Walker, PA; Webb, M; Yap, MW1
Elber, R; Johnson, KA; Kirmizialtin, S; Nguyen, V1
Kore, AR; Senthilvelan, A; Shanmugasundaram, M; Srinivasan, B1
Cho, BP; Vaidyanathan, VG; Xu, L1
Allen, WJ; Felekyan, S; Kalinin, S; Rothwell, PJ; Seidel, CA; Sisamakis, E; Waksman, G; Widengren, J1
Cafarelli, TM; Godoy, VG; Rands, TJ1
Fijalkowska, IJ; Gawel, D; Jonczyk, P; Schaaper, RM1
Buckland, RJ; Chabes, A; Chittoor, B; Kunkel, TA; Nilsson, AK; Watt, DL1
Creech, A; Loechler, EL; Sholder, G1
Anderson, PL; Bushman, LR; Castillo-Mancilla, JR; Chen, X; MaWhinney, S; McAllister, KB; Seifert, SM; Zheng, JH1
Anderson, PL; Bushman, LR; Chen, X; Klein, B; McAllister, KJ1
Wetmore, SD; Wilson, KA1
Chang, ZF; González-Pacanowska, D; Huang, CY; Yagüe-Capilla, M1
Calcuttawala, F; Das Gupta, SK; Ghosh, S; Mukherjee, N; Patra, MM; Sarkar, A; Shaw, R1
Dubovskaja, V; Jasponė, A; Kapustina, Ž; Lubys, A; Mackevičius, G1

Reviews

2 review(s) available for thymidine 5'-triphosphate and 2'-deoxyadenosine triphosphate

ArticleYear
Changes in deoxynucleoside triphosphate pools induced by inhibitors and modulators of ribonucleotide reductase.
    Pharmacology & therapeutics, 1985, Volume: 30, Issue:1

    Topics: Animals; Aziridines; Cells, Cultured; Deoxyadenine Nucleotides; Deoxyguanine Nucleotides; Humans; Hydroxyurea; Ribonucleotide Reductases; Substrate Specificity; T-Lymphocytes; Thiosemicarbazones; Thymine Nucleotides

1985
A kinetic model of regulation of the deoxyribonucleoside triphosphate pool composition.
    Pharmacology & therapeutics, 1984, Volume: 24, Issue:2

    Topics: Animals; Antimetabolites; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleosides; Deoxyribonucleotides; DNA; Humans; Kinetics; Liver Neoplasms, Experimental; Models, Biological; Nucleic Acid Synthesis Inhibitors; Ribonucleoside Diphosphate Reductase; Thermodynamics; Thymidylate Synthase; Thymine Nucleotides

1984

Trials

1 trial(s) available for thymidine 5'-triphosphate and 2'-deoxyadenosine triphosphate

ArticleYear
Analysis of the Endogenous Deoxynucleoside Triphosphate Pool in HIV-Positive and -Negative Individuals Receiving Tenofovir-Emtricitabine.
    Antimicrobial agents and chemotherapy, 2016, Volume: 60, Issue:9

    Topics: Adult; Anti-HIV Agents; Case-Control Studies; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Emtricitabine; Female; HIV Infections; HIV-1; Humans; Leukocytes, Mononuclear; Linear Models; Male; Tenofovir; Thymine Nucleotides

2016

Other Studies

86 other study(ies) available for thymidine 5'-triphosphate and 2'-deoxyadenosine triphosphate

ArticleYear
Design of species- or isozyme-specific enzyme inhibitors. 1. Effect of thymidine substituents on affinity for the thymidine site of hamster cytoplasmic thymidine kinase.
    Journal of medicinal chemistry, 1979, Volume: 22, Issue:6

    Topics: Animals; Cricetinae; Cytoplasm; Deoxycytidine; Deoxyuridine; Humans; In Vitro Techniques; Isoenzymes; Kidney; Kinetics; Methods; Mitochondria; Structure-Activity Relationship; Substrate Specificity; Thymidine; Thymidine Kinase; Thymine Nucleotides

1979
Structural basis for allosteric substrate specificity regulation in anaerobic ribonucleotide reductases.
    Structure (London, England : 1993), 2001, Volume: 9, Issue:8

    Topics: Allosteric Site; Amino Acid Sequence; Binding Sites; Crystallography, X-Ray; Deoxyribonucleotides; Evolution, Molecular; Hydrogen Bonding; Models, Molecular; Molecular Sequence Data; Polyphosphates; Protein Binding; Protein Conformation; Ribonucleotide Reductases; Sequence Homology, Amino Acid; Substrate Specificity

2001
Anti-human immunodeficiency virus activity, cross-resistance, cytotoxicity, and intracellular pharmacology of the 3'-azido-2',3'-dideoxypurine nucleosides.
    Antimicrobial agents and chemotherapy, 2009, Volume: 53, Issue:9

    Topics: Anti-HIV Agents; Cell Line, Tumor; Cell Survival; Cells, Cultured; Dideoxynucleosides; HIV Infections; HIV-1; Humans; Molecular Structure; Reverse Transcriptase Inhibitors

2009
Synopsis of some recent tactical application of bioisosteres in drug design.
    Journal of medicinal chemistry, 2011, Apr-28, Volume: 54, Issue:8

    Topics: Cytochrome P-450 Enzyme System; Drug Design

2011
Nucleoside triphosphate pools in minicells of Escherichia coli.
    Journal of bacteriology, 1977, Volume: 130, Issue:2

    Topics: Adenosine Triphosphate; Cytidine Triphosphate; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Escherichia coli; Guanosine Triphosphate; Nucleotides; Thymine Nucleotides; Uridine Triphosphate

1977
Initial binding of 2'-deoxynucleoside 5'-triphosphates to human immunodeficiency virus type 1 reverse transcriptase.
    The Journal of biological chemistry, 1991, Oct-15, Volume: 266, Issue:29

    Topics: Binding, Competitive; Catalysis; Deoxyadenine Nucleotides; Fluorescence Polarization; HIV-1; Kinetics; Osmolar Concentration; Plasmids; RNA-Directed DNA Polymerase; Thymine Nucleotides; Tryptophan

1991
Dynamics of the dATP pool in cultured mammalian cells.
    Experimental cell research, 1992, Volume: 199, Issue:1

    Topics: 3T3 Cells; Adenine; Animals; Aphidicolin; Cell Line; Cytarabine; Deoxyadenine Nucleotides; Deoxyadenosines; DNA; Hypoxanthine; Hypoxanthines; Kinetics; Mice; Pentostatin; Substrate Cycling; Thymine Nucleotides

1992
Inhibition of 2-desamino-2-methyl-10-propagyl-5,8-dideazafolic acid cytotoxicity by 5,10-dideazatetrahydrofolate in L1210 cells with decrease in DNA fragmentation and deoxyadenosine triphosphate pools.
    Biochemical pharmacology, 1991, Jul-15, Volume: 42, Issue:3

    Topics: Animals; Antineoplastic Agents; Cell Cycle; Cell Survival; Deoxyadenine Nucleotides; DNA, Neoplasm; Drug Antagonism; Folic Acid; Folic Acid Antagonists; Hypoxanthine; Hypoxanthines; Leukemia L1210; Mice; Tetrahydrofolates; Thymine Nucleotides; Tumor Cells, Cultured

1991
Folate-deficient human lymphoblasts: changes in deoxynucleotide metabolism and thymidylate cycle activities.
    European journal of haematology, 1991, Volume: 47, Issue:2

    Topics: Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyuridine; Dose-Response Relationship, Drug; Folic Acid; Folic Acid Deficiency; Humans; Lymphocyte Activation; Lymphocytes; Nucleotides; Thymidine; Thymidylate Synthase; Thymine Nucleotides

1991
Synthesis in vitro and application of biotinylated DNA probes for human papilloma virus type 16 by utilizing the polymerase chain reaction.
    The Biochemical journal, 1990, Apr-01, Volume: 267, Issue:1

    Topics: Base Sequence; Biotin; Deoxyadenine Nucleotides; Deoxyuracil Nucleotides; DNA Probes; DNA, Viral; Gene Amplification; Molecular Sequence Data; Nucleic Acid Hybridization; Papillomaviridae; Polymerase Chain Reaction; Thymine Nucleotides

1990
Dynamics of DNA polymerase III holoenzyme of Escherichia coli in replication of a multiprimed template.
    The Journal of biological chemistry, 1985, Oct-15, Volume: 260, Issue:23

    Topics: Adenosine Triphosphate; Adenylyl Imidodiphosphate; Bacteriophage phi X 174; Base Composition; Deoxyadenine Nucleotides; Deoxyribonucleotides; DNA Polymerase III; DNA Replication; DNA Restriction Enzymes; DNA-Directed DNA Polymerase; DNA, Circular; DNA, Single-Stranded; DNA, Viral; Escherichia coli; Kinetics; Nucleic Acid Hybridization; RNA; Templates, Genetic; Thymine Nucleotides

1985
Deoxyribonucleoside triphosphate pools in mutagen sensitive mutants of Neurospora crassa.
    Biochemical and biophysical research communications, 1989, Jul-31, Volume: 162, Issue:2

    Topics: Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; DNA, Fungal; Genes, Fungal; Histidine; Hydroxyurea; Mutation; Neurospora; Neurospora crassa; Thymine Nucleotides

1989
Enzymatic assay for deoxyribonucleoside triphosphates using synthetic oligonucleotides as template primers.
    Analytical biochemistry, 1989, Aug-01, Volume: 180, Issue:2

    Topics: Base Sequence; Cells, Cultured; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; DNA-Directed DNA Polymerase; Humans; Micrococcus; Oligonucleotides; Perchlorates; Poly dA-dT; Reference Standards; Templates, Genetic; Thymine Nucleotides; Tritium

1989
Effects of 3'-azido-3'-deoxythymidine on the deoxynucleoside triphosphate pools of cultured human cells.
    Advances in experimental medicine and biology, 1989, Volume: 253B

    Topics: Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Dose-Response Relationship, Drug; Humans; Nucleoside-Phosphate Kinase; Thymine Nucleotides; Tumor Cells, Cultured; Zidovudine

1989
Deoxyribonucleoside triphosphate metabolism and the mammalian cell cycle. Effects of hydroxyurea on mutant and wild-type mouse S49 T-lymphoma cells.
    Experimental cell research, 1987, Volume: 168, Issue:1

    Topics: Animals; Cell Cycle; Cell Line; Deoxyadenine Nucleotides; Deoxycytidine Kinase; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; Hydroxyurea; Lymphoma; Mice; Mutation; Purine-Nucleoside Phosphorylase; Ribonucleotide Reductases; T-Lymphocytes; Thymidine Kinase; Thymine Nucleotides

1987
Early increase in diadenosine tetraphosphate in regenerating rat liver.
    Experimental cell research, 1988, Volume: 175, Issue:2

    Topics: Adenine Nucleotides; Animals; Cell Division; Chromatography, High Pressure Liquid; Deoxyadenine Nucleotides; Dinucleoside Phosphates; DNA; Liver; Liver Regeneration; Male; Rats; Rats, Inbred Strains; Thymine Nucleotides; Uridine Triphosphate

1988
Purine deoxyribonucleosides counteract effects of hydroxyurea on deoxyribonucleoside triphosphate pools and DNA synthesis.
    Biochemical pharmacology, 1987, Sep-15, Volume: 36, Issue:18

    Topics: Animals; Cell Line; Cricetinae; Deoxyadenine Nucleotides; Deoxyadenosines; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyguanosine; DNA; Hydroxyurea; Nucleotides; Purine Nucleosides; Thymine Nucleotides

1987
A photoaffinity-labeled allosteric site in Escherichia coli ribonucleotide reductase.
    The Journal of biological chemistry, 1986, Feb-05, Volume: 261, Issue:4

    Topics: Adenosine Triphosphate; Affinity Labels; Allosteric Regulation; Allosteric Site; Amino Acid Sequence; Bacterial Proteins; Chromatography, High Pressure Liquid; Chromatography, Ion Exchange; Chromatography, Thin Layer; Deoxyadenine Nucleotides; Deoxyguanine Nucleotides; Escherichia coli; Peptides; Ribonucleotide Reductases; Thymine Nucleotides

1986
A nitrocellulose filter binding assay for ribonucleotide reductase.
    Analytical biochemistry, 1986, Volume: 152, Issue:1

    Topics: Binding Sites; Binding, Competitive; Collodion; Deoxyadenine Nucleotides; Dialysis; Filtration; Protein Binding; Ribonucleotide Reductases; Thymine Nucleotides

1986
Changes of deoxyribonucleoside triphosphate pools induced by hydroxyurea and their relation to DNA synthesis.
    The Journal of biological chemistry, 1986, Dec-05, Volume: 261, Issue:34

    Topics: Cells, Cultured; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; DNA; Hydroxyurea; Ribonucleotide Reductases; Thymine Nucleotides

1986
Mnemonic aspects of Escherichia coli DNA polymerase I. Interaction with one template influences the next interaction with another template.
    Journal of molecular biology, 1986, Jun-05, Volume: 189, Issue:3

    Topics: Base Composition; Deoxyadenine Nucleotides; Deoxycytidine Monophosphate; Deoxyguanine Nucleotides; DNA Polymerase I; DNA Replication; Escherichia coli; Kinetics; Models, Biological; Poly dA-dT; Templates, Genetic; Thymine Nucleotides

1986
Selective expansion of mitochondrial nucleoside triphosphate pools in antimetabolite-treated HeLa cells.
    The Journal of biological chemistry, 1982, Aug-25, Volume: 257, Issue:16

    Topics: Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; DNA; Floxuridine; HeLa Cells; Humans; Methotrexate; Mitochondria; Ribonucleotides; Thymine Nucleotides

1982
Effect of acyclovir on the deoxyribonucleoside triphosphate pool levels in Vero cells infected with herpes simplex virus type 1.
    The American journal of medicine, 1982, Jul-20, Volume: 73, Issue:1A

    Topics: Acyclovir; Animals; Antiviral Agents; Cell Line; Chlorocebus aethiops; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; Guanine; Phosphonoacetic Acid; Simplexvirus; Thymine Nucleotides

1982
An improved method for the quantitative determination of deoxyribonucleoside triphosphates in cell extracts.
    Analytical biochemistry, 1984, May-15, Volume: 139, Issue:1

    Topics: Animals; Carcinoma, Ehrlich Tumor; Cell Extracts; Chromatography, High Pressure Liquid; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; Male; Methylamines; Mice; Oxidation-Reduction; Periodic Acid; Ribonucleotides; Thymine Nucleotides; Tissue Extracts

1984
Direct photoaffinity labeling of ribonucleotide reductase from Escherichia coli. Evidence for enhanced binding of the allosteric effector dTTP by the presence of substrates.
    The Journal of biological chemistry, 1983, May-10, Volume: 258, Issue:9

    Topics: Deoxyadenine Nucleotides; Deoxyguanine Nucleotides; Escherichia coli; Guanosine Diphosphate; Macromolecular Substances; Photochemistry; Ribonucleotide Reductases; Thymine Nucleotides

1983
Nucleoside triphosphate binding to DNA polymerase III holoenzyme of Escherichia coli. A direct photoaffinity labeling study.
    The Journal of biological chemistry, 1984, Jun-25, Volume: 259, Issue:12

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Affinity Labels; Binding Sites; Deoxyadenine Nucleotides; DNA Polymerase III; DNA-Directed DNA Polymerase; Escherichia coli; Photochemistry; Thionucleotides; Thymine Nucleotides; Ultraviolet Rays

1984
Changes in deoxyribonucleoside triphosphate pools in the starfish oocyte during maturation and early embryogenesis.
    Experimental cell research, 1983, Apr-15, Volume: 145, Issue:1

    Topics: Animals; Aphidicolin; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; Diterpenes; Female; Oocytes; Oogenesis; Ovum; Starfish; Thymine Nucleotides; Zygote

1983
Inhibition of polyamine synthesis and proliferation in mouse L cells by DL-alpha-hydrazino-delta-aminovaleric acid, an inhibitor of ornithine decarboxylase.
    Journal of biochemistry, 1983, Volume: 94, Issue:1

    Topics: Adenosylmethionine Decarboxylase; Animals; Cell Division; Deoxyadenine Nucleotides; DNA; L Cells; Mice; Ornithine; Ornithine Decarboxylase Inhibitors; Polyamines; Putrescine; Spermidine; Thymine Nucleotides

1983
Deoxyribonucleoside triphosphate pools in human diploid fibroblasts and their modulation by hydroxyurea and deoxynucleosides.
    Biochemical pharmacology, 1984, May-01, Volume: 33, Issue:9

    Topics: Cells, Cultured; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleosides; Deoxyribonucleotides; Diploidy; Fibroblasts; Humans; Hydroxyurea; Thymine Nucleotides

1984
Evaluation of combinations of drugs that inhibit Ehrlich tumor cell ribonucleotide reductase.
    Cancer research, 1981, Volume: 41, Issue:5

    Topics: Aldehydes; Animals; Antineoplastic Agents; Carcinoma, Ehrlich Tumor; Deoxyadenine Nucleotides; Deoxyguanine Nucleotides; Drug Interactions; Drug Synergism; Edetic Acid; Hydroxyurea; Imidazoles; Inosine; Isoquinolines; Mice; Pyrazoles; Ribonucleotide Reductases; Thiosemicarbazones; Thymine Nucleotides

1981
Studies on the biochemical sequelae of therapy in Thy-acute lymphoblastic leukaemia with the adenosine deaminase inhibitor 2' deoxycoformycin.
    British journal of haematology, 1981, Volume: 49, Issue:1

    Topics: Adenosine Deaminase; Adenosylhomocysteinase; Adolescent; Adult; Bone Marrow; Coformycin; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Humans; Hydrolases; Leukemia, Lymphoid; Leukocyte Count; Male; Pentostatin; Ribonucleosides; Thymine Nucleotides

1981
Direct photoaffinity labeling of an allosteric site of subunit protein M1 of mouse ribonucleotide reductase by dATP. Evidence for two independent binding interactions within the allosteric specificity site.
    The Journal of biological chemistry, 1982, Aug-25, Volume: 257, Issue:16

    Topics: Affinity Labels; Allosteric Site; Animals; Binding Sites; Binding, Competitive; Cell Line; Deoxyadenine Nucleotides; Deoxyguanine Nucleotides; Lymphoma, Non-Hodgkin; Mice; Mutation; Neoplasms, Experimental; Ribonucleotide Reductases; Thymine Nucleotides; Ultraviolet Rays

1982
Unusual compartmentation of precursors for nuclear and mitochondrial DNA in mouse L cells.
    The Journal of biological chemistry, 1982, Aug-25, Volume: 257, Issue:16

    Topics: Animals; Cell Compartmentation; Cell Nucleus; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; DNA; L Cells; Mice; Mitochondria; Phosphorus Radioisotopes; Thymine Nucleotides; Tritium; Uridine

1982
The nucleotide analog 2-aminopurine as a spectroscopic probe of nucleotide incorporation by the Klenow fragment of Escherichia coli polymerase I and bacteriophage T4 DNA polymerase.
    Biochemistry, 1995, Jul-18, Volume: 34, Issue:28

    Topics: 2-Aminopurine; Bacteriophage T4; Base Sequence; Deoxyadenine Nucleotides; Deoxyribonucleotides; DNA; DNA Polymerase I; DNA-Directed DNA Polymerase; Escherichia coli; Fluorescent Dyes; Kinetics; Molecular Sequence Data; Spectrometry, Fluorescence; Substrate Specificity; Thymine Nucleotides; Viral Proteins

1995
Bcl-2 oncogene protects a bone marrow-derived pre-B-cell line from 5'-fluor,2'-deoxyuridine-induced apoptosis.
    Biochemical and biophysical research communications, 1993, Jul-15, Volume: 194, Issue:1

    Topics: Animals; Apoptosis; B-Lymphocytes; Cell Line; Cell Survival; Deoxyadenine Nucleotides; Dose-Response Relationship, Drug; Floxuridine; Hematopoietic Stem Cells; Humans; Kinetics; Mice; Protein-Tyrosine Kinases; Proto-Oncogene Proteins; Proto-Oncogene Proteins c-bcl-2; Proto-Oncogenes; Thymine Nucleotides; Transfection

1993
Replication of the base pair 6-thioguanine/5-methyl-2-pyrimidine with the large Klenow fragment of Escherichia coli DNA polymerase I.
    Biochemistry, 1993, Mar-30, Volume: 32, Issue:12

    Topics: Base Composition; Deoxyadenine Nucleotides; Deoxyguanine Nucleotides; DNA Polymerase I; DNA Replication; Escherichia coli; Exodeoxyribonuclease V; Exodeoxyribonucleases; Kinetics; Mathematics; Models, Biological; Pyrimidinones; Templates, Genetic; Thioguanine; Thymine Nucleotides

1993
Mutational studies of human immunodeficiency virus type 1 reverse transcriptase: the involvement of residues 183 and 184 in the fidelity of DNA synthesis.
    FEBS letters, 1996, Aug-12, Volume: 391, Issue:3

    Topics: Base Sequence; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; DNA Replication; DNA, Viral; Electrophoresis, Polyacrylamide Gel; HIV Reverse Transcriptase; HIV-1; Humans; Kinetics; Molecular Sequence Data; Mutation; RNA-Directed DNA Polymerase; Thymine Nucleotides

1996
Amphipathic domains in the C terminus of the transmembrane protein (gp41) permeabilize HIV-1 virions: a molecular mechanism underlying natural endogenous reverse transcription.
    Proceedings of the National Academy of Sciences of the United States of America, 1996, Oct-29, Volume: 93, Issue:22

    Topics: Animals; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; HIV Envelope Protein gp41; HIV Reverse Transcriptase; HIV-1; Humans; Mice; Permeability; Rats; Thymine Nucleotides; Transcription, Genetic; Virion

1996
Stereoisomers of deoxynucleoside 5'-triphosphates as substrates for template-dependent and -independent DNA polymerases.
    The Journal of biological chemistry, 1997, Apr-04, Volume: 272, Issue:14

    Topics: Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; DNA Primers; DNA-Directed DNA Polymerase; Electrophoresis, Polyacrylamide Gel; HIV Reverse Transcriptase; Humans; Stereoisomerism; Structure-Activity Relationship; Templates, Genetic; Thymine Nucleotides

1997
Sensitivity of a mutator gene in Chinese hamster ovary cell to deoxynucleoside triphosphate pool alterations.
    Molecular and cellular biology, 1981, Volume: 1, Issue:7

    Topics: Animals; CHO Cells; Cricetinae; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Emetine; Female; Mutation; Ovary; Protein Synthesis Inhibitors; Thymidine; Thymine Nucleotides

1981
High-efficiency T-vector cloning of PCR products by forced A tagging and post-ligation restriction enzyme digestion.
    BioTechniques, 1997, Volume: 23, Issue:5

    Topics: Cloning, Molecular; Deoxyadenine Nucleotides; Deoxyribonucleases, Type II Site-Specific; DNA Ligases; DNA Primers; Escherichia coli; Genetic Vectors; Polymerase Chain Reaction; Taq Polymerase; Thymine Nucleotides

1997
The mutations induced by oxidatively damaged nucleotides, 5-formyl-dUTP and 5-hydroxy-dCTP,in Escherichia coli.
    Nucleic acids research, 1998, Oct-15, Volume: 26, Issue:20

    Topics: Bacterial Proteins; Deoxyadenine Nucleotides; Deoxycytidine; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyuracil Nucleotides; Deoxyuridine; DNA Mutational Analysis; DNA Repair; Escherichia coli; Escherichia coli Proteins; Genome, Bacterial; Lac Repressors; Models, Genetic; Mutagenesis; Nucleic Acid Hybridization; Oxidants; Point Mutation; Repressor Proteins; Sequence Analysis, DNA; Thymine Nucleotides

1998
The antiproliferative and cell cycle effects of 5,6,7, 8-tetrahydro-N5,N10-carbonylfolic acid, an inhibitor of methylenetetrahydrofolate dehydrogenase, are potentiated by hypoxanthine.
    The Journal of pharmacology and experimental therapeutics, 1998, Volume: 287, Issue:1

    Topics: Antineoplastic Agents; Apoptosis; Cell Cycle; Cell Division; Deoxyadenine Nucleotides; Drug Synergism; Enzyme Inhibitors; Folic Acid; Humans; Hypoxanthine; Methylenetetrahydrofolate Dehydrogenase (NADP); Thymine Nucleotides; Tumor Cells, Cultured

1998
Ratio of 2'-deoxyadenosine-5'-triphosphate/thymidine-5'-triphosphate influences the commitment of human colon carcinoma cells to thymineless death.
    Clinical cancer research : an official journal of the American Association for Cancer Research, 1995, Volume: 1, Issue:7

    Topics: Cell Death; Cell Survival; Clone Cells; Deoxyadenine Nucleotides; Deoxyadenosines; Fluorouracil; Humans; Kinetics; Leucovorin; Nucleosomes; Thymine; Thymine Nucleotides; Tumor Cells, Cultured; Tumor Stem Cell Assay

1995
Modulation of terminal deoxynucleotidyltransferase activity by the DNA-dependent protein kinase.
    Journal of immunology (Baltimore, Md. : 1950), 1999, Jul-15, Volume: 163, Issue:2

    Topics: Animals; Catalysis; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; DNA Nucleotidylexotransferase; DNA-Activated Protein Kinase; DNA-Binding Proteins; Electrophoresis, Polyacrylamide Gel; Enzyme Activation; Humans; Mice; Mice, SCID; Nuclear Proteins; Oligonucleotides; Protein Serine-Threonine Kinases; Substrate Specificity; Thymine Nucleotides; Tumor Cells, Cultured

1999
Sequencing errors in reactions using labeled terminators.
    BioTechniques, 1999, Volume: 27, Issue:4

    Topics: Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Dideoxyadenosine; DNA Primers; DNA-Directed DNA Polymerase; Inosine Triphosphate; Polymerase Chain Reaction; Potassium Chloride; Quality Control; Sensitivity and Specificity; Sequence Analysis, DNA; Templates, Genetic; Thymine Nucleotides

1999
Effects of X-irradiation on DNA precursor metabolism and deoxyribonucleoside triphosphate pools in Chinese hamster cells.
    Radiation research, 1974, Volume: 60, Issue:1

    Topics: Animals; CHO Cells; Cricetinae; Cytidine; Deoxyadenine Nucleotides; Deoxycytidine; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; DNA Damage; DNA Repair; DNA Replication; Dose-Response Relationship, Radiation; Intracellular Fluid; RNA; S Phase; Thymidine; Thymine Nucleotides

1974
Preparation of PCR-quality mouse genomic DNA with hot sodium hydroxide and tris (HotSHOT).
    BioTechniques, 2000, Volume: 29, Issue:1

    Topics: Aging; Animals; Buffers; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; DNA; Hot Temperature; Hydrogen-Ion Concentration; Indicators and Reagents; Magnesium Chloride; Mice; Polymerase Chain Reaction; Sodium Hydroxide; Solubility; Taq Polymerase; Thymine Nucleotides

2000
Universal bases for hybridization, replication and chain termination.
    Nucleic acids research, 2000, Aug-01, Volume: 28, Issue:15

    Topics: Base Pairing; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; DNA; DNA Replication; DNA-Directed DNA Polymerase; Drug Stability; Hot Temperature; Hydrogen Bonding; Isoquinolines; Methylation; Nucleic Acid Hybridization; Nucleosides; Oligonucleotides; Substrate Specificity; Templates, Genetic; Thymine Nucleotides

2000
Recognition of 2'-deoxy-l-ribonucleoside 5'-triphosphates by human telomerase.
    Biochemical and biophysical research communications, 2000, Dec-20, Volume: 279, Issue:2

    Topics: Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; Humans; Kinetics; Stereoisomerism; Substrate Specificity; Telomerase; Thymine Nucleotides

2000
Significance of nucleobase shape complementarity and hydrogen bonding in the formation and stability of the closed polymerase-DNA complex.
    Biochemistry, 2001, Mar-13, Volume: 40, Issue:10

    Topics: Base Composition; Base Pairing; Deoxyadenine Nucleotides; Deoxyribonucleotides; DNA; DNA Polymerase I; DNA Primers; Enzyme Stability; Hydrogen Bonding; Nucleic Acid Conformation; Nucleotides; Pyrenes; Ribonucleotides; Templates, Genetic; Thymine Nucleotides; Toluene

2001
Base sequence dependence of in vitro translesional DNA replication past a bulky lesion catalyzed by the exo- Klenow fragment of Pol I.
    Biochemistry, 2001, Jun-05, Volume: 40, Issue:22

    Topics: 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide; Base Sequence; Carcinogens, Environmental; Catalysis; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyguanosine; DNA Damage; DNA Polymerase I; DNA Primers; DNA Replication; Guanine; Kinetics; Mutagenesis; Mutagens; Polydeoxyribonucleotides; Pyrimidine Nucleotides; Sequence Analysis, DNA; Templates, Genetic; Thymine Nucleotides

2001
Use of 2-aminopurine and tryptophan fluorescence as probes in kinetic analyses of DNA polymerase beta.
    Biochemistry, 2002, Sep-17, Volume: 41, Issue:37

    Topics: 2-Aminopurine; Animals; Catalysis; Cations, Divalent; Deoxyadenine Nucleotides; Diphosphates; DNA Polymerase beta; DNA Probes; Kinetics; Magnesium; Rats; Spectrometry, Fluorescence; Substrate Specificity; Templates, Genetic; Thymine Nucleotides; Tryptophan

2002
Excess dNTPs minimize RNA hydrolysis during reverse transcription.
    BioTechniques, 2002, Volume: 33, Issue:5

    Topics: Avian Sarcoma Viruses; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; DNA, Complementary; Drug Stability; Electrophoresis, Agar Gel; Half-Life; Hot Temperature; Hydrolysis; Magnesium; Moloney murine leukemia virus; Nucleic Acid Denaturation; RNA; RNA-Directed DNA Polymerase; Thymine Nucleotides; Transcription, Genetic; Viral Proteins

2002
Comprehensive model for allosteric regulation of mammalian ribonucleotide reductase: refinements and consequences.
    Biochemistry, 2003, Feb-18, Volume: 42, Issue:6

    Topics: Adenosine Triphosphate; Allosteric Regulation; Animals; Asparagine; Aspartic Acid; Cytidine Diphosphate; Deoxyadenine Nucleotides; Dimerization; Enzyme Activation; Guanosine Diphosphate; Kinetics; Light; Magnesium; Mice; Models, Chemical; Mutagenesis, Site-Directed; Protein Subunits; Recombinant Proteins; Ribonucleoside Diphosphate Reductase; Ribonucleotide Reductases; Scattering, Radiation; Substrate Specificity; Thymine Nucleotides; Tumor Cells, Cultured

2003
Translesion synthesis past platinum DNA adducts by human DNA polymerase mu.
    Biochemistry, 2003, Feb-18, Volume: 42, Issue:6

    Topics: Catalysis; Cisplatin; Deoxyadenine Nucleotides; Deoxyguanine Nucleotides; DNA Adducts; DNA Damage; DNA Primers; DNA-Directed DNA Polymerase; DNA, Single-Stranded; Guanine Nucleotides; Humans; Oligonucleotides; Organoplatinum Compounds; Oxaliplatin; Templates, Genetic; Thymine Nucleotides

2003
Structure of the large subunit of class Ib ribonucleotide reductase from Salmonella typhimurium and its complexes with allosteric effectors.
    Journal of molecular biology, 2003, Jun-27, Volume: 330, Issue:1

    Topics: Allosteric Regulation; Allosteric Site; Amino Acid Sequence; Binding Sites; Crystallography, X-Ray; Cysteine; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Dimerization; Escherichia coli; Macromolecular Substances; Models, Molecular; Molecular Sequence Data; Oxidation-Reduction; Protein Conformation; Protein Subunits; Ribonucleotide Reductases; Salmonella typhimurium; Sequence Homology, Amino Acid; Thymine Nucleotides

2003
Deoxyribonucleotide pool imbalance stimulates deletions in HeLa cell mitochondrial DNA.
    The Journal of biological chemistry, 2003, Nov-07, Volume: 278, Issue:45

    Topics: Base Pairing; Blotting, Southern; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; DNA, Mitochondrial; Gastrointestinal Diseases; Gene Deletion; HeLa Cells; Humans; Mitochondria; Mitochondrial Encephalomyopathies; Point Mutation; Polymerase Chain Reaction; Thymidine; Thymine Nucleotides

2003
Tight binding of deoxyribonucleotide triphosphates to human thymidine kinase 2 expressed in Escherichia coli. Purification and partial characterization of its dimeric and tetrameric forms.
    Biochemistry, 2003, Dec-30, Volume: 42, Issue:51

    Topics: Binding Sites; Cell Line, Tumor; Chaperonin 10; Chaperonin 60; Cloning, Molecular; Culture Media, Conditioned; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Dimerization; Enzyme Inhibitors; Escherichia coli; Ethanol; Humans; Isoenzymes; Kinetics; Models, Molecular; Recombinant Fusion Proteins; Solubility; Spectrometry, Fluorescence; Substrate Specificity; Thymidine Kinase; Thymine Nucleotides; Tryptophan

2003
Pre-steady-state kinetic studies of the fidelity of human DNA polymerase mu.
    Biochemistry, 2004, Nov-02, Volume: 43, Issue:43

    Topics: Binding Sites; Buffers; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; DNA; DNA Nucleotidylexotransferase; DNA Primers; DNA-Directed DNA Polymerase; Enzyme Activation; Enzyme Stability; Humans; Kinetics; Peptide Chain Elongation, Translational; Ribonucleotides; Substrate Specificity; Templates, Genetic; Thymine Nucleotides; Uridine Triphosphate

2004
Base selectivity is impaired by mutants that perturb hydrogen bonding networks in the RB69 DNA polymerase active site.
    Biochemistry, 2005, Mar-08, Volume: 44, Issue:9

    Topics: Alanine; Amino Acid Substitution; Base Pair Mismatch; Binding Sites; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; DNA-Directed DNA Polymerase; Enterobacter; Hydrogen Bonding; Kinetics; Nucleotides; Phenylalanine; Substrate Specificity; Thymine Nucleotides; Toluene; Tyrosine; Viral Proteins

2005
Multiple enzyme activities of Escherichia coli MutT protein for sanitization of DNA and RNA precursor pools.
    Biochemistry, 2005, May-03, Volume: 44, Issue:17

    Topics: Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; DNA Replication; DNA, Bacterial; Escherichia coli Proteins; Guanine; Guanosine Triphosphate; Hydrolysis; Kinetics; Multienzyme Complexes; Phosphoric Monoester Hydrolases; Pyrophosphatases; RNA, Bacterial; Thymine Nucleotides; Transcription, Genetic

2005
Four-color multiplex reverse transcription polymerase chain reaction--overcoming its limitations.
    Analytical biochemistry, 2005, Sep-01, Volume: 344, Issue:1

    Topics: Color; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; DNA Primers; DNA Probes; DNA, Complementary; Gene Expression; Reverse Transcriptase Polymerase Chain Reaction; Taq Polymerase; Thymine Nucleotides

2005
Mutagenic nucleotide incorporation and hindered translocation by a food carcinogen C8-dG adduct in Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): modeling and dynamics studies.
    Nucleic acids research, 2006, Volume: 34, Issue:11

    Topics: Binding Sites; Carcinogens; Computational Biology; Computer Simulation; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyguanosine; Deoxyribonucleotides; DNA; DNA Adducts; DNA Polymerase beta; Imidazoles; Models, Molecular; Motion; Mutagenesis; Nucleic Acid Conformation; Sulfolobus solfataricus; Thymine Nucleotides

2006
Mitochondrial deoxynucleotide pool sizes in mouse liver and evidence for a transport mechanism for thymidine monophosphate.
    Proceedings of the National Academy of Sciences of the United States of America, 2006, Dec-05, Volume: 103, Issue:49

    Topics: Animals; Biological Transport, Active; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyuracil Nucleotides; Male; Mice; Mice, Inbred C57BL; Mitochondria, Liver; Thymidine Monophosphate; Thymine Nucleotides

2006
The mimivirus genome encodes a mitochondrial carrier that transports dATP and dTTP.
    Journal of virology, 2007, Volume: 81, Issue:7

    Topics: Amino Acid Sequence; Animals; Biological Transport; Cattle; Deoxyadenine Nucleotides; DNA Viruses; Genome, Viral; Humans; Lactococcus lactis; Mitochondria; Molecular Sequence Data; Sequence Alignment; Thymine Nucleotides

2007
Surface-initiated enzymatic polymerization of DNA.
    Langmuir : the ACS journal of surfaces and colloids, 2007, Nov-06, Volume: 23, Issue:23

    Topics: Antibodies; Antibody Specificity; Deoxyadenine Nucleotides; Deoxyguanine Nucleotides; DNA Nucleotidylexotransferase; DNA, Single-Stranded; Microscopy, Atomic Force; Nanotechnology; Oligonucleotides; Polydeoxyribonucleotides; Spectrometry, X-Ray Emission; Surface Plasmon Resonance; Surface Properties; Thymine Nucleotides; Time Factors

2007
Nuclear magnetic resonance investigation of primer--template models: formation of a pyrimidine bulge upon misincorporation.
    Biochemistry, 2008, Apr-15, Volume: 47, Issue:15

    Topics: Adenine; Base Pair Mismatch; Base Pairing; Cytosine; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; DNA Primers; DNA Replication; Guanine; Models, Genetic; Nuclear Magnetic Resonance, Biomolecular; Templates, Genetic; Thymidine; Thymine Nucleotides

2008
Development of bioluminescent pyrophosphate assay using pyruvate phosphate dikinase and its application to single-nucleotide polymorphism analysis.
    Analytical biochemistry, 2008, Aug-01, Volume: 379, Issue:1

    Topics: Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Diphosphates; DNA; Luciferases; Luminescent Measurements; Models, Biological; Polymorphism, Single Nucleotide; Pyruvate, Orthophosphate Dikinase; ras Proteins; Reproducibility of Results; Thionucleotides; Thymine Nucleotides; Tumor Suppressor Protein p53

2008
Influence of local sequence context on damaged base conformation in human DNA polymerase iota: molecular dynamics studies of nucleotide incorporation opposite a benzo[a]pyrene-derived adenine lesion.
    Nucleic acids research, 2009, Volume: 37, Issue:21

    Topics: Base Pair Mismatch; Base Pairing; Base Sequence; Benzopyrenes; Carcinogens, Environmental; Computer Simulation; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; DNA Adducts; DNA Damage; DNA Polymerase iota; DNA-Directed DNA Polymerase; Humans; Hydrogen Bonding; Magnesium; Models, Molecular; Nucleic Acid Conformation; Thymine Nucleotides

2009
Automated mass action model space generation and analysis methods for two-reactant combinatorially complex equilibriums: an analysis of ATP-induced ribonucleotide reductase R1 hexamerization data.
    Biology direct, 2009, Dec-09, Volume: 4

    Topics: Adenosine Triphosphate; Catalytic Domain; Computer Simulation; Deoxyadenine Nucleotides; Deoxyguanine Nucleotides; Humans; Least-Squares Analysis; Models, Biological; Nonlinear Dynamics; Protein Multimerization; Protein Subunits; Ribonucleotide Reductases; Substrate Specificity; Thymine Nucleotides

2009
Mechanisms of mutagenesis in vivo due to imbalanced dNTP pools.
    Nucleic acids research, 2011, Volume: 39, Issue:4

    Topics: Amino Acid Substitution; Amino Acid Transport Systems, Basic; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; INDEL Mutation; Mutagenesis; Mutation; Ribonucleotide Reductases; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Thymine Nucleotides

2011
HIV-1 restriction factor SAMHD1 is a deoxynucleoside triphosphate triphosphohydrolase.
    Nature, 2011, Nov-06, Volume: 480, Issue:7377

    Topics: Allosteric Regulation; Biocatalysis; Catalytic Domain; Crystallography, X-Ray; Dendritic Cells; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; HIV-1; Humans; Hydrolysis; Models, Biological; Models, Molecular; Monomeric GTP-Binding Proteins; Myeloid Cells; Nucleoside-Triphosphatase; Protein Structure, Tertiary; Reverse Transcription; SAM Domain and HD Domain-Containing Protein 1; Thymine Nucleotides; Viral Regulatory and Accessory Proteins; Virus Replication

2011
How conformational dynamics of DNA polymerase select correct substrates: experiments and simulations.
    Structure (London, England : 1993), 2012, Apr-04, Volume: 20, Issue:4

    Topics: Algorithms; Catalytic Domain; Deoxyadenine Nucleotides; DNA; HIV Reverse Transcriptase; Humans; Kinetics; Molecular Dynamics Simulation; Probability; Protein Binding; Protein Structure, Secondary; Protein Structure, Tertiary; Protein Subunits; Solutions; Thermodynamics; Thymine Nucleotides; Time Factors

2012
Gram-scale chemical synthesis of 2'-deoxynucleoside-5'-o-triphosphates.
    Current protocols in nucleic acid chemistry, 2012, Volume: Chapter 13

    Topics: Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Diphosphates; Hydrolysis; Nucleosides; Purine Nucleotides; Pyrimidine Nucleotides; Thymine Nucleotides

2012
Binary and ternary binding affinities between exonuclease-deficient Klenow fragment (Kf-exo(-)) and various arylamine DNA lesions characterized by surface plasmon resonance.
    Chemical research in toxicology, 2012, Aug-20, Volume: 25, Issue:8

    Topics: 2-Acetylaminofluorene; Aminobiphenyl Compounds; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; DNA; DNA Adducts; DNA Polymerase I; Fluorenes; Kinetics; Surface Plasmon Resonance; Thymine Nucleotides

2012
dNTP-dependent conformational transitions in the fingers subdomain of Klentaq1 DNA polymerase: insights into the role of the "nucleotide-binding" state.
    The Journal of biological chemistry, 2013, May-10, Volume: 288, Issue:19

    Topics: Bacterial Proteins; Catalytic Domain; Deoxyadenine Nucleotides; DNA Polymerase I; Fluorescence Resonance Energy Transfer; Fluorescent Dyes; Hydrazines; Kinetics; Models, Molecular; Protein Binding; Staining and Labeling; Substrate Specificity; Thermus; Thymine Nucleotides

2013
The DinB•RecA complex of Escherichia coli mediates an efficient and high-fidelity response to ubiquitous alkylation lesions.
    Environmental and molecular mutagenesis, 2014, Volume: 55, Issue:2

    Topics: Adenine; Alkylation; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; DNA Adducts; DNA Replication; DNA, Bacterial; Escherichia coli; Escherichia coli Proteins; Kinetics; Mutagenesis; Rec A Recombinases; Thymine Nucleotides

2014
Effect of dNTP pool alterations on fidelity of leading and lagging strand DNA replication in E. coli.
    Mutation research, 2014, Volume: 759

    Topics: Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; DNA Replication; Escherichia coli; Lac Operon; Thymine Nucleotides

2014
Increased and imbalanced dNTP pools symmetrically promote both leading and lagging strand replication infidelity.
    PLoS genetics, 2014, Volume: 10, Issue:12

    Topics: Base Pair Mismatch; Base Sequence; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; DNA Mismatch Repair; DNA Replication; Genomic Instability; Molecular Sequence Data; Mutagenesis; Mutation Rate; Organisms, Genetically Modified; Saccharomyces cerevisiae; Thymine Nucleotides

2014
How Y-Family DNA polymerase IV is more accurate than Dpo4 at dCTP insertion opposite an N2-dG adduct of benzo[a]pyrene.
    DNA repair, 2015, Volume: 35

    Topics: Archaeal Proteins; Benzo(a)pyrene; Benzopyrenes; Carcinogens, Environmental; Catalytic Domain; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanosine; DNA Polymerase beta; Escherichia coli; Escherichia coli Proteins; Mutagens; Sulfolobus solfataricus; Thymine Nucleotides

2015
Development and validation of an LC-MS/MS quantitative method for endogenous deoxynucleoside triphosphates in cellular lysate.
    Biomedical chromatography : BMC, 2017, Volume: 31, Issue:3

    Topics: Chromatography, Liquid; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Tandem Mass Spectrometry; Thymine Nucleotides

2017
Molecular Insights into the Translesion Synthesis of Benzyl-Guanine from Molecular Dynamics Simulations: Structural Evidence of Mutagenic and Nonmutagenic Replication.
    Biochemistry, 2017, 04-04, Volume: 56, Issue:13

    Topics: Benzyl Compounds; Catalytic Domain; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; DNA Adducts; DNA Damage; DNA Polymerase beta; DNA Repair; DNA Replication; Escherichia coli; Escherichia coli Proteins; Guanine; Hydrogen Bonding; Molecular Dynamics Simulation; Mutagenesis; Protein Structure, Secondary; Protein Structure, Tertiary; Thymine Nucleotides

2017
Quantitation of deoxynucleoside triphosphates by click reactions.
    Scientific reports, 2020, 01-17, Volume: 10, Issue:1

    Topics: Click Chemistry; Copper; Cycloaddition Reaction; Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; Deoxyuracil Nucleotides; HCT116 Cells; HEK293 Cells; Humans; K562 Cells; Rhodamines; Staining and Labeling; Thymine Nucleotides

2020
Mycobacterium tuberculosis thymidylate synthase (ThyX) is a target for plumbagin, a natural product with antimycobacterial activity.
    PloS one, 2020, Volume: 15, Issue:2

    Topics: Antitubercular Agents; Biological Products; Cell Survival; Deoxyadenine Nucleotides; Mycobacterium tuberculosis; Naphthoquinones; Thymidylate Synthase; Thymine Nucleotides

2020
Enzymatic Synthesis of Chimeric DNA Oligonucleotides by
    ACS synthetic biology, 2021, 07-16, Volume: 10, Issue:7

    Topics: Deoxyadenine Nucleotides; Deoxycytosine Nucleotides; Deoxyguanine Nucleotides; Deoxyribonucleotides; DNA-Directed RNA Polymerases; Fluorine; Substrate Specificity; Synthetic Biology; Thymine Nucleotides; Transcription, Genetic; Viral Proteins

2021