texas-red and 1-palmitoyl-2-oleoylphosphatidylcholine

DNA hydrogels are promising materials for various fields of research, such as in vitro protein production, drug carrier systems, and cell transplantation. For effective application and further utilization of DNA hydrogels, highly effective methods of nano- and microscale DNA hydrogel fabrication are needed. In this respect, the fundamental advantages of a core-shell structure can provide a simple remedy. An isolated reaction chamber and massive production platform can be provided by a core-shell structure, and lipids are one of the best shell precursor candidates because of their intrinsic biocompatibility and potential for easy modification. Here, we demonstrate a novel core-shell nanostructure made of gene-knitted X-shaped DNA (X-DNA) origami-networked gel core-supported lipid strata. It was simply organized by cross-linking DNA molecules via T4 enzymatic ligation and enclosing them in lipid strata. As a condensed core structure, the DNA gel shows Brownian behavior in a confined area. It has been speculated that they could, in the future, be utilized for in vitro protein synthesis, gene-integration transporters, and even new molecular bottom-up biological machineries.

Topics: Bacteriophage T4; Benzothiazoles; Cholesterol; Diamines; DNA, Single-Stranded; Fluorescent Dyes; Hydrogels; Ligases; Microscopy, Electron, Transmission; Nanostructures; Nucleic Acid Conformation; Organic Chemicals; Phosphatidylcholines; Phosphatidylethanolamines; Phosphatidylglycerols; Quinolines; Viral Proteins; Xanthenes

Contrast in confocal microscopy of phase-separated monolayers at the air-water interface can be generated by the selective adsorption of water-soluble fluorescent dyes to disordered monolayer phases. Optical sectioning minimizes the fluorescence signal from the subphase, whereas convolution of the measured point spread function with a simple box model of the interface provides quantitative assessment of the excess dye concentration associated with the monolayer. Coexisting liquid-expanded, liquid-condensed, and gas phases could be visualized due to differential dye adsorption in the liquid-expanded and gas phases. Dye preferentially adsorbed to the liquid-disordered phase during immiscible liquid-liquid phase coexistence, and the contrast persisted through the critical point as shown by characteristic circle-to-stripe shape transitions. The measured dye concentration in the disordered phase depended on the phase composition and surface pressure, and the dye was expelled from the film at the end of coexistence. The excess concentration of a cationic dye within the double layer adjacent to an anionic phospholipid monolayer was quantified as a function of subphase ionic strength, and the changes in measured excess agreed with those predicted by the mean-field Gouy-Chapman equations. This provided a rapid and noninvasive optical method of measuring the fractional dissociation of lipid headgroups and the monolayer surface potential.

Topics: 1,2-Dipalmitoylphosphatidylcholine; Adsorption; Fluorescence; Fluorescent Dyes; Hydrogen-Ion Concentration; Osmolar Concentration; Phase Transition; Phosphatidylcholines; Rhodamine 123; Solubility; Surface Properties; Temperature; Water; Xanthenes

We report the formation of a new class of supported membranes consisting of a fluid phospholipid bilayer coupled directly to a broadly tunable colloidal crystal with a well-defined photonic band gap. For nanoscale colloidal crystals exhibiting a band gap at the optical frequencies, substrate-induced vesicle fusion gives rise to a surface bilayer riding onto the crystal surface. The bilayer is two-dimensionally continuous, spanning multiple beads with lateral mobilities which reflect the coupling between the bilayer topography and the curvature of the supporting colloidal surface. In contrast, the spreading of vesicles on micrometer scale colloidal crystals results in the formation of bilayers wrapping individual colloidal beads. We show that simple UV photolithography of colloidal crystals produces binary patterns of crystal wettabilities, photonic stopbands, and corresponding patterns of lipid mono- and bilayer morphologies. We envisage that these approaches will be exploitable for the development of optical transduction assays and microarrays for many membrane-mediated processes, including transport and receptor-ligand interactions.

Topics: Colloids; Fluorescence Recovery After Photobleaching; Hydrophobic and Hydrophilic Interactions; Lipid Bilayers; Phosphatidylcholines; Phospholipids; Silicon Dioxide; Xanthenes

Liposomes with mean diameters between 45 and 73 nm have been prepared from 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine (POPC) at pH 8.0; and a new methodology is described which allows one to quantitatively follow the phospholipase D-catalyzed transformation of POPC to 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphatidic acid and free choline. The method does not require a special sample preparation; it takes advantage of the fact that the chemical shift of the protons of the three methyl groups in free choline differs from the chemical shift of the choline methyl protons in POPC. Measurements have been carried out under different experimental configurations and they have been paralleled by electron and light microscopy studies, partially using a fluorescently labeled phospholipid. It has been found that for a fixed concentration of the Ca2+-independent phospholipase D from Streptomyces sp. AA 586 the initial velocity and the reaction yields depend on the size of the vesicles. The smaller the vesicles, the higher the yields and the lower the initial rates. Furthermore, the size of the liposomes does not change during hydrolysis of the external POPC layer.

Topics: Choline; Fluorescent Dyes; Hydrolysis; Kinetics; Liposomes; Magnetic Resonance Spectroscopy; Microscopy, Electron; Phosphatidic Acids; Phosphatidylcholines; Phosphatidylethanolamines; Phospholipase D; Scattering, Radiation; Streptomyces; Time Factors; Xanthenes