serine and oligonucleotides

serine has been researched along with oligonucleotides in 60 studies

Research

Studies (60)

TimeframeStudies, this research(%)All Research%
pre-199014 (23.33)18.7374
1990's15 (25.00)18.2507
2000's25 (41.67)29.6817
2010's6 (10.00)24.3611
2020's0 (0.00)2.80

Authors

AuthorsStudies
McClain, WH; Seidman, JG1
Petrova, M; Philippsen, P; Zachau, HG1
Banerjee, AK; Barik, S; Das, T; Takacs, AM1
Abeles, RH; Epstein, DM1
Frère, JM; Jacob, F; Joris, B1
Hryniewicz, MM; Kredich, NM1
Chirala, SS; Pazirandeh, M; Wakil, SJ1
Philippsen, P; Zachau, G1
Philippsen, P; Zachau, HG2
Clark, BF; Ish-Horowicz, D1
Altman, S; Barrell, BG; Guthrie, C; McClain, WH; Seidman, JG; Smith, JD1
Kruppa, J; Zachau, HG1
Hatfield, D1
Lessard, JL; Pestka, S2
Fittler, F; Zachau, HG1
Cary, L; Kearns, DR; Lightfoot, DR; Reid, BR; Shulman, RG; Wong, KL; Wong, YP1
Wintermeyer, W; Zachau, HG1
Cornish, VW; Kaplan, MI; Kollman, PA; Schultz, PG; Veenstra, DL1
Curran, TP; Riordan, JF; Shapiro, R1
Nomokonova, NY; Pugachev, KV; Wolf, YI1
Dementieva, LA; Egorov, AM; Egorova, OA; Galkin, AG; Kulakova, LB; Marchenko, GN; Sheluho, DV; Tishkov, VI1
Bernstein, RM; Lake, DF; Marchalonis, JJ; Schluter, SF1
McFadden, BA; Rehman, A1
Bandyopadhyay, P; Kren, BT; Steer, CJ1
Rochester, SC; Traktman, P1
Adams, MD; Breger, KS; Kanaar, R; Rio, DC; Rudner, DZ1
Bandyopadhyay, P; Kren, BT; Linehan-Stieers, C; Ma, X; Steer, CJ1
Allocati, N; Casalone, E; Di Ilio, C; Favaloro, B; Masulli, M; Parker, MW; Santucci, S1
Li, XQ; Liu, H; Lu, CD; Tan, B; Zhao, YF; Zhuang, M1
Buck, E; Iyengar, R; Scarlata, S; Schatz, P1
Boland, R; Buitrago, CG; de Boland, AR; Pardo, VG1
Jin, Y; Sun, M; Tan, B; Zhao, Y; Zhu, C1
Brewer, B; Brewer, G; Charles, S; Lu, J; Sinha, S; Suarez, Y; Sutphen, K; Villanueva-Feliciano, EC; Wilson, GM; Ysla, RM1
Arman, A; Auron, PE1
Dodson, ML; Lloyd, RS; Meador, MG; Rajagopalan, L1
Butler, GS; Overall, CM; Tam, EM1
Leonard, M; Schmid, SL; Song, BD1
Beck, M; Grohmanova, K; Gutierrez, P; Hess, D; Kroschewski, R; Schlaepfer, D1
Dunphy, WG; Shevchenko, A; Yoo, HY1
Douglas, P; Kurz, EU; Lees-Miller, SP1
Defrancq, E; Dumy, P; Singh, Y1
Kyriakis, JM; Makkinje, A; Xu, D1
Daubner, SC; Fitzpatrick, PF; Royo, M1
Goold, RG; Gordon-Weeks, PR; Marsh, P; Trivedi, N; Wood-Kaczmar, A1
Hu, Z; Lelli, KM; Maines, MD; Miralem, T; Torno, MD1
Nepveu, A; Santaguida, M1
Cho, JY; Correa, RG; Libermann, TA; Wang, Y; Zerbini, LF1
Lee, LC; Lee, YL; Leu, RJ; Shaw, JF1
Alibardi, L; Dalla Valle, L; Nardi, A; Niero, C; Toffolo, V; Toni, M1
Elias, BC; Rao, R; Seth, A; Sheth, P1
Amirkhanov, NV; Cardi, CA; Dimitrov, I; Lackey, JP; Lai, S; Opitz, AW; Thakur, ML; Wagner, NJ; Wickstrom, E; Zhang, K1
Anggono, V; Chau, N; Clayton, EL; Cousin, MA; Robinson, PJ; Smillie, KJ1
Cheng, H; Frost, JA; Kirken, RA; Nagy, ZS; Ross, JA1
Asanuma, H; Kashida, H; Murayama, K; Toda, T1
Brown, AL; Chen, Y; Chung, JH; Gellert, M; Gucek, M; Kim, MK; Lee, BS; Luckey, MA; Park, JH; Singh, SK; Sleckman, BP; Um, JH1
Colloms, SD; McPherson, AL; Olorunniji, FJ; Rosser, SJ; Smith, MCM; Stark, WM1
Jetson, RR; Kim, D; Krusemark, CJ1
Lüder, CGK; Meyer, T; Nast, R; Staab, J1

Other Studies

60 other study(ies) available for serine and oligonucleotides

ArticleYear
Three steps in conversion of large precursor RNA into serine and proline transfer RNAs.
    Proceedings of the National Academy of Sciences of the United States of America, 1975, Volume: 72, Issue:4

    Topics: Base Sequence; Coliphages; Crosses, Genetic; DNA Viruses; Escherichia coli; Nucleic Acid Conformation; Oligonucleotides; Proline; Recombination, Genetic; Ribonucleases; RNA, Transfer; RNA, Viral; Serine

1975
Partial degradation of transfer RNAs by different preparations of snake venom exonuclease.
    Biochimica et biophysica acta, 1975, Jul-23, Volume: 395, Issue:4

    Topics: Animals; Base Sequence; Chromatography, Affinity; Chromatography, DEAE-Cellulose; Electrophoresis, Polyacrylamide Gel; Exonucleases; Oligonucleotides; Ribonucleases; RNA, Transfer; Saccharomyces cerevisiae; Serine; Snake Venoms; Species Specificity; Urea

1975
Phosphorylation of specific serine residues within the acidic domain of the phosphoprotein of vesicular stomatitis virus regulates transcription in vitro.
    Journal of virology, 1992, Volume: 66, Issue:10

    Topics: Base Sequence; Blotting, Western; Capsid; Casein Kinases; Cell Line; Cloning, Molecular; Molecular Sequence Data; Oligonucleotides; Phosphorylation; Plasmids; Protein Kinases; Serine; Transcription, Genetic; Transcriptional Activation; Vesiculovirus; Viral Core Proteins; Viral Nonstructural Proteins

1992
Role of serine 214 and tyrosine 171, components of the S2 subsite of alpha-lytic protease, in catalysis.
    Biochemistry, 1992, Nov-17, Volume: 31, Issue:45

    Topics: Base Sequence; Blotting, Western; Catalysis; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Hydrogen-Ion Concentration; Kinetics; Molecular Sequence Data; Mutagenesis, Site-Directed; Oligonucleotides; Plasmids; Protein Conformation; Restriction Mapping; Serine; Serine Endopeptidases; Tyrosine

1992
Active-site serine mutants of the Streptomyces albus G beta-lactamase.
    The Biochemical journal, 1991, Aug-01, Volume: 277 ( Pt 3)

    Topics: Base Sequence; beta-Lactamases; Binding Sites; DNA Mutational Analysis; Hot Temperature; Hydrogen-Ion Concentration; Kinetics; Mercaptoethanol; Molecular Sequence Data; Oligonucleotides; Protein Denaturation; Serine; Streptomyces; Structure-Activity Relationship

1991
The cysP promoter of Salmonella typhimurium: characterization of two binding sites for CysB protein, studies of in vivo transcription initiation, and demonstration of the anti-inducer effects of thiosulfate.
    Journal of bacteriology, 1991, Volume: 173, Issue:18

    Topics: Bacterial Proteins; Base Sequence; Binding Sites; Cysteine; DNA, Bacterial; Gene Expression Regulation, Bacterial; Molecular Sequence Data; Oligonucleotides; Polymerase Chain Reaction; Promoter Regions, Genetic; Salmonella typhimurium; Sequence Homology, Nucleic Acid; Serine; Sulfides; Thiosulfates; Transcription, Genetic

1991
Site-directed mutagenesis studies on the recombinant thioesterase domain of chicken fatty acid synthase expressed in Escherichia coli.
    The Journal of biological chemistry, 1991, Nov-05, Volume: 266, Issue:31

    Topics: Animals; Base Sequence; Binding Sites; Blotting, Western; Chickens; Diethyl Pyrocarbonate; DNA Mutational Analysis; Escherichia coli; Fatty Acid Synthases; Hydrogen-Ion Concentration; Iodoacetamide; Molecular Sequence Data; Oligonucleotides; Recombinant Proteins; Serine; Thiolester Hydrolases

1991
Partial degradation of transfer RNAs and transfer RNA fragments by spleen phosphodiesterase as studied by disc electrophoretic methods.
    Biochimica et biophysica acta, 1972, Sep-14, Volume: 277, Issue:3

    Topics: Animals; Base Sequence; Chemical Phenomena; Chemistry; Densitometry; Electrophoresis, Disc; Escherichia coli; Kinetics; Methods; Oligonucleotides; Phenylalanine; Phosphoric Acids; Phosphoric Diester Hydrolases; RNA, Bacterial; RNA, Transfer; Serine; Spleen; Swine; Tyrosine

1972
Partial degradation of transfer RNAs by sheep kidney nuclease.
    Biochimica et biophysica acta, 1972, Sep-14, Volume: 277, Issue:3

    Topics: Adenine Nucleotides; Alkaline Phosphatase; Animals; Coliphages; Cytosine Nucleotides; Electrophoresis, Disc; Escherichia coli; Kidney; Kinetics; Magnesium; Oligonucleotides; Phenylalanine; Phosphoric Diester Hydrolases; Polynucleotides; Ribonucleases; RNA, Transfer; Saccharomyces cerevisiae; Serine; Sheep; Snakes; Tyrosine; Uracil Nucleotides; Valine; Venoms

1972
The nucleotide sequence of a serine transfer ribonucleic acid from Escherichia coli.
    The Journal of biological chemistry, 1973, Oct-10, Volume: 248, Issue:19

    Topics: Animals; Base Sequence; Chromatography, Ion Exchange; Chromatography, Paper; Chromatography, Thin Layer; Coliphages; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Nucleic Acid Conformation; Oligonucleotides; Pancreas; Phosphoric Diester Hydrolases; Phosphorus Radioisotopes; Polyribonucleotide Nucleotidyltransferase; Ribonucleases; Ribonucleotides; RNA, Bacterial; RNA, Transfer; RNA, Viral; Serine; Snakes; Spleen; Venoms

1973
Identification of tRNA precursor molecules made by phage T4.
    Nature: New biology, 1973, Nov-07, Volume: 246, Issue:149

    Topics: Base Sequence; Chromatography, Thin Layer; Coliphages; Electrophoresis, Polyacrylamide Gel; Genes; Hydrolysis; Lysogeny; Mutation; Oligonucleotides; Phosphorus Radioisotopes; Proline; Ribonucleases; RNA, Transfer; RNA, Viral; Serine; Transcription, Genetic

1973
Multiplicity of serine-specific transfer RNAs of brewer's and baker's yeast.
    Biochimica et biophysica acta, 1972, Sep-14, Volume: 277, Issue:3

    Topics: Acetates; Acylation; Amino Acids; Amino Acyl-tRNA Synthetases; Carbon Isotopes; Chromatography, DEAE-Cellulose; Clone Cells; Coliphages; Countercurrent Distribution; Ethanol; Genetic Code; Kinetics; Oligonucleotides; Ribonucleases; RNA, Transfer; Saccharomyces cerevisiae; Serine; Transfer RNA Aminoacylation; Tritium

1972
Recognition of nonsense codons in mammalian cells.
    Proceedings of the National Academy of Sciences of the United States of America, 1972, Volume: 69, Issue:10

    Topics: Acylation; Adenine Nucleotides; Amino Acyl-tRNA Synthetases; Animals; Arginine; Cattle; Cysteine; Escherichia coli; Genetic Code; Guanine Nucleotides; Liver; Oligonucleotides; Protein Binding; Ribosomes; RNA, Transfer; Serine; Suppression, Genetic; Tritium; Tryptophan; Uracil Nucleotides

1972
Studies on the formation of transfer ribonucleic acid-ribosome complexes. XXII. Binding of aminoacyl-oligonucleotides to ribosomes.
    The Journal of biological chemistry, 1972, Nov-10, Volume: 247, Issue:21

    Topics: Adenine Nucleotides; Alanine; Amino Acids; Amino Acyl-tRNA Synthetases; Ammonium Chloride; Chromatography, Ion Exchange; Cytosine Nucleotides; Electrophoresis, Paper; Escherichia coli; Ethanol; Glutamates; Leucine; Lysine; Magnesium; Oligonucleotides; Phenylalanine; Polynucleotides; Puromycin; Ribosomes; Serine; Tritium

1972
Studies on the formation of transfer ribonucleic acid-ribosome complexes. 23. Chloramphenicol, aminoacyl-oligonucleotides, and Escherichia coli ribosomes.
    The Journal of biological chemistry, 1972, Nov-10, Volume: 247, Issue:21

    Topics: Adenine Nucleotides; Amino Acids; Anti-Bacterial Agents; Binding Sites; Binding, Competitive; Carbon Isotopes; Chloramphenicol; Cytosine Nucleotides; Dialysis; Escherichia coli; Leucine; Lysine; Oligonucleotides; Phenylalanine; Polynucleotides; Puromycin; Ribosomes; Serine; Stereoisomerism; Tritium

1972
Half molecules of serine-specific transfer ribonucleic acids from yeast.
    Archives of biochemistry and biophysics, 1973, Volume: 155, Issue:2

    Topics: Base Sequence; Carbon Isotopes; Chromatography, DEAE-Cellulose; Chromatography, Ion Exchange; Cytosine Nucleotides; Electrophoresis, Disc; Electrophoresis, Paper; Escherichia coli; Kinetics; Nucleic Acid Conformation; Nucleic Acid Hybridization; Oligonucleotides; Phosphorus Isotopes; RNA Nucleotidyltransferases; RNA, Transfer; Saccharomyces cerevisiae; Serine; Spectrophotometry, Ultraviolet; Time Factors; Transfer RNA Aminoacylation

1973
High-resolution NMR investigation of base pairing structure of transfer RNA.
    Annals of the New York Academy of Sciences, 1973, Dec-31, Volume: 222

    Topics: Arginine; Base Sequence; Binding Sites; Chromatography, Gel; Escherichia coli; Glutamates; Hot Temperature; Magnetic Resonance Spectroscopy; Methionine; Nucleic Acid Conformation; Oligonucleotides; Phenylalanine; Ribonucleases; RNA, Bacterial; RNA, Transfer; Saccharomyces cerevisiae; Serine; Species Specificity; Tryptophan; Tyrosine

1973
Preparation of transfer RNA fragments by limited degradation with spleen exonuclease.
    Methods in enzymology, 1974, Volume: 29

    Topics: Alkaline Phosphatase; Animals; Base Sequence; Chromatography, Gel; Densitometry; Electrophoresis, Disc; Escherichia coli; Evaluation Studies as Topic; Exonucleases; Methods; Oligonucleotides; Phenylalanine; Ribonucleotides; RNA, Transfer; Saccharomyces cerevisiae; Serine; Spectrophotometry, Ultraviolet; Spleen; Swine

1974
[Mg 2+ -catalyzed specific splitting of tRNA].
    Biochimica et biophysica acta, 1973, Feb-23, Volume: 299, Issue:1

    Topics: Electrophoresis, Disc; Hydrogen-Ion Concentration; Kinetics; Magnesium; Nucleic Acid Conformation; Oligonucleotides; Phenylalanine; RNA, Transfer; Serine; Spectrophotometry, Ultraviolet; Urea; Uridine

1973
Stabilizing and destabilizing effects of placing beta-branched amino acids in protein alpha-helices.
    Biochemistry, 1994, Oct-11, Volume: 33, Issue:40

    Topics: Acetonitriles; Amino Acids, Branched-Chain; Asparagine; Bacteriophage T4; Base Sequence; Circular Dichroism; Computer Simulation; Drug Stability; Electrophoresis, Polyacrylamide Gel; Leucine; Magnetic Resonance Spectroscopy; Models, Molecular; Molecular Sequence Data; Muramidase; Mutation; Oligonucleotides; Protein Structure, Secondary; Serine; Valine

1994
Alteration of the enzymatic specificity of human angiogenin by site-directed mutagenesis.
    Biochemistry, 1993, Mar-09, Volume: 32, Issue:9

    Topics: Angiogenesis Inducing Agents; Animals; Base Sequence; Chick Embryo; Glutamates; Glutamic Acid; Humans; Molecular Sequence Data; Mutagenesis, Site-Directed; Oligonucleotides; Proteins; Ribonuclease, Pancreatic; Serine; Substrate Specificity; Threonine

1993
Site-directed mutagenesis of the tick-borne encephalitis virus NS3 gene reveals the putative serine protease domain of the NS3 protein.
    FEBS letters, 1993, Aug-09, Volume: 328, Issue:1-2

    Topics: Amino Acid Sequence; Base Sequence; DNA, Viral; Electrophoresis, Polyacrylamide Gel; Encephalitis Viruses, Tick-Borne; Gene Expression Regulation, Enzymologic; Genes, Viral; Molecular Sequence Data; Mutagenesis, Site-Directed; Oligonucleotides; Plasmids; Protein Biosynthesis; RNA Helicases; Serine; Serine Endopeptidases; Transcription, Genetic; Viral Nonstructural Proteins

1993
Catalytic properties and stability of a Pseudomonas sp.101 formate dehydrogenase mutants containing Cys-255-Ser and Cys-255-Met replacements.
    Biochemical and biophysical research communications, 1993, Apr-30, Volume: 192, Issue:2

    Topics: Amino Acid Sequence; Base Sequence; Catalysis; Cysteine; Dithionitrobenzoic Acid; Enzyme Stability; Formate Dehydrogenases; Kinetics; Mercury; Methionine; Molecular Sequence Data; Mutation; Oligonucleotides; Pseudomonas; Sequence Homology, Amino Acid; Serine

1993
Generation of diverse single-chain proteins using a universal (Gly4-Ser)3 encoding oligonucleotide.
    BioTechniques, 1995, Volume: 19, Issue:5

    Topics: Base Sequence; Codon; Electrophoresis, Agar Gel; Glycine; Molecular Sequence Data; Nucleic Acid Hybridization; Oligonucleotides; Oligopeptides; Peptide Biosynthesis; Peptides; Polymerase Chain Reaction; Serine

1995
Serine319 and 321 are functional in isocitrate lyase from Escherichia coli.
    Current microbiology, 1997, Volume: 34, Issue:4

    Topics: Alanine; Asparagine; Cysteine; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Gene Expression Regulation, Bacterial; Glycine; Histidine; Isocitrate Lyase; Isocitrates; Kinetics; Magnesium; Mutagenesis, Site-Directed; Oligonucleotides; Plasmids; Proline; Sequence Alignment; Serine; Threonine

1997
In vivo site-directed mutagenesis of the factor IX gene by chimeric RNA/DNA oligonucleotides.
    Nature medicine, 1998, Volume: 4, Issue:3

    Topics: Animals; Biological Transport; Cell Separation; Cells, Cultured; Cloning, Molecular; Factor IX; Gene Targeting; Liver; Male; Mutagenesis, Site-Directed; Oligodeoxyribonucleotides; Oligonucleotides; Oligoribonucleotides; Rats; Rats, Sprague-Dawley; Sequence Analysis, DNA; Serine; Transfection

1998
Characterization of the single-stranded DNA binding protein encoded by the vaccinia virus I3 gene.
    Journal of virology, 1998, Volume: 72, Issue:4

    Topics: Amino Acid Sequence; Bacteriophage M13; Cell Line; Chromatography; DNA-Binding Proteins; DNA, Single-Stranded; Fluorescent Antibody Technique, Indirect; Genes, Viral; HeLa Cells; Humans; Molecular Sequence Data; Molecular Weight; Mutagenesis; Oligonucleotides; Phosphoproteins; Phosphorylation; Recombinant Fusion Proteins; Sequence Homology, Amino Acid; Serine; Sodium Chloride; Vaccinia virus; Viral Proteins

1998
RNA binding activity of heterodimeric splicing factor U2AF: at least one RS domain is required for high-affinity binding.
    Molecular and cellular biology, 1998, Volume: 18, Issue:7

    Topics: Adenoviridae; Animals; Arginine; Binding Sites; Dimerization; Drosophila melanogaster; Humans; Nuclear Proteins; Oligonucleotides; Pyrimidines; Recombinant Fusion Proteins; Ribonucleoproteins; RNA; RNA Splicing; RNA, Viral; Serine; Splicing Factor U2AF; Structure-Activity Relationship

1998
Nucleotide exchange in genomic DNA of rat hepatocytes using RNA/DNA oligonucleotides. Targeted delivery of liposomes and polyethyleneimine to the asialoglycoprotein receptor.
    The Journal of biological chemistry, 1999, Apr-09, Volume: 274, Issue:15

    Topics: Animals; Asialoglycoprotein Receptor; Asialoglycoproteins; Base Sequence; DNA; Drug Delivery Systems; Factor IX; Gene Transfer Techniques; Liposomes; Liver; Male; Microscopy, Electron; Molecular Sequence Data; Oligonucleotides; Polyethyleneimine; Rats; Rats, Sprague-Dawley; Receptors, Cell Surface; Recombinant Fusion Proteins; RNA; Sequence Analysis, DNA; Serine

1999
Glutamic acid-65 is an essential residue for catalysis in Proteus mirabilis glutathione S-transferase B1-1.
    The Biochemical journal, 2002, Apr-01, Volume: 363, Issue:Pt 1

    Topics: Aspartic Acid; Catalysis; Circular Dichroism; Dinitrochlorobenzene; Glutamic Acid; Glutathione; Glutathione Transferase; Kinetics; Mutagenesis, Site-Directed; Oligonucleotides; Protein Denaturation; Protein Structure, Tertiary; Proteus mirabilis; Serine; Spectrometry, Fluorescence; Temperature; Time Factors

2002
Synthesis of Ser-His-Gly.DNA conjugates.
    Sheng wu hua xue yu sheng wu wu li xue bao Acta biochimica et biophysica Sinica, 2002, Volume: 34, Issue:4

    Topics: DNA; Glycine; Histidine; Nucleic Acid Conformation; Oligonucleotides; Oligopeptides; Serine; Spectrometry, Mass, Electrospray Ionization; Spectrophotometry, Ultraviolet

2002
Role of dynamic interactions in effective signal transfer for Gbeta stimulation of phospholipase C-beta 2.
    The Journal of biological chemistry, 2002, Dec-20, Volume: 277, Issue:51

    Topics: Amino Acid Sequence; Animals; Arginine; Dose-Response Relationship, Drug; Enzyme-Linked Immunosorbent Assay; GTP-Binding Proteins; Humans; Insecta; Isoenzymes; Kinetics; Molecular Sequence Data; Oligonucleotides; Peptide Library; Peptides; Phospholipase C beta; Plasmids; Proline; Protein Binding; Protein Conformation; Serine; Signal Transduction; Spectrometry, Fluorescence; Type C Phospholipases; Valine

2002
Activation of RAF-1 through Ras and protein kinase Calpha mediates 1alpha,25(OH)2-vitamin D3 regulation of the mitogen-activated protein kinase pathway in muscle cells.
    The Journal of biological chemistry, 2003, Jan-24, Volume: 278, Issue:4

    Topics: Animals; Cell Division; Cells, Cultured; Chick Embryo; Cholecalciferol; Electrophoresis, Polyacrylamide Gel; Enzyme Activation; Immunoblotting; Indoles; Isoenzymes; Maleimides; MAP Kinase Signaling System; Models, Biological; Muscles; Naphthalenes; Oligonucleotides; Oligonucleotides, Antisense; Phosphorylation; Precipitin Tests; Protein Kinase C; Protein Kinase C-alpha; Proto-Oncogene Proteins c-raf; ras Proteins; RNA, Messenger; Serine; Time Factors; Transfection

2003
Molecular modeling of diastereoisomeric aggregates of l/d ser/histamine amide with 5'-TpTpdC-3'.
    Journal of molecular modeling, 2003, Volume: 9, Issue:2

    Topics: Amides; Binding Sites; Histamine; Hydrogen Bonding; Hydrolysis; Models, Molecular; Molecular Conformation; Oligonucleotides; Oligopeptides; Serine; Stereoisomerism

2003
Phosphorylation of p40AUF1 regulates binding to A + U-rich mRNA-destabilizing elements and protein-induced changes in ribonucleoprotein structure.
    The Journal of biological chemistry, 2003, Aug-29, Volume: 278, Issue:35

    Topics: Amino Acid Sequence; Anisotropy; Cyclic AMP-Dependent Protein Kinases; Dimerization; Fluorescence Resonance Energy Transfer; Glycogen Synthase Kinase 3; Glycogen Synthase Kinase 3 beta; Heterogeneous Nuclear Ribonucleoprotein D0; Heterogeneous-Nuclear Ribonucleoprotein D; Histidine; Humans; Kinetics; Models, Chemical; Models, Statistical; Molecular Sequence Data; Nucleic Acid Conformation; Oligonucleotides; Phosphorylation; Protein Binding; Protein Conformation; Protein Processing, Post-Translational; Protein Structure, Tertiary; Recombinant Proteins; Ribonucleoproteins; RNA; RNA, Messenger; Serine; Signal Transduction; Spectrometry, Fluorescence; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Thermodynamics; Time Factors; Tumor Cells, Cultured

2003
Interleukin 1 (IL-1) induces the activation of Stat3.
    Advances in experimental medicine and biology, 2003, Volume: 534

    Topics: Base Sequence; DNA-Binding Proteins; Electrophoretic Mobility Shift Assay; Interleukin-1; Molecular Sequence Data; Oligonucleotides; Phosphorylation; Serine; STAT3 Transcription Factor; Trans-Activators; Tyrosine

2003
Role of His-16 in turnover of T4 pyrimidine dimer glycosylase.
    The Journal of biological chemistry, 2004, Jan-30, Volume: 279, Issue:5

    Topics: Alanine; Aspartic Acid; Cell Survival; Cysteine; Dimerization; DNA; DNA Glycosylases; DNA Repair; Escherichia coli; Glutamic Acid; Histidine; Kinetics; Lysine; Models, Biological; Mutagenesis, Site-Directed; Mutation; Oligonucleotides; Phenotype; Plasmids; Serine; Time Factors; Ultraviolet Rays

2004
The canonical methionine 392 of matrix metalloproteinase 2 (gelatinase A) is not required for catalytic efficiency or structural integrity: probing the role of the methionine-turn in the metzincin metalloprotease superfamily.
    The Journal of biological chemistry, 2004, Apr-09, Volume: 279, Issue:15

    Topics: Animals; Binding Sites; Catalysis; CHO Cells; Collagen; Cricetinae; Dose-Response Relationship, Drug; Edetic Acid; Electrophoresis, Polyacrylamide Gel; Histidine; Humans; Ions; Kinetics; Leucine; Matrix Metalloproteinase 2; Methionine; Mutagenesis, Site-Directed; Mutation; Oligonucleotides; Peptides; Phenylmercuric Acetate; Protein Conformation; Protein Structure, Tertiary; Serine; Temperature; Time Factors; Trypsin; Zinc

2004
Dynamin GTPase domain mutants that differentially affect GTP binding, GTP hydrolysis, and clathrin-mediated endocytosis.
    The Journal of biological chemistry, 2004, Sep-24, Volume: 279, Issue:39

    Topics: Adenoviridae; Alanine; Baculoviridae; Binding Sites; Chromatography, Gel; Clathrin; Dynamins; Endocytosis; GTP Phosphohydrolases; Guanosine Triphosphate; Humans; Hydrolysis; Kinetics; Lipids; Models, Chemical; Mutation; Oligonucleotides; Point Mutation; Protein Binding; Protein Conformation; Protein Structure, Tertiary; Serine; Temperature; Threonine; Time Factors; Transferrin

2004
Phosphorylation of IQGAP1 modulates its binding to Cdc42, revealing a new type of rho-GTPase regulator.
    The Journal of biological chemistry, 2004, Nov-19, Volume: 279, Issue:47

    Topics: Algorithms; Amino Acid Sequence; Binding Sites; Blotting, Western; Buffers; cdc42 GTP-Binding Protein; Cell Communication; Cell Line; Cell Line, Tumor; Gene Expression Regulation; Glutathione Transferase; Guanine Nucleotide Exchange Factors; Guanosine Diphosphate; Guanosine Triphosphate; Humans; Immunoprecipitation; Mass Spectrometry; Molecular Sequence Data; Mutagenesis; Nucleotides; Oligonucleotides; Phosphorylation; Plasmids; Protein Binding; Protein Conformation; Protein Kinase C; Protein Kinase C-epsilon; Protein Structure, Tertiary; rac1 GTP-Binding Protein; ras GTPase-Activating Proteins; Recombinant Proteins; rho GTP-Binding Proteins; Sequence Homology, Amino Acid; Serine; Signal Transduction; Software; Time Factors

2004
Mcm2 is a direct substrate of ATM and ATR during DNA damage and DNA replication checkpoint responses.
    The Journal of biological chemistry, 2004, Dec-17, Volume: 279, Issue:51

    Topics: Amino Acid Sequence; Animals; Ataxia Telangiectasia Mutated Proteins; Carrier Proteins; Cell Cycle Proteins; Cell Nucleus; Cell-Free System; Chromatin; Chromosomes; Cloning, Molecular; DNA; DNA Damage; DNA-Binding Proteins; DNA, Complementary; Glutathione Transferase; Immunoblotting; Immunoprecipitation; Minichromosome Maintenance Complex Component 2; Models, Biological; Molecular Sequence Data; Oligonucleotides; Phosphorylation; Protein Binding; Protein Serine-Threonine Kinases; Protein Structure, Tertiary; Recombinant Proteins; Sequence Homology, Amino Acid; Serine; Tumor Suppressor Proteins; Xenopus; Xenopus Proteins

2004
Doxorubicin activates ATM-dependent phosphorylation of multiple downstream targets in part through the generation of reactive oxygen species.
    The Journal of biological chemistry, 2004, Dec-17, Volume: 279, Issue:51

    Topics: Acetylcysteine; Androstadienes; Antibiotics, Antineoplastic; Antineoplastic Agents; Ascorbic Acid; Ataxia Telangiectasia Mutated Proteins; Binding Sites; Cell Cycle Proteins; Cell Line; Cell Line, Tumor; Cell Nucleus; DNA; DNA Damage; DNA-Binding Proteins; Dose-Response Relationship, Drug; Doxorubicin; Enzyme Inhibitors; Histones; Humans; Hydroxyl Radical; Image Processing, Computer-Assisted; Immunoblotting; Immunoprecipitation; Microscopy, Fluorescence; Oligonucleotides; Phosphorylation; Protein Binding; Protein Serine-Threonine Kinases; Radiation, Ionizing; Reactive Oxygen Species; Serine; Signal Transduction; Threonine; Time Factors; Transcription, Genetic; Tumor Suppressor Protein p53; Tumor Suppressor Proteins; Wortmannin

2004
New method to prepare peptide-oligonucleotide conjugates through glyoxylic oxime formation.
    The Journal of organic chemistry, 2004, Nov-26, Volume: 69, Issue:24

    Topics: Cross-Linking Reagents; Glyoxylates; Oligonucleotides; Oximes; Peptide Nucleic Acids; Peptides; Serine

2004
Gene 33 is an endogenous inhibitor of epidermal growth factor (EGF) receptor signaling and mediates dexamethasone-induced suppression of EGF function.
    The Journal of biological chemistry, 2005, Jan-28, Volume: 280, Issue:4

    Topics: Adaptor Proteins, Signal Transducing; Adenoviridae; Amino Acid Sequence; Animals; Blotting, Northern; Blotting, Western; Carrier Proteins; Cell Line; Dexamethasone; DNA, Complementary; Electrophoresis, Polyacrylamide Gel; Epidermal Growth Factor; ErbB Receptors; Extracellular Signal-Regulated MAP Kinases; Glucocorticoids; Glutathione Transferase; Guanosine Triphosphate; Humans; Immunoprecipitation; Intracellular Signaling Peptides and Proteins; Models, Genetic; Molecular Sequence Data; Oligonucleotides; Phosphorylation; Platelet-Derived Growth Factor; Protein Binding; Protein Structure, Tertiary; Rats; RNA Interference; RNA, Double-Stranded; Sequence Homology, Amino Acid; Serine; Signal Transduction; Time Factors; Transfection; Tumor Suppressor Proteins

2005
Mutation of regulatory serines of rat tyrosine hydroxylase to glutamate: effects on enzyme stability and activity.
    Archives of biochemistry and biophysics, 2005, Feb-15, Volume: 434, Issue:2

    Topics: Amino Acid Sequence; Animals; Cyclic AMP-Dependent Protein Kinases; Dopamine; Genetic Variation; Glutamic Acid; Kinetics; Molecular Sequence Data; Mutagenesis; Oligonucleotides; Phosphorylation; Plasmids; Protein Conformation; Protein Structure, Tertiary; Rats; Serine; Spectrophotometry; Temperature; Time Factors; Tyrosine 3-Monooxygenase

2005
Glycogen synthase kinase-3beta phosphorylation of MAP1B at Ser1260 and Thr1265 is spatially restricted to growing axons.
    Journal of cell science, 2005, Mar-01, Volume: 118, Issue:Pt 5

    Topics: Animals; Axons; Binding Sites; Blotting, Western; Cell Proliferation; Cerebral Cortex; COS Cells; DNA, Complementary; Electrophoresis, Polyacrylamide Gel; Embryo, Mammalian; Epitopes; Gene Expression Regulation, Developmental; Glutathione Transferase; Glycogen Synthase Kinase 3; Glycogen Synthase Kinase 3 beta; Immunoblotting; Mice; Microscopy, Fluorescence; Microtubule-Associated Proteins; Microtubules; Mutagenesis, Site-Directed; Mutation; Neurons; Oligonucleotides; Peptides; Phosphorylation; Plasmids; Point Mutation; Protein Binding; Rats; Rats, Wistar; Recombinant Proteins; Serine; Threonine; Time Factors; Transfection; Valine

2005
Small interference RNA-mediated gene silencing of human biliverdin reductase, but not that of heme oxygenase-1, attenuates arsenite-mediated induction of the oxygenase and increases apoptosis in 293A kidney cells.
    The Journal of biological chemistry, 2005, Apr-29, Volume: 280, Issue:17

    Topics: Acetylcysteine; Apoptosis; Apoptosis Regulatory Proteins; Arsenites; Biliverdine; Blotting, Northern; Blotting, Western; Cell Line; Cell Nucleus; Cell Survival; Cytochromes c; Enzyme-Linked Immunosorbent Assay; Flow Cytometry; Gene Silencing; Heme; Heme Oxygenase (Decyclizing); Heme Oxygenase-1; Humans; Luciferases; Membrane Glycoproteins; Membrane Proteins; Oligonucleotides; Oxidative Stress; Oxidoreductases Acting on CH-CH Group Donors; Oxygen; Phosphorylation; Poly(ADP-ribose) Polymerases; Promoter Regions, Genetic; Protein Binding; Protein Biosynthesis; Receptors, TNF-Related Apoptosis-Inducing Ligand; Receptors, Tumor Necrosis Factor; Retroviridae; RNA, Messenger; RNA, Small Interfering; Serine; Sodium Compounds; Threonine; Time Factors; TNF-Related Apoptosis-Inducing Ligand; Transcription Factor AP-1; Transfection; Tumor Necrosis Factor-alpha

2005
Differential regulation of CDP/Cux p110 by cyclin A/Cdk2 and cyclin A/Cdk1.
    The Journal of biological chemistry, 2005, Sep-23, Volume: 280, Issue:38

    Topics: Amino Acid Motifs; Animals; Binding Sites; Cathepsin L; Cathepsins; CDC2 Protein Kinase; Cell Cycle; Cell Cycle Proteins; Cell Nucleus; Cyclin A; Cysteine Endopeptidases; DNA; G2 Phase; Gene Expression Regulation; Glutathione Transferase; Homeodomain Proteins; Immunoblotting; Luciferases; Mice; Models, Genetic; NIH 3T3 Cells; Nuclear Proteins; Oligonucleotides; Phosphorylation; Plasmids; Promoter Regions, Genetic; Protein Binding; Protein Structure, Tertiary; Recombinant Fusion Proteins; Recombinant Proteins; Repressor Proteins; S Phase; Saccharomyces cerevisiae Proteins; Serine; Transcription, Genetic

2005
Blockage of NF-kappaB induces serine 15 phosphorylation of mutant p53 by JNK kinase in prostate cancer cells.
    Cell cycle (Georgetown, Tex.), 2005, Volume: 4, Issue:9

    Topics: Adenoviridae; Anthracenes; Antineoplastic Agents; Apoptosis; Blotting, Western; Cell Cycle Proteins; Cell Line, Tumor; Cell Survival; Cytoplasm; DNA; Enzyme-Linked Immunosorbent Assay; Gene Expression Regulation, Neoplastic; Genes, p53; Humans; Immunoprecipitation; Male; MAP Kinase Kinase 4; Mutation; NF-kappa B; Nuclear Proteins; Oligonucleotides; Phosphorylation; Plasmids; Prostatic Neoplasms; Protein Binding; Reverse Transcriptase Polymerase Chain Reaction; RNA, Small Interfering; Serine; Signal Transduction; Temperature; Transfection; Tumor Suppressor Protein p53

2005
Functional role of catalytic triad and oxyanion hole-forming residues on enzyme activity of Escherichia coli thioesterase I/protease I/phospholipase L1.
    The Biochemical journal, 2006, Jul-01, Volume: 397, Issue:1

    Topics: Alanine; Asparagine; Catalytic Domain; Crystallography; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Escherichia coli Proteins; Glycine; Kinetics; Lysophospholipase; Magnetic Resonance Spectroscopy; Mutagenesis, Site-Directed; Oligonucleotides; Periplasmic Proteins; Protein Conformation; Serine

2006
Cloning and characterization of scale beta-keratins in the differentiating epidermis of geckoes show they are glycine-proline-serine-rich proteins with a central motif homologous to avian beta-keratins.
    Developmental dynamics : an official publication of the American Association of Anatomists, 2007, Volume: 236, Issue:2

    Topics: Amino Acid Motifs; Amino Acid Sequence; Animals; Base Sequence; beta-Keratins; Blotting, Northern; Blotting, Southern; Cloning, Molecular; DNA, Complementary; Epidermis; Gene Expression; Glycine; Immunohistochemistry; In Situ Hybridization; Lizards; Molecular Sequence Data; Oligonucleotides; Proline; Reverse Transcriptase Polymerase Chain Reaction; Sequence Analysis, DNA; Sequence Homology; Serine

2007
Protein phosphatases 2A and 1 interact with occludin and negatively regulate the assembly of tight junctions in the CACO-2 cell monolayer.
    The Journal of biological chemistry, 2007, Apr-13, Volume: 282, Issue:15

    Topics: Caco-2 Cells; Calcium; Enzyme Activation; Gene Expression Regulation, Enzymologic; Humans; Membrane Proteins; Occludin; Oligonucleotides; Phosphoprotein Phosphatases; Phosphoproteins; Protein Binding; RNA, Small Interfering; Serine; Threonine; Tight Junctions; Zonula Occludens-1 Protein

2007
Design of (Gd-DO3A)n-polydiamidopropanoyl-peptide nucleic acid-D(Cys-Ser-Lys-Cys) magnetic resonance contrast agents.
    Biopolymers, 2008, Volume: 89, Issue:12

    Topics: Anthracenes; Base Sequence; Chelating Agents; Computer Simulation; Cysteine; Gadolinium; Gadolinium DTPA; Lysine; Magnetic Resonance Imaging; Models, Molecular; Molecular Conformation; Oligonucleotides; Oligopeptides; Peptide Nucleic Acids; Serine; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

2008
The phospho-dependent dynamin-syndapin interaction triggers activity-dependent bulk endocytosis of synaptic vesicles.
    The Journal of neuroscience : the official journal of the Society for Neuroscience, 2009, Jun-17, Volume: 29, Issue:24

    Topics: Action Potentials; Analysis of Variance; Animals; Animals, Newborn; Calcineurin; Calcium; Carrier Proteins; Cells, Cultured; Cerebellum; Cytoskeletal Proteins; Dextrans; Dynamin I; Electric Stimulation; Endocytosis; GTP Phosphohydrolases; Horseradish Peroxidase; Hydrazones; Microscopy, Immunoelectron; Mutagenesis, Site-Directed; Neural Inhibition; Neurons; Oligonucleotides; Phosphorylation; Potassium Chloride; Rats; Rats, Sprague-Dawley; Serine; Synaptic Vesicles; Synaptophysin; Time Factors; Transfection

2009
Protein phosphatase 2A regulates interleukin-2 receptor complex formation and JAK3/STAT5 activation.
    The Journal of biological chemistry, 2010, Feb-05, Volume: 285, Issue:6

    Topics: Blotting, Western; Cell Line, Tumor; Cells, Cultured; Electrophoresis, Polyacrylamide Gel; Humans; Immunoprecipitation; Interleukin-2; Janus Kinase 3; Lymphocytes; Oligonucleotides; Phosphorylation; Promoter Regions, Genetic; Protein Binding; Protein Phosphatase 1; Protein Phosphatase 2; Receptors, Interleukin-2; Serine; STAT5 Transcription Factor; Tumor Suppressor Proteins; Tyrosine

2010
Control of the chirality and helicity of oligomers of serinol nucleic acid (SNA) by sequence design.
    Angewandte Chemie (International ed. in English), 2011, Feb-07, Volume: 50, Issue:6

    Topics: Base Sequence; Circular Dichroism; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Propanolamines; Propylene Glycols; Serine; Stereoisomerism; Transition Temperature

2011
Metabolic sensor AMPK directly phosphorylates RAG1 protein and regulates V(D)J recombination.
    Proceedings of the National Academy of Sciences of the United States of America, 2013, Jun-11, Volume: 110, Issue:24

    Topics: Amino Acid Sequence; AMP-Activated Protein Kinases; Animals; Cells, Cultured; DNA-Binding Proteins; HEK293 Cells; Homeodomain Proteins; Humans; Immunoblotting; Mice; Mice, Knockout; Mutation; Nuclear Proteins; Oligonucleotides; Phosphorylation; Sequence Homology, Amino Acid; Serine; Substrate Specificity; V(D)J Recombination

2013
Control of serine integrase recombination directionality by fusion with the directionality factor.
    Nucleic acids research, 2017, Aug-21, Volume: 45, Issue:14

    Topics: Amino Acid Sequence; Attachment Sites, Microbiological; Bacteriophages; Gene Fusion; Integrases; Models, Genetic; Oligonucleotides; Plasmids; Recombinant Fusion Proteins; Recombination, Genetic; Serine; Viral Proteins

2017
A DNA-assisted immunoassay for enzyme activity via a DNA-linked, activity-based probe.
    Chemical communications (Cambridge, England), 2017, Aug-22, Volume: 53, Issue:68

    Topics: Base Sequence; DNA; DNA Probes; Hydrolases; Immunoassay; Oligonucleotides; Phosphates; Polymerase Chain Reaction; Serine

2017
Toxoplasma gondii stabilises tetrameric complexes of tyrosine-phosphorylated signal transducer and activator of transcription-1 and leads to its sustained and promiscuous DNA binding.
    Cellular microbiology, 2018, Volume: 20, Issue:11

    Topics: Animals; Cell Nucleus; DNA; Host-Parasite Interactions; Interferon-gamma; Mice; Oligonucleotides; Phosphorylation; Protein Multimerization; Protozoan Proteins; RAW 264.7 Cells; Serine; STAT1 Transcription Factor; Toxoplasma; Toxoplasmosis; Tyrosine

2018