pyrophosphate and 1-10-phenanthroline

The reaction in water of Cu(NO(3))(2)·2.5H(2)O with 2,2'-bipyridine (bipy), 1,10-phenanthroline (phen), or 1,10-phenanthroline-5-amine (phenam), and sodium pyrophosphate (Na(4)P(2)O(7)), at various pHs, afforded three new copper(II)-pyrophosphate complexes, namely, {[Cu(bipy)(cis-H(2)P(2)O(7))](2)}·3H(2)O (1a), {[Cu(phen)(H(2)O)](4)(HP(2)O(7))(2)}(ClO(4))(2)·4H(2)O (2), and {[Cu(2)(phenam)(2)(P(2)O(7))](2)·25H(2)O}(n) (3). A solvent free crystalline phase of 1a was also isolated with formula {[Cu(bipy)(trans-H(2)P(2)O(7))](2)} (1b), which can be regarded as a pseudo-polymorph of 1a. Single crystal X-ray analyses revealed these compounds to have uncommon molecular architectures, with 3 being an unprecedented pyrophosphate-containing two-dimensional (2D) polymer. Compounds 1a/1b and 2 are discrete di- and tetra-nuclear complexes, respectively. The cationic {[Cu(phen)(H(2)O)](4)(HP(2)O(7))(2)}(2+) unit in 2 presents a unique quasi-flat structure, held together by solely in-plane pyrophosphate bridging modes (short O(eq)-P-O(eq) and long O(eq)-P-O-P-O(eq) pathways), a coordination arrangement also not previously reported. A different tetranuclear copper(II)-pyrophosphate arrangement is found in 3, with two classically bridged dimers (O(eq)-P-O(eq) pathway) joined together by auxiliary equatorial-axial μ-O pyrophosphate bridges. Here, the bidimensionality is reached through bridging phenam ligands, which provide further inter-"tetramer" metal-metal connections [(N,N')(eq)-(N'')(ax) pathway], leading to the formation of an expanded covalent network based on the [Cu(2)(phenam)(2)(P(2)O(7))](2) moiety. Variable-temperature magnetic susceptibility measurements on polycrystalline samples of 2 and 3 revealed net antiferromagnetic coupling between metal centers with J(2a) = -7.9(2) cm(-1), J(2b) = -46.9(3) cm(-1), J(2c) = 0 cm(-1) in 2 (H = -J(2a)[S(Cu(1))·S(Cu(2)) + S(Cu(1a))·S(Cu(2a))] - J(2b)[S(Cu(1))·S(Cu(2a)) + S(Cu(1a))·S(Cu(2))] - J(2c)S(Cu(2))·S(Cu(2a))), and J(3a) = -87.9(2) cm(-1), J(3b) = -5(1) cm(-1) and J(3c) = +5(3) cm(-1) in 3 (H = -J(3a)[S(Cu(1))·S(Cu(2)) + S(Cu(1a))·S(Cu(2a))] - J(3b)[S(Cu(1))·S(Cu(2a)) + S(Cu(1a))·S(Cu(2))] - J(3c)S(Cu(2))·S(Cu(2a))). For 1a, a net ferromagnetic coupling is observed with J(1a) = +0.86(1) cm(-1) (H = -J S(A)·S(B) + S(A)·D· S(B) + βH (g(A)S(A) + g(B)S(B)). This is the first example of ferromagnetic coupling in pyrophosphate-complexes reported to date. A structure-function correlation study focusing on magnetic exchang

Topics: 2,2'-Dipyridyl; Coordination Complexes; Copper; Crystallography, X-Ray; Dimerization; Diphosphates; Hydrogen-Ion Concentration; Magnetics; Mathematical Computing; Models, Molecular; Molecular Structure; Phenanthrolines; Polymers; Structure-Activity Relationship; Thermodynamics

The enzyme reverse transcriptase (RT) is crucial in the early steps of the life cycle of retroviruses. We have expressed in bacteria the RTs from human immunodeficiency viruses (HIV) types 1 and 2 in order to study the structural-functional relationships of these two multifunctional enzymes that share a relatively high degree of amino acid sequence homology. For comparison purposes, we have analyzed several catalytic functions of both enzymes. The two HIV RTs show a high similarity in many aspects studied but exhibit profound differences in several other properties. For instance, the specific RNase H activity of HIV-2 RT is about 10 times lower than the corresponding activity of HIV-1 RT. There are also significant dissimilarities between some of the apparent Km values calculated for the DNA polymerizing functions of both enzymes. Furthermore, the heat stability of the DNA polymerizing activity of HIV-2 RT is about 15-fold higher than that of HIV-1 RT. On the other hand, the susceptibility of the RNase H activities of the two enzymes to heat inactivation was found to be similar. Other treatments also enable discrimination between the RNase H and DNA polymerizing catalytic properties of the two enzymes (although both reverse transcriptases respond similarily). Thus, the RNase H activity was inactivated by N-ethylmaleimide, suggesting the possible involvement of cysteine residues in performing this activity, whereas the DNA polymerizing functions of the two enzymes were fully resistant to this chemical modification. The zinc chelator 1,10-phenanthroline affected the DNA polymerase activities of both enzymes to a significantly higher extent than the RNase H activity. In all, the two HIV RTs were shown to be substantially different one from the other in several of their properties and also distinct from other RTs thus far studied.

Topics: Catalysis; Diphosphates; DNA-Directed DNA Polymerase; Endoribonucleases; Escherichia coli; Ethylmaleimide; Gene Expression Regulation, Bacterial; Genes, Bacterial; HIV-1; HIV-2; Hot Temperature; Hydrogen-Ion Concentration; Phenanthrolines; Pyridoxal Phosphate; Reverse Transcriptase Inhibitors; Ribonuclease H; RNA-Directed DNA Polymerase; Rose Bengal