Page last updated: 2024-08-23

pyrene and oligonucleotides

pyrene has been researched along with oligonucleotides in 41 studies

Research

Studies (41)

TimeframeStudies, this research(%)All Research%
pre-19900 (0.00)18.7374
1990's1 (2.44)18.2507
2000's12 (29.27)29.6817
2010's25 (60.98)24.3611
2020's3 (7.32)2.80

Authors

AuthorsStudies
Dobrikov, MI; Gaĭdamakov, SA; Koshkin, AA; Luk''ianchuk, NP; Shishkin, GV; Vlasov, VV1
Dobrikov, M; Komarova, N; Kostenko, E; Petyuk, V; Pyshnyi, D; Vlassov, V; Zenkova, M1
Amann, N; Fiebig, T; Pandurski, E; Wagenknecht, HA1
Juskowiak, B; Nagatoishi, S; Nojima, T; Takenaka, S1
Iwase, R; Murakami, A; Namie, Y; Yamaoka, T1
Nishiza, K; Okamoto, A; Saito, I1
Joo, T; Kim, BH; Rhee, H; Seo, YJ1
Fratczak, A; Kierzek, E; Kierzek, R; Pasternak, A; Pasternak, K; Turner, DH1
Chattopadhyaya, J; Honcharenko, D; Zhou, C1
Di Pasquale, F; Ehrenschwender, T; Marx, A; Wagenknecht, HA; Wanninger-Weiss, C1
Hayashida, H; Juskowiak, B; Paczesny, J; Takenaka, S1
Bing, T; Cheng, X; Liu, X; Shangguan, D1
Carlucci, M; Kierzek, E; Kierzek, R; Olejnik, A; Turner, DH1
Dembska, A; Juskowiak, B1
D'Onofrio, J; Engels, JW; Knapp, DC1
Babu, BR; Hrdlicka, PJ; Maity, J; Wengel, J; Østergaard, ME1
Liao, D; Lu, P; Tang, D; Yang, X; Yu, C; Zhang, Y1
Hrdlicka, PJ; Østergaard, ME1
Jiang, Y; Jin, J; Li, J; Tan, W; Wang, K; Yang, R; Zheng, J1
Hrdlicka, PJ; Sau, SP1
Ding, P; Ingale, SA; Mei, H; Pujari, SS; Seela, F; Sirivolu, VR; Xiong, H1
Garo, F; Häner, R1
Astakhova, IK; Babu, BR; Samokhina, E; Wengel, J1
Astakhova, IK; Campbell, MA; Korshun, VA; Kumar, TS; Ustinov, AV; Wengel, J1
Edwards, SK; Jung, JW; Kool, ET1
Andersen, NK; Andersen, S; Anderson, BA; Guenther, DC; Hrdlicka, PJ; Karmakar, S; Kumar, P; Kumar, TS; Madsen, AS; Plavec, J; Podbevsek, P; Rathje, RL; Sau, SP; Wengel, J1
Apartsin, EK; Buyanova, MY; Filatov, AV; Novopashina, DS; Ryabchikova, EI; Venyaminova, AG; Zenkova, MA1
Karlsen, KK; Pedersen, EB; Perlíková, P; Wengel, J1
He, D; He, X; Qing, T; Qing, Z; Shi, H; Wang, K; Yang, X; Zou, Z1
Ejlersen, M; Langkjaer, N; Perlíková, P; Wengel, J1
Ingale, SA; Leonard, P; Seela, F; Yang, H1
Anderson, BA; Hrdlicka, PJ; Onley, JJ1
Brandl, F; Dick, B; Ensslen, P; Kutta, RJ; Sezi, S; Varghese, R; Wagenknecht, HA1
Matsueda, N; Okamura, H; Sasaki, S; Taniguchi, Y; Tomizaki, A1
Ehlers, M; Jiang, J; Maity, D; Schmuck, C; Wu, J1
Emehiser, R; Gibbons, BC; Guenther, DC; Horrocks, T; Hrdlicka, PJ; Karmakar, S1
Lee, MH; Leu, CC; Lin, CC; Lin, HY; Tseng, YF; Yang, CN1
Novopashina, DS; Semikolenova, OA; Venyaminova, AG1
Meschaninova, MI; Novopashina, DS; Semikolenova, OA; Silnikov, VN; Venyaminova, AG1
Fatthalla, MI; Géci, I; Heintz, M; Jørgensen, PT; Pedersen, EB1
Bai, L; Liu, J; Mu, Z; Qing, M; Zhou, J1

Reviews

1 review(s) available for pyrene and oligonucleotides

ArticleYear
Pyrene-functionalized oligonucleotides and locked nucleic acids (LNAs): tools for fundamental research, diagnostics, and nanotechnology.
    Chemical Society reviews, 2011, Volume: 40, Issue:12

    Topics: 3T3-L1 Cells; Animals; Base Sequence; DNA; Humans; Mice; Nanotechnology; Oligonucleotides; Pyrenes

2011

Other Studies

40 other study(ies) available for pyrene and oligonucleotides

ArticleYear
[Sensitized photomodification of DNA with binary systems. II. Spectral photosensitivity. One- and two quantum sensitization].
    Bioorganicheskaia khimiia, 1997, Volume: 23, Issue:7

    Topics: Autoradiography; Azides; Benzamides; DNA, Single-Stranded; Oligonucleotides; Photochemistry; Photons; Photosensitizing Agents; Pyrenes; Ultraviolet Rays

1997
5'-bis-pyrenylated oligonucleotides displaying excimer fluorescence provide sensitive probes of RNA sequence and structure.
    Nucleic acids research, 2001, Sep-01, Volume: 29, Issue:17

    Topics: ATP Binding Cassette Transporter, Subfamily B, Member 1; Base Sequence; DNA Probes; Fluorescence; Molecular Sequence Data; Nucleic Acid Conformation; Nucleic Acid Denaturation; Nucleic Acid Hybridization; Oligonucleotides; Pyrenes; RNA; RNA, Messenger; Spectrometry, Fluorescence; Temperature

2001
Electron injection into DNA: synthesis and spectroscopic properties of pyrenyl-modified oligonucleotides.
    Chemistry (Weinheim an der Bergstrasse, Germany), 2002, Nov-04, Volume: 8, Issue:21

    Topics: DNA; Electrons; Fluorescent Dyes; Oligonucleotides; Pyrenes; Spectrometry, Fluorescence; Thymine

2002
A pyrene-labeled G-quadruplex oligonucleotide as a fluorescent probe for potassium ion detection in biological applications.
    Angewandte Chemie (International ed. in English), 2005, Aug-12, Volume: 44, Issue:32

    Topics: Calcium; Circular Dichroism; Fluorescent Dyes; Magnesium; Oligonucleotides; Potassium; Pyrenes; Sensitivity and Specificity; Sodium; Staining and Labeling

2005
Synthesis and properties of fluorescent-labeled oligonucleotides containing amide-linked dinucleoside with pyrene.
    Nucleic acids symposium series (2004), 2004, Issue:48

    Topics: Amides; Dinucleoside Phosphates; Fluorescent Dyes; Oligonucleotides; Pyrenes; Uridine

2004
Synthesis and fluorescence properties of oligonucleotides containing pyrene-dimethylaniline chromophore.
    Nucleic acids symposium series (2004), 2004, Issue:48

    Topics: Aniline Compounds; Fluorescence; Oligonucleotides; Pyrenes; Uracil

2004
Self-duplex formation of an A(py)-substituted oligodeoxyadenylate and its unique fluorescence.
    Journal of the American Chemical Society, 2007, Apr-25, Volume: 129, Issue:16

    Topics: Deoxyadenine Nucleotides; Fluorescence; Fluorescent Dyes; Nucleic Acid Conformation; Oligonucleotides; Pyrenes; Spectrum Analysis

2007
The thermodynamics of 3'-terminal pyrene and guanosine for the design of isoenergetic 2'-O-methyl-RNA-LNA chimeric oligonucleotide probes of RNA structure.
    Biochemistry, 2008, Feb-05, Volume: 47, Issue:5

    Topics: Drug Stability; Guanosine; Oligonucleotide Array Sequence Analysis; Oligonucleotide Probes; Oligonucleotides; Pyrenes; RNA; Thermodynamics

2008
Modulation of pyrene fluorescence in DNA probes depends upon the nature of the conformationally restricted nucleotide.
    The Journal of organic chemistry, 2008, Apr-04, Volume: 73, Issue:7

    Topics: DNA Probes; Fluorescence; Nucleic Acid Conformation; Oligonucleotides; Pyrenes

2008
Nucleotide insertion and bypass synthesis of pyrene- and BODIPY-modified oligonucleotides by DNA polymerases.
    Chemical communications (Cambridge, England), 2008, Mar-28, Issue:12

    Topics: Base Sequence; Boron Compounds; Catalysis; DNA-Directed DNA Polymerase; Molecular Sequence Data; Molecular Structure; Oligonucleotides; Pyrenes; Spectrometry, Fluorescence; Uridine

2008
Interactions of sodium and potassium ions with oligonucleotides carrying human telomeric sequence and pyrene moieties at both termini.
    Bioorganic & medicinal chemistry, 2008, Nov-15, Volume: 16, Issue:22

    Topics: Base Sequence; Circular Dichroism; Fluorescence Resonance Energy Transfer; Fluorescent Dyes; G-Quadruplexes; Humans; Molecular Structure; Oligonucleotides; Potassium; Pyrenes; Sodium; Telomere; Thermodynamics

2008
A label-free fluorescence sensor for probing the interaction of oligonucleotides with target molecules.
    Analytica chimica acta, 2009, Feb-02, Volume: 633, Issue:1

    Topics: Binding Sites; Biosensing Techniques; Cetrimonium; Cetrimonium Compounds; Kinetics; Ligands; Oligonucleotides; Pyrenes; Sensitivity and Specificity; Spectrometry, Fluorescence; Surface-Active Agents

2009
Chemical synthesis of LNA-2-thiouridine and its influence on stability and selectivity of oligonucleotide binding to RNA.
    Biochemistry, 2009, Nov-24, Volume: 48, Issue:46

    Topics: Nucleic Acid Hybridization; Nucleotides; Oligonucleotides; Pyrenes; Ribose; RNA; RNA, Double-Stranded; Spectrophotometry, Ultraviolet; Thermodynamics; Thiouridine; Transition Temperature; Uridine

2009
The fluorescence properties and lifetime study of G-quadruplexes single- and double-labeled with pyrene.
    Journal of fluorescence, 2010, Volume: 20, Issue:5

    Topics: Aptamers, Nucleotide; Base Sequence; Cations; Fluorescence; G-Quadruplexes; Humans; Oligonucleotides; Potassium; Pyrenes; Spectrometry, Fluorescence; Telomere

2010
Fluorescent labeling of (oligo)nucleotides by a new fluoride cleavable linker capable of versatile attachment modes.
    Bioconjugate chemistry, 2010, Jun-16, Volume: 21, Issue:6

    Topics: Chromatography, High Pressure Liquid; Fluorescein; Fluorescent Dyes; Fluorides; Oligonucleotides; Pyrenes; Sequence Analysis, DNA; Staining and Labeling

2010
Novel insights into the use of Glowing LNA as nucleic acid detection probes--influence of labeling density and nucleobases.
    Bioorganic & medicinal chemistry letters, 2010, Dec-15, Volume: 20, Issue:24

    Topics: 5-Methylcytosine; Nucleic Acid Denaturation; Nucleic Acid Hybridization; Nucleic Acid Probes; Oligonucleotides; Pyrenes; Quantum Theory; Spectrometry, Fluorescence; Thymine; Transition Temperature

2010
Label-free detection of polynucleotide single-base mismatch via pyrene probe excimer emission.
    Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy, 2011, Volume: 78, Issue:2

    Topics: Base Pair Mismatch; Deoxyribonucleases; DNA, Complementary; Electrophoresis, Polyacrylamide Gel; Fluorescent Dyes; Nucleic Acid Denaturation; Oligonucleotides; Polynucleotides; Pyrenes; Spectrometry, Fluorescence; Staining and Labeling

2011
Design of aptamer-based sensing platform using triple-helix molecular switch.
    Analytical chemistry, 2011, Sep-01, Volume: 83, Issue:17

    Topics: Adenosine Triphosphate; Aptamers, Nucleotide; Arginine; Biosensing Techniques; Humans; Kinetics; Oligonucleotides; Protein Binding; Pyrenes; Spectrometry, Fluorescence; Thermodynamics; Thrombin

2011
C2'-pyrene-functionalized triazole-linked DNA: universal DNA/RNA hybridization probes.
    The Journal of organic chemistry, 2012, Jan-06, Volume: 77, Issue:1

    Topics: Base Pairing; DNA; DNA Probes; Nucleic Acid Conformation; Nucleic Acid Denaturation; Nucleic Acid Hybridization; Oligonucleotides; Pyrenes; RNA; RNA Probes; Spectrometry, Fluorescence; Triazoles

2012
7-Deazapurine and 8-aza-7-deazapurine nucleoside and oligonucleotide pyrene "click" conjugates: synthesis, nucleobase controlled fluorescence quenching, and duplex stability.
    The Journal of organic chemistry, 2012, Jan-06, Volume: 77, Issue:1

    Topics: Base Sequence; Click Chemistry; DNA; Fluorescence; Models, Molecular; Nucleosides; Oligonucleotides; Purines; Pyrenes; Spectrometry, Fluorescence

2012
A DNA-based light-harvesting antenna.
    Angewandte Chemie (International ed. in English), 2012, Jan-23, Volume: 51, Issue:4

    Topics: DNA; Fluorescence Resonance Energy Transfer; Fluorescent Dyes; Light; Oligonucleotides; Phenanthrenes; Pyrenes; Quantum Theory; Transition Temperature

2012
Novel (phenylethynyl)pyrene-LNA constructs for fluorescence SNP sensing in polymorphic nucleic acid targets.
    Chembiochem : a European journal of chemical biology, 2012, Jul-09, Volume: 13, Issue:10

    Topics: Base Pair Mismatch; Base Sequence; Fluorescent Dyes; HIV Protease; Humans; Models, Molecular; Mutation; Nucleic Acid Hybridization; Oligonucleotide Probes; Oligonucleotides; Polymorphism, Single Nucleotide; Pyrenes; RNA; Spectrometry, Fluorescence

2012
Branched DNA nanostructures efficiently stabilised and monitored by novel pyrene-perylene 2'-α-L-amino-LNA FRET pairs.
    Chemical communications (Cambridge, England), 2013, Jan-18, Volume: 49, Issue:5

    Topics: Click Chemistry; DNA; Fluorescence Resonance Energy Transfer; Microwaves; Nanostructures; Oligonucleotides; Pyrenes

2013
Selective fluorogenic chemosensors for distinct classes of nucleases.
    Chembiochem : a European journal of chemical biology, 2013, Mar-04, Volume: 14, Issue:4

    Topics: Biosensing Techniques; DNA; Endonucleases; Exonucleases; Fluorescent Dyes; HeLa Cells; Humans; Oligonucleotides; Pyrenes; Staphylococcus

2013
Identification and characterization of second-generation invader locked nucleic acids (LNAs) for mixed-sequence recognition of double-stranded DNA.
    The Journal of organic chemistry, 2013, Oct-04, Volume: 78, Issue:19

    Topics: DNA; Magnetic Resonance Spectroscopy; Models, Chemical; Nucleic Acid Conformation; Oligonucleotides; Pyrenes; Spectrometry, Fluorescence; Thymidine Monophosphate

2013
Novel multifunctional hybrids of single-walled carbon nanotubes with nucleic acids: synthesis and interactions with living cells.
    ACS applied materials & interfaces, 2014, Feb-12, Volume: 6, Issue:3

    Topics: Cell Death; Cell Survival; HeLa Cells; Humans; Nanotubes, Carbon; Nucleic Acids; Oligonucleotides; Pyrenes; Spectrometry, Fluorescence; Static Electricity

2014
Unlocked nucleic acids with a pyrene-modified uracil: synthesis, hybridization studies, fluorescent properties and i-motif stability.
    Chembiochem : a European journal of chemical biology, 2014, Jan-03, Volume: 15, Issue:1

    Topics: Base Sequence; DNA; Hydrogen-Ion Concentration; Nucleic Acid Conformation; Nucleic Acid Denaturation; Nucleic Acid Hybridization; Nucleic Acids; Oligonucleotides; Pyrenes; RNA; Spectrometry, Fluorescence; Transition Temperature; Uracil

2014
Ligation-rolling circle amplification combined with γ-cyclodextrin mediated stemless molecular beacon for sensitive and specific genotyping of single-nucleotide polymorphism.
    Talanta, 2014, Volume: 125

    Topics: beta-Thalassemia; DNA; DNA, Circular; Escherichia coli; Fluorescent Dyes; gamma-Cyclodextrins; Genotype; Humans; Nucleic Acid Amplification Techniques; Nucleic Acid Hybridization; Oligonucleotides; Point Mutation; Polymorphism, Single Nucleotide; Pyrenes

2014
Bis-pyrene-modified unlocked nucleic acids: synthesis, hybridization studies, and fluorescent properties.
    ChemMedChem, 2014, Volume: 9, Issue:9

    Topics: Base Pair Mismatch; Fluorescence; Models, Molecular; Nucleic Acid Denaturation; Nucleic Acids; Oligonucleotides; Pyrenes; Spectrometry, Fluorescence

2014
5-Nitroindole oligonucleotides with alkynyl side chains: universal base pairing, triple bond hydration and properties of pyrene "click" adducts.
    Organic & biomolecular chemistry, 2014, Nov-14, Volume: 12, Issue:42

    Topics: Base Pairing; Base Sequence; Click Chemistry; Deoxyribonucleosides; DNA; Indoles; Models, Molecular; Oligonucleotides; Pyrenes; Solid-Phase Synthesis Techniques

2014
Recognition of Double-Stranded DNA Using Energetically Activated Duplexes Modified with N2'-Pyrene-, Perylene-, or Coronene-Functionalized 2'-N-Methyl-2'-amino-DNA Monomers.
    The Journal of organic chemistry, 2015, Jun-05, Volume: 80, Issue:11

    Topics: DNA; Oligodeoxyribonucleotides; Oligonucleotides; Perylene; Polycyclic Compounds; Pyrenes; Spectrometry, Fluorescence; Thermodynamics

2015
DNA-Based Oligochromophores as Light-Harvesting Systems.
    Chemistry (Weinheim an der Bergstrasse, Germany), 2015, Jun-22, Volume: 21, Issue:26

    Topics: Base Sequence; DNA; Electron Transport; Energy Transfer; Fluorescence; Light; Oligonucleotides; Perylene; Pyrenes; Spectrophotometry, Ultraviolet

2015
Enhancement of TFO Triplex Formation by Conjugation with Pyrene via Click Chemistry.
    Chemical & pharmaceutical bulletin, 2015, Volume: 63, Issue:11

    Topics: Antineoplastic Agents; Base Sequence; Cell Line, Tumor; Cell Proliferation; Click Chemistry; DNA; Humans; Neoplasms; Oligonucleotides; Pyrenes

2015
A FRET-enabled molecular peptide beacon with a significant red shift for the ratiometric detection of nucleic acids.
    Chemical communications (Cambridge, England), 2016, May-04, Volume: 52, Issue:36

    Topics: A549 Cells; Animals; Binding Sites; Cattle; Cell Survival; DNA; Fluorescence Resonance Energy Transfer; Microscopy, Confocal; Naphthalenes; Oligonucleotides; Oligopeptides; Peptides; Pyrenes

2016
Synthesis and biophysical characterization of oligonucleotides modified with O2'-alkylated RNA monomers featuring substituted pyrene moieties.
    Organic & biomolecular chemistry, 2019, 01-16, Volume: 17, Issue:3

    Topics: Alkylation; Dose-Response Relationship, Drug; Molecular Structure; Oligonucleotides; Pyrenes; RNA; Structure-Activity Relationship; Thermodynamics

2019
Gold-decorated magnetic nanoparticles modified with hairpin-shaped DNA for fluorometric discrimination of single-base mismatch DNA.
    Mikrochimica acta, 2019, 01-09, Volume: 186, Issue:2

    Topics: Base Pair Mismatch; DNA, Single-Stranded; Fluorometry; Gold; Magnetite Nanoparticles; Nucleic Acid Hybridization; Oligonucleotides; Polymorphism, Single Nucleotide; Pyrenes; Sequence Analysis, DNA

2019
5'-Monopyrene and 5'-Bispyrene 2'-O-methyl RNA Probes for Detection of RNA Mismatches.
    Methods in molecular biology (Clifton, N.J.), 2020, Volume: 2063

    Topics: Base Pair Mismatch; Fluorescent Dyes; Nucleic Acid Hybridization; Oligonucleotide Probes; Oligonucleotides; Pyrenes; Pyridines; Ribose; RNA; RNA Probes; Spectrometry, Fluorescence

2020
Novel Convenient Approach to the Solid-Phase Synthesis of Oligonucleotide Conjugates.
    Molecules (Basel, Switzerland), 2019, Nov-22, Volume: 24, Issue:23

    Topics: Boron Compounds; Diamines; Molecular Structure; Oligonucleotides; Pargyline; Propylamines; Pyrenes; Solid-Phase Synthesis Techniques

2019
Hoogsteen triplexes stabilized through ethynyl-linked pyrene-indole synthesized by high-temperature Sonogashira coupling.
    Organic & biomolecular chemistry, 2022, 11-23, Volume: 20, Issue:45

    Topics: DNA; Indoles; Intercalating Agents; Nucleic Acid Conformation; Nucleic Acid Denaturation; Nucleic Acids; Oligonucleotides; Pyrenes; Temperature

2022
Aggregation-induced enhancement of pyrene-based metal-organic framework as a new electrochemiluminescence emitter for ultrasensitive detection of sulfadimethoxine.
    Food chemistry, 2024, Jan-30, Volume: 432

    Topics: Gold; Metal Nanoparticles; Metal-Organic Frameworks; Oligonucleotides; Pyrenes; Sulfadimethoxine

2024