phenylalanine has been researched along with 4-benzoylphenylalanine in 54 studies
| Timeframe | Studies, this research(%) | All Research% |
|---|---|---|
| pre-1990 | 0 (0.00) | 18.7374 |
| 1990's | 0 (0.00) | 18.2507 |
| 2000's | 12 (22.22) | 29.6817 |
| 2010's | 36 (66.67) | 24.3611 |
| 2020's | 6 (11.11) | 2.80 |
| Authors | Studies |
|---|---|
| Benedetti, E; Carrozzini, B; Cascarano, GL; Crisma, M; Didierjean, C; Improta, R; Saviano, M; Toniolo, C | 1 |
| Dong, M; Liu, G; Miller, LJ; Pinon, DI | 1 |
| Chin, JW; Farrell, IS; Hazen, JL; Mehl, RA; Toroney, R | 1 |
| Berger, H; Beyermann, M; Bienert, M; Escher, E; Holeran, B; Kraetke, O | 1 |
| Hayashi, A; Hino, N; Sakamoto, K; Yokoyama, S | 1 |
| Alfonta, L; Liu, W; Mack, AV; Schultz, PG | 1 |
| Bhagat, A; Huber, T; Kazmi, M; Köhrer, C; RajBhandary, UL; Sachdev, P; Sakmar, TP; Yan, ECY; Ye, S | 1 |
| Mierke, DF; Rosenblatt, M; Wittelsberger, A | 1 |
| Becker, JM; Huang, LY; Naider, F; Schultz, PG; Umanah, G | 1 |
| Boulais, PE; Cabana, J; Dulude, D; Escher, E; Heveker, N; Lavigne, P; Leduc, R | 1 |
| Garcia, V; Jaya, N; Vierling, E | 1 |
| Lancia, JK; Lee, LW; Majmudar, CY; Mapp, AK; Nwokoye, A; Wands, AM; Wang, L; Wang, Q | 1 |
| Guo, J; Robbins, S; Schultz, PG; Shen, W; Wang, F | 1 |
| Arsenault, J; Cabana, J; Escher, E; Fillion, D; Guillemette, G; Lavigne, P; Leduc, R | 1 |
| Castañeda, CA; Cropp, TA; Fushman, D; Liu, J; Wilkins, BJ | 1 |
| Hino, N; Mimasu, S; Sakamoto, K; Sato, A; Sato, S; Umehara, T; Yokoyama, S | 1 |
| Bourgault, S; Couvineau, A; Dejda, A; Doan, ND; Fournier, A; Létourneau, M; Vaudry, D; Vaudry, H | 1 |
| Das, S; Oliver, DB | 1 |
| Grunbeck, A; Huber, T; Sachdev, P; Sakmar, TP | 1 |
| Gage, FH; Louie, G; Miller, B; Noel, JP; Shen, B; Wang, L; Wang, W; Xiang, Z | 1 |
| Dugan, A; Fung, YH; Krishnamurthy, M; Lancia, JK; Majmudar, CY; Mapp, AK; Nwokoye, A | 1 |
| Becker, PB; Forné, I; Imhof, A; Ludwigsen, J; Mueller-Planitz, F | 1 |
| Hino, N; Iraha, F; Mukai, T; Sakamoto, K; Yanagisawa, T; Yokoyama, S | 1 |
| Mizutani, M; Mori, M; Mukaiyama, K; Narita, S; Okuda, S; Satou, R; Tokuda, H; Xiao, J | 1 |
| Ihling, CH; Kölbel, K; Müller, MQ; Schwarz, R; Sinz, A; Tänzler, D | 1 |
| Dugan, A; Joiner, C; Lancia, JK; Mapp, AK; Nwokoye, A; Pricer, R | 1 |
| Iyer, LK; Moorthy, BS; Topp, EM | 1 |
| Jarosch, E; Mehnert, M; Sommer, T | 1 |
| Rust, HL; Schultz, PG; Subramanian, V; Thompson, PR; West, GM; Young, DD | 1 |
| Bernstein, HD; Ieva, R; Pavlova, O | 1 |
| Dzeyk, K; Koehler, C; Köhn, M; Lemke, EA; Pavic, K; Rios, P | 1 |
| Frohberg, P; Ihling, CH; Jahn, O; Pettelkau, J; Sinz, A; van Werven, L | 1 |
| Aoba, T; Carrascosa, JL; Cuéllar, J; Franklin, S; Lai, CW; Makaju, A; Mathis, AD; Plimpton, RL; Prince, JT; Valpuesta, JM; Willardson, BM | 1 |
| Becker, JM; Naider, F | 1 |
| Dong, C; Dong, H; Gu, Y; Li, X; Wang, W | 1 |
| Berthold, N; Hoffmann, R; Knappe, D; Krizsan, A; Volke, D | 1 |
| Dugan, A; Katz, M; Mapp, AK; Pricer, R | 1 |
| Brofelth, M; Duroux, L; Edfeldt, LP; Ekstrand, AI; Kovačič, R; Larsen, KL; Nielsen, TT; Städe, LW; Wingren, C | 1 |
| Eldstrom, J; Fedida, D; Murray, CI; Westhoff, M | 1 |
| Fierke, CA; Haynes, SE; Lopez, JE; Majmudar, JD; Martin, BR | 1 |
| Akiyama, Y; Miyazaki, R; Mori, H; Myougo, N | 1 |
| Chen, HT; Khoo, SK; Lin, YC; Wu, CC | 1 |
| Bencsura, P; Fodor, E; Hunyadi-Gulyás, É; Huszár, K; Nyeste, A; Sangeetham, SB; Welker, E | 1 |
| Li, JC; Liu, T; Mehta, AP; Schultz, PG; Wang, Y | 1 |
| Braxton, CN; Cropp, TA; Fushman, D; Pawloski, W; Quartner, E | 1 |
| Akiyama, Y; Miyazaki, R; Mori, H | 1 |
| Chang, Z; Fu, X; Liu, Y; Shao, H; Shi, X; Song, X; Wang, Y; Zhang, M | 1 |
| Breen, ME; Joiner, CM; Mapp, AK | 1 |
| Ghisi, V; Klippenstein, V; Plested, AJR; Poshtiban, A; Poulsen, MH | 1 |
| Branigan, E; Fletcher, AJ; Hay, RT; Mathur, S; Virdee, S | 1 |
| Forstnerič, V; Hafner Bratkovič, I; Jerala, R; Kadunc, L; Svetličič, M | 1 |
| Aust, A; Brüninghoff, K; Dörner, W; Mootz, HD; Taupitz, KF; Wulff, S | 1 |
| Davidson, GA; Shen, S; Yang, K; Zhuang, Z | 1 |
| Baughman, HER; Chen, W; Gunther, TR; Komives, EA | 1 |
1 review(s) available for phenylalanine and 4-benzoylphenylalanine
| Article | Year |
|---|---|
A photo-cross-linking approach to monitor protein dynamics in living cells.
Topics: Animals; Benzophenones; CHO Cells; Codon; Cricetulus; Escherichia coli; Fluorescence Resonance Energy Transfer; HEK293 Cells; Humans; Mass Spectrometry; Methanocaldococcus; Phenylalanine; Photochemistry; Protein Interaction Mapping; Protein Structure, Secondary | 2020 |
53 other study(ies) available for phenylalanine and 4-benzoylphenylalanine
| Article | Year |
|---|---|
Benzophenone photophore flexibility and proximity: molecular and crystal-state structure of a Bpa-containing trichogin dodecapeptide analogue.
Topics: Anti-Bacterial Agents; Benzophenones; Crystallization; Crystallography, X-Ray; Glycopeptides; Hydrogen Bonding; Lipopeptides; Models, Molecular; Molecular Structure; Oligopeptides; Peptides; Phenylalanine; Photochemistry; Pliability | 2004 |
Differential docking of high-affinity peptide ligands to type A and B cholecystokinin receptors demonstrated by photoaffinity labeling.
Topics: Amino Acid Sequence; Animals; Benzophenones; Cell Membrane; CHO Cells; Cricetinae; Extracellular Space; Humans; Ligands; Molecular Sequence Data; Peptide Fragments; Peptide Mapping; Phenylalanine; Photoaffinity Labels; Protein Binding; Protein Structure, Tertiary; Receptor, Cholecystokinin A; Receptor, Cholecystokinin B | 2005 |
Photo-cross-linking interacting proteins with a genetically encoded benzophenone.
Topics: Amino Acyl-tRNA Synthetases; Benzophenones; Cross-Linking Reagents; Escherichia coli; Phenylalanine; Photoaffinity Labels; Photochemistry; Plasmids; Protein Interaction Mapping; Spectrophotometry, Ultraviolet | 2005 |
Photoaffinity cross-linking of the corticotropin-releasing factor receptor type 1 with photoreactive urocortin analogues.
Topics: Animals; Benzophenones; Binding Sites; Cell Line; Corticotropin-Releasing Hormone; Cross-Linking Reagents; Electrophoresis, Polyacrylamide Gel; Humans; Ligands; Peptide Fragments; Phenylalanine; Photochemistry; Protein Interaction Mapping; Rats; Receptors, Corticotropin-Releasing Hormone; Transfection; Urocortins | 2005 |
Site-specific incorporation of non-natural amino acids into proteins in mammalian cells with an expanded genetic code.
Topics: Amino Acid Substitution; Animals; Benzophenones; Gene Transfer Techniques; Genetic Code; Monoiodotyrosine; Mutagenesis, Site-Directed; Phenylalanine; Proteins; RNA, Transfer | 2006 |
Structural basis for the recognition of para-benzoyl-L-phenylalanine by evolved aminoacyl-tRNA synthetases.
Topics: Amino Acyl-tRNA Synthetases; Benzophenones; Binding Sites; Crystallography, X-Ray; Directed Molecular Evolution; Molecular Structure; Mutagenesis; Phenylalanine; Protein Binding | 2007 |
Site-specific incorporation of keto amino acids into functional G protein-coupled receptors using unnatural amino acid mutagenesis.
Topics: Amino Acids; Aminoacylation; Benzophenones; Cell Line; Escherichia coli; Geobacillus stearothermophilus; Humans; Luciferases; Mutagenesis, Site-Directed; Mutant Proteins; Mutation; Phenylalanine; Receptors, CCR5; Receptors, G-Protein-Coupled; Rhodopsin; RNA, Transfer, Tyr; Tyrosine-tRNA Ligase | 2008 |
Mapping ligand-receptor interfaces: approaching the resolution limit of benzophenone-based photoaffinity scanning.
Topics: Benzophenones; Ligands; Models, Chemical; Models, Molecular; Nuclear Magnetic Resonance, Biomolecular; Parathyroid Hormone; Phenylalanine; Photoaffinity Labels; Receptors, Parathyroid Hormone | 2008 |
Incorporation of the unnatural amino acid p-benzoyl-L-phenylalanine (Bpa) into a G protein-coupled receptor in its native context.
Topics: Benzophenones; Phenylalanine; Receptors, G-Protein-Coupled; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization | 2009 |
Photolabeling identifies transmembrane domain 4 of CXCR4 as a T140 binding site.
Topics: Amino Acid Sequence; Anti-HIV Agents; Benzophenones; Binding Sites; Binding, Competitive; Cell Line; DNA, Viral; HIV-1; Humans; Iodine Radioisotopes; Models, Molecular; Molecular Sequence Data; Oligopeptides; Phenylalanine; Photoaffinity Labels; Protein Structure, Tertiary; Proviruses; Receptors, CXCR4; Structure-Activity Relationship | 2009 |
Substrate binding site flexibility of the small heat shock protein molecular chaperones.
Topics: Amino Acid Sequence; Animals; Benzophenones; Binding Sites; Cross-Linking Reagents; Genetic Variation; Heat-Shock Proteins; Heat-Shock Proteins, Small; Humans; Models, Molecular; Molecular Chaperones; Molecular Sequence Data; Mutagenesis, Site-Directed; Phenylalanine; Pisum sativum; Plant Proteins; Protein Binding; Protein Interaction Domains and Motifs; Recombinant Proteins | 2009 |
Impact of nonnatural amino acid mutagenesis on the in vivo function and binding modes of a transcriptional activator.
Topics: Amino Acid Sequence; Benzophenones; DNA-Binding Proteins; Models, Molecular; Molecular Sequence Data; Phenylalanine; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Transcription Factors | 2009 |
Genetic incorporation of unnatural amino acids into proteins in Mycobacterium tuberculosis.
Topics: Animals; Azides; Base Sequence; Benzophenones; Boron Compounds; Cell Line; Codon, Nonsense; Genetic Engineering; Green Fluorescent Proteins; Macrophages; Methanococcus; Microscopy, Fluorescence; Molecular Sequence Data; Mutation; Mycobacterium tuberculosis; Phenylalanine; Plasmids; RNA, Transfer, Tyr; Transformation, Genetic; Tyrosine-tRNA Ligase | 2010 |
Temperature dependent photolabeling of the human angiotensin II type 1 receptor reveals insights into its conformational landscape and its activation mechanism.
Topics: Angiotensin II; Benzophenones; Binding Sites; Cyanogen Bromide; Humans; Ligands; Methionine; Molecular Conformation; Phenylalanine; Protein Binding; Receptor, Angiotensin, Type 1; Temperature | 2010 |
Condensed E. coli cultures for highly efficient production of proteins containing unnatural amino acids.
Topics: Amino Acids; Amino Acyl-tRNA Synthetases; Benzophenones; Escherichia coli; Phenylalanine; Recombinant Proteins; Ubiquitin | 2010 |
Crystallographic study of a site-specifically cross-linked protein complex with a genetically incorporated photoreactive amino acid.
Topics: Amino Acids; Animals; Benzophenones; Cross-Linking Reagents; Crystallography, X-Ray; Gene Expression; Humans; Liver; Mice; Models, Molecular; Phenylalanine; Photochemical Processes; Plasmids; Proteasome Endopeptidase Complex; Protein Engineering; Protein Structure, Tertiary; Transcription Factors | 2011 |
Identification by photoaffinity labeling of the extracellular N-terminal domain of PAC1 receptor as the major binding site for PACAP.
Topics: Amino Acid Sequence; Animals; Benzophenones; Binding Sites; CHO Cells; Cricetinae; Cricetulus; Glycosylation; Humans; Iodine Isotopes; Molecular Sequence Data; Phenylalanine; Photoaffinity Labels; Pituitary Adenylate Cyclase-Activating Polypeptide; Protein Binding; Protein Structure, Secondary; Protein Structure, Tertiary; Receptors, Pituitary Adenylate Cyclase-Activating Polypeptide, Type I | 2011 |
Mapping of the SecA·SecY and SecA·SecG interfaces by site-directed in vivo photocross-linking.
Topics: Benzophenones; Biological Transport; Membrane Transport Proteins; Methanococcus; Phenylalanine; Photochemistry; Protein Binding; Protein Transport; Thermotoga maritima | 2011 |
Mapping the ligand-binding site on a G protein-coupled receptor (GPCR) using genetically encoded photocrosslinkers.
Topics: Azides; Benzophenones; Binding Sites; Cross-Linking Reagents; Fluoresceins; Fluorescent Dyes; HEK293 Cells; HIV-1; Humans; Ligands; Models, Molecular; Mutation; Oligopeptides; Phenylalanine; Protein Binding; Receptors, CXCR4; Ultraviolet Rays | 2011 |
Genetically encoding unnatural amino acids in neural stem cells and optically reporting voltage-sensitive domain changes in differentiated neurons.
Topics: Alanine; Amino Acyl-tRNA Synthetases; Animals; Benzophenones; Cell Differentiation; Cell Line; Dansyl Compounds; Fluorescence; Genetic Engineering; Genetic Vectors; Humans; Lentivirus; Membrane Potentials; Neural Stem Cells; Neurons; Patch-Clamp Techniques; Phenylalanine; Phosphoric Monoester Hydrolases; Protein Conformation; Protein Structure, Tertiary; Rats; Time-Lapse Imaging; Tyrosine-tRNA Ligase | 2011 |
Caught in the act: covalent cross-linking captures activator-coactivator interactions in vivo.
Topics: Adenosine Triphosphatases; Benzophenones; Cross-Linking Reagents; Herpes Simplex Virus Protein Vmw65; Phenylalanine; Protein Interaction Maps; Saccharomyces cerevisiae Proteins; Transcription Factors; Transcriptional Activation | 2011 |
Probing the conformation of the ISWI ATPase domain with genetically encoded photoreactive crosslinkers and mass spectrometry.
Topics: Adenosine Triphosphatases; Benzophenones; Chromatography, Liquid; Drosophila Proteins; Escherichia coli; Models, Molecular; Molecular Conformation; Mutation; Phenylalanine; Protein Structure, Tertiary; Tandem Mass Spectrometry; Transcription Factors; Ultraviolet Rays | 2012 |
Wide-range protein photo-crosslinking achieved by a genetically encoded N(ε)-(benzyloxycarbonyl)lysine derivative with a diazirinyl moiety.
Topics: Adaptor Proteins, Signal Transducing; Animals; Azirines; Benzophenones; CHO Cells; Cricetinae; Cross-Linking Reagents; HEK293 Cells; Humans; Lysine; Phenylalanine; Protein Conformation | 2012 |
Functional differentiation of structurally similar membrane subunits of the ABC transporter LolCDE complex.
Topics: Adenosine Triphosphate; ATP-Binding Cassette Transporters; Bacterial Outer Membrane Proteins; Benzophenones; Blotting, Western; Chromatography, Affinity; Codon, Terminator; Cross-Linking Reagents; Electrophoresis, Polyacrylamide Gel; Escherichia coli Proteins; Hydrophobic and Hydrophilic Interactions; Ligands; Multiprotein Complexes; Mutagenesis, Site-Directed; Mutant Proteins; Phenylalanine; Photochemical Processes; Protein Interaction Domains and Motifs; Protein Subunits; Recombinant Proteins | 2013 |
Monitoring conformational changes in peroxisome proliferator-activated receptor α by a genetically encoded photoamino acid, cross-linking, and mass spectrometry.
Topics: Benzophenones; Binding Sites; Butyrates; Cross-Linking Reagents; Genetic Variation; Ligands; Models, Molecular; Oxazoles; Phenylalanine; Phenylurea Compounds; PPAR alpha; Protein Binding; Protein Conformation; Protein Multimerization; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Tyrosine; Ultraviolet Rays | 2013 |
Sequence context and crosslinking mechanism affect the efficiency of in vivo capture of a protein-protein interaction.
Topics: Amino Acid Sequence; Amino Acids; Azides; Bacterial Proteins; Benzophenones; Cross-Linking Reagents; DNA-Binding Proteins; Methionine; Mutant Proteins; Phenylalanine; Protein Binding; Saccharomyces cerevisiae Proteins; Serine Endopeptidases; Transcription Factors | 2014 |
Photolytic labeling to probe molecular interactions in lyophilized powders.
Topics: Amino Acid Sequence; Amino Acids; Apoproteins; Benzophenones; Chromatography, High Pressure Liquid; Freeze Drying; Guanidine; Mass Spectrometry; Myoglobin; Peptides; Phenylalanine; Photolysis; Powders; Sucrose | 2013 |
Der1 promotes movement of misfolded proteins through the endoplasmic reticulum membrane.
Topics: Benzophenones; Conserved Sequence; Cross-Linking Reagents; Endoplasmic Reticulum; Endoplasmic Reticulum-Associated Degradation; Intracellular Membranes; Membrane Proteins; Models, Biological; Mutation; Phenylalanine; Protein Folding; Protein Multimerization; Protein Structure, Tertiary; Protein Transport; Saccharomyces cerevisiae Proteins; Substrate Specificity | 2014 |
Using unnatural amino acid mutagenesis to probe the regulation of PRMT1.
Topics: Amino Acid Substitution; Benzophenones; Cross-Linking Reagents; Histones; Humans; Immunoprecipitation; K562 Cells; Methylation; Mutagenesis, Site-Directed; Phenylalanine; Phosphorylation; Protein Processing, Post-Translational; Protein-Arginine N-Methyltransferases; Repressor Proteins; Substrate Specificity; Tyrosine | 2014 |
Monitoring the assembly of a secreted bacterial virulence factor using site-specific crosslinking.
Topics: Amino Acyl-tRNA Synthetases; Benzophenones; Cross-Linking Reagents; Escherichia coli; Escherichia coli Proteins; Methanocaldococcus; Mutation; Phenylalanine; Protein Interaction Mapping; Proteins; RNA, Transfer; Serine Endopeptidases | 2013 |
Unnatural amino acid mutagenesis reveals dimerization as a negative regulatory mechanism of VHR's phosphatase activity.
Topics: Animals; Benzophenones; Catalytic Domain; Chlorocebus aethiops; COS Cells; Cross-Linking Reagents; Dual Specificity Phosphatase 3; Enzyme Activation; Humans; Models, Molecular; Mutagenesis; Mutation; Phenylalanine; Photochemical Processes; Protein Multimerization | 2014 |
Reliable identification of cross-linked products in protein interaction studies by 13C-labeled p-benzoylphenylalanine.
Topics: Amino Acid Sequence; Animals; Benzophenones; Calmodulin; Carbon Isotopes; Cattle; Cross-Linking Reagents; Guanylate Cyclase-Activating Proteins; Isotope Labeling; Models, Molecular; Molecular Sequence Data; Peptides; Phenylalanine; Protein Interaction Mapping; Proteins; Spectrometry, Mass, Electrospray Ionization | 2014 |
Structures of the Gβ-CCT and PhLP1-Gβ-CCT complexes reveal a mechanism for G-protein β-subunit folding and Gβγ dimer assembly.
Topics: Amino Acids; Animals; Benzophenones; Carrier Proteins; Chaperonin Containing TCP-1; Cross-Linking Reagents; Cryoelectron Microscopy; GTP-Binding Protein beta Subunits; GTP-Binding Protein gamma Subunits; Humans; Mass Spectrometry; Models, Molecular; Nerve Tissue Proteins; Phenylalanine; Protein Multimerization; Protein Structure, Secondary | 2015 |
Cross-linking strategies to study peptide ligand-receptor interactions.
Topics: Amino Acid Sequence; Animals; Benzophenones; Cross-Linking Reagents; Humans; Ligands; Mass Spectrometry; Molecular Sequence Data; Peptides; Phenylalanine; Receptors, G-Protein-Coupled; Solid-Phase Synthesis Techniques; Ultraviolet Rays | 2015 |
Trapped lipopolysaccharide and LptD intermediates reveal lipopolysaccharide translocation steps across the Escherichia coli outer membrane.
Topics: Bacterial Outer Membrane Proteins; Benzophenones; Biological Transport; Cell Membrane; Escherichia coli; Escherichia coli Proteins; Hydrophobic and Hydrophilic Interactions; Lipopolysaccharides; O Antigens; Periplasm; Phenylalanine; Protein Binding; Protein Structure, Secondary; Ultraviolet Rays | 2015 |
Identification of Api88 Binding Partners in Escherichia coli Using a Photoaffinity-Cross-Link Strategy and Label-Free Quantification.
Topics: Amino Acid Sequence; Amino Acid Substitution; Animals; Antimicrobial Cationic Peptides; Benzophenones; Blotting, Western; Chromatography, Affinity; Chromatography, High Pressure Liquid; Cross-Linking Reagents; Escherichia coli; Escherichia coli Proteins; Insect Proteins; Microbial Sensitivity Tests; Molecular Sequence Data; Phenylalanine; Protein Binding; Protein Interaction Mapping; Protein Interaction Maps; Proteomics; Spectrometry, Mass, Electrospray Ionization; Tandem Mass Spectrometry; Tyrosine; Ultraviolet Rays | 2015 |
TRIC: Capturing the direct cellular targets of promoter-bound transcriptional activators.
Topics: Benzophenones; Chromatin Immunoprecipitation; Cross-Linking Reagents; Galactokinase; Herpes Simplex Virus Protein Vmw65; Phenylalanine; Photochemical Processes; Promoter Regions, Genetic; Protein Binding; Protein Multimerization; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Signal Transduction; TATA-Box Binding Protein; Trans-Activators; Transcriptional Activation | 2016 |
Site-specific photocoupling of pBpa mutated scFv antibodies for use in affinity proteomics.
Topics: Antibody Affinity; Benzophenones; beta-Cyclodextrins; Humans; Mutation; Phenylalanine; Protein Engineering; Proteomics; Recombinant Fusion Proteins; Single-Chain Antibodies | 2017 |
Photo-Cross-Linking of I
Topics: Amino Acids; Animals; Benzophenones; Cell Line; Humans; Membrane Potentials; Mice; Mutation; Patch-Clamp Techniques; Phenylalanine; Photochemical Processes; Potassium Channels, Voltage-Gated; Protein Conformation; Protein Domains; Ultraviolet Rays | 2017 |
HDAC8 Substrates Identified by Genetically Encoded Active Site Photocrosslinking.
Topics: Acetylation; Benzophenones; Catalytic Domain; Cell Extracts; Cross-Linking Reagents; Histone Deacetylases; Humans; Lysine; Phenylalanine; Photochemical Processes; Proteomics; Repressor Proteins; Reproducibility of Results; Substrate Specificity | 2017 |
A photo-cross-linking approach to monitor folding and assembly of newly synthesized proteins in a living cell.
Topics: Amino Acids; Benzophenones; Escherichia coli; Escherichia coli Proteins; Phenylalanine; Protein Binding; Protein Interaction Mapping; Proteins | 2018 |
The TFIIE-related Rpc82 subunit of RNA polymerase III interacts with the TFIIB-related transcription factor Brf1 and the polymerase cleft for transcription initiation.
Topics: Amino Acid Sequence; Base Sequence; Benzophenones; Binding Sites; Cloning, Molecular; Cross-Linking Reagents; DNA; DNA, Fungal; Gene Expression Regulation, Fungal; Hydroxyl Radical; Models, Molecular; Phenylalanine; Plasmids; Protein Binding; Protein Conformation, alpha-Helical; Protein Conformation, beta-Strand; Protein Interaction Domains and Motifs; RNA Polymerase III; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Sequence Alignment; Sequence Homology, Amino Acid; Transcription Factor TFIIIB; Transcription Initiation, Genetic | 2018 |
Interrogating the Dimerization Interface of the Prion Protein Via Site-Specific Mutations to p-Benzoyl-L-Phenylalanine.
Topics: Animals; Benzophenones; Cross-Linking Reagents; Mice; Models, Molecular; Mutation; Phenylalanine; Prion Proteins; Protein Conformation; Protein Folding; Protein Multimerization; Thermodynamics | 2018 |
Enhancing Protein Stability with Genetically Encoded Noncanonical Amino Acids.
Topics: Benzophenones; Escherichia coli; Escherichia coli Proteins; Homoserine O-Succinyltransferase; Mutation; Phenylalanine; Protein Domains; Protein Engineering; Protein Stability; Temperature | 2018 |
Ubiquitin Chains Bearing Genetically Encoded Photo-Cross-Linkers Enable Efficient Covalent Capture of (Poly)ubiquitin-Binding Domains.
Topics: Benzophenones; Binding Sites; Carrier Proteins; Cross-Linking Reagents; DNA-Binding Proteins; Histone Chaperones; Mutation; Nuclear Proteins; Phenylalanine; Polyubiquitin; Proteasome Endopeptidase Complex; Protein Domains; RNA, Transfer, Tyr; Saccharomyces cerevisiae Proteins; Ubiquitin; Ubiquitin-Activating Enzymes | 2019 |
Subunit interactions as mediated by "non-interface" residues in living cells for multiple homo-oligomeric proteins.
Topics: Benzophenones; Cross-Linking Reagents; Diazomethane; Escherichia coli; Escherichia coli Proteins; Heat-Shock Proteins; Lysine; Models, Molecular; Molecular Dynamics Simulation; Mutation; Periplasmic Proteins; Phenylalanine; Protein Interaction Domains and Motifs; Protein Multimerization; Protein Structure, Quaternary; Protein Subunits; Serine Endopeptidases | 2019 |
Electron-deficient p-benzoyl-l-phenylalanine derivatives increase covalent chemical capture yields for protein-protein interactions.
Topics: Benzophenones; Cross-Linking Reagents; Electrons; Molecular Structure; Phenylalanine; Protein Binding; Saccharomyces cerevisiae Proteins | 2019 |
Gating modules of the AMPA receptor pore domain revealed by unnatural amino acid mutagenesis.
Topics: Amino Acids; Azides; Benzophenones; Humans; Mutagenesis; Phenylalanine; Protein Domains; Receptor Cross-Talk; Receptors, AMPA; Receptors, Glutamate; Structure-Activity Relationship; Ultraviolet Rays | 2019 |
Photocrosslinking Activity-Based Probes for Ubiquitin RING E3 Ligases.
Topics: Benzophenones; Cross-Linking Reagents; Humans; Models, Molecular; Molecular Conformation; Phenylalanine; Photochemical Processes; Ubiquitin-Conjugating Enzymes; Ubiquitin-Protein Ligases | 2020 |
Increased gene translation stringency in mammalian cells by nonsense suppression at multiple permissive sites with a single noncanonical amino acid.
Topics: Amino Acyl-tRNA Synthetases; Benzophenones; Codon, Nonsense; HEK293 Cells; Humans; Phenylalanine; Protein Biosynthesis; RNA, Transfer | 2020 |
Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.
Topics: Amino Acid Sequence; Benzophenones; Carrier Proteins; Cross-Linking Reagents; HeLa Cells; Humans; Phenylalanine; Protein Binding; Proteomics; Small Ubiquitin-Related Modifier Proteins; Ultraviolet Rays | 2020 |
Photo-activatable Ub-PCNA probes reveal new structural features of the Saccharomyces cerevisiae Polη/PCNA complex.
Topics: Benzophenones; DNA; DNA Replication; DNA-Binding Proteins; DNA-Directed DNA Polymerase; Macromolecular Substances; Mutation; Phenylalanine; Proliferating Cell Nuclear Antigen; Protein Binding; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Ubiquitin | 2021 |
Site-specific incorporation of biophysical probes into NF-ĸB with non-canonical amino acids.
Topics: Amino Acids; NF-kappa B; Phenylalanine | 2023 |