Page last updated: 2024-09-02

nopaline and arginine

nopaline has been researched along with arginine in 103 studies

Compound Research Comparison

Studies (nopaline)	Trials (nopaline)	Recent Studies (post-2010) (nopaline)	Studies (arginine)	Trials (arginine)	Recent Studies (post-2010) (arginine)
106	0	12	46,388	1,688	11,176

Protein Interaction Comparison

Protein	Taxonomy	nopaline (IC50)	arginine (IC50)
Cationic amino acid transporter 3	Homo sapiens (human)		283

Research

Studies (103)

Timeframe	Studies, this research(%)	All Research%
pre-1990	44 (42.72)	18.7374
1990's	35 (33.98)	18.2507
2000's	12 (11.65)	29.6817
2010's	11 (10.68)	24.3611
2020's	1 (0.97)	2.80

Authors

Authors	Studies
Otten, LA; Schilperoort, RA	1
Gordon, MP; Montoya, AL; Moore, LW; Nester, EW	1
Chilton, MD; Gordon, MP; Montoya, AL; Nester, EW; Sciaky, D	1
Chilton, WS; Jensen, RE; Yasuda, K; Zdybak, WT	1
Donkersloot, JA; Thompson, J	1
Gelvin, SB; Li, XQ; Liu, CN	1
Hodges, L; Ream, W; Shurvinton, CE	1
Kagaya, M; Sano, H; Wabiko, H	1
Schröder, J; von Lintig, J; Zanker, H	1
Burgner, JW; Chilton, WS; Gelvin, SB; Krishnan, M	1
Kerr, A; Zhang, LH	1
den Dulk-Ras, A; Hooykaas, PJ; Maroney, MJ; Melchers, LS; Schilperoort, RA; Thompson, DV; van Vuuren, HA	1
Clare, BG; Jones, DA; Kerr, A	1
Kado, CI; Morel, P; Shirasu, K	1
Kado, CI; Lin, TS; Steck, TR	1
De Vos, G; Kuldau, GA; McCaffrey, G; Owen, J; Zambryski, P	1
Sans, N; Schindler, U; Schröder, J	2
Gelvin, SB; Gould, JH; Krishnan, M; Smith, RH; Veluthambi, K	1
Kado, CI; Morel, P; Powell, BS; Rogowsky, PM	1
Farrand, SK; Hayman, GT	1
Kado, CI; Tait, RC	1
Close, TJ; Kado, CI; Steck, TR	1
Sans, N; Schröder, G; Schröder, J	1
Ashby, AM; Brown, A; Loake, GJ; Royal, C; Shaw, CH	1
Fraley, RT; Horsch, RB; Klee, HJ; Nester, EW; Rogers, SG; Stachel, S; Winans, SC	1
Bísková, R; Hrouda, M; Ondrej, M; Vlasák, J	1
Hirooka, T; Kado, CI; Rogowsky, PM	1
Christou, P; Platt, SG; Yang, NS	1
Dessaux, Y; Farrand, SK	1
Nester, EW; Yanofsky, MF	1
Chilton, MD; Fraley, RT; Helmer, GL; Hood, EE	1
Beljanski, M; Le Goff, L	1
Firmin, JL; Stewart, IM; Wilson, KE	1
Beiderbeck, R; Lippincott, BB; Lippincott, JA	1
den Dulk-Ras, H; Hofker, M; Hooykaas, PJ; Schilperoort, RA	1
De Vos, G; De Vos, R; De Wilde, M; Depicker, A; Schell, J; Van Montagu, M	1
De Block, M; Depicker, A; Dhaese, P; Engler, G; Genetello, C; Holsters, M; Inzé, D; Silva, B; Van Vliet, F; Villarroel, R	1
De Beuckeleer, M; Depicker, A; Engler, G; Hernalsteens, JP; Holsters, M; Lemmers, M; Schell, J; Van Montagu, M; Willmitzer, L; Zambryski, P	1
Nester, EW; White, FF	1
Depicker, A; Engler, G; Maenhaut, R; Schell, J; Van Montagu, M; Villarroel, R	1
Dhaese, P; Schell, J; Schmalenbach, W; Schreier, PH; Van Montagu, M; Willmitzer, L	1
Byrne, MC; Chilton, MD; Lahners, K	1
di Mauro, E; Risuelo, G	1
Ikeda, M; Ito, N	1
Furukawa, K; Hasunuma, K; Hatanaka, S; Hayashi, T	1
Kado, CI; Schardl, CL	1
Caplan, A; Inzé, D; Joos, H; Schell, J; Sormann, M; Van Montagu, M	1
Hall, LM; Schrimsher, JL; Taylor, KB	1
Kosuge, T; Nester, EW	1
De Greve, H; Deblaere, R; Hernalsteens, JP; Leemans, J; Maes, M; Schell, J; Shaw, C; Van Montagu, M	1
Prakash, RK; Schilperoort, RA	1
Morris, RO; Regier, DA	1
Bevan, MW; Chilton, MD	1
Molendijk, L; Ooms, G; Schilperoort, RA; Wullems, GJ	1
den Dulk-Ras, H; Hooykaas, PJ; Ooms, G; Schilperoort, RA	1
Boulton, MI; Gordon, MP; Hawes, M; Jin, S; Nester, EW; Pan, SQ	1
Chee, PP; Slightom, JL	1
Bélanger, C; Dion, P; Mohammadi, M; Xu, D	1
Krul, WR; Lacorte, C; Mansur, E	1
Marincs, F; White, DW	3
De Ruffray, P; Otten, L	1
Bouzar, H; Chilton, WS; Dessaux, Y; Hodge, NC; Jones, JB; Nesme, X; Petit, A; Vaudequin, V	1
Nesme, X; Ponsonnet, C	1
Kreusch, D; Langridge, P; Langridge, U; Lurz, G; Schröder, J; Zanker, H	1
Kreusch, D; Schröder, J; von Lintig, J	2
Schrell, A; Schröder, J	1
Hooykaas, PJ; Regensburg-Tuïnk, AJ	1
Liu, H; Song, J; Zhang, Y; Zhao, B	1
Cook, DM; Farrand, SK; Hwang, I	1
Cook, DM; Farrand, SK; Li, PL; Padden, S; Ruchaud, F	1
An, G; Kim, Y	1
Farrand, SK; Kim, H	1
Hattori, Y; Kato, A; Ohta, N; Suzuki, K; Uraji, M; Yoshida, K	1
Bettachini, A; Dessaux, Y; Héricher, D; Keller, H; Nesme, X; Pionnat, S; Poncet, C	1
Angerer, C; Baron, C; Domke, N; Schmidt-Eisenlohr, H; Wanner, G; Zambryski, PC	1
Farrand, SK; Li, PL	1
Dessaux, Y; Mansouri, H; Oger, P	1
Hardayani, NS; Kataoka, M; Maeda, Y; Moriguchi, K; Satou, M; Tanaka, N; Yoshida, K	1
Balaji, V; Krishnamohan, A; Veluthambi, K	1
Hattori, Y; Iwata, K; Katoh, A; Ohta, N; Suzuki, K; Uraji, M; Yoshida, K	1
Farrand, SK; Oger, P	1
Dessaux, Y; Mansouri, H; Oger, P; Petit, A	1
Guo, ZG; Lei, HT; Qi, JJ; Song, JJ; Yang, JS; Zhang, YL	1
Dessaux, Y; Mansouri, H; Nesme, X; Oger, PM	1
Alvarez-Martinez, MT; Arpagaus, M; Boigegrain, RA; Fedon, Y; Machold, J; Rittig, M; Rouot, B; Salhi, I; Weise, C	1
Czirjak, T; Dandekar, T; Deeken, R; Efetova, M; Engelmann, JC; Hedrich, R; Kaiser, WM; Krischke, M; Mueller, MJ; Müller, T; Palme, K; Tietz, O	1
Aguilar, J; Hackworth, CA; Ward, D; Zambryski, P; Zupan, J	1
Chew, TH; Gan, HM; Hudson, AO; Savka, MA	1
Han, ZF; Hunter, DM; Sibbald, S; Tian, L; Zhang, JS	1
Dessaux, Y; Faure, D; Lang, J; Mondy, S; Moréra, S; Planamente, S	1
Aumont-Nicaise, M; Blin, P; Dessaux, Y; El Sahili, A; Faure, D; Lang, J; Moréra, S; Planamente, S; Vigouroux, A	1
Fukumori, F; Sueda, R; Watanabe, S; Watanabe, Y	1
Citovsky, V; Lacroix, B	1
Aumont-Nicaise, M; Dessaux, Y; El Sahili, A; Faure, D; Kwasiborski, A; Lang, J; Moréra, S; Shykoff, JA; Vigouroux, A	1
Aumont-Nicaise, M; Dessaux, Y; El Sahili, A; Faure, D; Lang, J; Moréra, S; Vigouroux, A	1
Ahmar, M; Dessaux, Y; Faure, D; González-Mula, A; Grandclément, C; Lang, J; Naquin, D; Queneau, Y; Soulère, L	1
Kuzmanović, N; Puławska, J	1
Hooykaas, PJJ; Shao, S; van Heusden, GPH	1
Bellvert, F; Chapulliot, D; Dessaux, Y; Gaillard, V; Kerzaon, I; Lavire, C; Le, TN; Nesme, X; Padilla, R; Vial, L	1

Reviews

2 review(s) available for nopaline and arginine

Article	Year
Biosynthesis and distribution of N-carboxyalkyl amino acids (opines) in bacteria. Research in microbiology, 1992, Volume: 143, Issue:2 Topics: Amino Acids; Arginine; Arthrobacter; Bacteria; In Vitro Techniques; Lactococcus lactis; Rhizobium	1992
Plasmids specifying plant hyperplasias. Annual review of microbiology, 1981, Volume: 35 Topics: Arginine; Bacteriophages; Base Sequence; Genes, Bacterial; Indoleacetic Acids; Oxazines; Plant Tumors; Plasmids; Pseudomonas; Recombination, Genetic; Rhizobium; Transcription, Genetic	1981

Other Studies

101 other study(ies) available for nopaline and arginine

Article	Year
A rapid micro scale method for the detection of lysopine and nopaline dehydrogenase activities. Biochimica et biophysica acta, 1978, Dec-08, Volume: 527, Issue:2 Topics: Arginine; D-Amino-Acid Oxidase; Glutarates; Lysine; Microchemistry; Oxidoreductases Acting on CH-NH Group Donors; Plant Tumors; Rhizobium	1978
Multiple genes coding for octopine-degrading enzymes in Agrobacterium. Journal of bacteriology, 1978, Volume: 136, Issue:3 Topics: Arginine; Chromosomes, Bacterial; Genes; Glutarates; Mutation; Plasmids; Rhizobium	1978
Octopine and nopaline metabolism in Agrobacterium tumefaciens and crown gall tumor cells: role of plasmid genes. Journal of bacteriology, 1977, Volume: 129, Issue:1 Topics: Arginine; Conjugation, Genetic; Extrachromosomal Inheritance; Genes; Glutarates; Oxidoreductases Acting on CH-NH Group Donors; Plant Tumors; Plasmids; Rhizobium; Transformation, Genetic	1977
A useful synthesis of nopaline, a crown gall tumor metabolite. Biochemical and biophysical research communications, 1977, Apr-25, Volume: 75, Issue:4 Topics: Arginine; Glutarates; Magnetic Resonance Spectroscopy; Plant Tumors	1977
Multiple copies of virG enhance the transient transformation of celery, carrot and rice tissues by Agrobacterium tumefaciens. Plant molecular biology, 1992, Volume: 20, Issue:6 Topics: Agrobacterium tumefaciens; Arginine; Cells, Cultured; Culture Techniques; Genes, Bacterial; Genetic Vectors; Glucuronidase; Oryza; Oxazines; Plants, Genetically Modified; Plasmids; Transformation, Genetic; Vegetables	1992
A nuclear localization signal and the C-terminal omega sequence in the Agrobacterium tumefaciens VirD2 endonuclease are important for tumor formation. Proceedings of the National Academy of Sciences of the United States of America, 1992, Dec-15, Volume: 89, Issue:24 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Arginine; Cell Compartmentation; Cell Nucleus; DNA Mutational Analysis; Molecular Sequence Data; Mutagenesis, Site-Directed; Plant Diseases; Plasmids; Sequence Alignment; Sequence Deletion	1992
Polymorphism of Nopaline-type T-DNAs from Agrobacterium tumefaciens. Plasmid, 1991, Volume: 25, Issue:1 Topics: Arginine; Base Sequence; Blotting, Southern; Cloning, Molecular; DNA Transposable Elements; DNA, Bacterial; Plant Tumors; Plants; Plasmids; Polymorphism, Genetic; Polymorphism, Restriction Fragment Length; Rhizobium	1991
Opine transport genes in the octopine (occ) and nopaline (noc) catabolic regions in Ti plasmids of Agrobacterium tumefaciens. Journal of bacteriology, 1992, Volume: 174, Issue:3 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Amino Acids; Arginine; Base Sequence; Biological Transport, Active; Carrier Proteins; Chromosome Mapping; DNA Mutational Analysis; Molecular Sequence Data; Nucleic Acid Conformation; Plasmids; Reading Frames; Regulatory Sequences, Nucleic Acid; Sequence Homology, Nucleic Acid; Transcription, Genetic	1992
Transport of nonmetabolizable opines by Agrobacterium tumefaciens. Journal of bacteriology, 1991, Volume: 173, Issue:2 Topics: Arginine; Biological Transport; Carbon Radioisotopes; Kinetics; Radioisotope Dilution Technique; Rhizobium	1991
A diffusible compound can enhance conjugal transfer of the Ti plasmid in Agrobacterium tumefaciens. Journal of bacteriology, 1991, Volume: 173, Issue:6 Topics: Arginine; Conjugation, Genetic; Diffusion; Imino Acids; Plasmids; Rhizobium; Temperature	1991
Octopine and nopaline strains of Agrobacterium tumefaciens differ in virulence; molecular characterization of the virF locus. Plant molecular biology, 1990, Volume: 14, Issue:2 Topics: Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; DNA, Bacterial; Genes, Bacterial; Kinetics; Molecular Sequence Data; Nicotiana; Plant Tumors; Plants, Toxic; Plasmids; Protein Conformation; Restriction Mapping; Rhizobium; Transcription, Genetic; Virulence; Virulence Factors	1990
Characteristics of the nopaline catabolic plasmid in Agrobacterium strains K84 and K1026 used for biological control of crown gall disease. Plasmid, 1990, Volume: 23, Issue:2 Topics: Arginine; Base Sequence; Cosmids; DNA, Bacterial; Escherichia coli; Genetic Vectors; Nucleic Acid Hybridization; Plant Diseases; Plant Tumors; Plasmids; Restriction Mapping; Rhizobium; Sequence Homology, Nucleic Acid	1990
Characterization of the virB operon of an Agrobacterium tumefaciens Ti plasmid: nucleotide sequence and protein analysis. Molecular microbiology, 1990, Volume: 4, Issue:7 Topics: Adenosine Triphosphate; Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; Binding Sites; Gene Expression Regulation, Bacterial; Molecular Sequence Data; Operon; Plasmids; Rhizobium; Sequence Homology, Nucleic Acid; Virulence Factors	1990
VirD2 gene product from the nopaline plasmid pTiC58 has at least two activities required for virulence. Nucleic acids research, 1990, Dec-11, Volume: 18, Issue:23 Topics: Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; Blotting, Southern; DNA, Bacterial; Genes; Genetic Complementation Test; Molecular Sequence Data; Mutagenesis, Insertional; Open Reading Frames; Plants; Plasmids; Rhizobium; Sequence Homology, Nucleic Acid; Virulence Factors	1990
The virB operon of Agrobacterium tumefaciens pTiC58 encodes 11 open reading frames. Molecular & general genetics : MGG, 1990, Volume: 221, Issue:2 Topics: Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; Electrophoresis, Polyacrylamide Gel; Molecular Sequence Data; Operon; Plasmids; Protein Biosynthesis; Restriction Mapping; Rhizobium; Virulence Factors	1990
Ornithine cyclodeaminase from octopine Ti plasmid Ach5: identification, DNA sequence, enzyme properties, and comparison with gene and enzyme from nopaline Ti plasmid C58. Journal of bacteriology, 1989, Volume: 171, Issue:2 Topics: Amino Acid Sequence; Ammonia-Lyases; Arginine; Base Sequence; Escherichia coli; Genes; Genes, Bacterial; Molecular Sequence Data; Plasmids; Restriction Mapping	1989
Opines stimulate induction of the vir genes of the Agrobacterium tumefaciens Ti plasmid. Journal of bacteriology, 1989, Volume: 171, Issue:7 Topics: Acetophenones; Amino Acids; Arginine; DNA, Bacterial; Gene Expression Regulation; Genes, Bacterial; Gossypium; Plasmids; Rhizobium; Transcriptional Activation; Transformation, Genetic	1989
Characterization of the virA virulence gene of the nopaline plasmid, pTiC58, of Agrobacterium tumefaciens. Molecular microbiology, 1989, Volume: 3, Issue:9 Topics: Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; Molecular Sequence Data; Plasmids; Promoter Regions, Genetic; Restriction Mapping; Rhizobium; Sequence Homology, Nucleic Acid; Virulence	1989
Characterization and mapping of the agrocinopine-agrocin 84 locus on the nopaline Ti plasmid pTiC58. Journal of bacteriology, 1988, Volume: 170, Issue:4 Topics: Adenine Nucleotides; Arginine; Bacteriocins; Cloning, Molecular; Cosmids; DNA Restriction Enzymes; Escherichia coli; Gene Expression Regulation; Genes, Bacterial; Mutation; Plasmids; Rhizobium; Sugar Phosphates; Transcription, Genetic	1988
Regulation of the virC and virD promoters of pTiC58 by the ros chromosomal mutation of Agrobacterium tumefaciens. Molecular microbiology, 1988, Volume: 2, Issue:3 Topics: Acetophenones; Acetyltransferases; Arginine; Base Sequence; Chloramphenicol O-Acetyltransferase; Cloning, Molecular; DNA-Directed RNA Polymerases; DNA, Bacterial; Endonucleases; Enzyme Induction; Gene Expression Regulation; Molecular Sequence Data; Mutation; Plasmids; Promoter Regions, Genetic; Recombinant Fusion Proteins; Rhizobium; Single-Strand Specific DNA and RNA Endonucleases; Transcription, Genetic; Transformation, Genetic	1988
High levels of double-stranded transferred DNA (T-DNA) processing from an intact nopaline Ti plasmid. Proceedings of the National Academy of Sciences of the United States of America, 1989, Volume: 86, Issue:7 Topics: Arginine; Blotting, Southern; DNA, Bacterial; Genes, Bacterial; Kinetics; Mutation; Plant Tumors; Plasmids; Restriction Mapping; Rhizobium	1989
The Noc region of Ti plasmid C58 codes for arginase and ornithine cyclodeaminase. European journal of biochemistry, 1987, Aug-17, Volume: 167, Issue:1 Topics: Ammonia-Lyases; Arginase; Arginine; Bacterial Proteins; Deoxyribonuclease BamHI; Deoxyribonuclease EcoRI; Deoxyribonuclease HindIII; DNA Restriction Enzymes; Plant Tumors; Plasmids; Proline; Promoter Regions, Genetic; Rhizobium	1987
Ornithine cyclodeaminase from Ti plasmid C58: DNA sequence, enzyme properties and regulation of activity by arginine. European journal of biochemistry, 1988, Apr-05, Volume: 173, Issue:1 Topics: Amino Acid Sequence; Ammonia-Lyases; Arginine; Base Sequence; Escherichia coli; Gene Expression Regulation; Immune Sera; Molecular Sequence Data; Plasmids; Recombinant Fusion Proteins; Rhizobium	1988
virA and virG are the Ti-plasmid functions required for chemotaxis of Agrobacterium tumefaciens towards acetosyringone. Molecular microbiology, 1988, Volume: 2, Issue:3 Topics: Acetophenones; Arginine; Bacterial Proteins; Chemotactic Factors; Chemotaxis; Chromosome Mapping; Cloning, Molecular; Cosmids; Gene Expression Regulation; Membrane Proteins; Methyl-Accepting Chemotaxis Proteins; Mutation; Plasmids; Rhizobium; Transfection	1988
Analysis of Agrobacterium tumefaciens virulence mutants in leaf discs. Proceedings of the National Academy of Sciences of the United States of America, 1986, Volume: 83, Issue:8 Topics: Arginine; Cells, Cultured; Mutation; Plasmids; Rhizobium; Transformation, Genetic	1986
Modification of T-DNA of nopaline Ti plasmid by intermediary vector and utilization of agrocin 84 sensitivity as simple criterion of conjugation transfer of modified Ti plasmid. Folia microbiologica, 1986, Volume: 31, Issue:2 Topics: Adenine Nucleotides; Amino Acid Oxidoreductases; Anti-Bacterial Agents; Arginine; Chloramphenicol; Conjugation, Genetic; DNA, Bacterial; Drug Resistance, Microbial; Escherichia coli; Genetic Vectors; Nicotiana; Plants; Plants, Toxic; Plasmids; Rhizobium	1986
Characterization of the virE locus of Agrobacterium tumefaciens plasmid pTiC58. Journal of bacteriology, 1987, Volume: 169, Issue:4 Topics: Acetophenones; Arginine; Base Sequence; Escherichia coli; Genetic Complementation Test; Operon; Plant Tumors; Plasmids; Promoter Regions, Genetic; Rhizobium; Transcription, Genetic	1987
Detection of opines by colorimetric assay. Analytical biochemistry, 1987, Feb-01, Volume: 160, Issue:2 Topics: Arginine; Cell Transformation, Neoplastic; Colorimetry; Nicotiana; Plant Tumors; Plants, Toxic	1987
Proline biosynthesis encoded by the noc and occ loci of Agrobacterium Ti plasmids. Journal of bacteriology, 1986, Volume: 167, Issue:2 Topics: Arginine; Genes; Genes, Bacterial; Ornithine; Plasmids; Proline; Rhizobium	1986
Molecular characterization of a host-range-determining locus from Agrobacterium tumefaciens. Journal of bacteriology, 1986, Volume: 168, Issue:1 Topics: Arginine; Bacterial Proteins; Base Sequence; Operon; Plant Tumors; Plants; Plasmids; Rhizobium	1986
The hypervirulence of Agrobacterium tumefaciens A281 is encoded in a region of pTiBo542 outside of T-DNA. Journal of bacteriology, 1986, Volume: 168, Issue:3 Topics: Amino Acids; Arginine; DNA, Bacterial; Genes, Bacterial; Genetic Vectors; Indoleacetic Acids; Nicotiana; Plant Tumors; Plants; Plants, Toxic; Plasmids; Rhizobium; Virulence	1986
The in vitro effects of opines and other compounds on DNAs originating from bacteria, and from healthy and tumorous plant tissues. Experimental cell biology, 1985, Volume: 53, Issue:6 Topics: 9,10-Dimethyl-1,2-benzanthracene; Arginine; Cyclophosphamide; DNA Replication; DNA, Bacterial; DNA, Neoplasm; Indoleacetic Acids; Plant Tumors; Plants; Rhizobium	1985
N2-(1-carboxyethyl)methionine. A 'pseudo-opine' in octopine-type crown-gall tumours. The Biochemical journal, 1985, Dec-01, Volume: 232, Issue:2 Topics: Arginine; Electrophoresis, Paper; Methionine; Plasmids; Rhizobium	1985
Utilization of octopine and nopaline by Agrobacterium. Journal of bacteriology, 1973, Volume: 116, Issue:1 Topics: Arginine; Chromatography, Ion Exchange; Culture Media; Glutarates; Plant Tumors; Propionates; Rhizobium; Species Specificity; Spectrophotometry; Virulence	1973
A comparison of virulence determinants in an octopine Ti plasmid, a nopaline Ti plasmid, and an Ri plasmid by complementation analysis of Agrobacterium tumefaciens mutants. Plasmid, 1984, Volume: 11, Issue:3 Topics: Arginine; DNA Transposable Elements; Genetic Complementation Test; Plant Tumors; Plasmids; Rhizobium; Species Specificity; Virulence	1984
Molecular cloning of overlapping segments of the nopaline Ti-plasmid pTiC58 as a means to restriction endonuclease mapping. Plasmid, 1980, Volume: 3, Issue:2 Topics: Arginine; Cloning, Molecular; DNA Restriction Enzymes; DNA, Bacterial; Electrophoresis, Agar Gel; Genes, Bacterial; Genetic Vectors; Nucleic Acid Hybridization; Plasmids; Rhizobium	1980
The functional organization of the nopaline A. tumefaciens plasmid pTiC58. Plasmid, 1980, Volume: 3, Issue:2 Topics: Arginine; Conjugation, Genetic; DNA Transposable Elements; DNA, Bacterial; Genes, Bacterial; Plasmids; Rhizobium	1980
The interaction of Agrobacterium Ti-plasmid DNA and plant cells. Proceedings of the Royal Society of London. Series B, Biological sciences, 1980, Nov-19, Volume: 210, Issue:1180 Topics: Amino Acids; Arginine; Chromosome Mapping; Cloning, Molecular; DNA Transposable Elements; DNA, Bacterial; Genetic Engineering; Plants; Plasmids; Rhizobium	1980
Hairy root: plasmid encodes virulence traits in Agrobacterium rhizogenes. Journal of bacteriology, 1980, Volume: 141, Issue:3 Topics: Arginine; Bacteriocins; Conjugation, Genetic; DNA Restriction Enzymes; Glutarates; Kanamycin; Plant Diseases; Plasmids; Rhizobium	1980
Physical mapping of DNA base sequence homologies between an octopine and a nopaline Ti plasmid of Agrobacterium tumefaciens. Journal of molecular biology, 1981, Oct-25, Volume: 152, Issue:2 Topics: Arginine; Base Sequence; Chromosome Mapping; DNA Restriction Enzymes; DNA, Bacterial; Electrophoresis, Agar Gel; Microscopy, Electron; Nucleic Acid Heteroduplexes; Nucleic Acid Hybridization; Plasmids; Rhizobium	1981
Size, location and polarity of T-DNA-encoded transcripts in nopaline crown gall tumors; common transcripts in octopine and nopaline tumors. Cell, 1983, Volume: 32, Issue:4 Topics: Arginine; Base Sequence; Deoxyribonuclease HindIII; DNA Restriction Enzymes; Gene Expression; Nicotiana; Nucleic Acid Hybridization; Plant Tumors; Plants; Plants, Toxic; Plasmids; Protein Biosynthesis; Rhizobium; Transcription, Genetic	1983
T-DNA fragments of hairy root plasmid pRi8196 are distantly related to octopine and nopaline Ti plasmid T-DNA. Plasmid, 1984, Volume: 11, Issue:2 Topics: Arginine; Biological Evolution; Chromosome Mapping; DNA Restriction Enzymes; DNA, Bacterial; Nucleic Acid Hybridization; Plasmids; Rhizobium	1984
Mapping of promoter-proximal regions by in vitro transcription of two Agrobacterium tumefaciens Ti-plasmids. Molecular biology reports, 1984, Volume: 10, Issue:1 Topics: Arginine; DNA-Directed RNA Polymerases; Electrophoresis, Agar Gel; Operon; Plasmids; Rhizobium; Transcription, Genetic	1984
[Optimization of liquid scintillation counting by using multichannel pulse-height analyzer]. Radioisotopes, 1984, Volume: 33, Issue:8 Topics: Arginine; Base Sequence; DNA; Hybridization, Genetic; Plant Tumors; Plasmids; Rhizobium	1984
Detection of tumor-inducing plasmid DNA sequence in Agrobacterium tumefaciens by DNA-DNA hybridization. Radioisotopes, 1984, Volume: 33, Issue:8 Topics: Arginine; Base Sequence; DNA, Bacterial; Nucleic Acid Hybridization; Plant Tumors; Plasmids; Rhizobium	1984
A functional map of the nopaline catabolism genes on the Ti plasmid of Agrobacterium tumefaciens C58. Molecular & general genetics : MGG, 1983, Volume: 191, Issue:1 Topics: Arginine; Chromosome Mapping; Chromosomes, Bacterial; Electrophoresis, Polyacrylamide Gel; Genes; Plasmids; Rhizobium	1983
Genetic analysis of T-DNA transcripts in nopaline crown galls. Cell, 1983, Volume: 32, Issue:4 Topics: Arginine; Cell Differentiation; Gene Expression; Genes; Indoleacetic Acids; Mutation; Nicotiana; Plant Cells; Plant Tumors; Plants; Plants, Toxic; Plasmids; Rhizobium; Sugar Phosphates; Transcription, Genetic	1983
A new opine derived from nopaline. The Journal of biological chemistry, 1983, Jun-25, Volume: 258, Issue:12 Topics: Arginine; Magnetic Resonance Spectroscopy; Rhizobium; Structure-Activity Relationship	1983
Site-specific mutagenesis of Agrobacterium Ti plasmids and transfer of genes to plant cells. Journal of molecular and applied genetics, 1981, Volume: 1, Issue:2 Topics: Arginine; Cloning, Molecular; DNA, Bacterial; DNA, Viral; Escherichia coli; Mutation; Nicotiana; Plant Tumors; Plant Viruses; Plants, Toxic; Plasmids; Rhizobium	1981
Relationship between Nif plasmids of fast-growing Rhizobium species and Ti plasmids of Agrobacterium tumefaciens. Journal of bacteriology, 1982, Volume: 149, Issue:3 Topics: Arginine; Base Sequence; Nitrogen Fixation; Nucleic Acid Hybridization; Plant Tumors; Plasmids; Rhizobium	1982
Secretion of trans-zeatin by Agrobacterium tumefaciens: a function determined by the nopaline Ti plasmid. Biochemical and biophysical research communications, 1982, Feb-26, Volume: 104, Issue:4 Topics: Arginine; Mass Spectrometry; Plasmids; Purines; Radioimmunoassay; Rhizobium; Zeatin	1982
Multiple transcripts of T-DNA detected in nopaline crown gall tumors. Journal of molecular and applied genetics, 1982, Volume: 1, Issue:6 Topics: Arginine; Cells, Cultured; DNA, Bacterial; Nicotiana; Plants, Toxic; Plasmids; Rhizobium; RNA, Messenger; Transcription, Genetic	1982
Retention of tumor markers in F1 progeny plants from in vitro induced octopine and nopaline tumor tissues. Cell, 1981, Volume: 24, Issue:3 Topics: Arginine; DNA, Bacterial; Meiosis; Nicotiana; Plant Tumors; Plants, Toxic; Plasmids; Rhizobium	1981
Interactions between octopine and nopaline plasmids in Agrobacterium tumefaciens. Journal of bacteriology, 1980, Volume: 143, Issue:3 Topics: Arginine; Glutarates; Plant Tumors; Plasmids; Recombination, Genetic; Replicon; Rhizobium	1980
An Agrobacterium virulence factor encoded by a Ti plasmid gene or a chromosomal gene is required for T-DNA transfer into plants. Molecular microbiology, 1995, Volume: 17, Issue:2 Topics: Acetophenones; Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Base Sequence; Chromosomes, Bacterial; DNA-Binding Proteins; DNA, Bacterial; Gene Expression Regulation, Bacterial; Genes, Bacterial; Molecular Sequence Data; Plant Tumors; Plants; Plasmids; Protein Sorting Signals; Restriction Mapping; Sequence Analysis, DNA; Transformation, Genetic; Virulence; Virulence Factors	1995
Transformation of soybean (Glycine max) via Agrobacterium tumefaciens and analysis of transformed plants. Methods in molecular biology (Clifton, N.J.), 1995, Volume: 44 Topics: Agriculture; Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Base Sequence; DNA, Plant; Genes, Plant; Genetic Engineering; Genetic Vectors; Glycine max; Kanamycin Kinase; Kanamycin Resistance; Molecular Sequence Data; Phosphotransferases (Alcohol Group Acceptor); Plants, Genetically Modified; Polymerase Chain Reaction; Seeds; Transfection; Transformation, Genetic	1995
Effect of acetosyringone on growth and oncogenic potential of Agrobacterium tumefaciens. Methods in molecular biology (Clifton, N.J.), 1995, Volume: 44 Topics: Acetophenones; Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Carbohydrates; Chemotactic Factors; Gene Expression Regulation, Bacterial; Growth Inhibitors; Mutation; Phenols; Plant Tumors; Plasmids; Selection, Genetic; Virulence; Virulence Factors	1995
Peanut transformation. Methods in molecular biology (Clifton, N.J.), 1995, Volume: 44 Topics: Agriculture; Agrobacterium tumefaciens; Arachis; Arginine; Bacterial Proteins; Conjugation, Genetic; Cotyledon; Disease Susceptibility; Gene Expression Regulation, Bacterial; Genes, Plant; Genetic Engineering; Genetic Vectors; Glucuronidase; Introns; Kanamycin Kinase; Oxazines; Phosphotransferases (Alcohol Group Acceptor); Plant Leaves; Plant Proteins; Plant Tumors; Plants, Genetically Modified; Recombinant Fusion Proteins; Species Specificity; Transfection	1995
Divergent transcription and a remote operator play a role in control of expression of a nopaline catabolism promoter in Agrobacterium tumefaciens. The Journal of biological chemistry, 1995, May-26, Volume: 270, Issue:21 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Base Sequence; Gene Expression Regulation, Bacterial; Membrane Transport Proteins; Molecular Sequence Data; Nucleic Acid Conformation; Operator Regions, Genetic; Plasmids; Promoter Regions, Genetic; Regulatory Sequences, Nucleic Acid; Repressor Proteins; Transcription, Genetic	1995
Agrobacterium vitis nopaline Ti plasmid pTiAB4: relationship to other Ti plasmids and T-DNA structure. Molecular & general genetics : MGG, 1994, Nov-15, Volume: 245, Issue:4 Topics: Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; Conjugation, Genetic; DNA, Bacterial; Fruit; Molecular Sequence Data; Phylogeny; Plant Tumors; Plasmids; Restriction Mapping; Rhizobium; Sequence Homology, Nucleic Acid; Virulence	1994
A new Agrobacterium strain isolated from aerial tumors on Ficus benjamina L. Applied and environmental microbiology, 1995, Volume: 61, Issue:1 Topics: Arginine; Base Sequence; DNA, Bacterial; Fatty Acids; Glutamine; Molecular Sequence Data; Phylogeny; Plant Tumors; Proline; Rhizobium; Sequence Alignment	1995
Identification of Agrobacterium strains by PCR-RFLP analysis of pTi and chromosomal regions. Archives of microbiology, 1994, Volume: 161, Issue:4 Topics: Arginine; Base Sequence; Chromosomes, Bacterial; DNA Primers; Genes, Bacterial; Molecular Sequence Data; Plasmids; Polymerase Chain Reaction; Polymorphism, Restriction Fragment Length; Restriction Mapping; Rhizobium; Virulence	1994
Octopine and nopaline oxidases from Ti plasmids of Agrobacterium tumefaciens: molecular analysis, relationship, and functional characterization. Journal of bacteriology, 1994, Volume: 176, Issue:15 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Arginine; Base Sequence; Molecular Sequence Data; Oxidoreductases Acting on CH-NH Group Donors; Plasmids; Sequence Analysis, DNA; Sequence Homology, Amino Acid; Structure-Activity Relationship; Substrate Specificity	1994
The NocR repressor-activator protein regulates expression of the nocB and nocR genes of Agrobacterium tumefaciens. Molecular & general genetics : MGG, 1994, Aug-15, Volume: 244, Issue:4 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Base Sequence; Carrier Proteins; Gene Expression Regulation, Bacterial; Genes, Bacterial; Genes, Reporter; Luciferases; Molecular Sequence Data; Operon; Promoter Regions, Genetic; Repressor Proteins; Transcription Factors; Transcription, Genetic	1994
Nopaline causes a conformational change in the NocR regulatory protein-nocR promoter complex of Agrobacterium tumefaciens Ti plasmid pTiT37. Molecular & general genetics : MGG, 1993, Volume: 241, Issue:1-2 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; Binding Sites; DNA-Binding Proteins; DNA, Bacterial; Escherichia coli; Molecular Sequence Data; Operator Regions, Genetic; Plasmids; Promoter Regions, Genetic; Protein Conformation; Repressor Proteins; Sequence Analysis, DNA; Transcription Factors	1993
Opine-regulated promoters and LysR-type regulators in the nopaline (noc) and octopine (occ) catabolic regions of Ti plasmids of Agrobacterium tumefaciens. Journal of bacteriology, 1994, Volume: 176, Issue:2 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Base Sequence; DNA-Binding Proteins; DNA, Bacterial; Molecular Sequence Data; Plasmids; Promoter Regions, Genetic; Protein Binding; Repressor Proteins; Sequence Homology, Nucleic Acid; Transcription Factors	1994
Characterization of a nopaline-induced gene for a 40 kDa protein in the nopaline catabolic (noc) region of Ti plasmid pTiC58. Biochimica et biophysica acta, 1993, Sep-23, Volume: 1174, Issue:3 Topics: Amino Acid Sequence; Arginine; Bacterial Proteins; Base Sequence; Molecular Sequence Data; Oxidoreductases; Plasmids; Repressor Proteins; Transcription Factors	1993
Transgenic N. glauca plants expressing bacterial virulence gene virF are converted into hosts for nopaline strains of A. tumefaciens. Nature, 1993, May-06, Volume: 363, Issue:6424 Topics: Agrobacterium tumefaciens; Amino Acids; Arginine; Bacterial Proteins; DNA, Bacterial; Gene Expression; Genes, Bacterial; Nicotiana; Plant Diseases; Plants, Genetically Modified; Plants, Toxic; Virulence	1993
Ti plasmid-encoded octopine and nopaline catabolism in Agrobacterium: specificities of the LysR-type regulators OccR and NocR, and protein-induced DNA bending. Molecular & general genetics : MGG, 1995, Nov-01, Volume: 249, Issue:1 Topics: Arginine; Bacterial Proteins; Base Sequence; Binding Sites; DNA-Binding Proteins; DNA, Fungal; Gene Expression Regulation, Bacterial; Genes, Plant; Molecular Sequence Data; Open Reading Frames; Plasmids; Promoter Regions, Genetic; Repressor Proteins; Rhizobium; Transcription Factors	1995
Crown gall culture and production of tanshinone in Salvia miltiorrhiza. Chinese journal of biotechnology, 1995, Volume: 11, Issue:2 Topics: Abietanes; Agrobacterium tumefaciens; Anti-Bacterial Agents; Arginine; Cells, Cultured; Drugs, Chinese Herbal; Phenanthrenes; Plant Tumors; Plasmids; Spectrophotometry; Transformation, Genetic; Ultraviolet Rays	1995
The tra region of the nopaline-type Ti plasmid is a chimera with elements related to the transfer systems of RSF1010, RP4, and F. Journal of bacteriology, 1996, Volume: 178, Issue:14 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Arginine; Bacterial Outer Membrane Proteins; Bacterial Proteins; Base Sequence; Chromosome Mapping; Conjugation, Genetic; Escherichia coli Proteins; Fimbriae Proteins; Genes, Bacterial; Membrane Proteins; Molecular Sequence Data; Mutagenesis, Insertional; Plasmids; Recombinant Proteins; Replication Origin; Sequence Analysis, DNA; Sequence Homology, Amino Acid; Transcription, Genetic	1996
Ti plasmid conjugation is independent of vir: reconstitution of the tra functions from pTiC58 as a binary system. Journal of bacteriology, 1997, Volume: 179, Issue:4 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Conjugation, Genetic; DNA Helicases; DNA, Bacterial; Escherichia coli Proteins; Gram-Negative Bacteria; Operon; Plasmids; Replication Origin; Transcription Factors; Virulence Factors	1997
Characterization of a hexamer motif and b element of the nopaline synthase (nos) promoter. Molecules and cells, 1997, Feb-28, Volume: 7, Issue:1 Topics: Agrobacterium tumefaciens; Amino Acid Oxidoreductases; Arginine; Base Sequence; DNA, Bacterial; Escherichia coli; Molecular Sequence Data; Nicotiana; Plants, Genetically Modified; Plants, Toxic; Point Mutation; Promoter Regions, Genetic; Sequence Deletion	1997
Characterization of the acc operon from the nopaline-type Ti plasmid pTiC58, which encodes utilization of agrocinopines A and B and susceptibility to agrocin 84. Journal of bacteriology, 1997, Volume: 179, Issue:23 Topics: Adenine Nucleotides; Agrobacterium tumefaciens; Amino Acid Sequence; Anti-Bacterial Agents; Arginine; ATP-Binding Cassette Transporters; Bacterial Proteins; Base Sequence; Biological Transport; DNA, Bacterial; Drug Resistance, Microbial; Escherichia coli; Gene Expression Regulation, Bacterial; Genes, Bacterial; Genes, Reporter; Genetic Complementation Test; Molecular Sequence Data; Operon; Plasmids; Sequence Analysis, DNA; Sequence Homology, Amino Acid; Sugar Phosphates	1997
Novel structural difference between nopaline- and octopine-type trbJ genes: construction of genetic and physical map and sequencing of trb/traI and rep gene clusters of a new Ti plasmid pTi-SAKURA. Biochimica et biophysica acta, 1998, Mar-04, Volume: 1396, Issue:1 Topics: Agrobacterium tumefaciens; Arginine; Base Sequence; Chromosome Mapping; Cloning, Molecular; DNA Helicases; DNA-Binding Proteins; Escherichia coli Proteins; Molecular Sequence Data; Multigene Family; Plasmids; Polymerase Chain Reaction; Sequence Analysis, DNA; Sequence Homology, Nucleic Acid; Trans-Activators	1998
Ti plasmids from Agrobacterium characterize rootstock clones that initiated a spread of crown gall disease in Mediterranean countries. Applied and environmental microbiology, 1999, Volume: 65, Issue:9 Topics: Arginine; DNA, Bacterial; DNA, Ribosomal; Mediterranean Region; Plant Tumors; Plasmids; Polymerase Chain Reaction; Polymorphism, Restriction Fragment Length; Rhizobium; RNA, Ribosomal, 16S; Virulence	1999
Vir proteins stabilize VirB5 and mediate its association with the T pilus of Agrobacterium tumefaciens. Journal of bacteriology, 1999, Volume: 181, Issue:24 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Chromatography, Gel; Electrophoresis, Polyacrylamide Gel; Fimbriae, Bacterial; Membrane Proteins; Microscopy, Electron; Molecular Weight; Virulence Factors	1999
The replicator of the nopaline-type Ti plasmid pTiC58 is a member of the repABC family and is influenced by the TraR-dependent quorum-sensing regulatory system. Journal of bacteriology, 2000, Volume: 182, Issue:1 Topics: Arginine; Bacterial Proteins; Base Sequence; Conjugation, Genetic; Conserved Sequence; DNA Helicases; DNA Replication; DNA-Binding Proteins; Escherichia coli Proteins; Gene Dosage; Gene Expression Regulation; Homoserine; Molecular Sequence Data; Multigene Family; Plasmids; Proteins; Regulatory Sequences, Nucleic Acid; Rhizobium; Sequence Analysis, DNA; Sequence Homology, Nucleic Acid; Trans-Activators; Transcription Factors	2000
Effect of crop rotation and soil cover on alteration of the soil microflora generated by the culture of transgenic plants producing opines. Molecular ecology, 2000, Volume: 9, Issue:7 Topics: Arginine; Bacteria; Crops, Agricultural; DNA, Bacterial; Environmental Monitoring; Mannitol; Plant Roots; Plants, Genetically Modified; Rosales; Soil Microbiology; Triticum	2000
The complete nucleotide sequence of a plant root-inducing (Ri) plasmid indicates its chimeric structure and evolutionary relationship between tumor-inducing (Ti) and symbiotic (Sym) plasmids in Rhizobiaceae. Journal of molecular biology, 2001, Mar-30, Volume: 307, Issue:3 Topics: Arginine; ATP-Binding Cassette Transporters; Base Composition; Biological Transport; Blotting, Southern; Conjugation, Genetic; DNA Replication; DNA, Bacterial; DNA, Plant; DNA, Recombinant; Evolution, Molecular; Genes, Bacterial; Imidazoles; Open Reading Frames; Phylogeny; Physical Chromosome Mapping; Plant Diseases; Plant Roots; Plasmids; Pyridines; Recombination, Genetic; Rhizobiaceae; RNA, Bacterial; Symbiosis; Virulence	2001
Efficient vir gene induction in Agrobacterium tumefaciens requires virA, virG, and vir box from the same Ti plasmid. Journal of bacteriology, 2001, Volume: 183, Issue:13 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; DNA-Binding Proteins; Gene Expression Regulation, Bacterial; Genes, Bacterial; Nicotiana; Plants, Toxic; Plasmids; Regulatory Sequences, Nucleic Acid; Transcription Factors; Transcriptional Activation; Virulence Factors	2001
Sequence characterization of the vir region of a nopaline type Ti plasmid, pTi-SAKURA. Genes & genetic systems, 2001, Volume: 76, Issue:2 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Base Sequence; Chromosomes; Cloning, Molecular; Genes, Plant; Genetic Vectors; Models, Genetic; Molecular Sequence Data; Multigene Family; Plasmids; Sequence Analysis, DNA; Virulence Factors	2001
Two opines control conjugal transfer of an Agrobacterium plasmid by regulating expression of separate copies of the quorum-sensing activator gene traR. Journal of bacteriology, 2002, Volume: 184, Issue:4 Topics: Arginine; Bacterial Proteins; Base Sequence; Chromosome Mapping; Cloning, Molecular; Conjugation, Genetic; DNA, Bacterial; Gene Expression Regulation, Bacterial; Genes, Bacterial; Molecular Sequence Data; Mutagenesis; Plasmids; Rhizobium; Sequence Analysis, DNA; Sugar Phosphates	2002
Engineered rhizosphere: the trophic bias generated by opine-producing plants is independent of the opine type, the soil origin, and the plant species. Applied and environmental microbiology, 2002, Volume: 68, Issue:5 Topics: Arginine; Lotus; Mannitol; Plant Roots; Soil Microbiology; Solanaceae	2002
[Genetic transformation of hairy roots in Trichosanthes kirilowii Maxim. by Ti and Ri plasmids]. Zhongguo Zhong yao za zhi = Zhongguo zhongyao zazhi = China journal of Chinese materia medica, 2001, Volume: 26, Issue:3 Topics: Arginine; Mannitol; Plant Roots; Plant Tumors; Plants, Medicinal; Plasmids; Rhizobium; Transformation, Genetic; Trichosanthes	2001
Engineering root exudation of Lotus toward the production of two novel carbon compounds leads to the selection of distinct microbial populations in the rhizosphere. Microbial ecology, 2004, Volume: 47, Issue:1 Topics: Arginine; Bacteria; Cluster Analysis; France; Genetic Variation; Lotus; Mannitol; Phylogeny; Plant Roots; Plants, Genetically Modified; Polymorphism, Restriction Fragment Length; RNA, Ribosomal, 16S; Sequence Analysis, DNA; Sequence Homology	2004
Release of periplasmic proteins of Brucella suis upon acidic shock involves the outer membrane protein Omp25. Infection and immunity, 2004, Volume: 72, Issue:10 Topics: Acetates; Acids; Amino Acid Sequence; Arginine; Bacterial Outer Membrane Proteins; Base Sequence; Brucella suis; Buffers; Cell Surface Extensions; Genes, Bacterial; Genomics; Hydrogen-Ion Concentration; Macrophages; Molecular Sequence Data; Mutation; Periplasmic Proteins; Permeability; Phagosomes; Protein Binding; Ribose; Sequence Homology; Solubility; Virulence Factors	2004
An integrated view of gene expression and solute profiles of Arabidopsis tumors: a genome-wide approach. The Plant cell, 2006, Volume: 18, Issue:12 Topics: Arabidopsis; Arginine; Carbohydrate Metabolism; Cell Wall; Cluster Analysis; Computational Biology; DNA, Bacterial; Energy Metabolism; Gene Expression Profiling; Gene Expression Regulation, Plant; Genome, Plant; Genomics; Lipid Metabolism; Nitrate Reductase; Nitrogen; Oligonucleotide Array Sequence Analysis; Photosynthesis; Plant Diseases; Plant Proteins; Reproducibility of Results; Reverse Transcriptase Polymerase Chain Reaction; Rhizobium; RNA, Messenger	2006
VirB1* promotes T-pilus formation in the vir-Type IV secretion system of Agrobacterium tumefaciens. Journal of bacteriology, 2007, Volume: 189, Issue:18 Topics: Agrobacterium tumefaciens; Amino Acid Sequence; Arginine; Bacterial Proteins; Fimbriae, Bacterial; Gene Expression Regulation, Bacterial; Kalanchoe; Molecular Sequence Data; Peptidoglycan Glycosyltransferase; Plant Leaves; Plant Tumors; Two-Hybrid System Techniques; Virulence; Virulence Factors	2007
Genome sequence of Novosphingobium sp. strain Rr 2-17, a nopaline crown gall-associated bacterium isolated from Vitis vinifera L. grapevine. Journal of bacteriology, 2012, Volume: 194, Issue:18 Topics: Acyl-Butyrolactones; Arginine; DNA, Bacterial; Genome, Bacterial; Molecular Sequence Data; Plant Tumors; Sequence Analysis, DNA; Sphingomonadaceae; Vitis	2012
Biological activity of the tzs gene of nopaline Agrobacterium tumefaciens GV3101 in plant regeneration and genetic transformation. Molecular plant-microbe interactions : MPMI, 2013, Volume: 26, Issue:11 Topics: Agrobacterium tumefaciens; Arginine; DNA, Bacterial; DNA, Plant; Genetic Engineering; Genetic Vectors; Nicotiana; Plant Leaves; Plant Shoots; Plants; Plants, Genetically Modified; Plasmids; Real-Time Polymerase Chain Reaction; Regeneration; Species Specificity; Transformation, Genetic; Virulence; Zeatin	2013
Concerted transfer of the virulence Ti plasmid and companion At plasmid in the Agrobacterium tumefaciens-induced plant tumour. Molecular microbiology, 2013, Volume: 90, Issue:6 Topics: Agrobacterium tumefaciens; Arabidopsis; Arginine; Bacterial Proteins; Bacterial Secretion Systems; Chromosomes, Bacterial; Conjugation, Genetic; DNA, Bacterial; Gene Expression Profiling; Gene Expression Regulation, Bacterial; Genes, Bacterial; Genes, Regulator; Plant Tumor-Inducing Plasmids; Plant Tumors; Quorum Sensing; Replicon; Repressor Proteins; Sequence Analysis, DNA; Sugar Phosphates; Virulence Factors	2013
Agrobacterium uses a unique ligand-binding mode for trapping opines and acquiring a competitive advantage in the niche construction on plant host. PLoS pathogens, 2014, Volume: 10, Issue:10 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; DNA, Bacterial; Gene Expression Regulation, Bacterial; Genes, Bacterial; Ligands; Plant Tumors; Plasmids	2014
Characterization of Flavin-Containing Opine Dehydrogenase from Bacteria. PloS one, 2015, Volume: 10, Issue:9 Topics: Arginine; Flavins; Oxidoreductases Acting on CH-NH Group Donors; Pseudomonas putida	2015
Nopaline-type Ti plasmid of Agrobacterium encodes a VirF-like functional F-box protein. Scientific reports, 2015, Nov-20, Volume: 5 Topics: Agrobacterium; Amino Acid Sequence; Arginine; Bacterial Proteins; F-Box Proteins; Interferon Regulatory Factors; Luminescent Proteins; Microscopy, Confocal; Molecular Sequence Data; Nicotiana; Phylogeny; Plant Tumor-Inducing Plasmids; Plants, Genetically Modified; Protein Binding; Sequence Homology, Amino Acid; Viral Proteins; Virulence Factors	2015
Fitness costs restrict niche expansion by generalist niche-constructing pathogens. The ISME journal, 2017, Volume: 11, Issue:2 Topics: Agrobacterium tumefaciens; Arginine; Bacterial Proteins; Carrier Proteins; Models, Molecular; Plants; Plants, Genetically Modified	2017
Structural basis for high specificity of octopine binding in the plant pathogen Agrobacterium tumefaciens. Scientific reports, 2017, 12-21, Volume: 7, Issue:1 Topics: Agrobacterium tumefaciens; Arginine; ATP-Binding Cassette Transporters; Bacterial Proteins; Host-Pathogen Interactions; Protein Binding	2017
Lifestyle of the biotroph Agrobacterium tumefaciens in the ecological niche constructed on its host plant. The New phytologist, 2018, Volume: 219, Issue:1 Topics: Agrobacterium tumefaciens; Arabidopsis; Arginine; Bacterial Proteins; Carbon; Cell Wall; Chemotaxis; Ecosystem; Gene Expression Regulation, Bacterial; Genome, Bacterial; Host-Pathogen Interactions; Iron; Mutation; Nitrogen; Plant Tumors; Plants, Genetically Modified; Sugar Phosphates	2018
Evolutionary Relatedness and Classification of Tumor-Inducing and Opine-Catabolic Plasmids in Three Rhizobium rhizogenes Strains Isolated from the Same Crown Gall Tumor. Genome biology and evolution, 2019, 06-01, Volume: 11, Issue:6 Topics: Arginine; Conjugation, Genetic; Oxazines; Plant Tumors; Plasmids; Rhizobium; Virulence	2019
Complete Sequence of Succinamopine Ti-Plasmid pTiEU6 Reveals Its Evolutionary Relatedness with Nopaline-Type Ti-Plasmids. Genome biology and evolution, 2019, 09-01, Volume: 11, Issue:9 Topics: Agrobacterium tumefaciens; Amino Acids; Arginine; DNA Transposable Elements; DNA, Bacterial; Evolution, Molecular; Phylogeny; Plant Tumor-Inducing Plasmids; Plant Tumors; Sequence Analysis, DNA	2019
Development and validation of a UHPLC-ESI-QTOF mass spectrometry method to analyze opines, plant biomarkers of crown gall or hairy root diseases. Journal of chromatography. B, Analytical technologies in the biomedical and life sciences, 2021, Jan-01, Volume: 1162 Topics: Agrobacterium; Arginine; Biomarkers; Chromatography, High Pressure Liquid; Mannitol; Plant Diseases; Plant Roots; Plant Tumors; Reproducibility of Results; Spectrometry, Mass, Electrospray Ionization	2021