muramidase and allosamidin

The solution-state conformations of the hevamine inhibitor allosamidin and six potential inhibitor analogues were studied by various NMR spectroscopic techniques and molecular modeling using force field calculations. Determination solely of the global energy minimum conformation was found to be insufficient for consensus with the NMR results, and agreement between the NMR experimental data and the theoretical calculations was only reached by assessing the structures as population-weighted average conformers on the basis of Boltzmann distributions derived from the calculated relative energies. The conformations of the glycosidic linkages in the compounds were found to be similar when the sugar residues were the same, but differences were markedly evident otherwise and also for the various heterocyclic group linkages. The binding of the compounds to hevamine, which may also complex to chitinases in general, was assessed using HMQC, transfer-NOESY, and both 1-D and 2-D saturation transfer difference NMR experiments. Under the conditions employed, only allosamidin was implicated to be bound to hevamine, and then only by HMQC with the dipolar coupling-based experiments failing to substantiate the formation of the complex. However, the results are consistent with the biochemical activities of the compounds whereby only allosamidin has been shown to act as a competitive inhibitor.

Topics: Acetylglucosamine; Algorithms; Chitinases; Crystallography, X-Ray; Enzyme Inhibitors; Hevea; Ligands; Magnetic Resonance Spectroscopy; Models, Molecular; Molecular Conformation; Molecular Structure; Muramidase; Oligosaccharides; Plant Proteins; Solvents; Stereoisomerism; Structure-Activity Relationship; Trisaccharides

Based on NMR spectroscopic information about the allosamidin-hevamine complex, ab initio MO calculations of the ring current effect of the aromatic moieties of Trp255, Tyr183 and Tyr6 of hevamine were carried out to investigate the role of these amino acid residues in binding interactions with allosamidin in solution. In addition, the intermolecular steric compression effect on the 13C chemical shifts of the allosamizoline carbon atoms and the hydrogen bonding to Glu127 was identified. It can be inferred that the binding forces are strongest in the allosamizoline moiety of allosamidin.

Topics: Acetylglucosamine; Binding Sites; Chitinases; Enzyme Inhibitors; Hevea; Hydrogen Bonding; Insecticides; Macromolecular Substances; Models, Molecular; Models, Theoretical; Muramidase; Nuclear Magnetic Resonance, Biomolecular; Plant Proteins; Trisaccharides; Tryptophan; Tyrosine

The enzyme kinetics of hevamine, a chitinase from the rubber tree Hevea brasiliensis, were studied in detail with a new enzyme assay. In this assay, the enzyme reaction products were derivatized by reductive coupling to a chromophore. Products were separated by HPLC and the amount of product was calculated by peak integration. Penta-N-acetylglucosamine (penta-nag) and hexa-N-acetylglucosamine (hexa-nag) were used as substrates. Hexa-nag was more efficiently converted than penta-nag, which is an indication that hevamine has at least six sugar binding sites in the active site. Tetra-N-acetylglucosamine (tetra-nag) and allosamidin were tested as inhibitors. Allosamidin was found to be a competitive inhibitor with a K(i) of 3.1 microM. Under the conditions tested, tetra-nag did not inhibit hevamine.

Topics: Acetylglucosamine; Binding, Competitive; Chitinases; Chromatography, High Pressure Liquid; Coloring Agents; Euphorbiaceae; Kinetics; Muramidase; Oligosaccharides; Oxidation-Reduction; Plant Proteins; Thermodynamics; Trisaccharides

The plant enzyme hevamine has both chitinase and lysozyme activity. HPLC analysis of the products of the hydrolysis of chitopentaose shows that hevamine acts with retention of the configuration, despite the absence of a nucleophilic or stabilizing carboxylate. To analyze the stabilization of a putative oxocarbonium ion intermediate, the X-ray structure of hevamine complexed with the inhibitor allosamidin was determined at 1.85 A resolution. This structure supports the role of Glu127 as a proton donor. The allosamizoline group binds in the center of the active site, mimicking a reaction intermediate in which a positive charge at C1 is stabilized intramolecularly by the carbonyl oxygen of the N-acetyl group at C2.

Topics: Acetylglucosamine; Carbohydrate Sequence; Catalysis; Chitin; Chitinases; Crystallography, X-Ray; Glycoside Hydrolases; Hydrolysis; Molecular Sequence Data; Muramidase; Plant Proteins; Plants; Stereoisomerism; Substrate Specificity; Trisaccharides

Using colloidal [3H] chitin as a substrate, we provide the first demonstration of a chitinase in human leukocytes; chitinolytic activity in whole and disrupted leukocyte preparations (approximately 0.6 and 5.5 nmol of N-acetylglucosamine [GlcNAc] released min-1 mg of protein-1, respectively) was partially inhibited by the specific chitinase inhibitor allosamidin (9 microM). Following fractionation of the leukocytes, much higher levels of chitinase activity were detected in granulocyte-rich homogenates (approximately 7.2 nmol of GlcNAc released min-1 mg of protein-1) than in lymphocyte- and monocyte-rich homogenates (approximately 0.22 and 0.26 nmol of GlcNAc released min-1 mg of protein-1, respectively). Low levels of chitinase activity were detected in human serum (approximately 4 pmol of GlcNAc released min-1 mg of protein-1). Chitinolytic activity in granulocyte-rich homogenates and serum was partially inhibited by allosamidin (9 microM). Proteins with chitinolytic activities (approximate molecular masses, 48 and 56 kDa) distinct from lysozyme (14.3 kDa) were detected on polyacrylamide gels following the electrophoresis of human granulocyte-rich preparations. Chitinase activity, detected consistently in serum and leukocytes from all human volunteers investigated, may contribute to the protection of the host by cleaving chitin in the cell walls of fungal pathogens.

Topics: Acetylglucosamine; Adult; Chitin; Chitinases; Electrophoresis, Polyacrylamide Gel; Female; Humans; Leukocytes; Male; Molecular Weight; Muramidase; Trisaccharides