Page last updated: 2024-08-17

lysine and succinic acid

lysine has been researched along with succinic acid in 81 studies

Research

Studies (81)

TimeframeStudies, this research(%)All Research%
pre-19903 (3.70)18.7374
1990's2 (2.47)18.2507
2000's7 (8.64)29.6817
2010's51 (62.96)24.3611
2020's18 (22.22)2.80

Authors

AuthorsStudies
Choi, SS; Contrera, JF; Hastings, KL; Kruhlak, NL; Sancilio, LF; Weaver, JL; Willard, JM1
Prasad, GS; Vijayan, M1
Issachar, D; Lubin, E; Trumper, J; Weininger, J; Zabari, M1
Gallant, JA; Price, VL1
Yu, CA; Yu, L1
Arbing, MA; Boismenu, D; Coulton, JW; Dahan, D; Hanrahan, JW; Mamer, OA1
Jakobs, C; Roos, B; Struys, EA; Verhoeven, NM1
ACKERMANN, D1
Frasch, WD; Lowry, DS1
Anderlei, T; Binder, M; Büchs, J; Zimmermann, HF1
Pajor, AM; Weerachayaphorn, J1
Baatz, JE; Baynes, JW; Bethard, J; Blatnik, M; Brock, JW; Frizzell, N; Nagai, R; Thorpe, SR; Walla, MD1
Chakraborty, J; Das, N; Halder, UC1
Chen, Y; Dai, L; Tan, M; Xie, Z; Zhang, Z; Zhao, Y1
Auwerx, J; Cerione, RA; Chen, W; Choi, BH; Du, J; Hao, Q; He, B; Jiang, H; Khan, S; Kim, J; Kim, JH; Lin, H; Su, X; Woo, J; Yu, JJ; Zhang, S; Zhou, Y1
Aa, J; Cao, B; Ge, Y; Li, M; Liu, L; Liu, Z; Qin, W; Shi, J; Wang, G; Wang, X; Yu, X; Zha, W; Zhao, C; Zheng, T1
Kawamura, Y; Kosono, S; Nishiyama, M; Suzuki, S; Tamura, M; Yoshida, A; Yoshida, M1
Chen, R; Li, C; Li, W; Pan, J; Ye, Z1
Boylston, JA; Chen, Y; Gucek, M; Murphy, E; Sack, MN; Sun, J1
Cheng, Z; Damaris, RN; He, D; Li, M; Wang, Q; Yang, P; Yi, X1
Chou, KC; Jia, J; Liu, B; Liu, Z; Xiao, X1
Bundy, JG; Ebbels, TM; Hao, J; Liebeke, M; Sommer, U; Viant, MR1
Jin, W; Wu, F1
Chen, Y1
Guo, H; Meng, Y; Shen, C; Sun, T; Wang, H; Xue, J; Zhang, L1
Huang, H; Li, Q; Wang, G; Xie, J; Xie, L; Yu, Z; Zhou, M1
Alrob, OA; Altamimi, T; Fukushima, A; Kantor, PF; Lopaschuk, GD; Rawat, S; Rebeyka, IM; Wagg, CS; Zhang, L1
Chen, X; Cheng, K; Hua, Y; Shi, R; Suo, S; Tian, B; Wang, L; Wang, M; Xu, H; Xu, X; Zhao, Y; Zheng, Z1
Cao, H; Deng, X; Wang, J; Yan, Y; Yuan, L; Zhen, S; Zhu, G1
He, Y; Li, D; Li, X; Liu, J; Liu, W; Lv, G; Qian, G; Shen, Y; Zheng, H; Zhou, X1
Fukui, K; Kim, K; Kuramitsu, S; Masui, R; Okanishi, H; Yano, T1
Caudy, AA; Jiang, R; Lee, K; Meneghini, MD; Narula, A; Rosebrock, AP; Soloveychik, M; Xu, M; Zaslaver, O1
Chen, M; Deng, W; Fang, W; Li, J; Liao, W; Pan, W; Xie, J; Xie, L; Yu, Z1
Chen, C; Chen, X; Cheng, Z; Gao, P; Song, Y; Sun, J; Wang, J; Wang, Y; Wang, Z1
Chen, Y; Cho, EJ; Dalby, KN; Devkota, AK; Guo, HF; Kurie, JM; Phillips, GN; Russell, W; Yamauchi, M1
Dehzangi, A; Lal, SP; López, Y; Michaelson, J; Sattar, A; Sharma, A; Taherzadeh, G; Tsunoda, T1
Liang, W; Lin, Q; Mu, P; Song, L; Wang, G; Wang, S; Zhang, Y1
Ai, H; Chen, W; Hu, H; Huang, L; Liu, H; Ma, J; Wu, R; Wu, X; Zhang, L; Zhao, J1
Guo, D; Hasan, MM; Khatun, MS; Mollah, MNH; Yong, C1
Kawasaki, H; Komine-Abe, A; Kosono, S; Kubo, S; Nagano-Shoji, M; Nishiyama, M; Yoshida, M1
Finkemeier, I; Foyer, CH; Guan, W; Huang, J; Messens, J; Shen, W; Tossounian, MA; Wei, B; Wilson, MH; Xie, Y; Yang, X; Young, D; Zhou, H; Zhu, J1
Chen, J; Du, X; He, L; Li, F; Liu, Y; Ma, X; Meng, Z; Shen, W; Wang, Y1
Edelmann, MJ; Lv, Y; Meng, X; Mujahid, H; Peng, X; Peng, Z; Zhao, H1
Dehzangi, A; Lal, SP; López, Y; Sattar, A; Sharma, A; Taherzadeh, G; Tsunoda, T1
Chung, MWH; Feng, L; Hao, Q; Jin, J; Sun, H; Wang, Y1
Qiu, JD; Shi, SP; Wang, LN; Wen, PP; Xu, HD1
Broutin, I; Cosette, P; Dé, E; Gaviard, C; Hardouin, J; Jouenne, T1
Bi, J; Gao, R; Gong, D; Kong, C; Li, J; Li, Z; Liu, X; Wang, J; Xu, X; Yang, J; Zhang, N; Zhang, Z; Zhu, Y1
Cilibrizzi, A; Ferraro, G; Infrasca, T; Marzo, T; Merlino, A; Messori, L; Vilar, R1
Chen, L; Cheng, H; Li, W; Liu, C; Liu, Y; Zhang, B; Zhang, M1
Basisty, N; Gibson, BW; Meyer, JG; Schilling, B; Wei, L1
Chen, J; Dai, L; Fang, X; Jiang, A; Liu, H; Sheng, Z; Wang, F; Xi, X; Xin, Y; Yan, C; Yang, J; Zha, Q; Zhang, L1
Hasan, MM; Kurata, H1
Kondo, N; Kosono, S; Nishiyama, M; Suzuki, S; Yoshida, M1
Hasan, MM; Khatun, MS; Kurata, H1
Dai, B; Deng, Y; Huang, S1
Chai, R; Hao, Z; Li, L; Mao, X; Qiu, H; Sun, G; Wang, J; Wang, Y; Zhang, Z1
Cao, Y; Fan, G; Gu, Z; Wang, Z1
Buckner, BA; Burckhardt, RM; Escalante-Semerena, JC1
Gao, Y; Kim, KT; Kwon, OK; Lee, H; Lee, S; Tan, M1
Chen, Z; Dai, J; Gao, K; Ge, T; Guo, M; He, Y; Hua, Y; Jin, J; Lu, H; Tian, B; Wang, L; Zhao, Y; Zhou, C1
Hsu, JB; Huang, KY; Lee, TY1
Liu, W; Sun, W; Wang, GL; Xiong, Y; Zhang, K1
Ali, HR; Ambardekar, AV; Cleveland, JC; Fritz, KS; Jeong, MY; Lin, YH; McKinsey, TA; Michel, CR; Reisdorph, N; Reisdorph, R; Woulfe, KC1
Bao, H; Gao, X; Liu, L; Yue, L; Zhang, L; Zhu, W1
Feng, L; He, Y; Hu, H; Huang, Z; Li, X; Liu, J; Ma, J; Mao, M; Rafique, F; Sun, L; Xue, Y; Yang, W; Zhou, X1
Chang, WC; Huang, KY; Kao, HJ; Lee, TY; Nguyen, VN1
Hu, J; Li, M; Li, X; Li, Y; Ling, T; Mu, X; Pan, J; Shen, J; Su, Z; Wang, C; Wen, H; Wen, J; You, Q; Zhang, C; Zhang, X; Zhao, T1
Cheng, H; Deng, W; Guo, Y; Jiang, P; Ning, W; Xu, H; Xue, Y1
Liu, G; Liu, M; Qin, X; Zhang, L1
Liu, G; Miao, S; Wang, J; Wang, P; Yang, L; Zhang, J1
Chen, C; Dong, Y; Li, P1
Fang, L; Ji, P; Li, W; Liu, L; Pu, J; Rao, X; Song, J; Wang, H; Wei, H; Xie, P; Yang, D; Yu, Y; Zhao, L; Zheng, P; Zhou, C1
Han, J; Wang, H; Yan, Z; Zhao, H; Zhao, J1
Guo, Z; Li, P; Long, F; Wu, J; Yang, Y; Zhang, H; Zhao, GP; Zhao, W; Zou, S1
Goetzman, E; Zhang, Y1
Dong, R; He, X; Li, F; Qiao, J; Wang, C; Wang, J; Xin, B; Xin, Z; Yang, H; Zeng, H1
Jia, J; Li, M; Qiu, W; Wu, G1
Han, D; Lu, K1
Fu, J; Han, Z; Ren, W; Wu, Z; Xia, Y; Yang, G; Yin, Y1
Ban, Q; Hou, YY; Huang, T; Ma, B; Shi, L; Zhang, ML; Zhang, Q; Zhou, YF1

Reviews

3 review(s) available for lysine and succinic acid

ArticleYear
Large-Scale Assessment of Bioinformatics Tools for Lysine Succinylation Sites.
    Cells, 2019, 01-28, Volume: 8, Issue:2

    Topics: Algorithms; Amino Acid Sequence; Animals; Computational Biology; Databases, Protein; Humans; Lysine; Species Specificity; Succinic Acid

2019
The growing landscape of succinylation links metabolism and heart disease.
    Epigenomics, 2021, Volume: 13, Issue:4

    Topics: Animals; Heart Diseases; Humans; Lysine; Protein Processing, Post-Translational; Succinic Acid

2021
A review of the mechanism of succinylation in cancer.
    Medicine, 2022, Nov-11, Volume: 101, Issue:45

    Topics: Humans; Lysine; Neoplasms; Protein Processing, Post-Translational; Signal Transduction; Succinic Acid

2022

Other Studies

78 other study(ies) available for lysine and succinic acid

ArticleYear
Development of a phospholipidosis database and predictive quantitative structure-activity relationship (QSAR) models.
    Toxicology mechanisms and methods, 2008, Volume: 18, Issue:2-3

    Topics:

2008
X-ray studies on crystalline complexes involving amino acids and peptides. XXIII. Variability in ionization state, conformation and molecular aggregation in the complexes of succinic acid with DL- and L-lysine.
    Acta crystallographica. Section B, Structural science, 1991, Dec-01, Volume: 47 ( Pt 6)

    Topics: Amino Acids; Ions; Lysine; Peptides; Protein Conformation; Succinates; Succinic Acid; Temperature; X-Ray Diffraction

1991
Influence of pH adjustment agents on the biologic behavior of osmium-191 impurity in iridium-191m generator eluates.
    Journal of nuclear medicine : official publication, Society of Nuclear Medicine, 1990, Volume: 31, Issue:4

    Topics: Animals; Buffers; Hydrogen-Ion Concentration; Iridium; Isotopes; Lysine; Mice; Mice, Inbred ICR; Osmium; Phosphates; Radioisotopes; Radionuclide Generators; Sodium Hydroxide; Succinates; Succinic Acid; Tissue Distribution

1990
A new relaxed mutant of Bacillus subtilis.
    Journal of bacteriology, 1982, Volume: 149, Issue:2

    Topics: Amino Acids; Bacillus subtilis; Chromosome Mapping; Chromosomes, Bacterial; Genes, Bacterial; Glucose; Guanine Nucleotides; Guanosine Pentaphosphate; Guanosine Tetraphosphate; Lysine; Mutation; RNA, Bacterial; Succinates; Succinic Acid

1982
The participation of primary amino groups of succinate dehydrogenase in the formation of succinate-Q reductase.
    Biochimica et biophysica acta, 1981, Sep-14, Volume: 637, Issue:2

    Topics: Alkylation; Carrier Proteins; Electron Transport Complex II; Fluorescamine; Lysine; Multienzyme Complexes; Oxidoreductases; Protein Conformation; Spectrometry, Fluorescence; Succinate Dehydrogenase; Succinates; Succinic Acid; Ubiquinone

1981
Charged residues in surface-located loops influence voltage gating of porin from Haemophilus influenzae type b.
    The Journal of membrane biology, 2000, Dec-01, Volume: 178, Issue:3

    Topics: Amino Acid Sequence; Cell Membrane Permeability; Electric Conductivity; Haemophilus influenzae; Ion Channel Gating; Lipid Bilayers; Lysine; Models, Molecular; Molecular Sequence Data; Molecular Weight; Peptide Mapping; Porins; Protein Conformation; Protein Structure, Tertiary; Spectrometry, Mass, Electrospray Ionization; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Structure-Activity Relationship; Succinic Acid

2000
Disease-related metabolites in culture medium of fibroblasts from patients with D-2-hydroxyglutaric aciduria, L-2-hydroxyglutaric aciduria, and combined D/L-2-hydroxyglutaric aciduria.
    Clinical chemistry, 2003, Volume: 49, Issue:7

    Topics: Biomarkers; Cell Line; Culture Media; Fibroblasts; Gas Chromatography-Mass Spectrometry; Glutamic Acid; Glutamine; Glutarates; Humans; Ketoglutaric Acids; Lysine; Metabolic Diseases; Stereoisomerism; Succinic Acid

2003
[Presence of homarine, taurocyamine, choline, lysine and other amino acids, also of succinic acid, in the marine snail, Arenicola marina].
    Hoppe-Seyler's Zeitschrift fur physiologische Chemie, 1955, Nov-25, Volume: 302, Issue:2-3

    Topics: Amino Acids; Animals; Choline; Helix, Snails; Lysine; Picolinic Acids; Snails; Succinates; Succinic Acid; Taurine

1955
Interactions between beta D372 and gamma subunit N-terminus residues gamma K9 and gamma S12 are important to catalytic activity catalyzed by Escherichia coli F1F0-ATP synthase.
    Biochemistry, 2005, May-17, Volume: 44, Issue:19

    Topics: Acridine Orange; Animals; Aspartic Acid; Catalysis; Cattle; Culture Media; Escherichia coli; Escherichia coli Proteins; Glucose; Kinetics; Lysine; Mitochondrial Proton-Translocating ATPases; Mutagenesis, Site-Directed; Peptide Fragments; Protein Structure, Secondary; Protein Subunits; Proton Pumps; Serine; Spectrometry, Fluorescence; Succinic Acid; Thermodynamics

2005
Oxygen limitation is a pitfall during screening for industrial strains.
    Applied microbiology and biotechnology, 2006, Volume: 72, Issue:6

    Topics: Acetic Acid; Biomass; Bioreactors; Corynebacterium glutamicum; Densitometry; Industrial Microbiology; Lactic Acid; Lysine; Oxygen Consumption; Statistics as Topic; Succinic Acid

2006
Sodium-dependent extracellular accessibility of Lys-84 in the sodium/dicarboxylate cotransporter.
    The Journal of biological chemistry, 2007, Jul-13, Volume: 282, Issue:28

    Topics: Animals; Cell Line, Transformed; Cell Membrane; Citric Acid; Citric Acid Cycle; Epithelial Cells; Humans; Ion Transport; Lysine; Mesylates; Mutation, Missense; Organic Anion Transporters, Sodium-Dependent; Protein Structure, Secondary; Rabbits; Retina; Sodium; Substrate Specificity; Succinic Acid; Sulfhydryl Reagents

2007
Succination of protein thiols during adipocyte maturation: a biomarker of mitochondrial stress.
    The Journal of biological chemistry, 2007, Nov-23, Volume: 282, Issue:47

    Topics: 3T3 Cells; Adipocytes; Adipogenesis; Adipose Tissue; Animals; Biomarkers; Cell Differentiation; Citric Acid Cycle; Cysteine; Diabetes Complications; Diabetes Mellitus, Type 2; Fibroblasts; Fumarates; Humans; Insulin Resistance; Lysine; Mice; Mitochondria; Obesity; Protein Processing, Post-Translational; Risk Factors; Stress, Physiological; Succinic Acid; Sulfhydryl Compounds

2007
Unfolding diminishes fluorescence resonance energy transfer (FRET) of lysine modified β-lactoglobulin: Relevance towards anti-HIV binding.
    Journal of photochemistry and photobiology. B, Biology, 2011, Jan-10, Volume: 102, Issue:1

    Topics: Acetylation; Anilino Naphthalenesulfonates; Animals; Anti-HIV Agents; Cattle; Fluorescence Resonance Energy Transfer; HIV; Hydrophobic and Hydrophilic Interactions; Lactoglobulins; Ligands; Lysine; Protein Binding; Protein Unfolding; Static Electricity; Succinic Acid

2011
Identification of lysine succinylation as a new post-translational modification.
    Nature chemical biology, 2011, Volume: 7, Issue:1

    Topics: Acyl Coenzyme A; Amino Acid Sequence; Blotting, Western; Chromatography, High Pressure Liquid; Escherichia coli Proteins; Lysine; Mass Spectrometry; Molecular Sequence Data; Peptides; Protein Processing, Post-Translational; Sequence Alignment; Succinic Acid

2011
Sirt5 is a NAD-dependent protein lysine demalonylase and desuccinylase.
    Science (New York, N.Y.), 2011, Nov-11, Volume: 334, Issue:6057

    Topics: Acetylation; Animals; Carbamoyl-Phosphate Synthase (Ammonia); Cattle; Crystallography, X-Ray; Histones; Humans; Hydrogen Bonding; Hydrophobic and Hydrophilic Interactions; Kinetics; Lysine; Male; Mice; Mice, Knockout; Mitochondria, Liver; NAD; Peptides; Protein Processing, Post-Translational; Sirtuins; Succinic Acid

2011
GC/TOFMS analysis of metabolites in serum and urine reveals metabolic perturbation of TCA cycle in db/db mice involved in diabetic nephropathy.
    American journal of physiology. Renal physiology, 2013, Jun-01, Volume: 304, Issue:11

    Topics: 3-Hydroxybutyric Acid; Albuminuria; Allantoin; Amino Acids; Animals; Arachidonic Acid; Biomarkers; Cholesterol; Citric Acid; Citric Acid Cycle; Diabetic Nephropathies; Gas Chromatography-Mass Spectrometry; Glycolysis; Hydrogen-Ion Concentration; Lipid Metabolism; Lysine; Malates; Male; Metabolomics; Mice; Mice, Inbred C57BL; Succinic Acid; Urine

2013
Changes in the Acetylome and Succinylome of Bacillus subtilis in Response to Carbon Source.
    PloS one, 2015, Volume: 10, Issue:6

    Topics: Acetyl Coenzyme A; Acetylation; Acyl Coenzyme A; Amino Acids, Branched-Chain; Bacillus subtilis; Blotting, Western; Carbon; Citric Acid; Gene Expression Regulation, Bacterial; Lysine; Mass Spectrometry; Metabolic Networks and Pathways; Proteomics; Purines; Succinic Acid

2015
Global Analysis of Protein Lysine Succinylation Profiles and Their Overlap with Lysine Acetylation in the Marine Bacterium Vibrio parahemolyticus.
    Journal of proteome research, 2015, Oct-02, Volume: 14, Issue:10

    Topics: Acetylation; Amino Acid Motifs; Aquatic Organisms; Bacterial Proteins; Chromatography, Liquid; Lysine; Molecular Sequence Annotation; Molecular Sequence Data; Protein Biosynthesis; Protein Processing, Post-Translational; Proteome; Succinic Acid; Tandem Mass Spectrometry; Vibrio parahaemolyticus

2015
Characterization of the cardiac succinylome and its role in ischemia-reperfusion injury.
    Journal of molecular and cellular cardiology, 2015, Volume: 88

    Topics: Adenine Nucleotide Translocator 1; Animals; Electron Transport Chain Complex Proteins; Fatty Acids; Female; Gene Expression Regulation; Lysine; Male; Malonates; Metabolic Networks and Pathways; Mice; Mice, Inbred C57BL; Mice, Knockout; Mitochondria, Heart; Molecular Sequence Annotation; Myocardial Reperfusion Injury; Myocardium; Protein Processing, Post-Translational; Sirtuin 1; Succinate Dehydrogenase; Succinic Acid

2015
Global Proteome Analyses of Lysine Acetylation and Succinylation Reveal the Widespread Involvement of both Modification in Metabolism in the Embryo of Germinating Rice Seed.
    Journal of proteome research, 2016, Mar-04, Volume: 15, Issue:3

    Topics: Acetylation; Amino Acid Motifs; Amino Acid Sequence; Gene Ontology; Germination; Lysine; Metabolic Networks and Pathways; Oryza; Plant Proteins; Protein Interaction Maps; Protein Processing, Post-Translational; Proteome; Seedlings; Seeds; Succinic Acid

2016
pSuc-Lys: Predict lysine succinylation sites in proteins with PseAAC and ensemble random forest approach.
    Journal of theoretical biology, 2016, Apr-07, Volume: 394

    Topics: Algorithms; Databases, Protein; Lysine; Proteins; Reproducibility of Results; Software; Succinic Acid

2016
Statistical Correlations between NMR Spectroscopy and Direct Infusion FT-ICR Mass Spectrometry Aid Annotation of Unknowns in Metabolomics.
    Analytical chemistry, 2016, Mar-01, Volume: 88, Issue:5

    Topics: Animals; Lysine; Magnetic Resonance Spectroscopy; Mass Spectrometry; Metabolomics; Oligochaeta; Serine; Statistics as Topic; Succinic Acid; Tissue Extracts

2016
Proteome-Wide Identification of Lysine Succinylation in the Proteins of Tomato (Solanum lycopersicum).
    PloS one, 2016, Volume: 11, Issue:2

    Topics: Amino Acid Motifs; Amino Acid Sequence; Chromatography, Liquid; Citric Acid Cycle; Gene Ontology; Histones; Lysine; Molecular Sequence Data; Peptides; Plant Proteins; Protein Transport; Proteome; Solanum lycopersicum; Species Specificity; Subcellular Fractions; Succinic Acid; Tandem Mass Spectrometry

2016
Quantitative Analysis of the Sirt5-Regulated Lysine Succinylation Proteome in Mammalian Cells.
    Methods in molecular biology (Clifton, N.J.), 2016, Volume: 1410

    Topics: Animals; Cells, Cultured; Lysine; Mass Spectrometry; Mice; Mice, Knockout; Protein Processing, Post-Translational; Proteome; Sirtuins; Succinic Acid

2016
Succinyl-proteome profiling of a high taxol containing hybrid Taxus species (Taxus × media) revealed involvement of succinylation in multiple metabolic pathways.
    Scientific reports, 2016, Feb-23, Volume: 6

    Topics: Amino Acid Sequence; Antibodies; Antineoplastic Agents, Phytogenic; Blotting, Western; Carbon Cycle; Chromatography, Liquid; Citric Acid Cycle; Gene Expression Regulation, Plant; Glycolysis; Lysine; Molecular Sequence Annotation; Paclitaxel; Plant Proteins; Protein Interaction Mapping; Protein Processing, Post-Translational; Proteome; Pyruvic Acid; Succinic Acid; Tandem Mass Spectrometry; Taxus

2016
Proteome-wide Lysine Glutarylation Profiling of the Mycobacterium tuberculosis H37Rv.
    Journal of proteome research, 2016, Apr-01, Volume: 15, Issue:4

    Topics: Acetylation; Acyltransferases; Amino Acid Sequence; Antigens, Bacterial; Bacterial Proteins; Chromatography, Liquid; Escherichia coli; Escherichia coli Proteins; Gene Expression; Gene Expression Profiling; Glutarates; Lysine; Mass Spectrometry; Mycobacterium tuberculosis; Peptide Elongation Factor Tu; Protein Processing, Post-Translational; Proteome; Ribosomal Proteins; Succinic Acid

2016
Acetylation and succinylation contribute to maturational alterations in energy metabolism in the newborn heart.
    American journal of physiology. Heart and circulatory physiology, 2016, 08-01, Volume: 311, Issue:2

    Topics: 3-Hydroxyacyl CoA Dehydrogenases; Acetylation; Acyl-CoA Dehydrogenase, Long-Chain; Adenosine Triphosphate; Animals; Animals, Newborn; Cell Line; Energy Metabolism; Fatty Acids; Fetal Heart; Glycolysis; Hexokinase; Hypoxia-Inducible Factor 1, alpha Subunit; Immunoblotting; Immunoprecipitation; In Vitro Techniques; Lysine; Mitochondria, Heart; Mitochondrial Proteins; Myocardium; Nerve Tissue Proteins; Oxidation-Reduction; Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alpha; Phosphoglycerate Mutase; Protein Processing, Post-Translational; Rabbits; Rats; Succinic Acid

2016
Lysine Acetylation and Succinylation in HeLa Cells and their Essential Roles in Response to UV-induced Stress.
    Scientific reports, 2016, 07-25, Volume: 6

    Topics: Acetylation; Cell Line, Tumor; DNA Damage; Genomic Instability; HeLa Cells; Humans; Lysine; Protein Processing, Post-Translational; Stress, Physiological; Succinic Acid; Ultraviolet Rays

2016
First Comprehensive Proteome Analyses of Lysine Acetylation and Succinylation in Seedling Leaves of Brachypodium distachyon L.
    Scientific reports, 2016, 08-12, Volume: 6

    Topics: Acetylation; Brachypodium; Lysine; Plant Leaves; Plant Proteins; Protein Processing, Post-Translational; Seedlings; Succinic Acid

2016
Systematic Analysis of the Lysine Succinylome in Candida albicans.
    Journal of proteome research, 2016, 10-07, Volume: 15, Issue:10

    Topics: Acetylation; Candida albicans; Citric Acid Cycle; Computational Biology; Fungal Proteins; Lysine; Protein Processing, Post-Translational; Proteome; Proteomics; Succinic Acid

2016
Proteome-wide identification of lysine succinylation in thermophilic and mesophilic bacteria.
    Biochimica et biophysica acta. Proteins and proteomics, 2017, Volume: 1865, Issue:2

    Topics: Acetylation; Acylation; Bacillus subtilis; Bacterial Proteins; Escherichia coli; Geobacillus; Lysine; Protein Processing, Post-Translational; Proteome; Rhodothermus; Succinic Acid; Thermus thermophilus

2017
Mitochondrial control through nutritionally regulated global histone H3 lysine-4 demethylation.
    Scientific reports, 2016, 11-29, Volume: 6

    Topics: Demethylation; DNA Replication; Gene Expression Regulation, Fungal; Histones; Jumonji Domain-Containing Histone Demethylases; Ketoglutaric Acids; Lysine; Mitochondria; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Succinic Acid; Transcription, Genetic

2016
Proteomic analysis of lysine succinylation of the human pathogen Histoplasma capsulatum.
    Journal of proteomics, 2017, 02-10, Volume: 154

    Topics: Computational Biology; Fungal Proteins; Histones; Histoplasma; Humans; Lysine; Metabolic Networks and Pathways; Protein Biosynthesis; Protein Processing, Post-Translational; Proteomics; Succinic Acid; Tandem Mass Spectrometry

2017
Quantitative global proteome and lysine succinylome analyses provide insights into metabolic regulation and lymph node metastasis in gastric cancer.
    Scientific reports, 2017, 02-06, Volume: 7

    Topics: Aged; Antigens; Biomarkers, Tumor; Calmodulin-Binding Proteins; Citric Acid Cycle; Female; Humans; Lymphatic Metastasis; Lysine; Male; Middle Aged; Proteome; RNA, Long Noncoding; Stomach Neoplasms; Succinic Acid

2017
A scalable lysyl hydroxylase 2 expression system and luciferase-based enzymatic activity assay.
    Archives of biochemistry and biophysics, 2017, 03-15, Volume: 618

    Topics: Animals; Carbon; Carbon Dioxide; CHO Cells; Chromatography, Liquid; Collagen; Cricetulus; Culture Media, Conditioned; Glycosylation; Humans; Ketoglutaric Acids; Luciferases; Lysine; Procollagen-Lysine, 2-Oxoglutarate 5-Dioxygenase; Recombinant Proteins; Succinic Acid; Tandem Mass Spectrometry

2017
SucStruct: Prediction of succinylated lysine residues by using structural properties of amino acids.
    Analytical biochemistry, 2017, 06-15, Volume: 527

    Topics: Algorithms; Amino Acid Sequence; Amino Acids; Animals; Humans; Lysine; Models, Statistical; Protein Processing, Post-Translational; Proteome; Rodentia; Succinic Acid

2017
Global analysis of protein lysine succinylation profiles in common wheat.
    BMC genomics, 2017, 04-20, Volume: 18, Issue:1

    Topics: Acetylation; Carbon Cycle; Lysine; Molecular Sequence Annotation; Photosynthesis; Plant Proteins; Protein Processing, Post-Translational; Protein Structure, Secondary; Protein Transport; Proteomics; Succinic Acid; Triticum

2017
pSuc-PseRat: Predicting Lysine Succinylation in Proteins by Exploiting the Ratios of Sequence Coupling and Properties.
    Journal of computational biology : a journal of computational molecular cell biology, 2017, Volume: 24, Issue:10

    Topics: Algorithms; Computational Biology; Databases, Protein; Humans; Lysine; Protein Processing, Post-Translational; Proteins; Proteome; Software; Succinic Acid

2017
A systematic identification of species-specific protein succinylation sites using joint element features information.
    International journal of nanomedicine, 2017, Volume: 12

    Topics: Computational Biology; Computer Simulation; Databases, Protein; Lysine; Protein Processing, Post-Translational; Proteins; Software; Species Specificity; Succinic Acid

2017
Effect of lysine succinylation on the regulation of 2-oxoglutarate dehydrogenase inhibitor, OdhI, involved in glutamate production in Corynebacterium glutamicum.
    Bioscience, biotechnology, and biochemistry, 2017, Volume: 81, Issue:11

    Topics: Amino Acid Sequence; Corynebacterium glutamicum; Enzyme Inhibitors; Glutamic Acid; Ketoglutarate Dehydrogenase Complex; Lysine; Models, Molecular; Mutation; Phosphorylation; Protein Domains; Protein Processing, Post-Translational; Succinic Acid

2017
Oxidative stress-triggered interactions between the succinyl- and acetyl-proteomes of rice leaves.
    Plant, cell & environment, 2018, Volume: 41, Issue:5

    Topics: Acetylation; Aminoacylation; Chromatography, Liquid; Gene Expression Regulation, Plant; Lysine; Mass Spectrometry; Oryza; Oxidative Stress; Photosynthesis; Plant Leaves; Plant Proteins; Protein Processing, Post-Translational; Proteome; Succinic Acid

2018
Systematic identification of mitochondrial lysine succinylome in silkworm (Bombyx mori) midgut during the larval gluttonous stage.
    Journal of proteomics, 2018, 03-01, Volume: 174

    Topics: Animals; Bombyx; Digestive System; Larva; Lysine; Mitochondria; Mitochondrial Proteins; Protein Processing, Post-Translational; Proteomics; Succinic Acid

2018
Proteome-wide lysine acetylation identification in developing rice (Oryza sativa) seeds and protein co-modification by acetylation, succinylation, ubiquitination, and phosphorylation.
    Biochimica et biophysica acta. Proteins and proteomics, 2018, Volume: 1866, Issue:3

    Topics: Acetylation; Amino Acid Sequence; Biosynthetic Pathways; Lysine; Oryza; Peptides; Phosphorylation; Plant Proteins; Protein Processing, Post-Translational; Proteome; Proteomics; Seeds; Starch; Succinic Acid; Tandem Mass Spectrometry; Ubiquitination

2018
Success: evolutionary and structural properties of amino acids prove effective for succinylation site prediction.
    BMC genomics, 2018, 01-19, Volume: 19, Issue:Suppl 1

    Topics: Algorithms; Amino Acid Sequence; Amino Acids; Computational Biology; Evolution, Molecular; Lysine; Protein Processing, Post-Translational; Succinic Acid

2018
Identification of the YEATS domain of GAS41 as a pH-dependent reader of histone succinylation.
    Proceedings of the National Academy of Sciences of the United States of America, 2018, 03-06, Volume: 115, Issue:10

    Topics: Crystallography; HeLa Cells; Histidine; Histone Acetyltransferases; Histones; Humans; Lysine; Models, Molecular; Protein Domains; Protein Processing, Post-Translational; Saccharomyces cerevisiae Proteins; Succinic Acid; Transcription Factors

2018
Site-Specific Systematic Analysis of Lysine Modification Crosstalk.
    Proteomics, 2018, Volume: 18, Issue:9

    Topics: Acetylation; Databases, Protein; Humans; Lysine; Protein Processing, Post-Translational; Proteins; Succinic Acid; Sumoylation

2018
Lysine Succinylation and Acetylation in Pseudomonas aeruginosa.
    Journal of proteome research, 2018, 07-06, Volume: 17, Issue:7

    Topics: Acetylation; Bacterial Proteins; Citric Acid; Lysine; Protein Processing, Post-Translational; Proteomics; Pseudomonas aeruginosa; Succinic Acid

2018
Quantitative Global Proteome and Lysine Succinylome Analyses Reveal the Effects of Energy Metabolism in Renal Cell Carcinoma.
    Proteomics, 2018, Volume: 18, Issue:19

    Topics: Biomarkers, Tumor; Carcinoma, Renal Cell; Energy Metabolism; Humans; Kidney; Kidney Neoplasms; Lysine; Protein Processing, Post-Translational; Proteome; Succinic Acid

2018
A case of extensive protein platination: the reaction of lysozyme with a Pt(ii)-terpyridine complex.
    Dalton transactions (Cambridge, England : 2003), 2018, Jul-03, Volume: 47, Issue:26

    Topics: Crystallography, X-Ray; Dimethyl Sulfoxide; Hydrogen-Ion Concentration; Ligands; Lysine; Molecular Conformation; Muramidase; Organoplatinum Compounds; Piperidines; Platinum; Protein Binding; Pyridines; Spectrometry, Mass, Electrospray Ionization; Succinic Acid; Water

2018
Quantitative proteome and lysine succinylome analyses provide insights into metabolic regulation in breast cancer.
    Breast cancer (Tokyo, Japan), 2019, Volume: 26, Issue:1

    Topics: Breast; Breast Neoplasms; Chromatography, High Pressure Liquid; Computational Biology; Disease Progression; Female; Humans; Lysine; Middle Aged; Protein Processing, Post-Translational; Proteome; Proteomics; Succinic Acid; Tandem Mass Spectrometry

2019
Simultaneous Quantification of the Acetylome and Succinylome by 'One-Pot' Affinity Enrichment.
    Proteomics, 2018, Volume: 18, Issue:17

    Topics: Acetylation; Animals; Chromatography, Affinity; Lysine; Mice; Mitochondria, Liver; Mitochondrial Proteins; Protein Processing, Post-Translational; Proteome; Succinic Acid; Tandem Mass Spectrometry

2018
Systematic Identification and Analysis of Lysine Succinylation in Strawberry Stigmata.
    Journal of agricultural and food chemistry, 2018, Dec-19, Volume: 66, Issue:50

    Topics: Fragaria; Fruit; Lysine; Plant Proteins; Protein Processing, Post-Translational; Proteome; Proteomics; Succinic Acid

2018
GPSuc: Global Prediction of Generic and Species-specific Succinylation Sites by aggregating multiple sequence features.
    PloS one, 2018, Volume: 13, Issue:10

    Topics: Algorithms; Animals; Area Under Curve; Computational Biology; Humans; Logistic Models; Lysine; Protein Processing, Post-Translational; Proteomics; Regression Analysis; ROC Curve; Species Specificity; Succinic Acid

2018
Dynamic changes in lysine acetylation and succinylation of the elongation factor Tu in Bacillus subtilis.
    Microbiology (Reading, England), 2019, Volume: 165, Issue:1

    Topics: Acetylation; Acetyltransferases; Acyl Coenzyme A; Amino Acid Motifs; Bacillus subtilis; Bacterial Proteins; Gene Expression Regulation, Bacterial; Lysine; Peptide Elongation Factor Tu; Succinic Acid

2019
Modified insoluble dietary fibers in okara affect body composition, serum metabolic properties, and fatty acid profiles in mice fed high-fat diets: an NMR investigation.
    Food research international (Ottawa, Ont.), 2019, Volume: 116

    Topics: Adipose Tissue; Alanine; Animals; Blood Glucose; Body Composition; Body Weight; Cholesterol; Choline; Citric Acid; Diet, High-Fat; Dietary Fiber; Fatty Acids; Fatty Acids, Omega-6; Glutamic Acid; Glycerylphosphorylcholine; Glycine max; Inositol; Lysine; Magnetic Resonance Spectroscopy; Male; Metabolomics; Mice; Mice, Inbred C57BL; Phosphatidylcholines; Succinic Acid; Triglycerides

2019
Succinyl-proteome profiling of Pyricularia oryzae, a devastating phytopathogenic fungus that causes rice blast disease.
    Scientific reports, 2019, 03-05, Volume: 9, Issue:1

    Topics: Chromatography, High Pressure Liquid; Citric Acid Cycle; Fungal Proteins; Lysine; Magnaporthe; Metabolic Networks and Pathways; Oryza; Peptides; Phylogeny; Plant Diseases; Protein Processing, Post-Translational; Proteome; Succinic Acid; Tandem Mass Spectrometry

2019
Phytoplasma-induced Changes in the Acetylome and Succinylome of
    Molecular & cellular proteomics : MCP, 2019, Volume: 18, Issue:6

    Topics: Acetylation; Amino Acid Motifs; Chlorophyll; Lamiaceae; Lysine; Models, Biological; Molecular Sequence Annotation; Photosynthesis; Phytoplasma; Plant Diseases; Plant Proteins; Protein Interaction Maps; Protein Structure, Secondary; Proteome; Proteomics; Seedlings; Starch; Succinic Acid

2019
Staphylococcus aureus modulates the activity of acetyl-Coenzyme A synthetase (Acs) by sirtuin-dependent reversible lysine acetylation.
    Molecular microbiology, 2019, Volume: 112, Issue:2

    Topics: Acetate-CoA Ligase; Acetylation; Amino Acid Motifs; Bacterial Proteins; Lysine; Sirtuins; Staphylococcus aureus; Succinic Acid

2019
Global Proteomic Analysis of Lysine Succinylation in Zebrafish (
    Journal of proteome research, 2019, 10-04, Volume: 18, Issue:10

    Topics: Animals; Chromatography, Liquid; Computational Biology; Databases, Protein; Immunoprecipitation; Lysine; Protein Processing, Post-Translational; Proteomics; Succinic Acid; Tandem Mass Spectrometry; Zebrafish

2019
Succinylome Analysis Reveals the Involvement of Lysine Succinylation in the Extreme Resistance of Deinococcus radiodurans.
    Proteomics, 2019, Volume: 19, Issue:20

    Topics: Amino Acid Sequence; Bacterial Proteins; Chromatography, Liquid; Deinococcus; Lysine; Protein Processing, Post-Translational; Proteomics; Succinic Acid; Tandem Mass Spectrometry

2019
Characterization and Identification of Lysine Succinylation Sites based on Deep Learning Method.
    Scientific reports, 2019, 11-07, Volume: 9, Issue:1

    Topics: Databases, Protein; Deep Learning; Lysine; Protein Processing, Post-Translational; Proteins; Sequence Analysis, Protein; Succinic Acid

2019
Global Proteomic Analysis Reveals Widespread Lysine Succinylation in Rice Seedlings.
    International journal of molecular sciences, 2019, Nov-25, Volume: 20, Issue:23

    Topics: Acetylation; Amino Acid Sequence; Lysine; Oryza; Plant Proteins; Protein Processing, Post-Translational; Proteome; Seedlings; Succinic Acid

2019
Defining decreased protein succinylation of failing human cardiac myofibrils in ischemic cardiomyopathy.
    Journal of molecular and cellular cardiology, 2020, Volume: 138

    Topics: Acylation; Cardiomyopathies; Heart Failure; Humans; Lysine; Methylation; Middle Aged; Mitochondrial Proteins; Myocardial Ischemia; Myocardium; Myofibrils; Proteomics; Reproducibility of Results; Succinic Acid; Tissue Donors

2020
Systematic analysis of lysine acetylome and succinylome reveals the correlation between modification of H2A.X complexes and DNA damage response in breast cancer.
    Oncology reports, 2020, Volume: 43, Issue:6

    Topics: Acetylation; Adult; Breast Neoplasms; Carcinoma, Ductal, Breast; Case-Control Studies; Cell Line, Tumor; Cell Survival; DNA Damage; Female; Gene Expression Regulation, Neoplastic; Histones; Humans; Lysine; MCF-7 Cells; Middle Aged; Nuclear Proteins; Nucleophosmin; Proteomics; Succinic Acid; Up-Regulation

2020
Systematic identification and comparative analysis of lysine succinylation between the green and white parts of chimeric leaves of Ananas comosus var. bracteatus.
    BMC genomics, 2020, Jun-03, Volume: 21, Issue:1

    Topics: Ananas; Chimera; Chromatography, Liquid; Color; Gene Expression Regulation, Plant; Glycolysis; Lysine; Photosynthesis; Plant Leaves; Plant Proteins; Protein Processing, Post-Translational; Proteomics; Succinic Acid; Tandem Mass Spectrometry

2020
SuccSite: Incorporating Amino Acid Composition and Informative k-spaced Amino Acid Pairs to Identify Protein Succinylation Sites.
    Genomics, proteomics & bioinformatics, 2020, Volume: 18, Issue:2

    Topics: Amino Acid Sequence; Amino Acids; Databases, Protein; Dipeptides; Humans; Lysine; Machine Learning; Proteins; ROC Curve; Substrate Specificity; Succinic Acid; Support Vector Machine

2020
Lysine-222 succinylation reduces lysosomal degradation of lactate dehydrogenase a and is increased in gastric cancer.
    Journal of experimental & clinical cancer research : CR, 2020, Aug-28, Volume: 39, Issue:1

    Topics: Animals; Apoptosis; Biomarkers, Tumor; Carnitine O-Palmitoyltransferase; Cell Proliferation; Female; Gene Expression Regulation, Enzymologic; Gene Expression Regulation, Neoplastic; Humans; L-Lactate Dehydrogenase; Lung Neoplasms; Lysine; Lysosomes; Male; Melanoma; Mice; Mice, Nude; Middle Aged; Prognosis; Protein Processing, Post-Translational; Proteolysis; Sequestosome-1 Protein; Stomach Neoplasms; Succinic Acid; Survival Rate; Tumor Cells, Cultured; Xenograft Model Antitumor Assays

2020
HybridSucc: A Hybrid-learning Architecture for General and Species-specific Succinylation Site Prediction.
    Genomics, proteomics & bioinformatics, 2020, Volume: 18, Issue:2

    Topics: Acylation; Algorithms; Amino Acid Sequence; Area Under Curve; Humans; Lysine; Machine Learning; Neoplasms; Proteins; Proteome; ROC Curve; Species Specificity; Succinic Acid

2020
Succinylation Site Prediction Based on Protein Sequences Using the IFS-LightGBM (BO) Model.
    Computational and mathematical methods in medicine, 2020, Volume: 2020

    Topics: Algorithms; Amino Acid Sequence; Animals; Bayes Theorem; Binding Sites; Computational Biology; Databases, Protein; Humans; Lysine; Machine Learning; Models, Biological; Models, Chemical; Position-Specific Scoring Matrices; Protein Processing, Post-Translational; Proteins; Succinic Acid

2020
First comprehensive analysis of lysine succinylation in paper mulberry (Broussonetia papyrifera).
    BMC genomics, 2021, Apr-10, Volume: 22, Issue:1

    Topics: Broussonetia; China; Lysine; Morus; Protein Processing, Post-Translational; Proteomics; Succinic Acid

2021
Comprehensive analysis of the lysine acetylome and succinylome in the hippocampus of gut microbiota-dysbiosis mice.
    Journal of advanced research, 2021, Volume: 30

    Topics: Acetylation; Animals; Chromatography, High Pressure Liquid; Depression; Depressive Disorder, Major; Dysbiosis; Fecal Microbiota Transplantation; Gastrointestinal Microbiome; Gene-Environment Interaction; Hippocampus; Humans; Lysine; Male; Mice; Protein Processing, Post-Translational; Proteome; Succinic Acid; Tandem Mass Spectrometry

2021
MDCAN-Lys: A Model for Predicting Succinylation Sites Based on Multilane Dense Convolutional Attention Network.
    Biomolecules, 2021, 06-11, Volume: 11, Issue:6

    Topics: Algorithms; Amino Acid Sequence; Amino Acids; Animals; Computational Biology; Databases, Protein; Forecasting; Humans; Lysine; Machine Learning; Protein Processing, Post-Translational; Proteins; Succinic Acid

2021
Global Insights Into Lysine Acylomes Reveal Crosstalk Between Lysine Acetylation and Succinylation in Streptomyces coelicolor Metabolic Pathways.
    Molecular & cellular proteomics : MCP, 2021, Volume: 20

    Topics: Acetylation; Bacterial Proteins; Lysine; Metabolic Networks and Pathways; Protein Interaction Maps; Protein Processing, Post-Translational; Proteome; Sirtuins; Streptomyces coelicolor; Succinic Acid

2021
The enzyme activity of mitochondrial trifunctional protein is not altered by lysine acetylation or lysine succinylation.
    PloS one, 2021, Volume: 16, Issue:10

    Topics: Acetylation; Animals; Energy Metabolism; Fatty Acids; Liposomes; Liver; Lysine; Mice; Mice, Knockout; Mitochondria; Mitochondrial Trifunctional Protein, alpha Subunit; Myocardium; Protein Processing, Post-Translational; Sirtuin 3; Sirtuins; Succinic Acid

2021
Transcriptome analysis revealing molecular mechanisms of enhanced pigment yield by succinic acid and fluconazole.
    Preparative biochemistry & biotechnology, 2022, Volume: 52, Issue:9

    Topics: Acetyl Coenzyme A; Amino Acids, Branched-Chain; Fatty Acids; Fluconazole; Gene Expression Profiling; Lysine; Nitrogen; Pyruvates; RNA, Messenger; Succinic Acid

2022
pSuc-EDBAM: Predicting lysine succinylation sites in proteins based on ensemble dense blocks and an attention module.
    BMC bioinformatics, 2022, Oct-31, Volume: 23, Issue:1

    Topics: Amino Acid Sequence; Attention; Computational Biology; Lysine; Protein Processing, Post-Translational; Proteins; Succinic Acid

2022
GABA regulates IL-1β production in macrophages.
    Cell reports, 2022, 12-06, Volume: 41, Issue:10

    Topics: Animals; gamma-Aminobutyric Acid; Lysine; Macrophages; Mice; Mitochondrial Proteins; Succinic Acid

2022
Metabolomics profiling of seminal plasma in obesity-induced asthenozoospermia.
    Andrology, 2023, Volume: 11, Issue:7

    Topics: Aconitic Acid; Alanine; Asthenozoospermia; Citrulline; Glucose; Glutamic Acid; Glycine; Humans; Leucine; Lysine; Male; Metabolomics; Phenylalanine; Proline; Semen; Serine; Succinic Acid; Threonine; Tyrosine; Valine

2023