Compounds > lysine
Page last updated: 2024-08-17

lysine and cytochrome c-t

lysine has been researched along with cytochrome c-t in 99 studies

Research

Studies (99)

TimeframeStudies, this research(%)All Research%
pre-19908 (8.08)18.7374
1990's11 (11.11)18.2507
2000's40 (40.40)29.6817
2010's30 (30.30)24.3611
2020's10 (10.10)2.80

Authors

AuthorsStudies
Bergman, LW; Cessay, KJ; Tuck, MT1
Cohen, RE; Sokolik, CW1
Hickey, DR; McLendon, G; Sherman, F1
Conklin, KT; Hickey, DR; Holzschu, D; McLendon, G; Principio, L; Rao, R; Sherman, F; Short, J1
Davies, HC; Millett, FS; Nava, ME; Smith, HT; Smith, L1
Butler, J; Chapman, SK; Davies, DM; Margoliash, E; Osheroff, N; Speck, SH; Sykes, AG1
Augustin, MA; Chapman, SK; Davies, DM; Margoliash, E; Speck, SH; Sykes, AG1
Bocieck, S; Boswell, AP; Harris, DE; Moore, GR; Wallace, CJ; Welti, D; Williams, RJ1
Corin, AF; Hake, RA; Hazzard, JT; McLendon, G; Tollin, G1
Barker, PD; Eltis, LD; Guillemette, JG; Inglis, SC; Mauk, AG; Miller, CM; Northrup, SH; Thomasson, KA1
Sherman, F; Takakura, H; Yamamoto, T1
Dumont, ME; Mauk, AG; Pollock, WB; Rosell, FI; Twitchett, MB1
Barker, PD; Bujons, J; Cox, MC; Crowe, D; Mauk, AG; Mauk, MR; Moore, GR; Osborne, MJ; Rosell, FI1
Crnogorac, MM; Ejdebäck, M; Hansson, O; Ivković-Jensen, MM; Kostić, NM; Ullmann, GM; Young, S1
Becker, B; Dubois, E; el Alami, M; Feller, A; Piérard, A1
Matsuura, K; Miki, K; Nagashima, KV; Osyczka, A; Shimada, K; Sogabe, S; Yoshida, M1
Bowler, BE; Godbole, S1
Das, B; Martzen, MR; Phizicky, EM; Polevoda, B; Sherman, F1
Bredesen, D; Ellerby, HM; Ellerby, LM; Kluck, RM; Margoliash, E; Mauk, AG; Naiem, S; Newmeyer, DD; Sherman, F; Yaffe, MP1
Bujons, J; Hoffman, BM; Leesch, VW; Mauk, AG1
Becker, GW; Butler, JP; Hale, JE; Knierman, MD1
Pielak, GJ; Wang, X1
Iijima, K; Jung, SK; Murakawa, M; Yonehara, S1
Blouin, C; Guillemette, JG; Wallace, CJ1
Bowler, BE; Smith, CR; Wandschneider, E1
DRABKIN, DL; MARSH, JB1
FINE, AS; MORA, PT; PERSON, P; ZIPPER, H1
Bae, YS; Han, KH; Jun, DY; Kim, YH; Lee, YS; Rue, SW; Taub, D1
Brdiczka, D; Heimlich, G; Jürgensmeier, J; Schreiner, D; Vyssokikh, M; Zorov, D; Zorova, L1
Arie, S; Funasaki, N; Hirota, S; Okumura, H; Shionoya, M; Takabe, T; Tanaka, K; Watanabe, Y1
Bowler, BE; Martinez, RE1
Barnes, S; Coward, L; Darley-Usmar, V; Isom, AL; Kirk, M; Wilson, L1
Arous, S; Chauhan-Haubrock, R; Gravesen, A; Hastings, JW; Héchard, Y; Rautenbach, M; Vadyvaloo, V1
Imabayashi, S; Kakiuchi, T; Mita, T1
Blüggel, M; Chamrad, DC; Marcus, K; Meyer, HE; Reidegeld, KA; Schaefer, H1
Lenhoff, AM; Yao, Y1
Allen, JW; Ferguson, SJ; Leach, N1
Choi, YB; Hong, KM; Kim, KS; Ko, MH; Paik, MK; Park, DE; Shin, CH1
Carmona-Ribeiro, AM; Di Mascio, P; Kawai, C; Nantes, IL; Nunes, GL; Prado, FM1
Berezovsky, IN; Chen, WW; Choi, PJ; Shakhnovich, EI1
Baddam, S; Bowler, BE1
Ascoli, F; Caroppi, P; Howes, BD; Mei, G; Piro, MC; Santucci, R; Sinibaldi, F; Smulevich, G1
Piehler, J; Renner, C; Schrader, T1
Barnes, S; Darley-Usmar, VM; Giles, NM; Isom, A; Kirk, M; Landar, A; Oh, JY1
Bowden, EF; Xu, J1
de Vries, S; Dekker, C; Heering, HA; Williams, KA1
Ayres, M; Bratton, SB; Chandra, D; Fearnhead, HO; Gandhi, V; Martin, AG; Person, MD; Tang, DG; Tian, Y1
Battistuzzi, G; Borsari, M; De Rienzo, F; Di Rocco, G; Ranieri, A; Sola, M1
Christensen, O; Ferguson, SJ; Harvat, EM; Stevens, JM; Thöny-Meyer, L1
Jakubowski, H; Kaján, L; Marczak, Ł; Perła-Kaján, J; Skowronek, P; Twardowski, T1
Back, JW; de Jong, L; de Koning, LJ; de Koster, CG; Hartog, AF; Kasper, PT; Muijsers, AO; Roseboom, W; van Maarseveen, JH; Vitale, M1
Di Mascio, P; Medeiros, MH; Sigolo, CA1
Battistuzzi, G; Borsari, M; Bortolotti, CA; Di Rocco, G; Ranieri, A; Sola, M1
Baddam, S; Bandi, S; Bowler, BE1
Baba, Y; Goto, M; Oshima, T; Shimojo, K1
Aynechi, T; Bandyopadhyay, P; Fujii, N; Gibson, BW; Guo, X; Guy, RK; Kuntz, ID; Schilling, B; Young, MM1
Arseniev, AS; Bocharova, OV; Chernyak, BV; Chertkova, RV; Dolgikh, DA; Feofanov, AV; Kirpichnikov, MP; Latypov, RF; Sharonov, GV1
Götz, F; Herbert, S; Khosravi, A; Kraus, D; Kristian, SA; Nizet, V; Peschel, A1
Carmona-Ribeiro, AM; Castro, L; Di Mascio, P; Kawai, C; Milícchio, VA; Mugnol, KC; Nantes, IL; Pessoto, FS; Radi, R; Rodrigues, T; Tersariol, IL; Tórtora, V1
Codina, R; Jemmerson, R; Kelekar, A; Vanasse, A; Vezys, V1
Baba, Y; Oshima, T; Suetsugu, A1
Gulbins, E; Leanza, L; Soddemann, M; Szabò, I; Zoratti, M1
Hung, A; Kuna, JJ; Mager, M; Mwenifumbo, S; Stellacci, F; Stevens, MM; Yarovsky, I1
Clement, MH; Gralla, EB; Longo, VD; Martins, J; Sehati, S; Valentine, JS; Xu, L1
Bratton, SB; Chapman, JD; Fisher, AA; Labenski, MT; Lau, SS; Malladi, S; Monks, TJ1
Downey, MC; Gersten, RA; Gretebeck, LM; Hildick-Smith, GJ; Sandwick, RK1
De La Rosa, MÁ; Díaz-Moreno, I; García-Heredia, JM; Hildebrandt, P; Ly, HK; Utesch, T1
Dantas, JM; Londer, YY; Morgado, L; Pokkuluri, PR; Salgueiro, CA; Simões, T1
Bowler, BE; Khan, MK1
Bowler, BE; Cherney, MM; Junior, CC1
Coletta, M; Di Pierro, D; Droghetti, E; Fiorucci, L; Howes, BD; Piro, MC; Polticelli, F; Santucci, R; Sinibaldi, F; Smulevich, G1
Appolinário, PP; Bloch, C; Di Mascio, P; Genaro-Mattos, TC; Miyamoto, S; Mugnol, KC; Nantes, IL1
Delgado, Y; Griebenow, K; Hernández-Román, J; Martínez, Y; Morales-Cruz, M1
Bohre, A; De, S; Kumar, T; Saha, B; Singh, LR1
Abeygunawardena, D; Erce, MA; Hart-Smith, G; Wilkins, MR; Winter, DL1
Bandi, S; Bowler, BE; Cherney, MM; Culbertson, JE; Khan, MK; McClelland, LJ; Seagraves, SM1
Dibrova, DV; Galperin, MY; Mulkidjanian, AY; Shalaeva, DN1
Alden, SL; Amacher, JF; Hoke, KR; Lisi, GP; Madden, DR; Pletneva, EV; Zhong, F; Zhu, MQ1
He, T; Wang, JW; Zhou, JQ1
Alleyne, T; Ashe, D; Ignacio, DN; Sampson, VB; Wilson, M1
Gu, J; Pletneva, EV; Shin, DW1
Bowler, BE; Lei, H; Mou, TC; Nold, SM1
Bowe, GJK; Choi, S; Durfee, ND; Fica-Contreras, SM; Henning, NJ; Hill, SA; Sandwick, RK; Shuster, SO; Stillman, DR; Suralik, KM; Vrla, GD1
Bowler, BE; Briknarova, K; Danielson, TA; Dar, TA; Stine, JM1
Chapagain, PP; Tiwari, PB; Üren, A1
Bowler, BE; Elmer-Dixon, MM1
Crowley, PB; Engilberge, S; Rennie, ML1
Rai, V; Reddy, NC; Singudas, R1
Cai, W; Chang, J; Chen, X; Jiang, Y; Liang, C; Mao, L; Tang, Q; Wang, M1
Chandra, D; Gogada, R; Gundampati, RK; Hashmi, S; Jayanthi, S; Kumar, R; Lella, R; O'Malley, J; Suresh Kumar, TK; Wang, J; Yadav, N; Zhang, D1
Battistuzzi, G; Bellei, M; Borsari, M; Bortolotti, CA; Di Rocco, G; Paltrinieri, L; Paradisi, A; Ranieri, A; Sola, M1
Konermann, L; Yin, V1
Hamzink, MRJ; Jiskoot, W; Kersten, GFA; Meiring, HD; Metz, B; Michiels, TJM; Schöneich, C1
Antonenko, YN; Chertkova, RV; Dolgikh, DA; Firsov, AM; Gusev, ID; Kirpichnikov, MP; Kotova, EA1
Bazylianska, V; Brunzelle, JS; Chowdhury, DD; Edwards, BFP; Heath, EI; Hüttemann, M; Kalpage, HA; Kim, K; Lee, I; Mahapatra, G; Marcus, K; Morse, PT; Podgorski, I; Polin, L; Subedi, P; Turner, AA; Vaishnav, A; Wan, J1
Andreu, R; Calvente, JJ; De la Rosa, MA; Díaz-Moreno, I; Guerra-Castellano, A; Márquez, I; Olloqui-Sariego, JL; Pérez-Mejías, G1
Carretero, G; Coutinho, JAP; Feitosa, VA; Meneguetti, GP; Rangel-Yagui, CO; Santos, JHPM; Ventura, SPM1
Arranz, R; Ayala, I; Bernardo-García, N; Casado-Combreras, MÁ; De la Rosa, MA; Díaz-Moreno, I; Díaz-Quintana, A; Elena-Real, CA; Gavilán, MP; Gil-Caballero, S; González-Arzola, K; Hermoso, JA; Martínez-Fábregas, J; Ríos, RM; Rivero-Rodríguez, F; Salvatella, X; Szulc, E; Valpuesta, JM; Velázquez-Campoy, A; Velázquez-Cruz, A1
Arroum, T; Brunzelle, JS; Chowdhury, DD; De la Rosa, MA; Díaz-Moreno, I; Edwards, BFP; Huettemann, PP; Hüttemann, M; Kalpage, HA; Kim, K; Lee, I; Malek, MH; Márquez, I; Meierhofer, D; Morse, PT; Pérez-Mejías, G; Sanderson, TH; Turner, AA; Vaishnav, A; Wan, J; Zurek, MP1

Reviews

1 review(s) available for lysine and cytochrome c-t

ArticleYear
Recognition of lysine residues on protein surfaces using calixarenes and its application.
    Current drug discovery technologies, 2007, Volume: 4, Issue:4

    Topics: Calixarenes; Catalysis; Cytochromes c; Lysine; Oxidation-Reduction; Protein Conformation; Proteins

2007

Other Studies

98 other study(ies) available for lysine and cytochrome c-t

ArticleYear
Further investigations regarding the role of trimethyllysine for cytochrome c uptake into mitochondria.
    The International journal of biochemistry, 1991, Volume: 23, Issue:7-8

    Topics: Animals; Arginine; Base Sequence; Cloning, Molecular; Codon; Cytochrome c Group; Cytochromes c; Lysine; Methylation; Mitochondria; Mitochondria, Liver; Molecular Sequence Data; Mutagenesis, Site-Directed; Polymerase Chain Reaction; Protein Biosynthesis; Rats; Restriction Mapping; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Structure-Activity Relationship; Transcription, Genetic

1991
The structures of ubiquitin conjugates of yeast Iso-2-cytochrome c.
    The Journal of biological chemistry, 1991, May-15, Volume: 266, Issue:14

    Topics: Adenosine Triphosphate; Amino Acid Sequence; Animals; Cyanogen Bromide; Cytochrome c Group; Cytochromes c; In Vitro Techniques; Lysine; Molecular Sequence Data; Molecular Weight; Peptide Fragments; Peptide Mapping; Rabbits; Reticulocytes; Saccharomyces cerevisiae; Ubiquitins

1991
Thermodynamic stabilities of yeast iso-1-cytochromes c having amino acid substitutions for lysine 32.
    The Journal of biological chemistry, 1988, Dec-05, Volume: 263, Issue:34

    Topics: Cytochrome c Group; Cytochromes c; Enzyme Stability; Guanidine; Guanidines; Kinetics; Lysine; Protein Denaturation; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Spectrophotometry; Thermodynamics

1988
Replacement of the invariant lysine 77 by arginine in yeast iso-1-cytochrome c results in enhanced and normal activities in vitro and in vivo.
    The Journal of biological chemistry, 1987, May-25, Volume: 262, Issue:15

    Topics: Amino Acid Sequence; Arginine; Circular Dichroism; Codon; Cytochrome c Group; Cytochrome-c Peroxidase; Cytochromes c; DNA, Fungal; Electron Transport Complex IV; L-Lactate Dehydrogenase; L-Lactate Dehydrogenase (Cytochrome); Lysine; Mutation; Plasmids; Protein Conformation; Protein Denaturation; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Structure-Activity Relationship; Transformation, Genetic

1987
The reaction of the trifluoromethylphenylcarbamylated lysine-13 derivative of horse cytochrome c with cytochrome oxidase.
    Biochimica et biophysica acta, 1982, Jan-18, Volume: 700, Issue:2

    Topics: Animals; Cattle; Cytochrome c Group; Cytochromes c; Electron Transport Complex IV; Horses; Hydrogen-Ion Concentration; Kinetics; Lysine; Mitochondria, Heart; Submitochondrial Particles

1982
Preferred sites for electron transfer between cytochrome c and iron and cobalt complexes.
    The Journal of biological chemistry, 1983, May-25, Volume: 258, Issue:10

    Topics: Chemical Phenomena; Chemistry; Cobalt; Cytochrome c Group; Cytochromes c; Electrochemistry; Electron Transport; Ferricyanides; Kinetics; Lysine; Organometallic Compounds; Phenanthrolines; Structure-Activity Relationship

1983
Interaction of cytochrome c with the blue copper proteins, plastocyanin and azurin.
    The Journal of biological chemistry, 1983, May-25, Volume: 258, Issue:10

    Topics: Azurin; Bacterial Proteins; Cytochrome c Group; Cytochromes c; Electrochemistry; Kinetics; Lysine; Plant Proteins; Plastocyanin; Structure-Activity Relationship

1983
Ionization of tyrosine and lysine residues in native and modified horse cytochrome c.
    The Biochemical journal, 1983, Sep-01, Volume: 213, Issue:3

    Topics: Animals; Carbon Radioisotopes; Cytochrome c Group; Cytochromes c; Horses; Hydrogen-Ion Concentration; Lysine; Magnetic Resonance Spectroscopy; Protein Conformation; Temperature; Tritium; Tyrosine

1983
Effects of surface amino acid replacements in cytochrome c peroxidase on intracomplex electron transfer from cytochrome c.
    Biochemistry, 1993, Mar-23, Volume: 32, Issue:11

    Topics: Amino Acid Sequence; Cytochrome c Group; Cytochrome-c Peroxidase; Cytochromes c; Electron Transport; Hydrogen-Ion Concentration; Kinetics; Lysine; Photolysis; Recombinant Proteins; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins

1993
Effects of charged amino acid mutations on the bimolecular kinetics of reduction of yeast iso-1-ferricytochrome c by bovine ferrocytochrome b5.
    Biochemistry, 1993, Jul-06, Volume: 32, Issue:26

    Topics: Amino Acid Sequence; Animals; Binding Sites; Cattle; Cytochrome c Group; Cytochromes b5; Cytochromes c; Heme; Histidine; Kinetics; Liver; Lysine; Mutagenesis, Site-Directed; Oxidation-Reduction; Protein Conformation; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins

1993
Sequence requirement for trimethylation of yeast cytochrome c.
    Biochemistry, 1997, Mar-04, Volume: 36, Issue:9

    Topics: Amino Acid Sequence; Cytochrome c Group; Cytochromes c; Lysine; Methylation; Molecular Sequence Data; Mutagenesis, Site-Directed; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins

1997
Bacterial expression of a mitochondrial cytochrome c. Trimethylation of lys72 in yeast iso-1-cytochrome c and the alkaline conformational transition.
    Biochemistry, 1998, Apr-28, Volume: 37, Issue:17

    Topics: Alkalies; Bacterial Proteins; Cytochrome c Group; Cytochromes c; Electrochemistry; Electron Spin Resonance Spectroscopy; Escherichia coli; Lyases; Lysine; Magnetic Resonance Spectroscopy; Mass Spectrometry; Methylation; Mitochondria; Protein Conformation; Recombinant Proteins; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Spectrophotometry, Ultraviolet

1998
N epsilon,N epsilon-dimethyl-lysine cytochrome c as an NMR probe for lysine involvement in protein-protein complex formation.
    The Biochemical journal, 1998, Jun-01, Volume: 332 ( Pt 2)

    Topics: Animals; Cattle; Cytochrome c Group; Cytochrome-c Peroxidase; Cytochromes b5; Cytochromes c; Electron Transport; Fungal Proteins; Horses; Hydrogen-Ion Concentration; Kinetics; Liver; Lysine; Magnetic Resonance Spectroscopy; Molecular Probes; Oxidation-Reduction; Protein Binding; Saccharomyces cerevisiae Proteins

1998
Effects of single and double mutations in plastocyanin on the rate constant and activation parameters for the rearrangement gating the electron-transfer reaction between the triplet state of zinc cytochrome c and cupriplastocyanin.
    Biochemistry, 1998, Jun-30, Volume: 37, Issue:26

    Topics: Animals; Copper; Cytochrome c Group; Cytochromes c; Electron Transport; Enzyme Activation; Glutamic Acid; Glutamine; Horses; Kinetics; Lysine; Models, Molecular; Mutagenesis, Site-Directed; Photolysis; Plastocyanin; Spectrophotometry; Spinacia oleracea; Temperature; Viscosity; Zinc

1998
A nonameric core sequence is required upstream of the LYS genes of Saccharomyces cerevisiae for Lys14p-mediated activation and apparent repression by lysine.
    Molecular microbiology, 1998, Volume: 29, Issue:1

    Topics: Artificial Gene Fusion; Base Sequence; Cytochrome c Group; Cytochromes c; DNA-Binding Proteins; DNA, Fungal; Escherichia coli; Gene Expression Regulation, Fungal; Genes, Fungal; Lac Operon; Lysine; Molecular Sequence Data; Promoter Regions, Genetic; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Sequence Analysis, DNA; Trans-Activators

1998
Interaction site for soluble cytochromes on the tetraheme cytochrome subunit bound to the bacterial photosynthetic reaction center mapped by site-directed mutagenesis.
    Biochemistry, 1998, Aug-25, Volume: 37, Issue:34

    Topics: Amino Acid Substitution; Bacterial Proteins; Binding Sites; Cytochromes; Cytochromes c; Electron Transport; Glutamic Acid; Heme; Light-Harvesting Protein Complexes; Lysine; Models, Molecular; Mutagenesis, Site-Directed; Photosynthetic Reaction Center Complex Proteins; Protein Binding; Rhodospirillaceae; Solubility; Spectrophotometry; Static Electricity

1998
Effect of pH on formation of a nativelike intermediate on the unfolding pathway of a Lys 73 --> His variant of yeast iso-1-cytochrome c.
    Biochemistry, 1999, Jan-05, Volume: 38, Issue:1

    Topics: Amino Acid Substitution; Cytochrome c Group; Cytochromes c; Guanidine; Histidine; Hydrogen-Ion Concentration; Lysine; Mutagenesis, Site-Directed; Protein Denaturation; Protein Folding; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Spectrophotometry

1999
Cytochrome c methyltransferase, Ctm1p, of yeast.
    The Journal of biological chemistry, 2000, Jul-07, Volume: 275, Issue:27

    Topics: Amino Acid Sequence; Amino Acids; Apoproteins; Base Sequence; Cell Fractionation; Cytochrome c Group; Cytochromes c; Cytosol; Fungal Proteins; Histone-Lysine N-Methyltransferase; Lysine; Methylation; Molecular Sequence Data; Mutation; RNA, Messenger; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Sequence Alignment; Spectrophotometry

2000
Determinants of cytochrome c pro-apoptotic activity. The role of lysine 72 trimethylation.
    The Journal of biological chemistry, 2000, May-26, Volume: 275, Issue:21

    Topics: Amino Acid Sequence; Animals; Apoptosis; Cytochrome c Group; Cytochromes c; Horses; Lysine; Methylation; Mitochondria; Models, Molecular; Molecular Sequence Data; Oocytes; Peptide Hydrolases; Protein Isoforms; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Sequence Homology, Amino Acid; Xenopus

2000
Cytochrome c peroxidase-cytochrome c complex: locating the second binding domain on cytochrome c peroxidase with site-directed mutagenesis.
    Biochemistry, 2000, Aug-22, Volume: 39, Issue:33

    Topics: Animals; Aspartic Acid; Binding Sites; Calorimetry; Cytochrome c Group; Cytochrome-c Peroxidase; Cytochromes c; Glutamic Acid; Horses; Kinetics; Lysine; Models, Chemical; Models, Molecular; Mutagenesis, Site-Directed; Zinc

2000
Increased sensitivity of tryptic peptide detection by MALDI-TOF mass spectrometry is achieved by conversion of lysine to homoarginine.
    Analytical biochemistry, 2000, Dec-01, Volume: 287, Issue:1

    Topics: Amino Acid Sequence; Animals; Apoproteins; Cattle; Cytochrome c Group; Cytochromes c; Homoarginine; Lysine; Methylurea Compounds; Peptide Mapping; Peptides; Sequence Analysis; Serum Albumin, Bovine; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

2000
Interactions between yeast iso-1-cytochrome c and its peroxidase.
    Biochemistry, 2001, Jan-16, Volume: 40, Issue:2

    Topics: Alanine; Amino Acid Substitution; Aspartic Acid; Binding Sites; Calorimetry; Crystallography, X-Ray; Cytochrome c Group; Cytochrome-c Peroxidase; Cytochromes c; Glutamic Acid; Lysine; Macromolecular Substances; Mutagenesis, Site-Directed; Recombinant Proteins; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Solutions; Thermodynamics; Valine

2001
Apoptosis-inducing protein, AIP, from parasite-infected fish induces apoptosis in mammalian cells by two different molecular mechanisms.
    Cell death and differentiation, 2001, Volume: 8, Issue:3

    Topics: Animals; Anisakiasis; Anisakis; Apoptosis; Apoptosis Regulatory Proteins; Blotting, Western; Caspase 3; Caspase 9; Caspases; Cell Line, Tumor; Cytochromes c; Enzyme Activation; Fish Diseases; HL-60 Cells; Humans; Hydrogen Peroxide; Lysine; Mitochondria; Perciformes; Proto-Oncogene Proteins c-bcl-2; Recombinant Proteins

2001
Resolving the individual components of a pH-induced conformational change.
    Biophysical journal, 2001, Volume: 81, Issue:4

    Topics: Animals; Arginine; Colon, Sigmoid; Cytochrome c Group; Cytochromes c; Horses; Hydrogen-Ion Concentration; Iron; Isomerism; Kinetics; Lysine; Methionine; Mitochondria; Mutagenesis, Site-Directed; Protein Conformation; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Titrimetry

2001
Effect of pH on the iso-1-cytochrome c denatured state: changing constraints due to heme ligation.
    Biochemistry, 2003, Feb-25, Volume: 42, Issue:7

    Topics: Acetylation; Amino Acid Substitution; Binding, Competitive; Cytochrome c Group; Cytochromes c; Genetic Variation; Guanidine; Heme; Histidine; Hydrogen-Ion Concentration; Ligands; Lysine; Mutagenesis, Site-Directed; Protein Conformation; Protein Denaturation; Protein Structure, Tertiary; Saccharomyces cerevisiae Proteins; Spectrometry, Fluorescence; Tryptophan

2003
The biosynthesis of cytochrome c in vivo and in vitro.
    The Journal of biological chemistry, 1957, Volume: 224, Issue:2

    Topics: Cytochromes; Cytochromes c; Glycine; In Vitro Techniques; Lysine

1957
MACROION INTERACTIONS INVOLVING COMPONENTS OF THE CYTOCHROME SYSTEM. IV. POLYION-INDUCED REVERSIBLE OXIDATIONS AND REDUCTIONS OF CYTOCHROME C.
    The Journal of biological chemistry, 1965, Volume: 240

    Topics: Aspartic Acid; Chemical Phenomena; Chemistry; Cytochromes; Cytochromes c; Glucose; Glutamates; Heparin; Ions; Lysine; Oxidation-Reduction; Peptides; Polysaccharides; Research; Sulfates

1965
Mechanism underlying cytotoxicity of thialysine, lysine analog, toward human acute leukemia Jurkat T cells.
    Biochemical pharmacology, 2003, Dec-15, Volume: 66, Issue:12

    Topics: Apoptosis; bcl-X Protein; Caspases; Cell Cycle; Cell Survival; Cysteine; Cytochromes c; Enzyme Activation; Humans; Jurkat Cells; Leukemia; Lysine; Mitochondria; Protein Synthesis Inhibitors; Proto-Oncogene Proteins c-bcl-2; Tumor Cells, Cultured

2003
The intra-mitochondrial cytochrome c distribution varies correlated to the formation of a complex between VDAC and the adenine nucleotide translocase: this affects Bax-dependent cytochrome c release.
    Biochimica et biophysica acta, 2004, Feb-02, Volume: 1644, Issue:1

    Topics: Animals; bcl-2-Associated X Protein; Binding Sites; Bongkrekic Acid; Cytochromes c; Hexokinase; In Vitro Techniques; Intracellular Membranes; Kidney; Lysine; Mitochondria; Mitochondrial ADP, ATP Translocases; Osmotic Pressure; Porins; Proto-Oncogene Proteins; Proto-Oncogene Proteins c-bcl-2; Rats; Rats, Wistar; Voltage-Dependent Anion Channels

2004
Interaction of plastocyanin with oligopeptides: effect of lysine distribution within the peptide.
    Journal of inorganic biochemistry, 2004, Volume: 98, Issue:5

    Topics: Amino Acid Sequence; Binding Sites; Cytochromes c; Electron Transport; In Vitro Techniques; Lysine; Models, Molecular; Oligopeptides; Plastocyanin; Protein Conformation; Silene; Spectrophotometry

2004
Proton-mediated dynamics of the alkaline conformational transition of yeast iso-1-cytochrome c.
    Journal of the American Chemical Society, 2004, Jun-02, Volume: 126, Issue:21

    Topics: Amino Acid Substitution; Cytochromes c; Histidine; Hydrogen-Ion Concentration; Isoenzymes; Kinetics; Lysine; Methionine; Protein Conformation; Protons; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Spectrophotometry

2004
Modification of Cytochrome c by 4-hydroxy- 2-nonenal: evidence for histidine, lysine, and arginine-aldehyde adducts.
    Journal of the American Society for Mass Spectrometry, 2004, Volume: 15, Issue:8

    Topics: Aldehydes; Amino Acid Sequence; Amino Acids; Animals; Arginine; Cross-Linking Reagents; Cytochromes c; Histidine; Horses; Lysine; Molecular Sequence Data; Myocardium; Peptide Mapping; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

2004
Cell-surface alterations in class IIa bacteriocin-resistant Listeria monocytogenes strains.
    Microbiology (Reading, England), 2004, Volume: 150, Issue:Pt 9

    Topics: Alanine; Anti-Bacterial Agents; Bacteriocins; Cell Membrane; Cycloserine; Cytochromes c; Drug Resistance, Bacterial; Gene Expression Regulation, Bacterial; Listeria monocytogenes; Lysine; Mutation; Peptidoglycan; Phosphatidylglycerols; Phosphoenolpyruvate Sugar Phosphotransferase System; Phospholipids; RNA, Bacterial; RNA, Messenger; Teichoic Acids

2004
Effect of mono-CDNP substitution of lysine residues on the redox reaction of cytochrome c electrostatically adsorbed on a mercaptoheptanoic acid modified Au(111) surface.
    Langmuir : the ACS journal of surfaces and colloids, 2005, Mar-15, Volume: 21, Issue:6

    Topics: Adsorption; Animals; Cytochromes c; Electrochemistry; Electrodes; Gold; Heptanoic Acids; Horses; Lysine; Oxidation-Reduction; Static Electricity; Sulfhydryl Compounds; Thiones

2005
Tryptic transpeptidation products observed in proteome analysis by liquid chromatography-tandem mass spectrometry.
    Proteomics, 2005, Volume: 5, Issue:4

    Topics: Animals; Arginine; Chromatography, Liquid; Cytochromes c; Databases, Protein; Electrophoresis, Gel, Two-Dimensional; Lactoglobulins; Lens, Crystalline; Lysine; Mass Spectrometry; Mice; Mice, Inbred C57BL; Myoglobin; Peptide Mapping; Peptides; Protein Structure, Tertiary; Proteins; Proteome; Proteomics; Spectrometry, Mass, Electrospray Ionization; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Trypsin

2005
Electrostatic contributions to protein retention in ion-exchange chromatography. 2. Proteins with various degrees of structural differences.
    Analytical chemistry, 2005, Apr-01, Volume: 77, Issue:7

    Topics: Arginine; Cations; Chromatography, Ion Exchange; Cytochromes c; Fibroblast Growth Factor 1; Fibroblast Growth Factor 2; Lysine; Models, Chemical; Models, Molecular; Muramidase; Protein Conformation; Proteins; Static Electricity; Subtilisin

2005
The histidine of the c-type cytochrome CXXCH haem-binding motif is essential for haem attachment by the Escherichia coli cytochrome c maturation (Ccm) apparatus.
    The Biochemical journal, 2005, Jul-15, Volume: 389, Issue:Pt 2

    Topics: Amino Acid Substitution; Arginine; Binding Sites; Cytochrome b Group; Cytochromes c; Escherichia coli; Escherichia coli Proteins; Heme; Histidine; Lysine; Mutation; Protein Binding

2005
Increased lysine N-methylation of a 23-kDa protein during hepatic regeneration.
    Experimental & molecular medicine, 2005, Jun-30, Volume: 37, Issue:3

    Topics: Animals; Cytochromes c; DNA Helicases; Hepatectomy; Histone-Lysine N-Methyltransferase; Histones; Liver; Liver Regeneration; Lysine; Methylation; Proteins; Rats; Rats, Sprague-Dawley

2005
pH-Dependent interaction of cytochrome c with mitochondrial mimetic membranes: the role of an array of positively charged amino acids.
    The Journal of biological chemistry, 2005, Oct-14, Volume: 280, Issue:41

    Topics: Albumins; Amino Acids; Animals; Binding Sites; Carbon; Cardiolipins; Cytochromes c; Histidine; Horses; Hydrogen-Ion Concentration; Intracellular Membranes; Lysine; Lysophospholipids; Membrane Potentials; Mitochondria; Mitochondrial Membranes; Models, Biological; Models, Molecular; Myocardium; Phosphatidylethanolamines; Phosphorylcholine; Photons; Protamines; Spectrophotometry; Static Electricity

2005
Entropic stabilization of proteins and its proteomic consequences.
    PLoS computational biology, 2005, Volume: 1, Issue:4

    Topics: Aminopeptidases; Arginine; Computational Biology; Computer Simulation; Cytochromes c; Endopeptidases; Entropy; Enzyme Stability; Escherichia coli; Genome; Lysine; Monte Carlo Method; Mutation; Protein Folding; Proteome; Proteomics; Temperature; Thermus thermophilus

2005
Thermodynamics and kinetics of formation of the alkaline state of a Lys 79-->Ala/Lys 73-->His variant of iso-1-cytochrome c.
    Biochemistry, 2005, Nov-15, Volume: 44, Issue:45

    Topics: Alanine; Cytochromes c; Guanidine; Histidine; Hydrogen-Ion Concentration; Kinetics; Lysine; Mutagenesis, Site-Directed; Proline; Protein Denaturation; Saccharomyces cerevisiae Proteins; Static Electricity; Thermodynamics

2005
Insights into the role of the histidines in the structure and stability of cytochrome c.
    Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry, 2006, Volume: 11, Issue:1

    Topics: Circular Dichroism; Cytochromes c; Enzyme Stability; Escherichia coli; Fungal Proteins; Histidine; Hydrogen-Ion Concentration; Lysine; Mutagenesis, Site-Directed; Protein Conformation; Protein Denaturation; Spectrum Analysis, Raman

2006
Arginine- and lysine-specific polymers for protein recognition and immobilization.
    Journal of the American Chemical Society, 2006, Jan-18, Volume: 128, Issue:2

    Topics: Acrylamides; Arginine; Cytochromes c; Diphosphonates; Ferritins; Histones; Kinetics; Lysine; Models, Molecular; Muramidase; Peptides; Polylysine; Polymethacrylic Acids; Trypsin

2006
A sensitive method for the quantitative measurement of protein thiol modification in response to oxidative stress.
    Free radical biology & medicine, 2006, Feb-01, Volume: 40, Issue:3

    Topics: Animals; Biotinylation; Cytochromes c; Electrophoresis, Gel, Two-Dimensional; Heart; Horses; Iodoacetamide; Lysine; Oxidants; Oxidation-Reduction; Oxidative Stress; Protein Processing, Post-Translational; Proteomics; Sulfhydryl Compounds

2006
Determination of the orientation of adsorbed cytochrome C on carboxyalkanethiol self-assembled monolayers by in situ differential modification.
    Journal of the American Chemical Society, 2006, May-31, Volume: 128, Issue:21

    Topics: Amino Acid Sequence; Animals; Binding Sites; Biochemistry; Chromatography, Liquid; Cytochromes c; Electrodes; Gold; Horses; Lysine; Mass Spectrometry; Methylation; Models, Molecular; Molecular Sequence Data; Protein Conformation; Schiff Bases; Trypsin

2006
Specific vectorial immobilization of oligonucleotide-modified yeast cytochrome C on carbon nanotubes.
    Chemphyschem : a European journal of chemical physics and physical chemistry, 2006, Aug-11, Volume: 7, Issue:8

    Topics: Adsorption; Binding Sites; Biosensing Techniques; Cysteine; Cytochromes c; Detergents; Electrochemistry; Enzymes; Lysine; Microscopy, Atomic Force; Microscopy, Fluorescence; Nanotubes, Carbon; Oligonucleotides; Saccharomyces cerevisiae; Spectrophotometry

2006
Intracellular nucleotides act as critical prosurvival factors by binding to cytochrome C and inhibiting apoptosome.
    Cell, 2006, Jun-30, Volume: 125, Issue:7

    Topics: Apoptosis; Apoptotic Protease-Activating Factor 1; Binding Sites; Caspase 9; Caspases; Cell Line; Cell Survival; Cell-Free System; Cytochromes c; Enzyme Activation; Humans; In Vitro Techniques; Intracellular Signaling Peptides and Proteins; Lysine; Models, Molecular; Multiprotein Complexes; Nucleotides; Protein Conformation; Protein Structure, Quaternary; Proteins

2006
Free energy of transition for the individual alkaline conformers of yeast iso-1-cytochrome c.
    Biochemistry, 2007, Feb-13, Volume: 46, Issue:6

    Topics: Alanine; Amino Acid Sequence; Cytochromes c; Electrochemistry; Entropy; Genetic Variation; Hydrogen-Ion Concentration; Isoenzymes; Kinetics; Lysine; Protein Conformation; Saccharomyces cerevisiae Proteins; Thermodynamics

2007
Loss of ATP hydrolysis activity by CcmAB results in loss of c-type cytochrome synthesis and incomplete processing of CcmE.
    The FEBS journal, 2007, Volume: 274, Issue:9

    Topics: Adenosine Triphosphate; Amino Acid Motifs; Aspartic Acid; ATP-Binding Cassette Transporters; Bacterial Outer Membrane Proteins; Cytochromes c; Escherichia coli; Escherichia coli Proteins; Heme; Hemeproteins; Histidine; Hydrolysis; Lysine; Mutagenesis, Site-Directed; Protein Processing, Post-Translational; Protein Subunits; Sequence Deletion

2007
Modification by homocysteine thiolactone affects redox status of cytochrome C.
    Biochemistry, 2007, May-29, Volume: 46, Issue:21

    Topics: Animals; Binding Sites; Circular Dichroism; Cytochromes c; Homocysteine; Horses; Hyperhomocysteinemia; Lysine; Oxidation-Reduction; Protein Processing, Post-Translational; Protein Structure, Secondary

2007
An aptly positioned azido group in the spacer of a protein cross-linker for facile mapping of lysines in close proximity.
    Chembiochem : a European journal of chemical biology, 2007, Jul-23, Volume: 8, Issue:11

    Topics: Animals; Azides; Chromatography, High Pressure Liquid; Cross-Linking Reagents; Cytochromes c; Horses; Lysine; Molecular Sequence Data; Molecular Structure; Peptides; Phosphines; Spectrometry, Mass, Electrospray Ionization; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

2007
Covalent modification of cytochrome c exposed to trans,trans-2,4-decadienal.
    Chemical research in toxicology, 2007, Volume: 20, Issue:8

    Topics: Aldehydes; Amino Acid Sequence; Cardiolipins; Cytochromes c; Electron Transport Complex IV; Histidine; Hydrogen-Ion Concentration; Lysine; Mitochondrial Membranes; Molecular Sequence Data; Molecular Weight; Oxidative Stress; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Time Factors

2007
Effects of mutational (Lys to Ala) surface charge changes on the redox properties of electrode-immobilized cytochrome c.
    The journal of physical chemistry. B, 2007, Aug-30, Volume: 111, Issue:34

    Topics: Alanine; Amino Acid Substitution; Cytochromes c; Electrodes; Enzymes, Immobilized; Kinetics; Lysine; Oxidation-Reduction; Protein Conformation; Saccharomyces cerevisiae Proteins; Surface Properties; Thermodynamics

2007
Alkaline conformational transition and gated electron transfer with a Lys 79 --> his variant of iso-1-cytochrome c.
    Biochemistry, 2007, Sep-18, Volume: 46, Issue:37

    Topics: Alkalies; Anaerobiosis; Cytochromes c; Electron Transport; Guanidine; Heme; Histidine; Hydrogen-Ion Concentration; Kinetics; Ligands; Lysine; Magnetic Resonance Spectroscopy; Mutant Proteins; Protein Conformation; Protein Denaturation; Protein Folding; Protein Structure, Secondary; Protons; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Thermodynamics

2007
Partial acetylation of lysine residues improves intraprotein cross-linking.
    Analytical chemistry, 2008, Feb-15, Volume: 80, Issue:4

    Topics: Acetates; Acetylation; Amino Acid Sequence; Chromatography, Liquid; Cross-Linking Reagents; Cytochromes c; Lysine; Molecular Sequence Data; Peptides; Protein Denaturation; Protein Folding; Protein Structure, Tertiary; Proteins; Ribonuclease, Pancreatic; Solvents; Succinimides; Tandem Mass Spectrometry

2008
Proapoptotic activity of cytochrome c in living cells: effect of K72 substitutions and species differences.
    Molecular and cellular biochemistry, 2008, Volume: 314, Issue:1-2

    Topics: Amino Acid Substitution; Animals; Apoptosis; Cell Survival; Cells, Cultured; Cytochromes c; Dose-Response Relationship, Drug; HL-60 Cells; Horses; Humans; K562 Cells; Lysine; Mice; Mutant Proteins; Species Specificity

2008
The GraRS regulatory system controls Staphylococcus aureus susceptibility to antimicrobial host defenses.
    BMC microbiology, 2008, Jun-02, Volume: 8

    Topics: Alanine; Animals; Antimicrobial Cationic Peptides; Cathelicidins; Cell Membrane; Cells, Cultured; Cytochromes c; Female; Gene Deletion; Genes, Bacterial; Genes, Regulator; Humans; Immunity, Innate; Kidney; Lysine; Mice; Mice, Inbred BALB C; Neutrophils; Operon; Phosphatidylglycerols; Staphylococcal Infections; Staphylococcus aureus; Teichoic Acids; Virulence

2008
pH-sensitive binding of cytochrome c to the inner mitochondrial membrane. Implications for the participation of the protein in cell respiration and apoptosis.
    Biochemistry, 2009, Sep-08, Volume: 48, Issue:35

    Topics: Animals; Apoptosis; Cytochromes c; Electron Transport; Horses; Hydrogen-Ion Concentration; Lysine; Mitochondria; Mitochondria, Heart; Mitochondria, Liver; Mitochondrial Membranes; Protein Binding; Protein Conformation; Structure-Activity Relationship; Tuna

2009
Cytochrome c-induced lymphocyte death from the outside in: inhibition by serum leucine-rich alpha-2-glycoprotein-1.
    Apoptosis : an international journal on programmed cell death, 2010, Volume: 15, Issue:2

    Topics: Amino Acid Sequence; Animals; Apoptotic Protease-Activating Factor 1; Binding, Competitive; Cell Death; Cell Survival; Cells, Cultured; Conserved Sequence; Cytochromes c; Evolution, Molecular; Flow Cytometry; Glycoproteins; Horses; Humans; Lymphocytes; Lysine; Mice; Models, Biological; Models, Molecular; Molecular Sequence Data; Phenotype; Protein Binding; Sequence Homology, Amino Acid; Species Specificity

2010
Extraction and separation of a lysine-rich protein by formation of supramolecule between crown ether and protein in aqueous two-phase system.
    Analytica chimica acta, 2010, Aug-03, Volume: 674, Issue:2

    Topics: Animals; Chemical Fractionation; Crown Ethers; Cytochromes c; Horses; Lithium Compounds; Lysine; Polyethylene Glycols; Sulfates; Water

2010
Single-point mutations of a lysine residue change function of Bax and Bcl-xL expressed in Bax- and Bak-less mouse embryonic fibroblasts: novel insights into the molecular mechanisms of Bax-induced apoptosis.
    Cell death and differentiation, 2011, Volume: 18, Issue:3

    Topics: Amino Acid Sequence; Animals; Apoptosis; bcl-2 Homologous Antagonist-Killer Protein; bcl-2-Associated X Protein; bcl-X Protein; Cytochromes c; Embryo, Mammalian; Fibroblasts; Humans; Ion Channel Gating; Jurkat Cells; Kv1.3 Potassium Channel; Lipid Bilayers; Lysine; Membrane Potential, Mitochondrial; Mice; Molecular Sequence Data; Mutant Proteins; Point Mutation; Protein Structure, Quaternary; Sequence Homology, Amino Acid

2011
Ordering surfaces on the nanoscale: implications for protein adsorption.
    Journal of the American Chemical Society, 2011, Feb-09, Volume: 133, Issue:5

    Topics: Adsorption; Cytochromes c; Enzyme Stability; Hydrogen Bonding; Hydrophobic and Hydrophilic Interactions; Lysine; Metal Nanoparticles; Molecular Dynamics Simulation; Protein Conformation; Surface Properties; Thermodynamics

2011
Metabolic alterations in yeast lacking copper-zinc superoxide dismutase.
    Free radical biology & medicine, 2011, Jun-01, Volume: 50, Issue:11

    Topics: Cell Growth Processes; Cell Respiration; Cytochromes c; Ethanol; Glucose; Lysine; Methionine; Mitochondria; Mutation; Oxidative Stress; Oxygen; Oxygen Consumption; Saccharomyces cerevisiae Proteins; Superoxide Dismutase; Yeasts

2011
The frequency of 1,4-benzoquinone-lysine adducts in cytochrome c correlate with defects in apoptosome activation.
    Toxicological sciences : an official journal of the Society of Toxicology, 2011, Volume: 122, Issue:1

    Topics: Animals; Apoptosomes; Benzoquinones; Caspase 3; Chromatography, Liquid; Circular Dichroism; Cytochromes c; DNA Adducts; Horses; Isoelectric Focusing; Lysine; Models, Molecular; Protein Conformation; Protein Processing, Post-Translational; Protein Structure, Quaternary; Tandem Mass Spectrometry

2011
Ribose 5-phosphate glycation reduces cytochrome c respiratory activity and membrane affinity.
    Biochemistry, 2011, Dec-27, Volume: 50, Issue:51

    Topics: Adenosine Triphosphate; Animals; Binding Sites; Cardiolipins; Cattle; Cytochromes c; Electron Transport; Electron Transport Complex IV; Fungal Proteins; Glycosylation; Liposomes; Lysine; Membrane Fusion; Mitochondrial Membranes; Nephelometry and Turbidimetry; Organelles; Oxidation-Reduction; Peptide Fragments; Ribosemonophosphates; Solubility

2011
Perturbation of the redox site structure of cytochrome c variants upon tyrosine nitration.
    The journal of physical chemistry. B, 2012, May-17, Volume: 116, Issue:19

    Topics: Cytochromes c; Fatty Acids; Heme; Humans; Iron; Kinetics; Lysine; Methionine; Mutation; Nitro Compounds; Oxidation-Reduction; Phenylalanine; Protein Stability; Protein Structure, Quaternary; Recombinant Proteins; Silver Compounds; Static Electricity; Sulfhydryl Compounds; Tyrosine; Water

2012
Role of Met(58) in the regulation of electron/proton transfer in trihaem cytochrome PpcA from Geobacter sulfurreducens.
    Bioscience reports, 2012, Nov-30, Volume: 33, Issue:1

    Topics: Bacterial Proteins; Cytochromes c; Electron Transport; Escherichia coli; Geobacter; Heme; Hydrogen-Ion Concentration; Lysine; Magnetic Resonance Spectroscopy; Methionine; Mutagenesis, Site-Directed; Oxidation-Reduction; Solutions; Thermodynamics

2012
Conformational properties of polyglutamine sequences in guanidine hydrochloride solutions.
    Biophysical journal, 2012, Nov-07, Volume: 103, Issue:9

    Topics: Alanine; Amino Acid Sequence; Cytochromes c; Guanidine; Heme; Histidine; Lysine; Molecular Sequence Data; Mutagenesis, Insertional; Peptides; Protein Denaturation; Protein Stability; Protein Structure, Tertiary

2012
Mutation of trimethyllysine 72 to alanine enhances His79-heme-mediated dynamics of iso-1-cytochrome c.
    Biochemistry, 2013, Feb-05, Volume: 52, Issue:5

    Topics: Alanine; Amino Acid Substitution; Cytochromes c; Heme; Hydrogen-Ion Concentration; Kinetics; Lysine; Models, Molecular; Protein Conformation; Protein Denaturation; Protein Stability; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Thermodynamics

2013
Role of lysines in cytochrome c-cardiolipin interaction.
    Biochemistry, 2013, Jul-02, Volume: 52, Issue:26

    Topics: Animals; Apoptosis; Cardiolipins; Cytochromes c; Horses; Humans; Lysine; Myocardium; Peroxidase; Protein Binding; Protein Interaction Maps; Protein Structure, Tertiary

2013
Covalent binding and anchoring of cytochrome c to mitochondrial mimetic membranes promoted by cholesterol carboxyaldehyde.
    Chemical research in toxicology, 2013, Oct-21, Volume: 26, Issue:10

    Topics: Aldehydes; Amino Acid Sequence; Animals; Apoptosis; Biomimetic Materials; Cattle; Cholesterol; Cytochromes c; Electron Transport; Light; Liposomes; Lysine; Mitochondria; Models, Molecular; Myocardium; Oxidation-Reduction; Peptides; Protein Binding; Protein Interaction Domains and Motifs; Trypsin

2013
Chemical glycosylation of cytochrome c improves physical and chemical protein stability.
    BMC biochemistry, 2014, Aug-06, Volume: 15

    Topics: Apoptosis; Biological Availability; Caspase 3; Caspase 9; Cell-Free System; Circular Dichroism; Cytochromes c; Dextrans; Glycosylation; Humans; Lactose; Lysine; Molecular Conformation; Protein Stability; Proteolysis

2014
Furan-based acetylating agent for the chemical modification of proteins.
    Bioorganic & medicinal chemistry, 2015, Feb-15, Volume: 23, Issue:4

    Topics: Acetylation; Animals; Cattle; Cytochromes c; Furans; Indicators and Reagents; Lysine; Models, Molecular; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

2015
Lysine methylation modulates the protein-protein interactions of yeast cytochrome C Cyc1p.
    Proteomics, 2015, Volume: 15, Issue:13

    Topics: Blotting, Western; Cytochromes c; Escherichia coli; Lysine; Mass Spectrometry; Methylation; Protein Binding; Two-Hybrid System Techniques

2015
The response of Ω-loop D dynamics to truncation of trimethyllysine 72 of yeast iso-1-cytochrome c depends on the nature of loop deformation.
    Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry, 2015, Volume: 20, Issue:5

    Topics: Cytochromes c; Hydrogen-Ion Concentration; Kinetics; Lysine; Models, Molecular; Saccharomyces cerevisiae; Sodium Chloride; Thermodynamics

2015
Modeling of interaction between cytochrome c and the WD domains of Apaf-1: bifurcated salt bridges underlying apoptosome assembly.
    Biology direct, 2015, May-27, Volume: 10

    Topics: Animals; Apoptosis; Apoptosomes; Apoptotic Protease-Activating Factor 1; Cytochromes c; Horses; Humans; Hydrogen Bonding; Lysine; Microscopy, Electron; Molecular Dynamics Simulation; Phylogeny; Protein Binding; Protein Interaction Mapping; Protein Structure, Secondary; Protein Structure, Tertiary; Salts; Static Electricity

2015
A Compact Structure of Cytochrome c Trapped in a Lysine-Ligated State: Loop Refolding and Functional Implications of a Conformational Switch.
    Journal of the American Chemical Society, 2015, Jul-08, Volume: 137, Issue:26

    Topics: Animals; Apoptosis; Cardiolipins; Crystallization; Cytochromes c; Electron Spin Resonance Spectroscopy; Fungal Proteins; Heme; Horses; Hydrogen Bonding; Ions; Iron; Ligands; Lysine; Oxidation-Reduction; Oxygen; Peroxidases; Protein Binding; Protein Folding; Protein Structure, Secondary; Saccharomyces cerevisiae; Spectrophotometry, Ultraviolet

2015
PEGylation of cytochrome c at the level of lysine residues mediated by a microbial transglutaminase.
    Biotechnology letters, 2016, Volume: 38, Issue:7

    Topics: Cytochromes c; Lysine; Molecular Structure; Polyethylene Glycols; Transglutaminases

2016
Simulating the slow to fast switch in cytochrome c oxidase catalysis by introducing a loop flip near the enzyme's cytochrome c (substrate) binding site.
    Biotechnology and applied biochemistry, 2017, Volume: 64, Issue:5

    Topics: Animals; Binding Sites; Cattle; Cytochromes c; Electron Transport Complex IV; Hydrogen Bonding; Lysine; Models, Molecular; Protein Conformation

2017
Remote Perturbations in Tertiary Contacts Trigger Ligation of Lysine to the Heme Iron in Cytochrome c.
    Biochemistry, 2017, 06-13, Volume: 56, Issue:23

    Topics: Amino Acid Substitution; Animals; Biocatalysis; Circular Dichroism; Cytochromes c; Electron Spin Resonance Spectroscopy; Electron Transport; Enzyme Stability; Heme; Horses; Hot Temperature; Hydrogen Bonding; Hydrogen-Ion Concentration; Ligands; Lysine; Models, Molecular; Nuclear Magnetic Resonance, Biomolecular; Oxidation-Reduction; Point Mutation; Protein Conformation; Protein Denaturation; Recombinant Proteins

2017
Effect of a K72A Mutation on the Structure, Stability, Dynamics, and Peroxidase Activity of Human Cytochrome c.
    Biochemistry, 2017, 07-05, Volume: 56, Issue:26

    Topics: Amino Acid Substitution; Biocatalysis; Catalytic Domain; Crystallography, X-Ray; Cytochromes c; Databases, Protein; Enzyme Stability; Humans; Hydrogen-Ion Concentration; Kinetics; Lysine; Models, Molecular; Mutagenesis, Site-Directed; Mutation; Peroxidases; Protein Conformation; Protein Unfolding; Recombinant Proteins; Saccharomyces cerevisiae Proteins; Structural Homology, Protein

2017
Glycation of Lys-16 and Arg-5 in amyloid-β and the presence of Cu
    Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry, 2017, Volume: 22, Issue:8

    Topics: Alzheimer Disease; Amino Acid Sequence; Amyloid beta-Peptides; Arginine; Copper; Cytochromes c; Deoxyguanine Nucleotides; DNA Damage; Glycosylation; Guanosine Monophosphate; Lysine; Models, Molecular; Oxidation-Reduction; Oxidative Stress; Protein Conformation

2017
Effect of an Imposed Contact on Secondary Structure in the Denatured State of Yeast Iso-1-cytochrome c.
    Biochemistry, 2017, 12-26, Volume: 56, Issue:51

    Topics: Cytochromes c; Guanidine; Histidine; Lysine; Mutation; Nuclear Magnetic Resonance, Biomolecular; Protein Denaturation; Protein Folding; Protein Structure, Secondary; Saccharomyces cerevisiae Proteins; Thermodynamics

2017
Investigating molecular interactions between oxidized neuroglobin and cytochrome c.
    Scientific reports, 2018, Jul-12, Volume: 8, Issue:1

    Topics: Apoptosis; Cytochromes c; Humans; Lysine; Molecular Dynamics Simulation; Neuroglobin; Oxidation-Reduction; Protein Binding; Protein Structure, Secondary; Surface Plasmon Resonance

2018
Electrostatic Constituents of the Interaction of Cardiolipin with Site A of Cytochrome c.
    Biochemistry, 2018, 10-02, Volume: 57, Issue:39

    Topics: Amino Acid Substitution; Cardiolipins; Cytochromes c; Fluorescence; Lysine; Protein Binding; Protein Conformation; Saccharomyces cerevisiae; Static Electricity; Thermodynamics; Tryptophan

2018
Calixarene capture of partially unfolded cytochrome c.
    FEBS letters, 2019, Volume: 593, Issue:16

    Topics: Arginine; Binding Sites; Calixarenes; Crystallography, X-Ray; Cytochromes c; Imidazoles; Lysine; Models, Molecular; Protein Unfolding; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins

2019
Sensitivity booster for mass detection enables unambiguous analysis of peptides, proteins, antibodies, and protein bioconjugates.
    Chemical communications (Cambridge, England), 2019, Aug-15, Volume: 55, Issue:67

    Topics: Cytochromes c; Lysine; Peptide Mapping; Peptides; Proteins; Sensitivity and Specificity; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Tandem Mass Spectrometry

2019
Enzyme-Instructed Activation of Pro-protein Therapeutics In Vivo.
    Journal of the American Chemical Society, 2019, 11-13, Volume: 141, Issue:45

    Topics: Antineoplastic Agents; Cell Proliferation; Cytochromes c; Drug Carriers; Drug Screening Assays, Antitumor; Gene Knockdown Techniques; Green Fluorescent Proteins; HEK293 Cells; HeLa Cells; Humans; Lysine; NAD(P)H Dehydrogenase (Quinone); Oxidation-Reduction; Prodrugs; Propionates; Quinones; Ribonuclease, Pancreatic

2019
Molecular insights on cytochrome c and nucleotide regulation of apoptosome function and its implication in cancer.
    Biochimica et biophysica acta. Molecular cell research, 2020, Volume: 1867, Issue:1

    Topics: Alanine; Amino Acid Substitution; Apoptosomes; Apoptotic Protease-Activating Factor 1; Case-Control Studies; Cell Transformation, Neoplastic; Cells, Cultured; Cytochromes c; Female; Humans; Lysine; Male; Models, Molecular; Molecular Docking Simulation; Mutant Proteins; Neoplasms; Nucleotides; PC-3 Cells; Protein Binding; Protein Interaction Mapping; Protein Multimerization; Signal Transduction

2020
Binding of S. cerevisiae iso-1 cytochrome c and its surface lysine-to-alanine variants to cardiolipin: charge effects and the role of the lipid to protein ratio.
    Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry, 2020, Volume: 25, Issue:3

    Topics: Alanine; Animals; Binding Sites; Cardiolipins; Cattle; Cytochromes c; Heart; Lysine; Molecular Dynamics Simulation; Molecular Structure; Mutation; Saccharomyces cerevisiae Proteins; Static Electricity; Surface Properties

2020
Probing the Effects of Heterogeneous Oxidative Modifications on the Stability of Cytochrome
    Journal of the American Society for Mass Spectrometry, 2021, Jan-06, Volume: 32, Issue:1

    Topics: Chloramines; Cytochromes c; Gases; Ion Mobility Spectrometry; Lysine; Oxidation-Reduction; Protein Stability; Protein Unfolding; Solutions; Spectrometry, Mass, Electrospray Ionization; Thermodynamics; Tosyl Compounds

2021
Novel Formaldehyde-Induced Modifications of Lysine Residue Pairs in Peptides and Proteins: Identification and Relevance to Vaccine Development.
    Molecular pharmaceutics, 2020, 11-02, Volume: 17, Issue:11

    Topics: Aldehydes; Chromatography, High Pressure Liquid; Cross-Linking Reagents; Cytochromes c; Deamination; Formaldehyde; Kinetics; Lysine; Magnetic Resonance Spectroscopy; Mass Spectrometry; Methylation; Molecular Structure; Peptides; Vaccines, Inactivated

2020
Lysine 72 substitutions differently affect lipid membrane permeabilizing and proapoptotic activities of horse heart cytochrome c.
    Biochemical and biophysical research communications, 2021, 04-09, Volume: 548

    Topics: Amino Acid Substitution; Animals; Apoptosis; Cytochromes c; Horses; Lipid Bilayers; Liposomes; Lysine; Myocardium; Permeability; Protein Binding; Time Factors

2021
Lysine 53 Acetylation of Cytochrome
    Cells, 2021, 04-03, Volume: 10, Issue:4

    Topics: Acetylation; Animals; Apoptosis; Cardiolipins; Caspase 3; Cell Line, Tumor; Crystallography, X-Ray; Cytochromes c; Electron Transport Complex IV; Humans; Lysine; Male; Mice; Molecular Dynamics Simulation; Mutation; Oxidation-Reduction; Oxygen Consumption; Peroxidase; Prostatic Neoplasms; Prostatic Neoplasms, Castration-Resistant; Reactive Oxygen Species; Warburg Effect, Oncologic; Xenograft Model Antitumor Assays

2021
Structural and functional insights into lysine acetylation of cytochrome c using mimetic point mutants.
    FEBS open bio, 2021, Volume: 11, Issue:12

    Topics: Acetylation; Animals; Binding Sites; Cytochromes c; Cytochromes c1; Electron Transport; Electron Transport Complex IV; Humans; Kinetics; Lysine; Mutation; Oxidation-Reduction; Protein Processing, Post-Translational; Structure-Activity Relationship; Thermodynamics

2021
Lysine-PEGylated Cytochrome C with Enhanced Shelf-Life Stability.
    Biosensors, 2022, Feb-04, Volume: 12, Issue:2

    Topics: Circular Dichroism; Cytochromes c; Lysine; Polyethylene Glycols; Proteins

2022
Nucleus-translocated mitochondrial cytochrome c liberates nucleophosmin-sequestered ARF tumor suppressor by changing nucleolar liquid-liquid phase separation.
    Nature structural & molecular biology, 2022, Volume: 29, Issue:10

    Topics: Arginine; Caspases; Cytochromes c; Lysine; Mitochondria; Nuclear Proteins; Nucleophosmin; Tumor Suppressor Proteins

2022
Cytochrome c lysine acetylation regulates cellular respiration and cell death in ischemic skeletal muscle.
    Nature communications, 2023, 07-13, Volume: 14, Issue:1

    Topics: Acetylation; Animals; Apoptosis; Cell Respiration; Cytochromes c; Lysine; Muscle, Skeletal; Phosphorylation; Protein Processing, Post-Translational; Reperfusion Injury; Swine

2023