lignin and shikimic acid
lignin has been researched along with shikimic acid in 29 studies
Compound Research Comparison
| Studies (lignin) | Trials (lignin) | Recent Studies (post-2010) (lignin) | Studies (shikimic acid) | Trials (shikimic acid) | Recent Studies (post-2010) (shikimic acid) |
|---|---|---|---|---|---|
| 13,390 | 26 | 9,534 | 1,172 | 2 | 480 |
Protein Interaction Comparison
| Protein | Taxonomy | lignin (IC50) | shikimic acid (IC50) |
|---|---|---|---|
| Chain A, 3-phosphoshikimate 1-carboxyvinyltransferase | Escherichia coli | 1200 | |
| Chain A, 3-phosphoshikimate 1-carboxyvinyltransferase | Escherichia coli | 1200 |
Research
Studies (29)
| Timeframe | Studies, this research(%) | All Research% |
|---|---|---|
| pre-1990 | 4 (13.79) | 18.7374 |
| 1990's | 0 (0.00) | 18.2507 |
| 2000's | 3 (10.34) | 29.6817 |
| 2010's | 14 (48.28) | 24.3611 |
| 2020's | 8 (27.59) | 2.80 |
Authors
| Authors | Studies |
|---|---|
| Higuchi, T | 1 |
| Martin, AK | 1 |
| Gamborg, OL | 1 |
| Geoffroy, P; Hoffmann, L; Legrand, M; Martz, F; Maury, S | 1 |
| Borsuk, LA; Nakazono, M; Qiu, F; Schnable, PS | 1 |
| BROWN, SA; NEISH, AC | 1 |
| Bahnweg, G; Betz, G; Haberer, K; Jehnes, S; Rennenberg, H; Sandermann, H | 1 |
| Aharoni, A; Bedair, M; Galili, G; Malitsky, S; Sumner, L; Tzin, V; Zvi, MMB | 1 |
| Bastien, C; Boerjan, W; Cesarino, I; Goeminne, G; Ivens, B; Kim, H; Marroni, F; Morgante, M; Morreel, K; Pinosio, S; Ralph, J; Van Acker, R; Vanholme, B; Vanholme, R | 1 |
| Araujo, P; Boerjan, W; Cesarino, I; Cross, J; Goeminne, G; Halpin, C; Haustraete, J; Kim, H; McClellan, C; Morreel, K; Ralph, J; Rataj, K; Simpson, GG; Sundin, L; Vanholme, B; Vanholme, R; Welsh, L; Xiao, Y | 1 |
| Dixon, RA; Escamilla-Treviño, LL; Hernandez, T; Shen, H; Xu, Y; Yin, Y | 1 |
| Bomal, C; Boyle, B; Caron, S; Duval, I; Fortin, É; Giguère, I; MacKay, JJ; Séguin, A; Stewart, D | 1 |
| Adams, PD; Baidoo, EE; Eudes, A; Keasling, JD; Lee, TS; Loqué, D; Pereira, JH; Teixeira Benites, V; Wang, G; Yogiswara, S | 1 |
| Chen, F; Dixon, RA; Escamilla-Trevino, L; Ha, CM; Kim, H; Ralph, J; Yarce, JC | 1 |
| Demura, T; Hasunuma, T; Hirai, MY; Kurata, T; Matsuda, M; Morisaki, K; Nakano, Y; Ohtani, M; Sano, R; Sawada, Y; Suzuki, S; Uy, AL; Yamamoto, A | 1 |
| Lee, JH; Wendisch, VF | 1 |
| Boerjan, W; Cesarino, I; Fonseca, FCA; Goeminne, G; Junior, JN; Kim, H; Padmakshan, D; Pallidis, A; Ralph, J; Saleme, MLS; Van Acker, R; Van Doorsselaere, J; Vanholme, R; Vargas, L; Voorend, W | 1 |
| Hirochika, H; Kishi-Kaboshi, M; Seo, S; Takahashi, A | 1 |
| Adams, ZP; Edwards, R; Ehlting, J | 1 |
| Alber, AV; Basilio-Lopes, A; Bassard, JE; Bihel, F; Ehlting, J; Lesot, A; Liu, Z; Renault, H; Schmitt, M; Ullmann, P; Werck-Reichhart, D | 1 |
| Chao, N; Gai, Y; Jiang, X; Wang, X; Zhang, M | 1 |
| Fujiwara, R; Kondo, A; Noda, S; Tanaka, T | 1 |
| Cui, N; Fan, H; Ma, L; Ma, Z; Meng, X; Tao, R; Yu, Y | 1 |
| Chen, Y; Hu, ZH; Li, JW; Li, T; Liu, CF; Teng, RM; Yang, N; Zhuang, J | 1 |
| Cho, KH; Colquhoun, TA; Keene, SA; Kim, JY | 1 |
| Ma, CY; Shen, XJ; Wang, PF; Wen, JL; Xu, LH; Xu, Y; Yuan, TQ | 1 |
| Hui, W; Li, H; Li, Q; Liu, N; Lu, F; Wang, B; Wang, Z; Wu, AM; Yang, L; Yue, F; Zeng, Q; Zhang, K; Zhang, S; Zhang, W | 1 |
| Ortiz, A; Sansinenea, E | 1 |
| Chi, BJ; Huang, HZ; Li, J; Liu, JW; Song, SW; Zhang, YC; Zheng, HL; Zhong, YH; Zhou, JJ; Zhu, XY; Zhuang, LH | 1 |
Reviews
3 review(s) available for lignin and shikimic acid
| Article | Year |
|---|---|
Formation and biological degradation of lignins.
Topics: 1-Propanol; Carbon Dioxide; Carbon Isotopes; Cell Wall; Chemical Phenomena; Chemistry; Cinnamates; Ethers; Flavoring Agents; Fungi; Guaifenesin; Lignin; Lyases; Methionine; Methyltransferases; Phenylalanine; Plants; Polysaccharides; Shikimic Acid; Transaminases; Trees; Tyrosine; Wood | 1971 |
Biotechnological production of aromatic compounds of the extended shikimate pathway from renewable biomass.
Topics: Amino Acids, Aromatic; Benzaldehydes; Biomass; Biotechnology; Corynebacterium glutamicum; Escherichia coli; Lignin; Metabolic Engineering; Metabolic Networks and Pathways; Organic Chemicals; Parabens; Phenylalanine; Pseudomonas putida; Saccharomyces cerevisiae; Shikimic Acid; Tryptophan; Tyrosine | 2017 |
Phenylpropanoid Derivatives and Their Role in Plants' Health and as antimicrobials.
Topics: Flavonoids; Lignin; Plants | 2023 |
Other Studies
26 other study(ies) available for lignin and shikimic acid
| Article | Year |
|---|---|
The urinary aromatic acids excreted by sheep given S24 perennial ryegrass cut at six stages of maturity.
Topics: Acids; Animal Feed; Animals; Benzoates; Chlorogenic Acid; Chromatography, Gas; Creatinine; Diet; Hippurates; Lignin; Nitrogen; Phenols; Phenylacetates; Poaceae; Propionates; Proteins; Quinic Acid; Sheep; Shikimic Acid | 1970 |
Aromatic metabolism in plants. V. The biosynthesis of chlorogenic acid and lignin in potato cell cultures.
Topics: Aldehydes; Benzene Derivatives; Carbon Isotopes; Chlorogenic Acid; Cinnamates; Flavoring Agents; Glucose; Lignin; Models, Biological; Phenylalanine; Plants, Edible; Quinic Acid; Shikimic Acid | 1967 |
Purification, cloning, and properties of an acyltransferase controlling shikimate and quinate ester intermediates in phenylpropanoid metabolism.
Topics: Acyl Coenzyme A; Acyltransferases; Amino Acid Sequence; Base Sequence; Cloning, Molecular; Coenzyme A; Dianthus; DNA, Plant; Esters; Genes, Plant; Lignin; Molecular Sequence Data; Molecular Structure; Nicotiana; Phenols; Phenylalanine; Phylogeny; Plant Structures; Quinic Acid; Recombinant Fusion Proteins; Sequence Alignment; Shikimic Acid | 2003 |
Laser-capture microdissection, a tool for the global analysis of gene expression in specific plant cell types: identification of genes expressed differentially in epidermal cells or vascular tissues of maize.
Topics: Aquaporins; Gene Expression Profiling; Gene Expression Regulation, Plant; Lasers; Lectins; Lignin; Metallothionein; Nucleic Acid Amplification Techniques; Plant Epidermis; Plant Stems; Reproducibility of Results; Shikimic Acid; Zea mays | 2003 |
Shikimic acid as a precursor in lignin biosynthesis.
Topics: Biochemical Phenomena; Cyclohexanes; Lignin; Plants; Secondary Metabolism; Shikimic Acid | 1955 |
Tree internal signalling and defence reactions under ozone exposure in sun and shade leaves of European beech (Fagus sylvatica L.) trees.
Topics: Abscisic Acid; Amino Acids, Cyclic; Antioxidants; Europe; Fagus; Gene Expression Regulation, Plant; Genes, Plant; Glutathione; Lignin; Ozone; Plant Leaves; Salicylic Acid; Shikimic Acid; Signal Transduction; Sunlight; Superoxide Dismutase; Trees | 2007 |
Expression of a bacterial feedback-insensitive 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase of the shikimate pathway in Arabidopsis elucidates potential metabolic bottlenecks between primary and secondary metabolism.
Topics: 3-Deoxy-7-Phosphoheptulonate Synthase; Arabidopsis; Escherichia coli; Feedback, Physiological; Flowers; Gas Chromatography-Mass Spectrometry; Gene Expression; Gene Expression Regulation, Plant; Lignin; Metabolic Networks and Pathways; Plant Stems; Plants, Genetically Modified; Principal Component Analysis; Shikimic Acid; Tryptophan | 2012 |
Breeding with rare defective alleles (BRDA): a natural Populus nigra HCT mutant with modified lignin as a case study.
Topics: Acyltransferases; Alleles; Breeding; Cell Wall; Homozygote; Lignin; Magnetic Resonance Spectroscopy; Molecular Sequence Data; Mutation; Populus; Sequence Analysis, DNA; Shikimic Acid | 2013 |
Caffeoyl shikimate esterase (CSE) is an enzyme in the lignin biosynthetic pathway in Arabidopsis.
Topics: Arabidopsis; Arabidopsis Proteins; Carboxylic Ester Hydrolases; Glucose; Lignin; Metabolic Networks and Pathways; Mutation; Shikimic Acid; Substrate Specificity | 2013 |
Early lignin pathway enzymes and routes to chlorogenic acid in switchgrass (Panicum virgatum L.).
Topics: Acyltransferases; Biosynthetic Pathways; Chlorogenic Acid; Cytochrome P-450 Enzyme System; Electrophoresis, Polyacrylamide Gel; Enzymes; Gene Expression Profiling; Gene Expression Regulation, Plant; Kinetics; Lignin; Molecular Sequence Data; Panicum; Phylogeny; Plant Proteins; Shikimic Acid; Substrate Specificity | 2014 |
Opposite action of R2R3-MYBs from different subgroups on key genes of the shikimate and monolignol pathways in spruce.
Topics: Base Sequence; Biosynthetic Pathways; DNA, Plant; Gene Expression Regulation, Plant; Genes, Plant; Lignin; Molecular Sequence Annotation; Molecular Sequence Data; Oligonucleotide Array Sequence Analysis; Picea; Pinus; Plant Proteins; Promoter Regions, Genetic; Protein Binding; RNA, Messenger; Shikimic Acid; Statistics, Nonparametric; Time Factors; Transcriptional Activation | 2014 |
Exploiting the Substrate Promiscuity of Hydroxycinnamoyl-CoA:Shikimate Hydroxycinnamoyl Transferase to Reduce Lignin.
Topics: Acyltransferases; Arabidopsis; Binding Sites; Biomass; Biosynthetic Pathways; Carbohydrate Metabolism; Coumaric Acids; Hydroxybenzoates; Lignin; Models, Molecular; Oxidation-Reduction; Plants; Plants, Genetically Modified; Recombinant Proteins; Shikimic Acid; Substrate Specificity | 2016 |
An essential role of caffeoyl shikimate esterase in monolignol biosynthesis in Medicago truncatula.
Topics: Arabidopsis Proteins; Biosynthetic Pathways; Brachypodium; Carboxylic Ester Hydrolases; Esterases; Gene Expression Regulation, Plant; Lignin; Medicago truncatula; Mutagenesis, Insertional; Nicotiana; Panicum; Phenotype; Phylogeny; Plant Proteins; Plant Stems; Plants, Genetically Modified; Populus; Recombinant Proteins; Shikimic Acid; Zea mays | 2016 |
Primary Metabolism during Biosynthesis of Secondary Wall Polymers of Protoxylem Vessel Elements.
Topics: Amino Acids; Biosynthetic Pathways; Cell Differentiation; Cell Wall; Gene Expression Profiling; Gene Expression Regulation, Plant; Glycolysis; Lignin; Metabolome; Metabolomics; Nicotiana; Polymers; Principal Component Analysis; Shikimic Acid; Xylem | 2016 |
Silencing
Topics: Biomass; Carbohydrate Metabolism; Cellulose; Down-Regulation; Esterases; Gene Expression Regulation, Plant; Gene Silencing; Genes, Plant; Lignin; Magnetic Resonance Spectroscopy; Metabolic Networks and Pathways; Phenols; Plant Development; Plant Proteins; Plants, Genetically Modified; Populus; Shikimic Acid; Xylem | 2017 |
The MAMP-Responsive MYB Transcription Factors MYB30, MYB55 and MYB110 Activate the HCAA Synthesis Pathway and Enhance Immunity in Rice.
Topics: Base Sequence; Biosynthetic Pathways; Conserved Sequence; Coumaric Acids; Disease Resistance; Gene Expression Regulation, Plant; Genes, Plant; Lignin; Nucleotide Motifs; Oryza; Pathogen-Associated Molecular Pattern Molecules; Plant Diseases; Plant Immunity; Plant Proteins; Plants, Genetically Modified; Promoter Regions, Genetic; Shikimic Acid; Transcription Factors; Transcriptional Activation | 2018 |
The regulatory role of shikimate in plant phenylalanine metabolism.
Topics: Lignin; Metabolic Networks and Pathways; Phenylalanine; Plants; Protein Biosynthesis; Shikimic Acid | 2019 |
Evolution of coumaroyl conjugate 3-hydroxylases in land plants: lignin biosynthesis and defense.
Topics: Arabidopsis; Bryophyta; Bryopsida; Cytochrome P-450 Enzyme System; Evolution, Molecular; Lignin; Magnoliopsida; Phylogeny; Plant Proteins; Populus; Pteris; Selaginellaceae; Shikimic Acid | 2019 |
Functional Characteristics of Caffeoyl Shikimate Esterase in
Topics: Arabidopsis; Arabidopsis Proteins; Carboxylic Ester Hydrolases; Cycadopsida; Gene Expression Regulation, Plant; Larix; Lignin; Phylogeny; Plants, Genetically Modified; Shikimic Acid | 2019 |
Metabolic engineering of Escherichia coli for shikimate pathway derivative production from glucose-xylose co-substrate.
Topics: Escherichia coli; Escherichia coli Proteins; Glucose; Lignin; Metabolic Engineering; Metabolic Networks and Pathways; Propylene Glycol; Shikimic Acid; Sorbic Acid; Tyrosine; Xylose | 2020 |
Lignin biosynthesis regulated by CsCSE1 is required for Cucumis sativus defence to Podosphaera xanthii.
Topics: Ascomycota; Cucumis sativus; Lignin; Plant Breeding; Plant Diseases; Shikimic Acid | 2022 |
Exogenous methyl jasmonate and cytokinin antagonistically regulate lignin biosynthesis by mediating CsHCT expression in Camellia sinensis.
Topics: Camellia sinensis; Cytokinins; Gene Expression Regulation, Plant; Lignin; Plant Leaves; Plant Proteins; Tea | 2023 |
Altered profile of floral volatiles and lignin content by down-regulation of Caffeoyl Shikimate Esterase in Petunia.
Topics: Down-Regulation; Esterases; Gene Expression Regulation, Plant; Lignin; Mixed Function Oxygenases; Petunia; Plant Proteins | 2023 |
Conversion of control and genetically-modified poplar into multi-scale products using integrated pretreatments.
Topics: Esterases; Hydrolysis; Lignin; Wood | 2023 |
CRISPR/Cas9 mutated p-coumaroyl shikimate 3'-hydroxylase 3 gene in Populus tomentosa reveals lignin functioning on supporting tree upright.
Topics: CRISPR-Cas Systems; Flavonoids; Gene Expression Regulation, Plant; Lignin; Mixed Function Oxygenases; Plant Proteins; Plants, Genetically Modified; Populus; Trees | 2023 |
Combined metabolome and transcriptome analysis reveals a critical role of lignin biosynthesis and lignification in stem-like pneumatophore development of the mangrove Avicennia marina.
Topics: Avicennia; Gene Expression Profiling; Lignin; Metabolome; Reproducibility of Results; Transcriptome | 2023 |