Page last updated: 2024-08-23

kethoxal and dimethyl sulfate

kethoxal has been researched along with dimethyl sulfate in 27 studies

Research

Studies (27)

Timeframe	Studies, this research(%)	All Research%
pre-1990	6 (22.22)	18.7374
1990's	10 (37.04)	18.2507
2000's	10 (37.04)	29.6817
2010's	1 (3.70)	24.3611
2020's	0 (0.00)	2.80

Authors

Authors	Studies
Alford, RL; Belmont, JW; Honda, S; Lawrence, CB	1
Gerbi, SA; Stebbins-Boaz, B	1
Jaeger, JA; Turner, DH; Zuker, M	1
Lee, JC; Thweatt, R	1
Moazed, D; Noller, HF; Stern, S	1
Moazed, D; Noller, HF	1
Black, DL; Pinto, AL	1
Changchien, LM; Craven, GR; Noller, HF; Stern, S	1
Changchien, LM; Craven, GR; Noller, HF; Svensson, P	1
Changchien, LM; Craven, GR; Noller, HF; Powers, T	1
Chang, JT; Green, CB; Wolf, RE	1
Cocito, C; Di Giambattista, M; Vannuffel, P	1
Böck, A; Hüttenhofer, A; Westhof, E	1
Lancaster, AM; Nagel, RJ; Zahler, AM	1
Atkins, JF; Fayet, O; Gesteland, RF; Prère, MF; Rettberg, CC	1
Agris, PF; Ashraf, SS; Guenther, R	1
Baudin, F; Blondel, D; Iseni, F; Ruigrok, RW	1
Dahlquist, KD; Puglisi, JD	1
Bogdanov, AA; Dahlberg, AE; Dontsova, O; Sergiev, PV	1
Larsson, SL; Nygård, O	1
Brosius, J; Hüttenhofer, A; Kopylov, AM; Rozhdestvensky, TS	1
Chou, J; Garlapati, S; Wang, CC	1
Fabris, D; Kellersberger, KA; Kruppa, GH; Young, MM; Yu, E	1
Bailey, JM; Tapprich, WE	1
Engelke, DR; Ziehler, WA	1
Hase, Y; Himeno, H; Hirata, Y; Kimura, T; Muto, A; Takagi, K	1
Debeljak, F; Handl, S; Sachsenmaier, N; Waldsich, C	1

Other Studies

27 other study(ies) available for kethoxal and dimethyl sulfate

Article	Year
RNA secondary structure analysis of the packaging signal for Moloney murine leukemia virus. Virology, 1991, Volume: 183, Issue:2 Topics: Aldehydes; Algorithms; Animals; Antiviral Agents; Base Sequence; Butanones; Carbodiimides; Cell Line; CME-Carbodiimide; Computer Simulation; Molecular Sequence Data; Moloney murine leukemia virus; Mutagens; Nucleic Acid Conformation; Phylogeny; RNA, Viral; Sulfuric Acid Esters	1991
Structural analysis of the peptidyl transferase region in ribosomal RNA of the eukaryote Xenopus laevis. Journal of molecular biology, 1991, Jan-05, Volume: 217, Issue:1 Topics: Aldehydes; Animals; Base Sequence; Butanones; Carbodiimides; CME-Carbodiimide; Molecular Sequence Data; Nucleic Acid Conformation; Peptidyl Transferases; Ribosomal Proteins; Ribosomes; RNA, Ribosomal, 28S; Substrate Specificity; Sulfuric Acid Esters; Xenopus laevis	1991
Melting and chemical modification of a cyclized self-splicing group I intron: similarity of structures in 1 M Na+, in 10 mM Mg2+, and in the presence of substrate. Biochemistry, 1990, Nov-06, Volume: 29, Issue:44 Topics: Aldehydes; Animals; Base Sequence; Butanones; Carbodiimides; CME-Carbodiimide; Computer Simulation; Cross-Linking Reagents; Diethyl Pyrocarbonate; Introns; Magnesium; Molecular Sequence Data; Nucleic Acid Conformation; Nucleic Acid Denaturation; RNA Splicing; RNA, Catalytic; Sodium; Sulfuric Acid Esters; Tetrahymena	1990
Yeast precursor ribosomal RNA. Molecular cloning and probing the higher-order structure of the internal transcribed spacer I by kethoxal and dimethylsulfate modification. Journal of molecular biology, 1990, Jan-20, Volume: 211, Issue:2 Topics: Aldehydes; Base Composition; Base Sequence; Butanones; Cloning, Molecular; DNA, Ribosomal; Molecular Sequence Data; Nucleic Acid Conformation; Oligonucleotide Probes; Plasmids; Restriction Mapping; RNA Precursors; RNA, Fungal; RNA, Ribosomal; Saccharomyces cerevisiae; Software; Sulfuric Acid Esters; Sulfuric Acids; Transcription, Genetic	1990
Rapid chemical probing of conformation in 16 S ribosomal RNA and 30 S ribosomal subunits using primer extension. Journal of molecular biology, 1986, Feb-05, Volume: 187, Issue:3 Topics: Aldehydes; Autoradiography; Base Sequence; Butanones; CME-Carbodiimide; Escherichia coli; Macromolecular Substances; Models, Molecular; Nucleic Acid Conformation; Ribosomes; RNA, Bacterial; RNA, Ribosomal; Sulfuric Acid Esters	1986
Transfer RNA shields specific nucleotides in 16S ribosomal RNA from attack by chemical probes. Cell, 1986, Dec-26, Volume: 47, Issue:6 Topics: Aldehydes; Butanones; CME-Carbodiimide; Escherichia coli; Poly U; Ribosomes; RNA, Bacterial; RNA, Fungal; RNA, Ribosomal; RNA, Transfer, Amino Acyl; Sulfuric Acid Esters; Yeasts	1986
U5 small nuclear ribonucleoprotein: RNA structure analysis and ATP-dependent interaction with U4/U6. Molecular and cellular biology, 1989, Volume: 9, Issue:8 Topics: Adenosine Triphosphate; Aldehydes; Base Sequence; Butanones; Centrifugation, Density Gradient; CME-Carbodiimide; Endoribonucleases; Molecular Sequence Data; Nucleic Acid Conformation; Ribonuclease H; Ribonucleoproteins; Ribonucleoproteins, Small Nuclear; RNA Probes; RNA, Small Nuclear; Sulfuric Acid Esters	1989
Interaction of proteins S16, S17 and S20 with 16 S ribosomal RNA. Journal of molecular biology, 1988, Mar-20, Volume: 200, Issue:2 Topics: Aldehydes; Base Sequence; Butanones; Nucleic Acid Conformation; Ribosomal Proteins; Ribosomes; RNA, Ribosomal; RNA, Ribosomal, 16S; Sulfuric Acid Esters	1988
Interaction of ribosomal proteins, S6, S8, S15 and S18 with the central domain of 16 S ribosomal RNA. Journal of molecular biology, 1988, Mar-20, Volume: 200, Issue:2 Topics: Aldehydes; Autoradiography; Base Sequence; Butanones; Nucleic Acid Conformation; Ribonucleases; Ribosomal Protein S6; Ribosomal Proteins; RNA, Ribosomal; RNA, Ribosomal, 16S; Sulfuric Acid Esters	1988
Probing the assembly of the 3' major domain of 16 S ribosomal RNA. Quaternary interactions involving ribosomal proteins S7, S9 and S19. Journal of molecular biology, 1988, Mar-20, Volume: 200, Issue:2 Topics: Aldehydes; Autoradiography; Base Sequence; Butanones; Nucleic Acid Conformation; Ribosomal Protein S9; Ribosomal Proteins; RNA, Ribosomal; RNA, Ribosomal, 16S; Sulfuric Acid Esters	1988
Inhibition of translation initiation on Escherichia coli gnd mRNA by formation of a long-range secondary structure involving the ribosome binding site and the internal complementary sequence. Journal of bacteriology, 1995, Volume: 177, Issue:22 Topics: Acetates; Aldehydes; Base Sequence; beta-Galactosidase; Binding Sites; Butanones; Escherichia coli; Gene Expression Regulation, Bacterial; Glucose; Molecular Sequence Data; Nucleic Acid Conformation; Operon; Peptide Chain Initiation, Translational; Phosphogluconate Dehydrogenase; Recombinant Fusion Proteins; Ribosomes; RNA, Bacterial; RNA, Complementary; RNA, Messenger; Sequence Deletion; Sulfuric Acid Esters	1995
Chemical probing of a virginiamycin M-promoted conformational change of the peptidyl-transferase domain. Nucleic acids research, 1994, Oct-25, Volume: 22, Issue:21 Topics: Aldehydes; Base Sequence; Butanones; Diethyl Pyrocarbonate; Drug Synergism; Molecular Sequence Data; Nucleic Acid Conformation; Peptidyl Transferases; Protein Conformation; Ribosomes; RNA, Ribosomal, 23S; Sulfuric Acid Esters; Virginiamycin	1994
Solution structure of mRNA hairpins promoting selenocysteine incorporation in Escherichia coli and their base-specific interaction with special elongation factor SELB. RNA (New York, N.Y.), 1996, Volume: 2, Issue:4 Topics: Aldehydes; Bacterial Proteins; Base Sequence; Butanones; CME-Carbodiimide; Computer Simulation; Cross-Linking Reagents; DNA Primers; Escherichia coli; Formate Dehydrogenases; Hydrogenase; Hydroxyl Radical; Lead; Molecular Probes; Molecular Sequence Data; Multienzyme Complexes; Nucleic Acid Conformation; Peptide Elongation Factors; RNA, Messenger; Selenocysteine; Single-Strand Specific DNA and RNA Endonucleases; Solutions; Sulfuric Acid Esters	1996
Specific binding of an exonic splicing enhancer by the pre-mRNA splicing factor SRp55. RNA (New York, N.Y.), 1998, Volume: 4, Issue:1 Topics: Adenosine; Aldehydes; Animals; Base Sequence; Birds; Butanones; Enhancer Elements, Genetic; Exons; Guanosine; Humans; Molecular Sequence Data; Mutation; Myocardium; Nuclear Proteins; Phosphoproteins; RNA Precursors; RNA Splicing; RNA-Binding Proteins; RNA, Messenger; Serine-Arginine Splicing Factors; Sulfuric Acid Esters; Troponin; Troponin T	1998
A three-way junction and constituent stem-loops as the stimulator for programmed -1 frameshifting in bacterial insertion sequence IS911. Journal of molecular biology, 1999, Mar-12, Volume: 286, Issue:5 Topics: Aldehydes; Base Pairing; Base Sequence; Butanones; CME-Carbodiimide; DNA Transposable Elements; Escherichia coli; Frameshifting, Ribosomal; Imidazoles; Molecular Sequence Data; Mutation; Nucleic Acid Conformation; Recombination, Genetic; Regulatory Sequences, Nucleic Acid; Ribonucleases; RNA, Bacterial; RNA, Double-Stranded; RNA, Messenger; Structure-Activity Relationship; Sulfuric Acid Esters; Temperature	1999
Orientation of the tRNA anticodon in the ribosomal P-site: quantitative footprinting with U33-modified, anticodon stem and loop domains. RNA (New York, N.Y.), 1999, Volume: 5, Issue:9 Topics: Aldehydes; Anticodon; Antiviral Agents; Base Sequence; Butanones; Dose-Response Relationship, Drug; Genetic Techniques; Kinetics; Molecular Sequence Data; Mutagens; Ribosomes; RNA, Fungal; RNA, Ribosomal, 16S; RNA, Transfer; RNA, Transfer, Phe; Sulfuric Acid Esters; Temperature	1999
Structure of the RNA inside the vesicular stomatitis virus nucleocapsid. RNA (New York, N.Y.), 2000, Volume: 6, Issue:2 Topics: Aldehydes; Animals; Base Sequence; Butanones; Clone Cells; Cloning, Molecular; Cricetinae; DNA, Complementary; DNA, Viral; Genome, Viral; Molecular Probe Techniques; Nucleic Acid Conformation; Nucleocapsid; RNA, Viral; Sulfuric Acid Esters; Transcription, Genetic; Vesicular stomatitis Indiana virus	2000
Interaction of translation initiation factor IF1 with the E. coli ribosomal A site. Journal of molecular biology, 2000, May-26, Volume: 299, Issue:1 Topics: Aldehydes; Alleles; Aminoglycosides; Anti-Bacterial Agents; Bacterial Proteins; Base Sequence; Binding Sites; Butanones; Escherichia coli; Eukaryotic Initiation Factor-1; Models, Biological; Models, Molecular; Mutation; Nucleic Acid Conformation; Phenotype; Prokaryotic Initiation Factor-1; Protein Binding; Ribosomes; RNA; RNA, Bacterial; RNA, Ribosomal, 16S; RNA, Transfer; Sulfuric Acid Esters; Thermodynamics	2000
Mutations at position A960 of E. coli 23 S ribosomal RNA influence the structure of 5 S ribosomal RNA and the peptidyltransferase region of 23 S ribosomal RNA. Journal of molecular biology, 2000, Jun-02, Volume: 299, Issue:2 Topics: Aldehydes; Base Sequence; Binding Sites; Butanones; CME-Carbodiimide; Escherichia coli; Genes, Bacterial; GTP Phosphohydrolases; Molecular Sequence Data; Mutation; Nucleic Acid Conformation; Peptidyl Transferases; Phenotype; Protein Biosynthesis; Ribosomes; RNA-Binding Proteins; RNA, Bacterial; RNA, Ribosomal, 23S; RNA, Ribosomal, 5S; RNA, Transfer; rRNA Operon; Structure-Activity Relationship; Sulfuric Acid Esters	2000
Proposed secondary structure of eukaryote specific expansion segment 15 in 28S rRNA from mice, rats, and rabbits. Biochemistry, 2001, Mar-13, Volume: 40, Issue:10 Topics: Aldehydes; Animals; Base Sequence; Butanones; CME-Carbodiimide; Conserved Sequence; Cross-Linking Reagents; Mice; Molecular Sequence Data; Nucleic Acid Conformation; Rabbits; Rats; Rats, Sprague-Dawley; Ribosomal Proteins; Ribosomes; RNA, Ribosomal, 28S; Sequence Alignment; Sequence Analysis, RNA; Structure-Activity Relationship; Sulfuric Acid Esters	2001
Neuronal BC1 RNA structure: evolutionary conversion of a tRNA(Ala) domain into an extended stem-loop structure. RNA (New York, N.Y.), 2001, Volume: 7, Issue:5 Topics: Aldehydes; Animals; Base Sequence; Butanones; CME-Carbodiimide; Cricetinae; Cricetulus; Evolution, Molecular; Guinea Pigs; Mice; Models, Molecular; Molecular Sequence Data; Neurons; Nucleic Acid Conformation; Poly A; Rats; RNA, Small Cytoplasmic; RNA, Transfer, Ala; Sciuridae; Sulfuric Acid Esters	2001
Specific secondary structures in the capsid-coding region of giardiavirus transcript are required for its translation in Giardia lamblia. Journal of molecular biology, 2001, May-11, Volume: 308, Issue:4 Topics: Aldehydes; Animals; Base Pairing; Base Sequence; Butanones; Capsid; CME-Carbodiimide; Gene Expression Regulation, Viral; Giardia lamblia; Giardiavirus; Mutation; Nucleic Acid Conformation; Protein Biosynthesis; RNA Stability; RNA, Messenger; RNA, Viral; Software; Structure-Activity Relationship; Sulfuric Acid Esters; Thermodynamics; Transfection	2001
Top-down characterization of nucleic acids modified by structural probes using high-resolution tandem mass spectrometry and automated data interpretation. Analytical chemistry, 2004, May-01, Volume: 76, Issue:9 Topics: Aldehydes; Automation; Butanones; CME-Carbodiimide; Databases, Factual; HIV-1; Nucleic Acids; Sensitivity and Specificity; Spectrometry, Mass, Electrospray Ionization; Spectroscopy, Fourier Transform Infrared; Sulfuric Acid Esters	2004
Structure of the 5' nontranslated region of the coxsackievirus b3 genome: Chemical modification and comparative sequence analysis. Journal of virology, 2007, Volume: 81, Issue:2 Topics: 5' Untranslated Regions; Aldehydes; Algorithms; Base Sequence; Butanones; CME-Carbodiimide; Enterovirus B, Human; Genome, Viral; Humans; Molecular Sequence Data; Nucleic Acid Conformation; RNA, Viral; Sequence Analysis, DNA; Structure-Activity Relationship; Sulfuric Acid Esters	2007
Probing RNA structure with chemical reagents and enzymes. Current protocols in nucleic acid chemistry, 2001, Volume: Chapter 6 Topics: Aldehydes; Bacteriophage T4; Base Pairing; Biochemistry; Butanones; CME-Carbodiimide; Diethyl Pyrocarbonate; Electrophoresis; Endonucleases; Ethylnitrosourea; Indicators and Reagents; Nucleic Acid Conformation; Phosphorus Radioisotopes; Polynucleotide 5'-Hydroxyl-Kinase; Reference Standards; RNA; Sulfuric Acid Esters	2001
Ribosome-small-subunit-dependent GTPase interacts with tRNA-binding sites on the ribosome. Journal of molecular biology, 2008, Aug-29, Volume: 381, Issue:2 Topics: Aldehydes; Binding Sites; Butanones; Escherichia coli Proteins; GTP Phosphohydrolases; Guanosine Triphosphate; Hygromycin B; Protein Binding; Ribosome Subunits; RNA, Messenger; RNA, Transfer; Sulfuric Acid Esters	2008
Mapping RNA structure in vitro using nucleobase-specific probes. Methods in molecular biology (Clifton, N.J.), 2014, Volume: 1086 Topics: Aldehydes; Benzenesulfonates; Butanones; Denaturing Gradient Gel Electrophoresis; DNA Primers; Molecular Probe Techniques; Molecular Probes; Nucleic Acid Conformation; RNA; RNA Folding; Sulfuric Acid Esters; Transcription, Genetic	2014