Page last updated: 2024-08-23

kethoxal and cme-carbodiimide

kethoxal has been researched along with cme-carbodiimide in 19 studies

Research

Studies (19)

TimeframeStudies, this research(%)All Research%
pre-19903 (15.79)18.7374
1990's8 (42.11)18.2507
2000's8 (42.11)29.6817
2010's0 (0.00)24.3611
2020's0 (0.00)2.80

Authors

AuthorsStudies
Alford, RL; Belmont, JW; Honda, S; Lawrence, CB1
Gerbi, SA; Stebbins-Boaz, B1
Jaeger, JA; Turner, DH; Zuker, M1
Moazed, D; Noller, HF; Stern, S1
Moazed, D; Noller, HF1
Black, DL; Pinto, AL1
Crothers, DM; Harris, KA; Ullu, E1
Noller, HF; von Ahsen, U1
Ericson, G; Minchew, P; Wollenzien, P1
Böck, A; Hüttenhofer, A; Westhof, E1
Atkins, JF; Fayet, O; Gesteland, RF; Prère, MF; Rettberg, CC1
Bogdanov, AA; Dahlberg, AE; Dontsova, O; Sergiev, PV1
Larsson, SL; Nygård, O1
Brosius, J; Hüttenhofer, A; Kopylov, AM; Rozhdestvensky, TS1
Chou, J; Garlapati, S; Wang, CC1
Ahlquist, P; Baumstark, T1
Fabris, D; Kellersberger, KA; Kruppa, GH; Young, MM; Yu, E1
Bailey, JM; Tapprich, WE1
Engelke, DR; Ziehler, WA1

Other Studies

19 other study(ies) available for kethoxal and cme-carbodiimide

ArticleYear
RNA secondary structure analysis of the packaging signal for Moloney murine leukemia virus.
    Virology, 1991, Volume: 183, Issue:2

    Topics: Aldehydes; Algorithms; Animals; Antiviral Agents; Base Sequence; Butanones; Carbodiimides; Cell Line; CME-Carbodiimide; Computer Simulation; Molecular Sequence Data; Moloney murine leukemia virus; Mutagens; Nucleic Acid Conformation; Phylogeny; RNA, Viral; Sulfuric Acid Esters

1991
Structural analysis of the peptidyl transferase region in ribosomal RNA of the eukaryote Xenopus laevis.
    Journal of molecular biology, 1991, Jan-05, Volume: 217, Issue:1

    Topics: Aldehydes; Animals; Base Sequence; Butanones; Carbodiimides; CME-Carbodiimide; Molecular Sequence Data; Nucleic Acid Conformation; Peptidyl Transferases; Ribosomal Proteins; Ribosomes; RNA, Ribosomal, 28S; Substrate Specificity; Sulfuric Acid Esters; Xenopus laevis

1991
Melting and chemical modification of a cyclized self-splicing group I intron: similarity of structures in 1 M Na+, in 10 mM Mg2+, and in the presence of substrate.
    Biochemistry, 1990, Nov-06, Volume: 29, Issue:44

    Topics: Aldehydes; Animals; Base Sequence; Butanones; Carbodiimides; CME-Carbodiimide; Computer Simulation; Cross-Linking Reagents; Diethyl Pyrocarbonate; Introns; Magnesium; Molecular Sequence Data; Nucleic Acid Conformation; Nucleic Acid Denaturation; RNA Splicing; RNA, Catalytic; Sodium; Sulfuric Acid Esters; Tetrahymena

1990
Rapid chemical probing of conformation in 16 S ribosomal RNA and 30 S ribosomal subunits using primer extension.
    Journal of molecular biology, 1986, Feb-05, Volume: 187, Issue:3

    Topics: Aldehydes; Autoradiography; Base Sequence; Butanones; CME-Carbodiimide; Escherichia coli; Macromolecular Substances; Models, Molecular; Nucleic Acid Conformation; Ribosomes; RNA, Bacterial; RNA, Ribosomal; Sulfuric Acid Esters

1986
Transfer RNA shields specific nucleotides in 16S ribosomal RNA from attack by chemical probes.
    Cell, 1986, Dec-26, Volume: 47, Issue:6

    Topics: Aldehydes; Butanones; CME-Carbodiimide; Escherichia coli; Poly U; Ribosomes; RNA, Bacterial; RNA, Fungal; RNA, Ribosomal; RNA, Transfer, Amino Acyl; Sulfuric Acid Esters; Yeasts

1986
U5 small nuclear ribonucleoprotein: RNA structure analysis and ATP-dependent interaction with U4/U6.
    Molecular and cellular biology, 1989, Volume: 9, Issue:8

    Topics: Adenosine Triphosphate; Aldehydes; Base Sequence; Butanones; Centrifugation, Density Gradient; CME-Carbodiimide; Endoribonucleases; Molecular Sequence Data; Nucleic Acid Conformation; Ribonuclease H; Ribonucleoproteins; Ribonucleoproteins, Small Nuclear; RNA Probes; RNA, Small Nuclear; Sulfuric Acid Esters

1989
In vivo structural analysis of spliced leader RNAs in Trypanosoma brucei and Leptomonas collosoma: a flexible structure that is independent of cap4 methylations.
    RNA (New York, N.Y.), 1995, Volume: 1, Issue:4

    Topics: Aldehydes; Animals; Base Sequence; Butanones; Cell Membrane Permeability; CME-Carbodiimide; Cross-Linking Reagents; Methylation; Molecular Sequence Data; Nucleic Acid Conformation; RNA Caps; RNA Precursors; RNA Splicing; RNA, Protozoan; Trypanosoma brucei brucei; Trypanosomatina

1995
Identification of bases in 16S rRNA essential for tRNA binding at the 30S ribosomal P site.
    Science (New York, N.Y.), 1995, Jan-13, Volume: 267, Issue:5195

    Topics: Aldehydes; Base Composition; Binding Sites; Butanones; CME-Carbodiimide; Codon; Guanine; Nucleic Acid Conformation; Ribosomes; RNA, Bacterial; RNA, Messenger; RNA, Ribosomal, 16S; RNA, Transfer, Leu; RNA, Transfer, Phe; Sulfides

1995
Structural changes in base-paired region 28 in 16 S rRNA close to the decoding region of the 30 S ribosomal subunit are correlated to changes in tRNA binding.
    Journal of molecular biology, 1995, Jul-21, Volume: 250, Issue:4

    Topics: Aldehydes; Base Composition; Base Sequence; Binding Sites; Butanones; Centrifugation, Density Gradient; CME-Carbodiimide; Cross-Linking Reagents; Dimethyl Sulfoxide; Escherichia coli; Magnesium; Models, Molecular; Molecular Sequence Data; Mutagenesis, Site-Directed; Nucleic Acid Conformation; Poly U; Ribosomes; RNA, Bacterial; RNA, Ribosomal, 16S; RNA, Transfer, Phe

1995
Solution structure of mRNA hairpins promoting selenocysteine incorporation in Escherichia coli and their base-specific interaction with special elongation factor SELB.
    RNA (New York, N.Y.), 1996, Volume: 2, Issue:4

    Topics: Aldehydes; Bacterial Proteins; Base Sequence; Butanones; CME-Carbodiimide; Computer Simulation; Cross-Linking Reagents; DNA Primers; Escherichia coli; Formate Dehydrogenases; Hydrogenase; Hydroxyl Radical; Lead; Molecular Probes; Molecular Sequence Data; Multienzyme Complexes; Nucleic Acid Conformation; Peptide Elongation Factors; RNA, Messenger; Selenocysteine; Single-Strand Specific DNA and RNA Endonucleases; Solutions; Sulfuric Acid Esters

1996
A three-way junction and constituent stem-loops as the stimulator for programmed -1 frameshifting in bacterial insertion sequence IS911.
    Journal of molecular biology, 1999, Mar-12, Volume: 286, Issue:5

    Topics: Aldehydes; Base Pairing; Base Sequence; Butanones; CME-Carbodiimide; DNA Transposable Elements; Escherichia coli; Frameshifting, Ribosomal; Imidazoles; Molecular Sequence Data; Mutation; Nucleic Acid Conformation; Recombination, Genetic; Regulatory Sequences, Nucleic Acid; Ribonucleases; RNA, Bacterial; RNA, Double-Stranded; RNA, Messenger; Structure-Activity Relationship; Sulfuric Acid Esters; Temperature

1999
Mutations at position A960 of E. coli 23 S ribosomal RNA influence the structure of 5 S ribosomal RNA and the peptidyltransferase region of 23 S ribosomal RNA.
    Journal of molecular biology, 2000, Jun-02, Volume: 299, Issue:2

    Topics: Aldehydes; Base Sequence; Binding Sites; Butanones; CME-Carbodiimide; Escherichia coli; Genes, Bacterial; GTP Phosphohydrolases; Molecular Sequence Data; Mutation; Nucleic Acid Conformation; Peptidyl Transferases; Phenotype; Protein Biosynthesis; Ribosomes; RNA-Binding Proteins; RNA, Bacterial; RNA, Ribosomal, 23S; RNA, Ribosomal, 5S; RNA, Transfer; rRNA Operon; Structure-Activity Relationship; Sulfuric Acid Esters

2000
Proposed secondary structure of eukaryote specific expansion segment 15 in 28S rRNA from mice, rats, and rabbits.
    Biochemistry, 2001, Mar-13, Volume: 40, Issue:10

    Topics: Aldehydes; Animals; Base Sequence; Butanones; CME-Carbodiimide; Conserved Sequence; Cross-Linking Reagents; Mice; Molecular Sequence Data; Nucleic Acid Conformation; Rabbits; Rats; Rats, Sprague-Dawley; Ribosomal Proteins; Ribosomes; RNA, Ribosomal, 28S; Sequence Alignment; Sequence Analysis, RNA; Structure-Activity Relationship; Sulfuric Acid Esters

2001
Neuronal BC1 RNA structure: evolutionary conversion of a tRNA(Ala) domain into an extended stem-loop structure.
    RNA (New York, N.Y.), 2001, Volume: 7, Issue:5

    Topics: Aldehydes; Animals; Base Sequence; Butanones; CME-Carbodiimide; Cricetinae; Cricetulus; Evolution, Molecular; Guinea Pigs; Mice; Models, Molecular; Molecular Sequence Data; Neurons; Nucleic Acid Conformation; Poly A; Rats; RNA, Small Cytoplasmic; RNA, Transfer, Ala; Sciuridae; Sulfuric Acid Esters

2001
Specific secondary structures in the capsid-coding region of giardiavirus transcript are required for its translation in Giardia lamblia.
    Journal of molecular biology, 2001, May-11, Volume: 308, Issue:4

    Topics: Aldehydes; Animals; Base Pairing; Base Sequence; Butanones; Capsid; CME-Carbodiimide; Gene Expression Regulation, Viral; Giardia lamblia; Giardiavirus; Mutation; Nucleic Acid Conformation; Protein Biosynthesis; RNA Stability; RNA, Messenger; RNA, Viral; Software; Structure-Activity Relationship; Sulfuric Acid Esters; Thermodynamics; Transfection

2001
The brome mosaic virus RNA3 intergenic replication enhancer folds to mimic a tRNA TpsiC-stem loop and is modified in vivo.
    RNA (New York, N.Y.), 2001, Volume: 7, Issue:11

    Topics: Aldehydes; Base Sequence; Bromoviridae; Bromovirus; Butanones; Capsid; Capsid Proteins; CME-Carbodiimide; DNA, Intergenic; Enhancer Elements, Genetic; Molecular Sequence Data; Nucleic Acid Conformation; Phosphorylcholine; Plant Viral Movement Proteins; Pyrimidines; RNA, Transfer; RNA, Viral; Viral Proteins

2001
Top-down characterization of nucleic acids modified by structural probes using high-resolution tandem mass spectrometry and automated data interpretation.
    Analytical chemistry, 2004, May-01, Volume: 76, Issue:9

    Topics: Aldehydes; Automation; Butanones; CME-Carbodiimide; Databases, Factual; HIV-1; Nucleic Acids; Sensitivity and Specificity; Spectrometry, Mass, Electrospray Ionization; Spectroscopy, Fourier Transform Infrared; Sulfuric Acid Esters

2004
Structure of the 5' nontranslated region of the coxsackievirus b3 genome: Chemical modification and comparative sequence analysis.
    Journal of virology, 2007, Volume: 81, Issue:2

    Topics: 5' Untranslated Regions; Aldehydes; Algorithms; Base Sequence; Butanones; CME-Carbodiimide; Enterovirus B, Human; Genome, Viral; Humans; Molecular Sequence Data; Nucleic Acid Conformation; RNA, Viral; Sequence Analysis, DNA; Structure-Activity Relationship; Sulfuric Acid Esters

2007
Probing RNA structure with chemical reagents and enzymes.
    Current protocols in nucleic acid chemistry, 2001, Volume: Chapter 6

    Topics: Aldehydes; Bacteriophage T4; Base Pairing; Biochemistry; Butanones; CME-Carbodiimide; Diethyl Pyrocarbonate; Electrophoresis; Endonucleases; Ethylnitrosourea; Indicators and Reagents; Nucleic Acid Conformation; Phosphorus Radioisotopes; Polynucleotide 5'-Hydroxyl-Kinase; Reference Standards; RNA; Sulfuric Acid Esters

2001