flavin-adenine-dinucleotide and formic-acid

The double proton transfer (DPT) reaction in the hydrated formic acid dimer (FAD) is investigated at molecular-level detail. For this, a global and reactive machine learned (ML) potential energy surface (PES) is developed to run extensive (more than 100 ns) mixed ML/MM molecular dynamics (MD) simulations in explicit molecular mechanics (MM) solvent at MP2-quality for the solute. Simulations with fixed - as in a conventional empirical force field - and conformationally fluctuating - as available from the ML-based PES - charge models for FAD show a significant impact on the competition between DPT and dissociation of FAD into two formic acid monomers. With increasing temperature the barrier height for DPT in solution changes by about 10% (∼1 kcal mol

Topics: Flavin-Adenine Dinucleotide; Formates; Protons; Solvents

Flavins and reduced flavins were reacted with a variety of free radicals produced in dilute aqueous solution at pH 7 +/- 0.1 by radiation chemical methods. The radical .CH2C(CH3)2OH and the aliphatic beta, gamma, and delta radicals of ethanol, 2-propanol, and 1-butanol added to the radical form of flavin adenine dinucleotide (FAD) (FH.) to yield products that could not be reoxidized to flavin by oxygen. The first radical also added to FAD but with a much lower efficiency. In contrast, the alpha-carbon radicals .CH(OH)CH2OH, CH3(-3) CHOH, and (CH3)2COH appeared to undergo two reactions: FH. + RR'COH leads to FH- + RR'C==O FH. + RR'COH leads to FH- + RR'C==O + H+ The formate radical anion .CO2(-) reacted similarly, producing stoichiometric two-electron reduction of riboflavin and lumiflavin as well as FAD. While eaq- also seemed capable of this, it was found to react irreversibly with FADH2, which makes it a poor reagent for producing the dihydroflavin. The dihydro form of FAD was reoxidized to FAD by the species RS. and .BR2(-). In contrast to FAD, the alloxazine lumichrome underwent only one-electron reduction and oxidation by .CO2(-) and .Br2(-), respectively.

Topics: Alcohols; Chemical Phenomena; Chemistry; Flavin-Adenine Dinucleotide; Flavins; Formates; Free Radicals; Oxidation-Reduction; Riboflavin; Spectrometry, Gamma