ethidium has been researched along with oligonucleotides in 67 studies
| Timeframe | Studies, this research(%) | All Research% |
|---|---|---|
| pre-1990 | 29 (43.28) | 18.7374 |
| 1990's | 13 (19.40) | 18.2507 |
| 2000's | 20 (29.85) | 29.6817 |
| 2010's | 4 (5.97) | 24.3611 |
| 2020's | 1 (1.49) | 2.80 |
| Authors | Studies |
|---|---|
| Jain, SC; Sobell, HM; Tsai, CC | 3 |
| Crothers, DM; Davanloo, P | 1 |
| Hassur, SM; Whitlock, HW | 1 |
| Southern, E | 1 |
| Lis, J; Wu, R; Yang, R | 1 |
| Kalisch, BW; van de Sande, JH | 1 |
| Lee, CH; Tinoco, I | 1 |
| Krugh, TR; Reinhardt, CG | 2 |
| Kastrup, RV; Krugh, TR; Young, MA | 1 |
| Nathans, J; Rich, A; van Boom, JH; van der Marel, G; Wang, AH | 1 |
| Luce, R; Sumper, M | 1 |
| Canuel, LL; Patel, DJ | 1 |
| Cramer, SP; Krugh, TR; Wittlin, FN | 1 |
| Dilworth, DD; McCarrey, JR; Sharp, RM | 1 |
| Scrimshaw, BJ | 1 |
| Duhl, DM; Gillespie, DD; Sulser, F | 1 |
| Gottikh, MB; Krynetskaya, NF; Shabarova, ZA | 1 |
| Krugh, TR; Sanford, DG | 1 |
| Coulter, MB; Flintoff, WF; Morgan, AR; Paetkau, VH | 1 |
| Cole, PE; Kramer, FR; Mills, DR; Nishihara, T; Spiegelman, S | 1 |
| Eiden, JJ; Nichols, JL | 1 |
| Coulter, M; Flintoff, W; Morgan, AR; Paetkau, V; Pulleyblank, D | 1 |
| Attardi, G; Ojala, D | 1 |
| Baglioni, C; Maroney, PA; Nilsen, TW; Robertson, HD | 1 |
| Nelson, JW; Tinoco, I | 1 |
| Goppelt, M; Haupt, W; Langowski, J; Maass, G; Mayer, H; Pingoud, A; Urbanke, C | 1 |
| Alkema, D; Bell, RA; Coddington, JM; Hughes, DW; Neilson, T | 1 |
| Delbarre, A; Laugaa, P; Le Pecq, JB; Roques, BP | 1 |
| Dahl, KS; Pardi, A; Tinoco, I | 1 |
| Ikehara, M; Miyamae, A; Shida, T; Uesugi, S | 1 |
| Hunt, CA; Lim, CS | 1 |
| Koshkin, AA; Kutiavin, IV; Lebedev, AV; Lokhov, SG; Mitiakin, MP; Podyminogin, MA | 1 |
| Courtney, SH; Hernández, LI; Kallenbach, NR; Marky, LA; Zhong, M | 1 |
| Carrera, P; Ferrari, M; Gelfi, C; Orsi, A; Righetti, PG; Zanussi, M | 1 |
| Davies, DB; Karawajew, L; Veselkov, AN | 1 |
| Dinter-Gottlieb, G; Duhamel, J; Evilia, C; Fleysh, N; Liu, DM; Lu, P | 1 |
| Chen, YH; Lown, JW; Yang, Y | 1 |
| Kuypers, AW; Lauer, HH; Linssen, PC; Mensink, EJ | 1 |
| Barton, JK; Hall, DB; Kelley, SO | 1 |
| Durand, M; Gondeau, C; Maurizot, JC | 1 |
| Burden, D; Duhamel, GE; Gebhart, CJ; Zhang, P | 1 |
| Ciolkowski, ML; Fang, MM; Lund, ME | 1 |
| Arimondo, PB; Hélène, C; Koeppel, F; Labit, D; Laoui, A; Mailliet, P; Mergny, JL; Petitgenet, O; Riou, JF | 1 |
| Hamdan, II; Skellern, GG; Waigh, RD | 1 |
| Borisova, OF; Jovin, TM; Klement, R; Livshits, MA; Shchyolkina, AK | 1 |
| Hakkinen, T; Jacobs, HT; Spelbrink, JN; Suzuki, T; Toompuu, M; Watanabe, K; Yasukawa, T | 1 |
| Badran, BM; Burny, A; Willard-Gallo, KE; Wolinsky, SM | 1 |
| Chaix, C; Delair, T; Pichot, C; Trimaille, T | 1 |
| Beschetnova, IA; Borisova, OF; Kaluzhny, DN; Livshits, MA; Shchyolkina, AK | 1 |
| Alberti, P; De Pauw, E; Guittat, L; Lacroix, L; Mailliet, P; Mergny, JL; Riou, JF; Rosu, F | 1 |
| Boger, DL; Tse, WC; Yeung, BK | 1 |
| Fink, L; Gessler, T; Jekel, N; Kissel, T; Kleemann, E; Neu, M; Schmehl, T; Seeger, W | 1 |
| Chu, B; He, W; Liang, D; Wan, F; Ying, Q; Zhang, J | 1 |
| Brodbelt, JS; Mazzitelli, CL | 1 |
| Buck, DP; Collins, JG; Keene, FR; Morgan, JL; Smith, JA; Spillane, CB | 1 |
| Bamezai, RN; Bhattacharya, P; Gochhait, S; Sharma, S | 1 |
| Brabec, V; Florian, J; Kostrhunova, H; Novakova, O; Peacock, AF; Sadler, PJ | 1 |
| Jadhav, VM; Maiti, S; Valaske, R | 1 |
| Ashrafi, M; Bathaie, SZ; Hoshyar, R | 1 |
| Chen, MC; Engelhart, AE; Horowitz, ED; Hud, NV; Lynn, DG; Quarles, KA; Smith, MW | 1 |
| Hrdlicka, PJ; Kumar, P; Sau, SP; Sharma, PK | 1 |
| Arya, S; Jain, PK; Navani, NK; Pathania, R; Patil, SD; Sharma, A; Sharma, R | 1 |
| Balvedi, RP; Brito-Madurro, AG; Castro, AC; Madurro, JM | 1 |
| Kondhare, D; Leonard, P; Seela, F; Zhang, A | 1 |
67 other study(ies) available for ethidium and oligonucleotides
| Article | Year |
|---|---|
Drug-nucleic acid interaction: X-ray crystallographic determination of an ethidium-dinucleoside monophosphate crystalline complex, ethidium: 5-iodouridylyl(3'-5')adenosine.
Topics: Adenine Nucleotides; Ethidium; Models, Structural; Nucleic Acid Conformation; Oligonucleotides; Oligoribonucleotides; Solutions; Spectrum Analysis; Uracil Nucleotides; X-Ray Diffraction | 1975 |
Kinetic studies of drug-dinucleotide complexes.
Topics: Chemical Phenomena; Chemistry; Dactinomycin; Ethidium; Kinetics; Oligodeoxyribonucleotides; Oligonucleotides | 1976 |
A gel electrophoresis method for determining the relative binding constants of biologically active, intercalating fluorescent stains.
Topics: Binding Sites; Daunorubicin; Edetic Acid; Electrophoresis, Polyacrylamide Gel; Ethidium; Fluorescent Dyes; Methods; Oligodeoxyribonucleotides; Oligonucleotides; Osmolar Concentration; Spectrophotometry; Time Factors | 1979 |
Gel electrophoresis of restriction fragments.
Topics: DNA; DNA Restriction Enzymes; Electrophoresis; Electrophoresis, Agar Gel; Electrophoresis, Polyacrylamide Gel; Ethidium; Molecular Weight; Nucleic Acid Hybridization; Oligodeoxyribonucleotides; Oligonucleotides | 1979 |
Elution of DNA from agarose gels after electrophoresis.
Topics: Cloning, Molecular; Dialysis; DNA; Electrophoresis; Electrophoresis, Agar Gel; Ethidium; Molecular Weight; Oligodeoxyribonucleotides; Oligonucleotides; Perchlorates; Solubility | 1979 |
The effect of antibiotics on the T4 polynucleotide ligase catalyzed template dependent polymerization of oligodeoxythymidylates.
Topics: Anti-Bacterial Agents; Coliphages; Ethidium; Kinetics; Netropsin; Oligonucleotides; Oligoribonucleotides; Poly dA-dT; Polynucleotide Ligases; Templates, Genetic; Thymidine | 1979 |
Mutagen--oligonucleotide complexes with a bulged base as models for frameshift mutation.
Topics: Circular Dichroism; Ethidium; Magnetic Resonance Spectroscopy; Models, Biological; Mutation; Nucleic Acid Conformation; Oligonucleotides; Oligoribonucleotides; Ribose; Temperature | 1978 |
A comparative study of ethidium bromide complexes with dinucleotides and DNA: direct evidence for intercalation and nucleic acid sequence preferences.
Topics: Base Sequence; Chemical Phenomena; Chemistry; Dactinomycin; DNA; Ethidium; Kinetics; Magnetic Resonance Spectroscopy; Oligonucleotides; Spectrometry, Fluorescence; Structure-Activity Relationship | 1978 |
Ethidium bromide complexes with self-complementary deoxytetranucleotides. Demonstration and discussion of sequence preferences in the intercalative binding of ethidium bromide.
Topics: Base Sequence; Chemical Phenomena; Chemistry; Circular Dichroism; Ethidium; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; Spectrophotometry, Ultraviolet; Structure-Activity Relationship | 1978 |
Molecular structure of a double helical DNA fragment intercalator complex between deoxy CpG and a terpyridine platinum compound.
Topics: Acridines; DNA; Ethidium; Hydrogen Bonding; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; Oligoribonucleotides; Organoplatinum Compounds; X-Ray Diffraction | 1978 |
Phosphorus-31 nuclear magnetic resonance studies of actinomycin D, ethidium bromide, and 9-aminoacridine complexes with dinucleotides.
Topics: Acridines; Chemical Phenomena; Chemistry; Dactinomycin; Ethidium; Magnetic Resonance Spectroscopy; Oligodeoxyribonucleotides; Oligonucleotides; Oligoribonucleotides | 1977 |
Visualization of drug-nucleic acid interactions at atomic resolution. I. Structure of an ethidium/dinucleoside monophosphate crystalline complex, ethidium:5-iodouridylyl (3'-5') adenosine.
Topics: Base Sequence; Binding Sites; Crystallography; Drug Interactions; Ethidium; Models, Molecular; Molecular Conformation; Oligonucleotides; Temperature | 1977 |
Visualization of drug-nucleic acid interactions at atomic resolution. II. Structure of an ethidium/dinucleoside monophosphate crystalline complex, ethidium:5-iodocytidylyl (3'-5') guanosine.
Topics: Base Sequence; Binding Sites; Crystallography; Drug Interactions; Ethidium; Models, Molecular; Molecular Conformation; Nucleic Acid Conformation; Oligonucleotides; Temperature | 1977 |
Evidence for de novo production of self-replicating and environmentally adapted RNA structures by bacteriophage Qbeta replicase.
Topics: Acridines; Autoradiography; Bromides; Centrifugation, Density Gradient; Coliphages; DNA-Directed RNA Polymerases; Electrophoresis; Ethidium; Oligonucleotides; Phosphorus Radioisotopes; Ribonucleases; RNA Viruses; RNA, Viral; Templates, Genetic | 1975 |
Ethidium bromide-(dC-dG-dC-dG)2 complex in solution: intercalation and sequence specificity of drug binding at the tetranucleotide duplex level.
Topics: Ethidium; Magnetic Resonance Spectroscopy; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; Phosphates; Protons; Structure-Activity Relationship; Temperature | 1976 |
Ethidium bromide-dinucleotide complexes. Evidence for intercalation and sequence preferences in binding to double-stranded nucleic acids.
Topics: Binding Sites; Circular Dichroism; DNA; Ethidium; Models, Chemical; Oligonucleotides; RNA | 1975 |
Semiquantitative analysis of X-linked gene expression during spermatogenesis in the mouse: ethidium-bromide staining of RT-PCR products.
Topics: Actins; Animals; Base Sequence; Ethidium; Gene Expression; Genetic Linkage; Male; Mice; Molecular Sequence Data; Oligonucleotides; Polymerase Chain Reaction; RNA; Spermatogenesis; Staining and Labeling; Transcription, Genetic; X Chromosome | 1992 |
A simple nonradioactive procedure for visualization of (dC-dA)n dinucleotide repeat length polymorphisms.
Topics: DNA, Satellite; Electrophoresis, Polyacrylamide Gel; Ethidium; Female; Hemochromatosis; Humans; Male; Oligonucleotides; Polymerase Chain Reaction; Polymorphism, Restriction Fragment Length; Repetitive Sequences, Nucleic Acid | 1992 |
Ethidium bromide fluorescence of 28S ribosomal RNA can be used to normalize samples in northern or dot blots when analyzing small drug-induced changes in specific mRNA.
Topics: Animals; Blotting, Northern; Electrophoresis, Polyacrylamide Gel; Ethidium; Fluorescence; GTP-Binding Proteins; Nucleic Acid Hybridization; Oligonucleotides; Rats; RNA, Messenger; RNA, Ribosomal, 28S; Spectrometry, Fluorescence | 1992 |
Oligonucleotide derivatives resistant to the cell nuclease degradation and effective for the RNA hydrolysis by RNase H.
Topics: Animals; Carcinoma, Krebs 2; Daunorubicin; Escherichia coli; Ethidium; Ethylenediamines; Indicators and Reagents; Mice; Oligonucleotides; Ribonuclease H; Ribonucleases; RNA; RNA, Ribosomal, 5S; Substrate Specificity | 1991 |
N-acetoxy-2-acetylaminofluorene modification of a deoxyoligonucleotide duplex.
Topics: 2-Acetylaminofluorene; Acetoxyacetylaminofluorene; Chemical Phenomena; Chemistry; Circular Dichroism; Ethidium; Guanine; Hot Temperature; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligodeoxyribonucleotides; Oligonucleotides | 1985 |
Enzymatic synthesis of deoxyribonucleic acids with repeating sequences. A new repeating trinucleotide deoxyribonucleic acid, d(T-C-C)n-d(G-G-A)n.
Topics: Adenine Nucleotides; Base Sequence; Carbon Radioisotopes; Cytosine Nucleotides; Deoxyribonucleotides; DNA; DNA Nucleotidyltransferases; DNA Replication; DNA-Directed RNA Polymerases; Escherichia coli; Ethidium; Guanine Nucleotides; Kinetics; Micrococcal Nuclease; Models, Chemical; Molecular Weight; Oligonucleotides; Phosphoric Diester Hydrolases; Phosphorus Radioisotopes; Spleen; Thymine Nucleotides; Tritium | 1974 |
Evolution in vitro: sequence and phenotype of a mutant RNA resistant to ethidium bromide.
Topics: Base Sequence; Biological Evolution; Coliphages; DNA-Directed RNA Polymerases; Ethidium; Kinetics; Mutation; Oligonucleotides; Pancreas; Ribonucleases; RNA Viruses; RNA, Viral; Selection, Genetic | 1974 |
Characterization of poly(riboadenylic acid) segments in L-cell messenger ribonucleic acid.
Topics: Adenosine Monophosphate; Animals; Base Sequence; Centrifugation, Density Gradient; Chromatography, Affinity; Dactinomycin; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Ethidium; L Cells; Mice; Molecular Weight; Oligonucleotides; Osmolar Concentration; Pancreas; Phosphorus Radioisotopes; Ribonucleases; Ribonucleotides; RNA Viruses; RNA, Messenger; RNA, Transfer; Tritium | 1973 |
In vitro synthesis and detection of deoxyribonucleic acids with covalently linked complementary sequences.
Topics: Bacterial Proteins; Base Sequence; Carbodiimides; Carbon Radioisotopes; Centrifugation, Density Gradient; Chemical Phenomena; Chemistry; Deoxyribonucleotides; DNA; DNA Nucleotidyltransferases; DNA Replication; DNA-Directed RNA Polymerases; DNA, Bacterial; Electrophoresis; Endonucleases; Escherichia coli; Ethidium; Guanine; Kinetics; Oligonucleotides; Spectrometry, Fluorescence; Templates, Genetic; Thymine; Tritium | 1974 |
Expression of the mitochondrial genome in HeLa cells. XIX. Occurrence in mitochondria of polyadenylic acid sequences, "free" and covalently linked to mitochondrial DNA-coded RNA.
Topics: Adenosine; Adenosine Monophosphate; Base Sequence; Carbon Radioisotopes; Centrifugation, Density Gradient; Chromatography; Chromosomes; Dactinomycin; DNA, Mitochondrial; Ethidium; Genetic Code; HeLa Cells; Humans; Mitochondria; Molecular Weight; Nucleic Acid Hybridization; Oligonucleotides; Polynucleotides; Ribonucleases; RNA; RNA, Messenger; RNA, Ribosomal; Tritium; Uridine | 1974 |
Heterogeneous nuclear RNA promotes synthesis of (2',5')oligoadenylate and is cleaved by the (2',5')oligoadenylate-activated endoribonuclease.
Topics: 2',5'-Oligoadenylate Synthetase; Adenine Nucleotides; Adenosine Triphosphate; Deoxyadenine Nucleotides; Endonucleases; Ethidium; HeLa Cells; Humans; Interferons; Nucleotidyltransferases; Oligonucleotides; Oligoribonucleotides; Ribonuclease III; Ribonucleases; RNA, Double-Stranded; RNA, Heterogeneous Nuclear; RNA, Messenger | 1982 |
Intercalation of ethidium ion into DNA and RNA oligonucleotides.
Topics: DNA; Ethidium; Models, Genetic; Nucleic Acid Denaturation; Oligodeoxyribonucleotides; Oligonucleotides; Oligoribonucleotides; RNA | 1984 |
The effect of several nucleic acid binding drugs on the cleavage of d(GGAATTCC) and pBR 322 by the Eco RI restriction endonuclease.
Topics: Circular Dichroism; Dactinomycin; Distamycins; DNA Restriction Enzymes; Ethidium; Kinetics; Mathematics; Molecular Conformation; Netropsin; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; Plasmids; Proflavine | 1981 |
1H-nuclear magnetic resonance of intercalators and rGCA: a potential mutagenicity probe.
Topics: Acridine Orange; Acriflavine; Aminacrine; Aminoacridines; Ethidium; Intercalating Agents; Magnetic Resonance Spectroscopy; Mutagenicity Tests; Oligonucleotides; Oligoribonucleotides; Proflavine; Protons; Temperature | 1984 |
Comparative binding of ethidium and three azido analogs to dinucleotides: affinity and intercalation geometry. A 1H NMR and visible spectroscopy study.
Topics: Azo Compounds; Binding Sites; Ethidium; Magnetic Resonance Spectroscopy; Models, Chemical; Oligonucleotides; Oligoribonucleotides; Spectrophotometry; Thermodynamics | 1983 |
Structural effects on the circular dichroism of ethidium ion-nucleic acid complexes.
Topics: Animals; Cattle; Circular Dichroism; Dinucleoside Phosphates; DNA; Ethidium; Mathematics; Oligonucleotides; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet | 1982 |
Interactions between oligonucleotides having a left-handed helical structure and ethidium bromide.
Topics: Chemical Phenomena; Chemistry; Circular Dichroism; Ethidium; Nucleic Acid Conformation; Oligonucleotides; Oligoribonucleotides; Structure-Activity Relationship | 1980 |
Sequential staining of short oligonucleotides in polyacrylamide gels with ethidium bromide and methylene blue.
Topics: Acrylic Resins; Base Sequence; Ethidium; Methylene Blue; Molecular Sequence Data; Oligonucleotides; Staining and Labeling | 1994 |
[Effect of the intercalating dyes ethidium and phenazine, covalently jointed to the 5'- or 3'-end of the pentanucleotide d(pGAAAG), on the thermodynamics of complementary and cooperative interaction].
Topics: Base Sequence; Coloring Agents; Ethidium; Hot Temperature; Intercalating Agents; Molecular Sequence Data; Oligonucleotides; Phenazines; Thermodynamics | 1995 |
Equilibrium analysis of ethidium binding to DNA containing base mismatches and branches.
Topics: Base Composition; Base Sequence; Binding Sites; Calorimetry; Chromatography, High Pressure Liquid; Densitometry; DNA; DNA Repair; DNA Replication; DNA, Recombinant; Electrophoresis, Polyacrylamide Gel; Ethidium; Kinetics; Molecular Sequence Data; Oligonucleotides; Osmium Tetroxide; Spectrometry, Fluorescence; Titrimetry | 1994 |
Capillary zone electrophoresis in polymer networks of polymerase chain reaction-amplified oligonucleotides: the case of congenital adrenal hyperplasia.
Topics: Adrenal Hyperplasia, Congenital; Base Sequence; Capillary Action; DNA; Electrophoresis, Polyacrylamide Gel; Ethidium; Gene Deletion; Humans; Molecular Sequence Data; Oligonucleotides; Polymerase Chain Reaction; Polymers; Steroid 21-Hydroxylase | 1994 |
1H-NMR structural analysis of ethidium bromide complexation with self-complementary deoxytetranucleotides 5'-d(ApCpGpT), 5'-d(ApGpCpT), and 5'-d(TpGpCpA) in aqueous solution.
Topics: Base Sequence; Ethidium; Magnetic Resonance Spectroscopy; Molecular Sequence Data; Oligonucleotides; Protons; Solutions; Trypanocidal Agents; Water | 1996 |
Secondary structure content of the HDV ribozyme in 95% formamide.
Topics: Base Sequence; Ethidium; Formamides; Hepatitis Delta Virus; Kinetics; Magnetic Resonance Spectroscopy; Molecular Sequence Data; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; RNA, Catalytic; RNA, Double-Stranded; Spectrometry, Fluorescence; Thermodynamics | 1996 |
Optimization of cross-linked lexitropsins.
Topics: Circular Dichroism; Cross-Linking Reagents; Ethidium; Fluorometry; Models, Chemical; Models, Molecular; Netropsin; Oligonucleotides; Titrimetry | 1996 |
Contamination-free and automated composition of a reaction mixture for nucleic acid amplification using a capillary electrophoresis apparatus.
Topics: Autoanalysis; DNA; Drug Contamination; Electrophoresis, Agar Gel; Electrophoresis, Capillary; Ethidium; False Positive Reactions; Genes, ras; Indicators and Reagents; Nucleic Acids; Oligonucleotides; Polymerase Chain Reaction | 1998 |
Long-range and short-range oxidative damage to DNA: photoinduced damage to guanines in ethidium-DNA assemblies.
Topics: Alkylation; Chromatography, High Pressure Liquid; DNA Adducts; DNA Damage; Electron Transport; Ethidium; Guanine; Intercalating Agents; Oligonucleotides; Oxidants; Oxygen; Photochemistry; Solvents | 1998 |
Spectroscopic studies on ethidium bromide binding to intramolecular parallel and antiparallel triple helices containing T*A:T and G*G:C triplets.
Topics: Base Sequence; Circular Dichroism; DNA; Ethidium; Indicators and Reagents; Intercalating Agents; Magnesium Chloride; Molecular Sequence Data; Oligonucleotides; Spectrometry, Fluorescence; Temperature; Ultraviolet Rays | 2000 |
Improved diagnosis of porcine proliferative enteropathy caused by Lawsonia intracellularis using polymerase chain reaction-enzyme-linked oligosorbent assay (PCR-ELOSA).
Topics: Animals; Blotting, Southern; Electrophoresis, Agar Gel; Enzymes; Ethidium; Gram-Negative Bacterial Infections; Lawsonia Bacteria; Oligonucleotides; Polymerase Chain Reaction; Protein-Losing Enteropathies; Reproducibility of Results; Sensitivity and Specificity; Swine; Swine Diseases | 2000 |
A surface plasmon resonance method for detecting multiple modes of DNA-ligand interactions.
Topics: Biotin; Dactinomycin; DNA; DNA Probes; Ethidium; Indoles; Intercalating Agents; Ligands; Oligonucleotides; Spermine; Surface Plasmon Resonance | 2000 |
Ethidium derivatives bind to G-quartets, inhibit telomerase and act as fluorescent probes for quadruplexes.
Topics: DNA; Ethidium; Fluorescent Dyes; Guanine; Humans; Nucleic Acid Conformation; Oligonucleotides; Spectrometry, Fluorescence; Telomerase; Telomere | 2001 |
Ligand binding to oligonucleotides.
Topics: Antiviral Agents; Bisbenzimidazole; Dactinomycin; Distamycins; DNA; Electrophoresis, Capillary; Ethidium; Fluorescent Dyes; Hydrogen-Ion Concentration; Intercalating Agents; Ligands; Molecular Structure; Netropsin; Nucleic Acid Synthesis Inhibitors; Oligonucleotides | 2001 |
The telomeric dG(GT)4G sequence can adopt a parallel-stranded double helical conformation.
Topics: Base Pairing; Circular Dichroism; Ethidium; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Repetitive Sequences, Nucleic Acid; Telomere; Thermodynamics | 2001 |
The 7472insC mitochondrial DNA mutation impairs the synthesis and extent of aminoacylation of tRNASer(UCN) but not its structure or rate of turnover.
Topics: Base Sequence; DNA; DNA, Mitochondrial; Ethidium; Genotype; Guanosine; Hearing Loss, Sensorineural; Humans; Kinetics; Models, Genetic; Molecular Sequence Data; Mutation; Nucleic Acid Conformation; Oligonucleotides; Oxygen; Phenotype; Protein Biosynthesis; Protein Conformation; RNA; RNA Processing, Post-Transcriptional; RNA, Transfer; RNA, Transfer, Ser; Sequence Analysis, DNA; Time Factors; Transcription, Genetic; Tumor Cells, Cultured | 2002 |
Identification of three NFAT binding motifs in the 5'-upstream region of the human CD3gamma gene that differentially bind NFATc1, NFATc2, and NF-kappa B p50.
Topics: 5' Untranslated Regions; Amino Acid Motifs; Base Sequence; Binding, Competitive; CD3 Complex; Cell Line; Cell Nucleus; Cyclosporine; DNA; DNA Mutational Analysis; DNA-Binding Proteins; Dose-Response Relationship, Drug; Ethidium; Flow Cytometry; HIV-1; Humans; Molecular Sequence Data; Mutation; NF-kappa B; NF-kappa B p50 Subunit; NFATC Transcription Factors; Nuclear Proteins; Oligonucleotides; Protein Binding; Reverse Transcriptase Polymerase Chain Reaction; RNA, Messenger; Time Factors; Transcription Factor AP-1; Transcription Factors | 2002 |
Polymer functionalized submicrometric emulsions as potential synthetic DNA vectors.
Topics: Adsorption; DNA; Dose-Response Relationship, Drug; Emulsions; Ethidium; Genetic Vectors; Intercalating Agents; Models, Chemical; Nucleic Acid Conformation; Oligonucleotides; Plasmids; Polymers; Protein Binding | 2003 |
Ethidium probing of the parallel double- and four-stranded structures formed by the telomeric DNA sequences dG(GT)4G and d(GT)5.
Topics: Animals; Base Sequence; DNA; Ethidium; Fluorescent Dyes; G-Quadruplexes; Guanine; Molecular Sequence Data; Oligonucleotides; Spectrophotometry, Ultraviolet; Telomere; Temperature; Thermodynamics; Thymine | 2003 |
Selective interaction of ethidium derivatives with quadruplexes: an equilibrium dialysis and electrospray ionization mass spectrometry analysis.
Topics: Binding Sites; Dialysis; DNA; Enzyme Inhibitors; Ethidium; Fluorescence Resonance Energy Transfer; Fluorescent Dyes; Humans; Ligands; Molecular Structure; Nucleic Acid Conformation; Oligonucleotides; Spectrometry, Mass, Electrospray Ionization; Telomerase; Telomere; Tumor Cells, Cultured | 2003 |
Determination of binding affinities of triplex forming oligonucleotides using a fluorescent intercalator displacement (FID) assay.
Topics: Algorithms; Chemical Phenomena; Chemistry, Physical; DNA; Ethidium; Fluorescent Dyes; Hydrogen-Ion Concentration; Intercalating Agents; Kinetics; Nucleic Acid Conformation; Oligonucleotides; Structure-Activity Relationship | 2003 |
Nano-carriers for DNA delivery to the lung based upon a TAT-derived peptide covalently coupled to PEG-PEI.
Topics: Animals; Bronchoalveolar Lavage Fluid; Chemical Phenomena; Chemistry, Physical; DNA; Drug Carriers; Drug Delivery Systems; Epithelial Cells; Ethidium; Gene Products, tat; Genes, Reporter; Genetic Therapy; Heparin; Humans; Luciferases; Lung; Mice; Nanostructures; Nuclease Protection Assays; Oligonucleotides; Polyethylene Glycols; Polyethyleneimine; Tissue Distribution; Transfection | 2005 |
Fast separation of single-stranded oligonucleotides by capillary electrophoresis using OliGreen as fluorescence inducing agent.
Topics: Buffers; DNA, Single-Stranded; Electrophoresis, Capillary; Ethidium; Fluorescent Dyes; Oligonucleotides; Poloxamer; Sensitivity and Specificity; Urea | 2005 |
Probing ligand binding to duplex DNA using KMnO4 reactions and electrospray ionization tandem mass spectrometry.
Topics: Base Sequence; Benzimidazoles; Binding Sites; Dactinomycin; DNA; Echinomycin; Ethidium; Ligands; Oligonucleotides; Oxidation-Reduction; Pharmaceutical Preparations; Potassium Permanganate; Spectrometry, Mass, Electrospray Ionization; Thymine | 2007 |
Dinuclear ruthenium(ii) complexes with flexible bridges as non-duplex DNA binding agents.
Topics: Base Sequence; Benzothiazoles; DNA; Ethidium; Fluorescence; Fluorescent Dyes; Indoles; Intercalating Agents; Magnetic Resonance Spectroscopy; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Organometallic Compounds; Phenanthrolines; Pyridines; Quinolines; Ruthenium | 2007 |
Biophysical characterization of double-stranded oligonucleotides using ETBR and isothermal fluorescence spectroscopy: implication for SNP genotyping.
Topics: Apoptosis Regulatory Proteins; Biophysical Phenomena; Biophysics; BRCA2 Protein; Circular Dichroism; Ethidium; Genotype; Humans; Oligonucleotides; Polymorphism, Single Nucleotide; Spectrometry, Fluorescence; Temperature; Thermodynamics | 2008 |
DNA interactions of monofunctional organometallic osmium(II) antitumor complexes in cell-free media.
Topics: Antineoplastic Agents; Cell Line, Tumor; Cell-Free System; Cisplatin; DNA; DNA Adducts; DNA, Superhelical; Drug Resistance, Neoplasm; Drug Screening Assays, Antitumor; Ethidium; Fluorescent Dyes; Humans; Intercalating Agents; Molecular Conformation; Oligonucleotides; Organometallic Compounds; Osmium; Spectrometry, Fluorescence; Structure-Activity Relationship; Transition Temperature | 2008 |
Interaction between 14mer DNA oligonucleotide and cationic surfactants of various chain lengths.
Topics: Cations; Cetrimonium; Cetrimonium Compounds; Circular Dichroism; DNA; Electrophoretic Mobility Shift Assay; Ethidium; Fluorescent Dyes; Oligonucleotides; Spectrophotometry, Ultraviolet; Surface Properties; Surface-Active Agents; Temperature; Trimethyl Ammonium Compounds | 2008 |
Interaction of safranal and picrocrocin with ctDNA and their preferential mechanisms of binding to GC- and AT-rich oligonucleotides.
Topics: Aldehydes; AT Rich Sequence; Binding Sites; Cyclohexenes; DNA; Ethidium; GC Rich Sequence; Glucosides; Models, Biological; Monoterpenes; Nucleic Acid Conformation; Oligonucleotides; Substrate Specificity; Terpenes | 2008 |
Intercalation as a means to suppress cyclization and promote polymerization of base-pairing oligonucleotides in a prebiotic world.
Topics: Base Pairing; Ethidium; Evolution, Molecular; Intercalating Agents; Models, Chemical; Nucleic Acid Conformation; Oligonucleotides; Origin of Life; RNA; Thermodynamics | 2010 |
Fluorescent intercalator displacement replacement (FIDR) assay: determination of relative thermodynamic and kinetic parameters in triplex formation--a case study using triplex-forming LNAs.
Topics: DNA; Ethidium; Fluorescent Dyes; Fluorometry; Intercalating Agents; Kinetics; Models, Chemical; Oligonucleotides; Thermodynamics | 2012 |
Identification of novel regulatory small RNAs in Acinetobacter baumannii.
Topics: Acinetobacter baumannii; Algorithms; Blotting, Northern; Computational Biology; Drug Resistance, Bacterial; Ethidium; Gene Expression Profiling; Gene Expression Regulation; Oligonucleotides; Real-Time Polymerase Chain Reaction; RNA, Small Untranslated | 2014 |
Detection of a specific biomarker for Epstein-Barr virus using a polymer-based genosensor.
Topics: Aniline Compounds; Biomarkers; Biosensing Techniques; Coordination Complexes; DNA, Viral; Electrochemical Techniques; Electrodes; Ethidium; Herpesvirus 4, Human; Humans; Nucleic Acid Hybridization; Oligonucleotides; Polymers; Sulfhydryl Compounds | 2014 |
Anomeric DNA Strand Displacement with α-D Oligonucleotides as Invaders and Ethidium Bromide as Fluorescence Sensor for Duplexes with α/β-, β/β- and α/α-D Configuration.
Topics: DNA; DNA, Single-Stranded; Ethidium; Nanotechnology; Oligonucleotides | 2022 |