Page last updated: 2024-08-17

dimethyl sulfate and potassium permanganate

dimethyl sulfate has been researched along with potassium permanganate in 22 studies

Research

Studies (22)

TimeframeStudies, this research(%)All Research%
pre-19902 (9.09)18.7374
1990's13 (59.09)18.2507
2000's6 (27.27)29.6817
2010's1 (4.55)24.3611
2020's0 (0.00)2.80

Authors

AuthorsStudies
Borowiec, JA; SenGupta, DJ1
Gutowski, JC; Schreier, HJ1
Beatty, LG; Panigrahi, GB; Sadowski, PD1
Gralla, JD; Sasse-Dwight, S1
Austin, S; Dixon, RA; Minchin, SD1
Nielsen, PE1
Buchardt, O; Egholm, M; Nielsen, PE1
Balagurumoorthy, P; Brahmachari, SK1
Chiu, SK; Radding, CM; Rao, BJ; Story, RM1
Mirkovitch, J1
Capaccio, L; Cingolani, G; D'Elia, D; Gadaleta, G1
Farah, JA; Smith, GR1
Barrios, H; Grande, R; Morett, E; Olvera, L1
Chen, HH; Komura, J; Pfeifer, GP; Riggs, AD1
Zaret, KS1
Castonguay, A; Cloutier, JF; Drouin, R; O'Connor, TR1
Burderi, L; Camier, S; Carlucci, P; Costanzo, G; Negri, R1
Nagaraja, V; Sikder, D1
Bentin, T; Hansen, GI; Nielsen, PE1
Chasson, L; Ferrier, P; Kumar, S; Payet-Bornet, D; Spicuglia, S1
Fujita, H; Haga, K; Harabayashi, T; Kuzumaki, N; Nakagawa, K; Nomoto, M; Nonomura, K; Sazawa, A; Shinohara, N; Takimoto, M1
Fox, KR; Sekibo, DAT1

Reviews

1 review(s) available for dimethyl sulfate and potassium permanganate

ArticleYear
In vivo footprinting: studies of protein--DNA interactions in gene regulation.
    BioEssays : news and reviews in molecular, cellular and developmental biology, 1989, Volume: 11, Issue:5

    Topics: Alkylating Agents; Base Sequence; DNA; DNA Probes; Furocoumarins; Gene Expression Regulation; Molecular Sequence Data; Osmium Tetroxide; Potassium Permanganate; Protein Binding; Sulfuric Acid Esters; Ultraviolet Rays

1989

Other Studies

21 other study(ies) available for dimethyl sulfate and potassium permanganate

ArticleYear
Strand-specific recognition of a synthetic DNA replication fork by the SV40 large tumor antigen.
    Science (New York, N.Y.), 1992, Jun-19, Volume: 256, Issue:5064

    Topics: Adenosine Triphosphate; Antigens, Polyomavirus Transforming; Diethyl Pyrocarbonate; DNA Helicases; DNA Replication; DNA, Single-Stranded; Dose-Response Relationship, Drug; Electrophoresis, Polyacrylamide Gel; Ethylnitrosourea; Formates; Potassium Permanganate; Sulfuric Acid Esters; Time Factors

1992
Interaction of the Bacillus subtilis glnRA repressor with operator and promoter sequences in vivo.
    Journal of bacteriology, 1992, Volume: 174, Issue:3

    Topics: Bacillus subtilis; Base Sequence; Binding Sites; DNA-Binding Proteins; Gene Expression Regulation, Bacterial; Glutamate-Ammonia Ligase; Guanine; Methylation; Molecular Sequence Data; Operator Regions, Genetic; Potassium Permanganate; Promoter Regions, Genetic; Pyrimidines; Regulatory Sequences, Nucleic Acid; Repressor Proteins; Sulfuric Acid Esters

1992
The FLP protein contacts both major and minor grooves of its recognition target sequence.
    Nucleic acids research, 1992, Nov-25, Volume: 20, Issue:22

    Topics: 4-Hydroxyaminoquinoline-1-oxide; Base Sequence; Binding Sites; DNA Nucleotidyltransferases; DNA, Fungal; DNA, Single-Stranded; Fungal Proteins; Guanine; Methylation; Molecular Sequence Data; Potassium Permanganate; Restriction Mapping; Saccharomyces cerevisiae; Substrate Specificity; Sulfuric Acid Esters; Thymine

1992
Footprinting protein-DNA complexes in vivo.
    Methods in enzymology, 1991, Volume: 208

    Topics: Chromatography, Gel; Chromosomes, Bacterial; DNA; DNA-Binding Proteins; DNA, Bacterial; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Indicators and Reagents; Oligodeoxyribonucleotides; Plasmids; Polymerase Chain Reaction; Potassium Permanganate; Sulfuric Acid Esters

1991
Transcriptional activation of the Klebsiella pneumoniae nifLA promoter by NTRC is face-of-the-helix dependent and the activator stabilizes the interaction of sigma 54-RNA polymerase with the promoter.
    The EMBO journal, 1989, Volume: 8, Issue:11

    Topics: Bacterial Proteins; Base Sequence; Chromosome Mapping; DNA-Binding Proteins; DNA-Directed RNA Polymerases; Genes, Bacterial; Klebsiella pneumoniae; Molecular Sequence Data; Nitrogen Fixation; Phosphorylation; PII Nitrogen Regulatory Proteins; Plasmids; Potassium Permanganate; Promoter Regions, Genetic; Sigma Factor; Sulfuric Acid Esters; Trans-Activators; Transcription Factors; Transcription, Genetic

1989
Evidence for (PNA)2/DNA triplex structure upon binding of PNA to dsDNA by strand displacement.
    Journal of molecular recognition : JMR, 1994, Volume: 7, Issue:3

    Topics: Base Sequence; Cytosine; DNA; Guanine; Hydrogen Bonding; Hydrogen-Ion Concentration; Molecular Sequence Data; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotide Probes; Plasmids; Potassium Permanganate; Pyrimidine Nucleotides; Sulfuric Acid Esters

1994
Structure and stability of human telomeric sequence.
    The Journal of biological chemistry, 1994, Aug-26, Volume: 269, Issue:34

    Topics: Circular Dichroism; Diethyl Pyrocarbonate; Humans; Hydrogen Bonding; Models, Molecular; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Potassium; Potassium Permanganate; Repetitive Sequences, Nucleic Acid; Sodium; Sulfuric Acid Esters; Telomere; Thermodynamics

1994
Interactions of three strands in joints made by RecA protein.
    Biochemistry, 1993, Dec-07, Volume: 32, Issue:48

    Topics: Bacteriophage M13; Base Sequence; Diethyl Pyrocarbonate; DNA; DNA, Viral; Hydrogen Bonding; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Potassium Permanganate; Rec A Recombinases; Sulfuric Acid Esters

1993
Mapping DNA-protein interactions in cells and nuclei: genomic sequencing by template purification.
    Methods in enzymology, 1995, Volume: 254

    Topics: Animals; Cell Fractionation; Cell Nucleus; Cells, Cultured; Deoxyribonuclease I; DNA; DNA-Binding Proteins; Genome; HeLa Cells; Humans; Indicators and Reagents; Leukocytes; Mutagenesis; Mutagens; Polymerase Chain Reaction; Potassium Permanganate; RNA Probes; Sulfuric Acid Esters; Templates, Genetic

1995
In organello footprinting analysis of rat mitochondrial DNA: protein interaction upstream of the Ori-L.
    Biochemical and biophysical research communications, 1997, Feb-24, Volume: 231, Issue:3

    Topics: Animals; Base Sequence; Deoxyribonucleoproteins; DNA Footprinting; DNA Replication; DNA-Binding Proteins; DNA, Mitochondrial; Mitochondria, Liver; Molecular Weight; Nucleic Acid Conformation; Potassium Permanganate; Protein Binding; Rats; Sulfuric Acid Esters

1997
The RecBCD enzyme initiation complex for DNA unwinding: enzyme positioning and DNA opening.
    Journal of molecular biology, 1997, Oct-10, Volume: 272, Issue:5

    Topics: Adenosine Triphosphate; Deoxyribonuclease I; DNA; DNA Footprinting; DNA Helicases; DNA, Single-Stranded; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Exodeoxyribonuclease V; Exodeoxyribonucleases; Hydrazines; Hydroxyl Radical; Magnesium; Models, Chemical; Nucleic Acid Conformation; Potassium Permanganate; Sulfuric Acid Esters

1997
In vivo genomic footprinting analysis reveals that the complex Bradyrhizobium japonicum fixRnifA promoter region is differently occupied by two distinct RNA polymerase holoenzymes.
    Proceedings of the National Academy of Sciences of the United States of America, 1998, Feb-03, Volume: 95, Issue:3

    Topics: Bacterial Proteins; Base Sequence; Chromosome Mapping; DNA Footprinting; DNA Methylation; DNA-Directed RNA Polymerases; DNA, Bacterial; Isomerism; Molecular Sequence Data; Mutagenesis; Oxidoreductases; Potassium Permanganate; Promoter Regions, Genetic; Rhizobiaceae; Sulfuric Acid Esters; Transcription Factors

1998
Chromatin structure analysis by ligation-mediated and terminal transferase-mediated polymerase chain reaction.
    Methods in enzymology, 1999, Volume: 304

    Topics: CDC2 Protein Kinase; Cells, Cultured; Chromatin; Deoxyribonuclease I; DNA; DNA Footprinting; DNA Methylation; DNA Nucleotidylexotransferase; DNA Primers; Electrophoresis, Agar Gel; Electrophoresis, Polyacrylamide Gel; Fibroblasts; HeLa Cells; Humans; Indicators and Reagents; Polymerase Chain Reaction; Potassium Permanganate; Sulfuric Acid Esters

1999
In vivo analysis of chromatin structure.
    Methods in enzymology, 1999, Volume: 304

    Topics: Animals; Cell Membrane Permeability; Cell Nucleus; Chromatin; Cross-Linking Reagents; Deoxyribonuclease I; DNA; Indicators and Reagents; Nucleosomes; Polymerase Chain Reaction; Potassium Permanganate; Restriction Mapping; Sulfuric Acid Esters; Ultraviolet Rays

1999
Alkylating agent and chromatin structure determine sequence context-dependent formation of alkylpurines.
    Journal of molecular biology, 2001, Feb-16, Volume: 306, Issue:2

    Topics: Alkylating Agents; Alkylation; Base Sequence; Cell Line, Transformed; Chromatin; Dimethyl Sulfoxide; DNA; DNA Damage; DNA Footprinting; DNA Methylation; Exons; Fragile X Mental Retardation Protein; Guanine; Humans; Lymphocytes; Molecular Conformation; Molecular Sequence Data; Nerve Tissue Proteins; Piperidines; Potassium Permanganate; Promoter Regions, Genetic; Purines; RNA-Binding Proteins; Sulfones; Sulfuric Acid Esters

2001
RNA polymerase III transcription complexes on chromosomal 5S rRNA genes in vivo: TFIIIB occupancy and promoter opening.
    Molecular and cellular biology, 2001, Volume: 21, Issue:9

    Topics: Base Sequence; Chromosomes, Fungal; Deoxyadenine Nucleotides; DNA Footprinting; DNA, Fungal; Molecular Sequence Data; Potassium Permanganate; Promoter Regions, Genetic; RNA Polymerase III; RNA, Fungal; RNA, Ribosomal, 5S; Saccharomyces cerevisiae; Sulfuric Acid Esters; Transcription Factor TFIIIB; Transcription Factors; Transcription, Genetic; Ultraviolet Rays

2001
A novel bipartite mode of binding of M. smegmatis topoisomerase I to its recognition sequence.
    Journal of molecular biology, 2001, Sep-14, Volume: 312, Issue:2

    Topics: Base Sequence; Binding Sites; Deoxyribonuclease I; DNA; DNA Footprinting; DNA Methylation; DNA Topoisomerases, Type I; DNA-Binding Proteins; Models, Molecular; Mycobacterium; Nucleic Acid Conformation; Phosphates; Potassium Permanganate; Protein Binding; Rotation; Static Electricity; Substrate Specificity; Sulfuric Acid Esters

2001
Measurement of PNA binding to double-stranded DNA.
    Methods in molecular biology (Clifton, N.J.), 2002, Volume: 208

    Topics: DNA; Electrophoretic Mobility Shift Assay; Molecular Biology; Molecular Probes; Peptide Nucleic Acids; Potassium Permanganate; Sulfuric Acid Esters

2002
Potassium permanganate as a probe to map DNA-protein interactions in vivo.
    Journal of biochemical and biophysical methods, 2004, May-31, Volume: 59, Issue:2

    Topics: Animals; Base Sequence; DNA; DNA Footprinting; Mice; Molecular Sequence Data; Potassium Permanganate; Promoter Regions, Genetic; Protein Binding; Proteins; Sulfuric Acid Esters; Thymus Gland

2004
Gelsolin gene silencing involving unusual hypersensitivities to dimethylsulfate and KMnO4 in vivo footprinting on its promoter region.
    International journal of cancer, 2004, Oct-10, Volume: 111, Issue:6

    Topics: Base Sequence; Chromatin; DNA Footprinting; DNA Methylation; Down-Regulation; Gelsolin; Gene Expression Regulation, Neoplastic; Gene Silencing; Humans; Molecular Sequence Data; Mutagens; Polymerase Chain Reaction; Potassium Permanganate; Precipitin Tests; Promoter Regions, Genetic; Sulfuric Acid Esters; Transcription, Genetic; Tumor Cells, Cultured; Urinary Bladder Neoplasms

2004
The effects of DNA supercoiling on G-quadruplex formation.
    Nucleic acids research, 2017, Dec-01, Volume: 45, Issue:21

    Topics: Circular Dichroism; DNA, Superhelical; Fungal Proteins; G-Quadruplexes; Inverted Repeat Sequences; Potassium Permanganate; Single-Strand Specific DNA and RNA Endonucleases; Sulfuric Acid Esters

2017