diethyl pyrocarbonate and dimethyl sulfate

diethyl pyrocarbonate has been researched along with dimethyl sulfate in 37 studies

Research

Studies (37)

TimeframeStudies, this research(%)All Research%
pre-199013 (35.14)18.7374
1990's16 (43.24)18.2507
2000's7 (18.92)29.6817
2010's1 (2.70)24.3611
2020's0 (0.00)2.80

Authors

AuthorsStudies
Borowiec, JA; SenGupta, DJ1
Grivell, LA; Hogeweg, P; Konings, DA; Kwakman, JH; Pel, HJ1
Collier, DA; Helene, C; Mergny, JL; Thuong, NT1
Jaeger, JA; Turner, DH; Zuker, M1
Bach, M; Carbon, P; Ebel, JP; Krol, A; Lührmann, R; Westhof, E1
Fox, KR; Grigg, GW1
Ebel, JP; Giege, R; Grunberg-Manago, M; Springer, M; Theobald, A1
Noller, HF; Van Stolk, BJ1
Buc, H; Buckle, M1
Heuer, C; Hillen, W1
Leng, M; Malfoy, B; Rousseau, N; Vogt, N1
Johnston, BH1
McLean, MJ; Waring, MJ1
Belotserkovskii, BP; Frank-Kamenetskii, MD; Lyamichev, VI; Mirkin, SM; Voloshin, ON1
Gilbert, W; Peattie, DA1
Herr, W; Peattie, DA1
Christensen, A; Douthwaite, S; Garrett, RA1
Liu, W; Lo, AC; Nazar, RN1
Dallmann, HG; Dunn, SD1
Hayashi, N; Hirao, I; Kawai, G; Kumazawa, Y; Miura, K; Nishikawa, K; Ueda, T; Watanabe, K; Watanabe, Y; Yokogawa, T1
Burke, JM; Butcher, SE1
Cocito, C; Di Giambattista, M; Vannuffel, P1
Bach, C; Baudin, F; Cusack, S; Ruigrok, RW1
Balagurumoorthy, P; Brahmachari, SK1
Chiu, SK; Radding, CM; Rao, BJ; Story, RM1
Azorín, F; Huertas, D1
Bernal, JJ; García-Arenal, F1
Florentz, C; Giegé, R; Lapointe, J; Madore, E1
Clarke, PA1
Saha, T; Usdin, K1
Caprara, MG; Lambowitz, AM; Myers, CA1
Chinnapen, DJ; Sen, D1
Gray, DM; Wen, JD1
Bebenroth, D; Jäschke, A; Keiper, S; Seelig, B; Westhof, E1
He, Y; Neumann, RD; Panyutin, IG1
Engelke, DR; Ziehler, WA1
Agalarov, SCh; Shirokikh, NE; Spirin, AS1

Other Studies

37 other study(ies) available for diethyl pyrocarbonate and dimethyl sulfate

ArticleYear
Strand-specific recognition of a synthetic DNA replication fork by the SV40 large tumor antigen.
    Science (New York, N.Y.), 1992, Jun-19, Volume: 256, Issue:5064

    Topics: Adenosine Triphosphate; Antigens, Polyomavirus Transforming; Diethyl Pyrocarbonate; DNA Helicases; DNA Replication; DNA, Single-Stranded; Dose-Response Relationship, Drug; Electrophoresis, Polyacrylamide Gel; Ethylnitrosourea; Formates; Potassium Permanganate; Sulfuric Acid Esters; Time Factors

1992
Structural analysis of a group II intron by chemical modifications and minimal energy calculations.
    Journal of biomolecular structure & dynamics, 1990, Volume: 8, Issue:2

    Topics: Base Sequence; Diethyl Pyrocarbonate; Exons; Introns; Magnesium; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Phylogeny; RNA; RNA, Mitochondrial; Sulfuric Acid Esters; Thermodynamics; Yeasts

1990
Site-specific intercalation at the triplex-duplex junction induces a conformational change which is detectable by hypersensitivity to diethylpyrocarbonate.
    Nucleic acids research, 1991, Aug-11, Volume: 19, Issue:15

    Topics: Acridines; Adenine; Base Sequence; Diethyl Pyrocarbonate; DNA; Molecular Sequence Data; Nucleic Acid Conformation; Nucleotide Mapping; Oligonucleotides; Purines; Pyrimidines; Spectrophotometry, Ultraviolet; Sulfuric Acid Esters

1991
Melting and chemical modification of a cyclized self-splicing group I intron: similarity of structures in 1 M Na+, in 10 mM Mg2+, and in the presence of substrate.
    Biochemistry, 1990, Nov-06, Volume: 29, Issue:44

    Topics: Aldehydes; Animals; Base Sequence; Butanones; Carbodiimides; CME-Carbodiimide; Computer Simulation; Cross-Linking Reagents; Diethyl Pyrocarbonate; Introns; Magnesium; Molecular Sequence Data; Nucleic Acid Conformation; Nucleic Acid Denaturation; RNA Splicing; RNA, Catalytic; Sodium; Sulfuric Acid Esters; Tetrahymena

1990
Solution structure of human U1 snRNA. Derivation of a possible three-dimensional model.
    Nucleic acids research, 1990, Jul-11, Volume: 18, Issue:13

    Topics: Alkylating Agents; Base Composition; Base Sequence; Carbodiimides; Diethyl Pyrocarbonate; HeLa Cells; Humans; Models, Molecular; Molecular Sequence Data; Molecular Structure; Nucleic Acid Conformation; Ribonucleases; RNA, Small Nuclear; Solutions; Sulfuric Acid Esters

1990
Diethylpyrocarbonate and permanganate provide evidence for an unusual DNA conformation induced by binding of the antitumour antibiotics bleomycin and phleomycin.
    Nucleic acids research, 1988, Mar-25, Volume: 16, Issue:5

    Topics: Base Sequence; Bleomycin; Chemical Phenomena; Chemistry; Diethyl Pyrocarbonate; Formates; Manganese; Manganese Compounds; Methylene Blue; Molecular Sequence Data; Nucleic Acid Conformation; Oxides; Phleomycins; Sulfuric Acid Esters

1988
Tertiary structure of Escherichia coli tRNA(3Thr) in solution and interaction of this tRNA with the cognate threonyl-tRNA synthetase.
    European journal of biochemistry, 1988, Aug-15, Volume: 175, Issue:3

    Topics: Affinity Labels; Amino Acyl-tRNA Synthetases; Diethyl Pyrocarbonate; Escherichia coli; Ethylnitrosourea; Gene Expression Regulation; Nucleic Acid Conformation; Operator Regions, Genetic; RNA, Bacterial; RNA, Transfer, Amino Acid-Specific; RNA, Transfer, Thr; Structure-Activity Relationship; Sulfuric Acid Esters; Threonine-tRNA Ligase

1988
Use of RNA-DNA hybridization in chemical probing of large RNA molecules.
    Methods in enzymology, 1988, Volume: 164

    Topics: Diethyl Pyrocarbonate; DNA; Indicators and Reagents; Nucleic Acid Conformation; Nucleic Acid Hybridization; Ribonuclease T1; RNA; Sulfuric Acid Esters

1988
Fine mapping of DNA single-stranded regions using base-specific chemical probes: study of an open complex formed between RNA polymerase and the lac UV5 promoter.
    Biochemistry, 1989, May-16, Volume: 28, Issue:10

    Topics: Adenine; Chromosome Mapping; Cytosine; Diethyl Pyrocarbonate; DNA-Directed RNA Polymerases; DNA, Single-Stranded; Molecular Probes; Promoter Regions, Genetic; Sulfuric Acid Esters

1989
Tet repressor-tet operator contacts probed by operator DNA-modification interference studies.
    Journal of molecular biology, 1988, Aug-05, Volume: 202, Issue:3

    Topics: Autoradiography; Base Sequence; Diethyl Pyrocarbonate; DNA, Bacterial; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Ethylnitrosourea; Methylation; Molecular Sequence Data; Operator Regions, Genetic; Repressor Proteins; Sulfuric Acid Esters; Transcription Factors

1988
A study of the B-Z transition of the AC-rich region of the repeat unit of a satellite DNA from Cebus by means of chemical probes.
    The Journal of biological chemistry, 1988, Aug-25, Volume: 263, Issue:24

    Topics: Animals; Base Composition; Base Sequence; Cebus; Chemical Phenomena; Chemistry; Diethyl Pyrocarbonate; DNA, Satellite; Hydroxylamine; Hydroxylamines; Immunoassay; Molecular Sequence Data; Nucleic Acid Conformation; Osmium Tetroxide; Repetitive Sequences, Nucleic Acid; Sulfuric Acid Esters

1988
Chemical probing of the B-Z transition in negatively supercoiled DNA.
    Journal of biomolecular structure & dynamics, 1988, Volume: 6, Issue:1

    Topics: Base Composition; Base Sequence; Chemical Phenomena; Chemistry, Physical; Diethyl Pyrocarbonate; DNA, Superhelical; Hydroxylamines; Molecular Sequence Data; Osmium Tetroxide; Plasmids; Sulfuric Acid Esters

1988
Chemical probes reveal no evidence of Hoogsteen base pairing in complexes formed between echinomycin and DNA in solution.
    Journal of molecular recognition : JMR, 1988, Volume: 1, Issue:3

    Topics: Acetaldehyde; Alkylating Agents; Base Composition; Base Sequence; Binding Sites; Diethyl Pyrocarbonate; DNA; Echinomycin; Hydrogen-Ion Concentration; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Osmium Tetroxide; Palladium; Quinoxalines; Sulfuric Acid Esters; Tubercidin

1988
Chemical probing of homopurine-homopyrimidine mirror repeats in supercoiled DNA.
    Nature, 1988, Jun-02, Volume: 333, Issue:6172

    Topics: Diethyl Pyrocarbonate; DNA, Superhelical; Hydrogen-Ion Concentration; Nucleic Acid Conformation; Plasmids; Repetitive Sequences, Nucleic Acid; Sulfuric Acid Esters

1988
Chemical probes for higher-order structure in RNA.
    Proceedings of the National Academy of Sciences of the United States of America, 1980, Volume: 77, Issue:8

    Topics: Alkylating Agents; Chemical Phenomena; Chemistry; Diethyl Pyrocarbonate; Hydrazines; Nucleic Acid Conformation; Nucleic Acid Denaturation; Phenylalanine; RNA; RNA, Fungal; RNA, Transfer; Saccharomyces cerevisiae; Sulfuric Acid Esters

1980
Chemical probing of the tRNA--ribosome complex.
    Proceedings of the National Academy of Sciences of the United States of America, 1981, Volume: 78, Issue:4

    Topics: Alkylating Agents; Binding Sites; Diethyl Pyrocarbonate; Escherichia coli; Mutagens; Nucleic Acid Conformation; Protein Binding; Ribosomes; RNA, Bacterial; RNA, Transfer, Amino Acyl; Sulfuric Acid Esters

1981
Higher-order structure in the 3'-terminal domain VI of the 23 S ribosomal RNAs from Escherichia coli and Bacillus stearothermophilus.
    Journal of molecular biology, 1984, Nov-15, Volume: 179, Issue:4

    Topics: Alkylating Agents; Base Sequence; Biological Evolution; Diethyl Pyrocarbonate; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Geobacillus stearothermophilus; Macromolecular Substances; Models, Molecular; Nucleic Acid Conformation; Ribonucleases; RNA, Bacterial; RNA, Ribosomal; Sulfuric Acid Esters

1984
Alternative conformational states in the ribosome-associated 5.8S RNA.
    European journal of biochemistry, 1984, Jun-15, Volume: 141, Issue:3

    Topics: Animals; Autoradiography; Diethyl Pyrocarbonate; Electrophoresis, Polyacrylamide Gel; Male; Molecular Weight; Nucleic Acid Conformation; Rats; Rats, Inbred Strains; RNA, Ribosomal; Sulfuric Acid Esters

1984
Translation through an uncDC mRNA secondary structure governs the level of uncC expression in Escherichia coli.
    Journal of bacteriology, 1994, Volume: 176, Issue:5

    Topics: Base Sequence; Cloning, Molecular; Codon; Diethyl Pyrocarbonate; Escherichia coli; Gene Expression Regulation, Bacterial; Genes, Bacterial; Molecular Sequence Data; Mutagenesis, Site-Directed; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Plasmids; Proton-Translocating ATPases; Ribonucleases; RNA, Bacterial; RNA, Messenger; Substrate Specificity; Sulfuric Acid Esters

1994
Higher-order structure of bovine mitochondrial tRNA(SerUGA): chemical modification and computer modeling.
    Nucleic acids research, 1994, Dec-11, Volume: 22, Issue:24

    Topics: Alkylating Agents; Animals; Anticodon; Base Sequence; Cattle; Computer Simulation; Diethyl Pyrocarbonate; Mitochondria; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Phylogeny; RNA; RNA, Mitochondrial; RNA, Transfer, Ser; Sequence Alignment; Sulfuric Acid Esters

1994
Structure-mapping of the hairpin ribozyme. Magnesium-dependent folding and evidence for tertiary interactions within the ribozyme-substrate complex.
    Journal of molecular biology, 1994, Nov-18, Volume: 244, Issue:1

    Topics: Base Sequence; Binding Sites; CME-Carbodiimide; Diethyl Pyrocarbonate; Magnesium; Molecular Sequence Data; Nucleic Acid Conformation; Organometallic Compounds; RNA, Catalytic; Structure-Activity Relationship; Sulfuric Acid Esters

1994
Chemical probing of a virginiamycin M-promoted conformational change of the peptidyl-transferase domain.
    Nucleic acids research, 1994, Oct-25, Volume: 22, Issue:21

    Topics: Aldehydes; Base Sequence; Butanones; Diethyl Pyrocarbonate; Drug Synergism; Molecular Sequence Data; Nucleic Acid Conformation; Peptidyl Transferases; Protein Conformation; Ribosomes; RNA, Ribosomal, 23S; Sulfuric Acid Esters; Virginiamycin

1994
Structure of influenza virus RNP. I. Influenza virus nucleoprotein melts secondary structure in panhandle RNA and exposes the bases to the solvent.
    The EMBO journal, 1994, Jul-01, Volume: 13, Issue:13

    Topics: Base Composition; Base Sequence; Conserved Sequence; Diethyl Pyrocarbonate; DNA, Viral; Molecular Sequence Data; Nucleic Acid Conformation; Nucleocapsid Proteins; Nucleoproteins; Orthomyxoviridae; Polyribonucleotides; Protein Binding; RNA-Binding Proteins; RNA, Viral; Solvents; Sulfuric Acid Esters; Viral Core Proteins

1994
Structure and stability of human telomeric sequence.
    The Journal of biological chemistry, 1994, Aug-26, Volume: 269, Issue:34

    Topics: Circular Dichroism; Diethyl Pyrocarbonate; Humans; Hydrogen Bonding; Models, Molecular; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Potassium; Potassium Permanganate; Repetitive Sequences, Nucleic Acid; Sodium; Sulfuric Acid Esters; Telomere; Thermodynamics

1994
Interactions of three strands in joints made by RecA protein.
    Biochemistry, 1993, Dec-07, Volume: 32, Issue:48

    Topics: Bacteriophage M13; Base Sequence; Diethyl Pyrocarbonate; DNA; DNA, Viral; Hydrogen Bonding; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Potassium Permanganate; Rec A Recombinases; Sulfuric Acid Esters

1993
Structural polymorphism of homopurine DNA sequences. d(GGA)n and d(GGGA)n repeats form intramolecular hairpins stabilized by different base-pairing interactions.
    Biochemistry, 1996, Oct-08, Volume: 35, Issue:40

    Topics: Adenine; Base Composition; Base Sequence; Diethyl Pyrocarbonate; DNA; Electrophoresis, Polyacrylamide Gel; Guanine; Molecular Sequence Data; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligodeoxyribonucleotides; Repetitive Sequences, Nucleic Acid; Sulfuric Acid Esters; Temperature

1996
Analysis of the in vitro secondary structure of cucumber mosaic virus satellite RNA.
    RNA (New York, N.Y.), 1997, Volume: 3, Issue:9

    Topics: Base Composition; Base Sequence; Cucumovirus; Diethyl Pyrocarbonate; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; RNA, Viral; Sequence Analysis; Single-Strand Specific DNA and RNA Endonucleases; Solanum lycopersicum; Sulfuric Acid Esters

1997
Magnesium-dependent alternative foldings of active and inactive Escherichia coli tRNA(Glu) revealed by chemical probing.
    Nucleic acids research, 1999, Sep-01, Volume: 27, Issue:17

    Topics: Adenosine; Alkylating Agents; Cytosine; Diethyl Pyrocarbonate; Endoribonucleases; Escherichia coli; Magnesium; Nucleic Acid Conformation; Protein Denaturation; RNA, Transfer, Glu; Sulfuric Acid Esters

1999
RNA footprinting and modification interference analysis.
    Methods in molecular biology (Clifton, N.J.), 1999, Volume: 118

    Topics: Aniline Compounds; Diethyl Pyrocarbonate; Ethylnitrosourea; Hydrazines; Hydroxyl Radical; Nucleic Acid Denaturation; Ribonucleases; Ribonucleoproteins; RNA; RNA-Binding Proteins; Sequence Analysis; Sulfuric Acid Esters

1999
Tetraplex formation by the progressive myoclonus epilepsy type-1 repeat: implications for instability in the repeat expansion diseases.
    FEBS letters, 2001, Mar-02, Volume: 491, Issue:3

    Topics: Acids; Circular Dichroism; Cytosine Nucleotides; Diethyl Pyrocarbonate; DNA; Electrophoresis, Polyacrylamide Gel; G-Quadruplexes; Guanosine; Hydrogen Bonding; Myoclonic Epilepsies, Progressive; Nucleic Acid Conformation; Potassium Chloride; Promoter Regions, Genetic; Sulfuric Acid Esters; Temperature; Trinucleotide Repeat Expansion; Unverricht-Lundborg Syndrome

2001
Interaction of the Neurospora crassa mitochondrial tyrosyl-tRNA synthetase (CYT-18 protein) with the group I intron P4-P6 domain. Thermodynamic analysis and the role of metal ions.
    Journal of molecular biology, 2001, Apr-27, Volume: 308, Issue:2

    Topics: Base Sequence; Cations; Diethyl Pyrocarbonate; Entropy; Ethylnitrosourea; Introns; Iodine; Magnesium; Metals; Mitochondria; Molecular Sequence Data; Neurospora crassa; Nucleic Acid Conformation; Pliability; Potassium Chloride; Protein Binding; RNA-Binding Proteins; RNA, Fungal; RNA, Transfer, Tyr; Sulfuric Acid Esters; Temperature; Tyrosine-tRNA Ligase

2001
Hemin-stimulated docking of cytochrome c to a hemin-DNA aptamer complex.
    Biochemistry, 2002, Apr-23, Volume: 41, Issue:16

    Topics: Amino Acid Sequence; Animals; Base Sequence; Binding Sites; Cytochrome c Group; Diethyl Pyrocarbonate; DNA; G-Quadruplexes; Hemin; Horses; Molecular Sequence Data; Nucleic Acid Conformation; Oligonucleotides; Protein Binding; Sequence Deletion; Spectrophotometry, Ultraviolet; Sulfuric Acid Esters

2002
Ff gene 5 single-stranded DNA-binding protein assembles on nucleotides constrained by a DNA hairpin.
    Biochemistry, 2004, Mar-09, Volume: 43, Issue:9

    Topics: Base Sequence; Binding, Competitive; Deoxyribonuclease BamHI; Diethyl Pyrocarbonate; Dimerization; DNA-Binding Proteins; DNA, Single-Stranded; DNA, Viral; Gene Library; Hydrolysis; Inovirus; Molecular Sequence Data; Multigene Family; Nucleic Acid Conformation; Sulfuric Acid Esters; Viral Proteins; Virus Assembly

2004
Architecture of a Diels-Alderase ribozyme with a preformed catalytic pocket.
    Chemistry & biology, 2004, Volume: 11, Issue:9

    Topics: Anthracenes; Base Sequence; Binding Sites; Diethyl Pyrocarbonate; Electrophoresis, Polyacrylamide Gel; Lead; Maleimides; Models, Molecular; Molecular Sequence Data; Mutagenesis, Site-Directed; Nucleic Acid Conformation; Ribonucleases; RNA, Catalytic; Spectrometry, Fluorescence; Sulfuric Acid Esters

2004
Intramolecular quadruplex conformation of human telomeric DNA assessed with 125I-radioprobing.
    Nucleic acids research, 2004, Volume: 32, Issue:18

    Topics: Base Sequence; Diethyl Pyrocarbonate; DNA; Electrophoretic Mobility Shift Assay; G-Quadruplexes; Humans; Iodine Radioisotopes; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Potassium; Sodium; Sulfuric Acid Esters; Telomere

2004
Probing RNA structure with chemical reagents and enzymes.
    Current protocols in nucleic acid chemistry, 2001, Volume: Chapter 6

    Topics: Aldehydes; Bacteriophage T4; Base Pairing; Biochemistry; Butanones; CME-Carbodiimide; Diethyl Pyrocarbonate; Electrophoresis; Endonucleases; Ethylnitrosourea; Indicators and Reagents; Nucleic Acid Conformation; Phosphorus Radioisotopes; Polynucleotide 5'-Hydroxyl-Kinase; Reference Standards; RNA; Sulfuric Acid Esters

2001
Chemical and enzymatic probing of spatial structure of the omega leader of tobacco mosaic virus RNA.
    Biochemistry. Biokhimiia, 2010, Volume: 75, Issue:4

    Topics: 5' Untranslated Regions; Base Sequence; Diethyl Pyrocarbonate; Endoribonucleases; Molecular Sequence Data; Nucleic Acid Conformation; Ribonuclease, Pancreatic; RNA Stability; RNA, Viral; Sulfuric Acid Esters; Tobacco Mosaic Virus

2010