cytosine has been researched along with oligonucleotides in 265 studies
| Timeframe | Studies, this research(%) | All Research% |
|---|---|---|
| pre-1990 | 44 (16.60) | 18.7374 |
| 1990's | 37 (13.96) | 18.2507 |
| 2000's | 96 (36.23) | 29.6817 |
| 2010's | 72 (27.17) | 24.3611 |
| 2020's | 16 (6.04) | 2.80 |
| Authors | Studies |
|---|---|
| Kisselev, LL; Mazo, AM; Schienker, VS | 1 |
| Kirnos, MD; Vanyushin, BF; Vasilyev, VK | 1 |
| Dokhiem, M; Sulimova, GE; Vaniushin, BF | 1 |
| Hattman, S; Ormondt, HV | 1 |
| Raska, K; Varricchio, F | 1 |
| Ainsworth, CF; Danyluk, SS; Ezra, FS; Kondo, NS | 1 |
| Ju Lin, H | 1 |
| Blinov, MN; Egorova, VA | 1 |
| Ohe, K; Oppenheim, LB | 1 |
| Dobritsa, AP; Vanyushin, BF | 1 |
| Harbers, B; Harbers, K; Spencer, JH | 1 |
| Dosanjh, MK; Galeros, G; Goodman, MF; Singer, B | 1 |
| Nussinov, R; Smythers, G | 1 |
| Jenkins, TC; Neidle, S; Walton, AR | 1 |
| Li, BF; Tan, NW | 1 |
| Adler, VV; Goodwin, GH; Klenova, EM; Lobanenkov, VV; Nicolas, RH; Paterson, H; Polotskaja, AV | 1 |
| Chládek, S; Tezuka, M | 1 |
| Edwards, EL; Gray, DM; Patrick, MH; Ratliff, RL | 1 |
| Bianchi, MS; Bianchi, NO; Larramendy, M | 1 |
| Genest, D | 1 |
| Chen, FM | 1 |
| Antonarakis, SE; Bell, W; Griffin, AM; Kazazian, HH; Youssoufian, H | 1 |
| Pullman, B; Randrianarivelo, M; Zakrzewska, K | 1 |
| Berman, HM; Beveridge, D; Ginell, S; Sowri, A | 1 |
| Bur'ianov, IaI; D'iachenko, GP; Eroshina, NV; Il'in, AV; Korsunskiĭ, OF | 1 |
| Budowsky, EI; Guskova, LI; Levitan, TL; Monastyrskaya, GS; Sheichenko, VI; Verdlov, ED | 1 |
| Harris, R; Pestka, S | 1 |
| Borer, PN; Dengler, B; Tinoco, I; Uhlenbeck, OC | 1 |
| Danilevich, VN; Lysenko, AM; Vaniushin, BF | 1 |
| Banerjee, AK; Shatkin, AJ; Stoltzfus, CM | 1 |
| Galfaian, VT; Galoian, AA; Vaniushin, BF; Vasil'ev, VK; Zakharian, RA | 1 |
| Bellett, AJ; Primrose, SB; Younghusband, HB | 1 |
| Brown, DD; Gage, LP; Suzuki, Y | 1 |
| Strobl, JS; Thompson, EB | 1 |
| Sneider, TW | 1 |
| Adam, S; Conti, M; Huynh-Dinh, T; Igolen, J; Langlois d'Estaintot, B; Neumann, JM; Taboury, JA; Taillandier, E; Tran-Dinh, S | 1 |
| Peticolas, WL; Thomas, GA | 1 |
| Bird, AP | 1 |
| Haasnoot, CA; Ikehara, M; Kobayashi, Y; Kyogoku, Y; Ohkubo, M; Ohtsuka, E; Uesugi, S; van Boom, JH; van der Marel, GA; Westerink, HP | 1 |
| Hakoshima, T; Rich, A; van Boom, JH; van der Marel, G; Wang, AH | 1 |
| Manzini, G; Quadrifoglio, F; Yathindra, N | 1 |
| den Hartog, JH; Marcelis, AT; Reedijk, J; van der Marel, GA; Wille, G | 1 |
| Jayaraman, S; Sundaralingam, M; Yathindra, N | 1 |
| Fujii, S; Rich, A; van Boom, JH; van der Marel, G; Wang, AH | 1 |
| Kozak, M | 1 |
| Sung, WL | 1 |
| Duhamel-Maestracci, N; Harbers, K; Spencer, JH | 1 |
| Alkema, D; Bell, RA; Everett, JR; Hughes, DW; Neilson, T; Romaniuk, PJ | 1 |
| Laayoun, A; Smith, SS | 1 |
| Cech, TR; Chapman, T; Moran, S; Pyle, AM; Strobel, SA; Turner, DH | 1 |
| Delhez, H; Larondelle, Y; Lemaigre, F; Luzzatto, L; Mariamé, B; Mason, P; Philippe, M; Rousseau, GG | 1 |
| Durland, RH; Jayaraman, K; Myrick, MA; Rao, TS; Rayford, J; Revankar, GR; Seth, DM; Singh, P; Tinsley, JH | 1 |
| Efremova, EIu; Limborskaia, SA; Miasnikov, VA; Potapov, VK; Prosniak, MI; Sverdlov, ED; Veselovskaia, SI | 1 |
| Ho, PS; Kagawa, TF; Schroth, GP | 1 |
| Cervi, AR; Guy, A; Hunter, WN; Leonard, GA; Téoule, R | 1 |
| Hershko, A; Kafri, T; Razin, A | 1 |
| Amici, L; Gasparro, FP; Park, J | 1 |
| Bhagwat, AS; Lieb, M | 1 |
| Nielsen, P; Nordén, B; Wittung, P | 1 |
| Hutchison, CA; Tollefsbol, TO | 1 |
| Clark, SJ; Harrison, J; Molloy, PL | 1 |
| Capaldi, DC; Cassidy, SA; Fox, KR; Neidle, S; Reese, CB; Roselt, PD; Slickers, P; Trent, JO | 1 |
| Chaput, JC; Roberts, C; Switzer, C | 1 |
| Damha, MJ; Gehring, K; Klinck, R; Robidoux, S | 1 |
| Damha, MJ; Robidoux, S | 1 |
| Caulfield, JL; Tannenbaum, SR; Wishnok, JS | 1 |
| Christensen, L; Hansen, HF; Koch, T; Nielsen, PE | 1 |
| Brennan, RG; Goodman, RH; Huang, MS; Kwok, RP; Laurance, ME; Lundblad, JR; Richards, JP | 1 |
| Boiteux, S; Cadet, J; D'Ham, C; Girard, PM | 1 |
| Andreola, ML; Fournier, M; Kolocheva, TI; Litvak, S; Maksakova, GA; Martiyanov, IV; Nevinsky, GA; Tarrago-Litvak, L; Timofeeva, OA; Yamkovoy, VI; Zakharova, OD | 1 |
| Mathison, BH; Ross, MK; Said, B; Shank, RC | 1 |
| Boudou, V; Busson, R; De Bouvere, B; Herdewijn, P; Kerremans, L; Lescrinier, E; Schepers, G; Van Aerschot, A | 1 |
| Langley, DR | 1 |
| Madhusudhan, MS; Vishveshwara, S | 1 |
| Bjornsti, MA; Essigmann, JM; Fertala, J; Park, HJ; Pommier, Y; Pourquier, P; Ueng, LM; Wang, D | 1 |
| McAllister, MA; Root, DD; Shangguan, X; Xu, J | 1 |
| Gräslund, A; Jernström, B; Pradhan, P; Seidel, A | 1 |
| Lagunavicius, A; Lubys, A; Sapranauskas, R; Sasnauskas, G; Siksnys, V; Vilkaitis, G | 1 |
| Cheng, YC; Chou, KM; Kukhanova, M | 1 |
| Brabec, V; Farrell, N; Kasparkova, J; Neplechova, K | 1 |
| Hoffmann, AK; Hüttermann, J | 1 |
| Hang, B; Perry, A; Sági, J; Singer, B | 1 |
| Giege, R; Petyuk, V; Potapov, V; Serikov, R; Tolstikov, V; Vlassov, V; Zenkova, M | 1 |
| Alexeev, YI; Brevnov, MG; Geinguenaud, F; Gromova, ES; Liquier, J; Petrauskene, OV; Taillandier, E | 1 |
| Franchina, M; Kay, PH | 1 |
| Miura, T; Ogata, N | 1 |
| Chaput, JC; Switzer, C | 1 |
| Cernilogar, F; Evangelista, M; Lombardi, L; Miarelli, C; Pitto, L; Rocchi, P | 1 |
| Agrawal, S; Kandimalla, ER; Yu, D; Zhao, Q | 1 |
| Matsumoto, Y; Takao, M; Yasui, A; Yonei, S; Zhang, QM | 1 |
| Kontogiannis, L; Lilley, DM; Maxwell, K; Wilson, TJ; Zhao, ZY | 1 |
| Cao, X; Henikoff, S; Jackson, JP; Jacobsen, SE; Lindroth, AM; McCallum, CM; Zilberman, D | 1 |
| Leroy, JL; Nonin-Lecomte, S | 1 |
| Berger, I; Spacková, N; Sponer, J | 1 |
| Leroy, JL; Snoussi, K | 1 |
| Laval, J; Privezentzev, CV; Saparbaev, M | 1 |
| Orgel, LE; Wu, T | 1 |
| Debrunner-Vossbrinck, BA; Ludwig, W; Oyaizu, H; Stackebrandt, E; Woese, CR | 1 |
| Orgel, LE; Schwartz, AW | 1 |
| Giovannoni, SJ; Weisburg, WG; Woese, CR | 1 |
| Bacolod, MD; Basu, AK | 1 |
| Alberti, P; Chaires, J; Guittat, L; Hélène, C; Lehn, JM; Mergny, JL; Ren, J; Riou, JF; Teulade-Fichou, MP; Vigneron, JP | 1 |
| Geinguenaud, F; Gouyette, C; Huynh-Dinh, T; Khomyakova, E; Liquier, J; Taillandier, E | 1 |
| Balow, G; Bharadwaj, R; Leeds, JM; Maier, MA; Manoharan, M; Springer, RH | 1 |
| Brodin, P; Buckle, M; Engels, J; Gottikh, M; Mouscadet, JF; Parsch, U; Pinskaya, M; Romanova, E | 1 |
| Maeda, M; Matsuyama, Y; Nagatsugi, F; Sasaki, S | 1 |
| Amin, S; Colgate, KC; Geacintov, NE; Huang, X; Kolbanovskiy, A | 1 |
| Boyd, A; Cuenoud, B; Majumdar, A; Martin, P; Miller, PS; Natt, F; Puri, N; Seidman, MM | 1 |
| Burdzy, A; Lin, SS; Liu, P; Rogstad, DK; Sowers, LC | 1 |
| Hara, H; Kawamoto, Y; Sugimoto, N; Wu, P | 2 |
| Dohno, C; Nakatani, K; Saito, I | 1 |
| Miller, PS; Nagatsugi, F; Sasaki, S; Seidman, MM | 1 |
| Bohr, VA; Calvayrac, G; Jensen, A; Karahalil, B; Stevnsner, T | 1 |
| Dickerson, RE; Han, GW; Kopka, ML; Langs, D; Sawaya, MR | 1 |
| Kawamura, K; Okamoto, F | 1 |
| Barber, RC; O'Keefe, GE; Peters-Hybki, DL; Rivera-Chavez, FA | 1 |
| Dou, H; Hazra, TK; Mitra, S | 1 |
| Webba da Silva, M | 1 |
| Buck, GA; Collins, AM; Gaeta, B; Ikutani, M; Nadkarni, A; Puiu, D | 1 |
| Gros, L; Laval, J; Maksimenko, AV; Privezentzev, CV; Saparbaev, MK | 1 |
| Cohen, HM; Griffiths, AD; Tawfik, DS | 1 |
| Bernacchia, G; Cantoni, RM; Cella, R; De Bastiani, M; Evangelista, M; Locci, MT; Pitto, L; Scebba, F | 1 |
| Mattei, S; Mertz, E; Zimmerman, SC | 1 |
| Wang, Y; Zeng, Y | 1 |
| Larivière, L; Moréra, S | 1 |
| Cao, W; Connor, EE; Dong, L; Hitchcock, TM; Meira, LB; Samson, LD; Wyatt, MD | 1 |
| Fujishiro, M; Ishii, T; Masuda, M; Matsuse, T; Teramoto, S | 1 |
| Bevilacqua, PC; Brown, TS; Moody, EM | 1 |
| Burdzy, A; Kang, JI; Liu, P; Sowers, LC | 1 |
| Fujitsuka, M; Kawai, K; Majima, T; Osakada, Y; Takada, T | 1 |
| Baker, ES; Bowers, MT; Ferzoco, A; Gidden, J | 1 |
| Kiechle, FL; Zhang, X | 1 |
| Barton, JK; O'Neill, MA; Shao, F | 1 |
| Inoue, S; Oishi, M | 1 |
| Baase, WA; Johnson, NP; von Hippel, PH | 1 |
| Kypr, J; Vorlícková, M; Zemánek, M | 1 |
| Brown, T; Fox, KR; Powers, VE; Ranasinghe, RT; Rusling, DA | 1 |
| Dediulescu, DF; Dediulescu, L | 1 |
| Assadzadeh, A; Flanagan, J; Kaminsky, ZA; Petronis, A | 1 |
| Chen, Y; Costa, E; Grayson, DR; Guidotti, A; Jia, X; Mitchell, CP; Sharma, RP | 1 |
| Brucato, JR; Ciciriello, F; Colangeli, L; Costanzo, G; Crestini, C; Di Mauro, E; Neri, V; Saladino, R | 1 |
| Jähnchen, J; Purwanto, MG; Weisz, K | 1 |
| Benner, SA; Sismour, AM | 1 |
| Alam, R; Cuenoud, B; Glazer, PM; Kuan, JY; Liu, ST; Majumdar, A; Miller, PS; Seidman, MM; Shahid, KA; Sui, X | 1 |
| Marrs, JA; Mumaw, C; Skalnik, DG; Young, SR | 1 |
| Seela, F; Shaikh, KI | 1 |
| Li, H; Peng, X; Seela, F | 1 |
| Chacun, H; Couvreur, P; Hillaireau, H; Janin, J; Le Doan, T | 1 |
| Imanishi, T; Inohara, H; Matsugu, S; Obika, S | 1 |
| Ali, MM; Mori, S; Nagatsugi, F; Ogata, Y; Sasaki, S | 1 |
| Merchán, M; Olaso-González, G; Roca-Sanjuán, D; Serrano-Andrés, L | 1 |
| Guliaev, AB; Hang, B | 1 |
| Brown, T; Lincoln, P; Sandin, P; Wilhelmsson, LM | 1 |
| Kamei, T; Okamoto, A; Tainaka, K; Tanaka, K | 1 |
| Blas, JR; Grandas, A; Orozco, M; Ortega, JA; Pedroso, E; Robles, J | 1 |
| Li, T; Li, X; Liu, X; Wang, Y | 1 |
| Nomura, A; Okamoto, A; Tainaka, K; Tanaka, K; Umemoto, T | 1 |
| Kageyama, Y; Okamoto, I; Ono, A; Sugiyama, K | 1 |
| Kawakami, A; Loakes, D; Morimitsu, T; Negishi, K; Okugawa, Y; Otsuka, C; Oyama, H; Sekine, D; Suzuki, T | 1 |
| Crean, C; Geacintov, NE; Shafirovich, V; Uvaydov, Y | 1 |
| Banerjee, D; Pal, SK | 1 |
| Brown, T; Lee, M; Mackay, H; Sielaff, A | 1 |
| Campos, JL; Gouyette, C; Navaza, J; Pous, J; Subirana, JA; Urpí, L | 1 |
| Berger, JM; Bressani, R; Corn, JE; Griep, MA; Hinrichs, SH; Larson, MA; Sayood, K | 1 |
| Schuster, GB; Srinivasan, S | 1 |
| Hudson, RH; Wojciechowski, F | 1 |
| Amato, J; Borbone, N; De Pauw, E; Gabelica, V; Mayol, L; Oliviero, G; Piccialli, G; Rosu, F | 1 |
| Burden, AF; Genereux, DP; Johnson, WC; Laird, CD; Stöger, R | 1 |
| Darwanto, A; Herring, JL; Kim, CH; Lao, VV; Soto, U; Sowers, LC | 1 |
| Nakatani, K; Oka, Y; Peng, T; Takei, F | 1 |
| Crespo-Hernández, CE; de la Harpe, K; Kohler, B | 1 |
| Albinsson, B; Börjesson, K; Brown, T; El-Sagheer, AH; Preus, S; Wilhelmsson, LM | 1 |
| Chen, G; Kennedy, SD; Turner, DH | 1 |
| Glick, J; Lin, Y; Noronha, AM; Vouros, P; Wilds, CJ; Xiong, W | 1 |
| Caldwell, CW; Fan, X; Howard, DJ; Shi, H; Suter, JD | 1 |
| Briggs, AW; Kircher, M; Krause, J; Meyer, M; Pääbo, S; Stenzel, U | 1 |
| Carell, T; Fazio, D; Glas, AF; Heil, K; Kaya, E; Maul, MJ; Schneider, S | 1 |
| Jin, SG; Kadam, S; Pfeifer, GP | 1 |
| Megger, DA; Muller, J | 1 |
| Chen, D; Constant, JF; Du, Y; Huang, J; Ma, H; Weng, X; Zhang, D; Zhou, X | 1 |
| Balaz, M; Choi, JK; D'Urso, A; Lambousis, MI; Ngwa, FN; Purrello, R; Shabbir-Hussain, M | 1 |
| Belous, LF; Rubin, YV; Yakuba, CA | 1 |
| Sastry, M; Shukla, S | 1 |
| Lan, C; Ling, L; Wang, L; Wu, C; Xiong, C | 1 |
| Fujimoto, K; Konishi-Hiratsuka, K; Sakamoto, T; Yoshimura, Y | 1 |
| Berman, A; Konovalov, O; Sigal-Batikoff, I; Singh, A | 1 |
| Plavec, J; Podbevsek, P; Zavasnik, J | 1 |
| Ikeda, S; Okamoto, A; Sugizaki, K; Yanagisawa, H | 1 |
| Dai, Q; He, C | 1 |
| Hari, Y; Imanishi, T; Kodama, T; Obika, S | 1 |
| Li, H; Luo, Y; Sun, X | 1 |
| Huang, WT; Li, NB; Luo, HQ; Xie, WY | 1 |
| Carell, T; Deiml, CA; Gnerlich, FA; Karaghiosoff, K; Koch, SC; Lischke, U; Münzel, M; Pfaffeneder, T; Stathis, D | 1 |
| Barker, A; Leedman, PJ; Pendini, NR; Sidiqi, M; Szeto, C; Traore, DA; Wilce, JA; Wilce, MC; Yoga, YM | 1 |
| Gupta, D; Ibáñez, S; Kozma, Á; Lippert, B; Sanz Miguel, PJ; Silaghi-Dumitrescu, R | 1 |
| Narula, G; Tse-Dinh, YC | 1 |
| Chen, J; Li, W; Qi, H; Wang, B; Wang, S; Wang, Y; Yang, Y; Yu, C; Zhang, Q | 1 |
| Chatelain, G; Rozenski, J; Schepers, G; Van Aerschot, A | 1 |
| Choi, W; Jang, K; Na, S; Park, J | 1 |
| Caruso, M; Mazzini, S; Mondelli, R; Scaglioni, L; Sirtori, FR | 1 |
| Buckle, M; Fedorova, OS; Gasparutto, D; Ishchenko, AA; Leh, H; Prorok, P; Saint-Pierre, C; Saparbaev, M; Tudek, B | 1 |
| Calabretta, A; Leumann, CJ | 1 |
| Ding, J; Qin, W; Wang, X; Zhang, Y | 1 |
| Kanamori, T; Masaki, Y; Ohkubo, A; Ohzeki, H; Seio, K; Sekine, M; Tokugawa, M; Tsunoda, H | 1 |
| Delaney, JC; Drennan, CL; Essigmann, JM; Fedeles, BI; Li, D; Shrivastav, N; Wong, C; Yang, X | 1 |
| Banks, CE; Brotons, A; Iniesta, J; Mas, LA; Metters, JP | 1 |
| Ding, W; Liang, H; Xu, M; Zhu, H | 1 |
| Bitinaite, J; Chin, HG; Corrêa, IR; Dai, N; Pradhan, S | 1 |
| Pettitt, BM; Sowers, LC; Theruvathu, JA; Yin, YW | 1 |
| Masaki, Y; Ohkubo, A; Seio, K; Sekine, M; Tsunoda, H; Yamada, K | 1 |
| Yang, C; Yang, F; Yang, X; Zheng, Y | 1 |
| Hudson, RH; Suchý, M | 1 |
| Bogojeski, JJ; Damha, MJ; Johnsson, RA | 1 |
| Brown, T; Fox, KR; Kimber, ST | 1 |
| Wang, M; Wong, J; Xiong, J; Xu, RM; Yang, N; Zhou, T; Zhu, B | 1 |
| Akabane-Nakata, M; Hari, Y; Obika, S | 1 |
| Ju, E; Qu, X; Ren, J; Tao, Y; Zhang, Y | 1 |
| Li, X; Ma, K; Tian, W; Wang, H; Xu, B | 1 |
| Banerjee, S; Brooks, S; Egli, M; Eichman, BF; Joachimiak, A; Nocek, B; Pallan, PS; Stone, MP; Szulik, MW; Voehler, M | 1 |
| Cui, L; Shao, F; Wu, Q; Xuan, S; Zhang, D | 1 |
| Froeyen, M; Kachare, D; Rozenski, J; Schepers, G; Van Aerschot, A; Venkatesham, A | 1 |
| Brazier, J; Kikuta, K; Nagatsugi, F; Onizuka, K; Piao, H; Sasaki, S; Taniguchi, Y | 1 |
| Chang, SC; Delaney, JC; Essigmann, JM; Fedeles, BI; Freudenthal, BD; Li, D; Singh, V; Wilson, SH; Yau, E | 1 |
| Han, D; He, C; Jiang, X; Liu, M; Lu, X; Sun, Z; Xia, B; Xie, W; Yi, C; Yin, Q; Zeng, H; Zhou, A | 1 |
| Paukstelis, PJ; Tripathi, S | 1 |
| Henley, RY; Johnson, M; Kanavarioti, A; Vazquez-Pagan, AG; Wanunu, M | 1 |
| Beznosková, P; Gunišová, S; Valášek, LS | 1 |
| Dumat, B; Larsen, AF; Wilhelmsson, LM | 1 |
| Brazard, J; Burghardt, I; Gustavsson, T; Huix-Rotllant, M; Improta, R; Lewis, FD; Markovitsi, D; Thazhathveetil, AK; Vayá, I | 1 |
| Lönnberg, T; Shinde, VS; Ukale, D | 1 |
| Dembska, A | 1 |
| Brown, T; Shivalingam, A | 1 |
| Nilsson, L; Villa, A; Xu, Y | 1 |
| Bratchikov, M; Dabužinskaitė, J; Jakubovska, J; Meškys, R; Tauraitė, D | 1 |
| Leszczynska, G; Nawrot, B; Sadowska, K; Sierant, M; Sobczak, M; Sochacka, E | 1 |
| Guo, P; Lam, SL | 1 |
| Hari, Y; Leumann, CJ; Schürch, S | 1 |
| Dembska, A; Juskowiak, B; Kierzek, E | 1 |
| Liao, C; Ren, W; Yang, J; Zhao, J; Zheng, K | 1 |
| Guo, Z; Qiu, W; Xu, H; Zheng, B; Zheng, Y | 1 |
| Lönnberg, T; Ukale, DU | 1 |
| Cao, C; Huang, J; Li, MY; Long, YT; Qiu, H; Wang, MB; Wang, YQ; Wu, XY; Ying, YL | 1 |
| An, J; Anderson, JL; Clark, KD; Ding, X; Emaus, MN; Peng, X; Varona, M; Zhu, C | 1 |
| Chen, Y; Liu, C; Luo, X; Wang, Y; Wu, F; Yang, W; Zhang, X; Zhou, X; Zou, G | 1 |
| Demissie, A; Dickson, RM; Huard, DJE; Kim, D; Lewis, D; Lieberman, RL; Petty, JT | 1 |
| Kondhare, D; Leonard, P; Seela, F; Zhou, X | 1 |
| Jordan, B | 1 |
| Al-Hashimi, HM; Kremser, J; Kreutz, C; Rangadurai, A; Shi, H | 1 |
| Plavec, J; Trajkovski, M | 1 |
| Kanamori, T; Masaki, Y; Seio, K; Yamaguchi, K; Yamazaki, A | 1 |
| Nieszporek, K; Panczyk, AT; Wolski, P | 1 |
| Cao, Y; Ding, P; Li, W; Pei, R | 1 |
| Stöger, R | 1 |
| Ahmad, S; Hossain, MN; Kraatz, HB | 1 |
| Bai, Y; Bian, L; Chen, K; Chen, W; Ma, X; Xue, P; Zhang, J | 1 |
| Aralov, AV; Barceló-Oliver, M; Hebenbrock, M; Müller, J; Schönrath, I; Tsvetkov, VB; Zatsepin, TS | 1 |
| Ikebukuro, K; Kimura, K; Oshikawa, D; Yoshida, W | 1 |
| Baljinnyam, T; Hackfeld, LC; Herring, JL; Hsu, CW; Sowers, LC; Sowers, ML; Tang, H; Zhang, K | 1 |
| Enmark, M; Fornstedt, T; Häggström, J; Samuelsson, J | 1 |
| Borbone, N; D'Errico, S; Falanga, AP; Greco, F; Marzano, M; Oliviero, G; Piccialli, G; Roviello, GN; Terracciano, M | 1 |
| Casasnovas, R; Frau, J; Grand, A; Hernandez-Haro, N; Morell, C; Ortega-Castro, J; Solis-Calero, C | 1 |
| Barzak, FM; Filichev, VV; Harjes, E; Harjes, S; Jameson, GB; Kurup, HM; Kvach, MV | 1 |
| Horiba, M; Inoue, T; Obika, S; Sakurai, Y; Yamaguchi, T; Yoshida, T | 1 |
| Ghezzo, M; Grigoletto, L; Groaz, E; Herdewijn, P; Rigo, R; Sissi, C | 1 |
5 review(s) available for cytosine and oligonucleotides
| Article | Year |
|---|---|
Very short patch repair: reducing the cost of cytosine methylation.
Topics: Amino Acid Sequence; Base Sequence; Cytosine; DNA Repair; DNA, Bacterial; Endodeoxyribonucleases; Escherichia coli; Genome, Bacterial; Humans; Methylation; Molecular Sequence Data; Mutation; Oligonucleotides | 1996 |
Molecular dynamic simulations of environment and sequence dependent DNA conformations: the development of the BMS nucleic acid force field and comparison with experimental results.
Topics: Adenine; Computer Simulation; Crystallography, X-Ray; Cytosine; Deoxyribose; DNA; Guanine; Magnetic Resonance Spectroscopy; Models, Chemical; Molecular Conformation; Oligonucleotides; Organophosphates; Thymine | 1998 |
[Antiherpetic therapy].
Topics: 2-Aminopurine; Acyclovir; Antiviral Agents; Bromodeoxyuridine; Cidofovir; Cytosine; Drug Combinations; Famciclovir; Foscarnet; Ganciclovir; Humans; Idoxuridine; Keratitis, Herpetic; Oligonucleotides; Ophthalmic Solutions; Organophosphonates; Treatment Outcome; Valacyclovir; Valine; Vidarabine | 2005 |
The analytical and biomedical potential of cytosine-rich oligonucleotides: A review.
Topics: Animals; Biocompatible Materials; Biosensing Techniques; Cytosine; DNA; Drug Delivery Systems; Glucose; Gold; Humans; Metal Nanoparticles; Models, Molecular; Nanotechnology; Oligonucleotides; Silver | 2016 |
Synthesis of chemically modified DNA.
Topics: Adenine; Cytosine; DNA; DNA Ligases; DNA-Directed DNA Polymerase; Guanine; Oligonucleotides; Polymerase Chain Reaction; Thymine | 2016 |
260 other study(ies) available for cytosine and oligonucleotides
| Article | Year |
|---|---|
A directed alteration of ribonuclease specificity. Hydrolysis of polyribonucleotides containing modified cytosine bases.
Topics: Cytosine; Escherichia coli; Oligonucleotides; Phosphoric Monoester Hydrolases; Polynucleotides; Ribonucleases; Structure-Activity Relationship; Sulfites | 1975 |
Separation of pyrimidine deoxyribooligonucleotides according to length and composition using thin-layer chromatography on deae-cellulose.
Topics: Animals; Buffers; Cattle; Chromatography; Chromatography, DEAE-Cellulose; Chromatography, Thin Layer; Cytosine; Deoxyribonucleotides; DNA; Hydrogen-Ion Concentration; Methods; Methylation; Oligonucleotides; Protein Hydrolysates; Pyrimidine Nucleotides; Sodium Chloride; Thymus Gland | 1975 |
[Distribution of 5-methylcytosine in pyrimidine oligonucleotides of higher plant DNA].
Topics: Cytosine; DNA; Methylation; Oligodeoxyribonucleotides; Oligonucleotides; Plants | 1978 |
Electrophoretic behavior of oligonuceleotides containing 5-hydroxymethyl cytosine.
Topics: Base Sequence; Cytosine; Deoxyribonucleases; DNA, Viral; Electrophoresis, Cellulose Acetate; Electrophoresis, Paper; Oligodeoxyribonucleotides; Oligonucleotides; Pancreas | 1976 |
Synthesis of VA RNA in productive and abortive infections with adenovirus type 12.
Topics: Adenine; Adenoviridae; Cell Line; Cytosine; Guanine; Oligonucleotides; RNA; RNA, Viral; Uracil | 1976 |
The effect of (2'-5') and (3'-5') phosphodiester linkages on conformational and stacking properties of cytidylyl-cytidine in aqueous solution.
Topics: Cytosine; Cytosine Nucleotides; Magnetic Resonance Spectroscopy; Models, Molecular; Molecular Conformation; Oligonucleotides; Oligoribonucleotides; Phosphates; Ribose; Structure-Activity Relationship | 1976 |
Absence of long pyrimidine tracts in cytosine-rich repeating units present in Escherichia coli DNA.
Topics: Base Sequence; Chromatography, DEAE-Cellulose; Cytosine; DNA, Bacterial; Escherichia coli; Oligonucleotides; Pyrimidines | 1975 |
[Oligonucleotides of human thrombocytes and their participation in the release reaction induced by thrombin].
Topics: Adenine; Blood Coagulation; Blood Platelets; Cytosine; Guanine; Humans; Oligonucleotides; Thrombin; Uracil | 1975 |
Low frequency of (5'-3') -C-G- connection in 70S RNA from simian sarcoma virus.
Topics: Animals; Base Sequence; Cell Line; Cell Transformation, Neoplastic; Cytosine; Guanine; Oligonucleotides; Oncogenic Viruses; Rats; Ribonucleases; RNA Viruses; RNA, Viral | 1975 |
On the nature of the cytosine-methylated sequence in DNA of Bacillus brevis var. G.-B.
Topics: Bacillus; Bacteriophages; Base Sequence; Cytosine; DNA, Bacterial; DNA, Viral; Methylation; Oligonucleotides | 1975 |
Nucleotide clusters in deoxyribonucleic acids. XII. The distribution of 5-methylcytosine in pyrimidine oligonucleotides of mouse L-cell satellite DNA and main band DNA.
Topics: Animals; Base Sequence; Cytosine; DNA; L Cells; Methionine; Mice; Oligonucleotides | 1975 |
Kinetics of extension of O6-methylguanine paired with cytosine or thymine in defined oligonucleotide sequences.
Topics: Base Composition; Base Sequence; Cytosine; DNA-Directed DNA Polymerase; Escherichia coli; Guanine; Kinetics; Molecular Sequence Data; Mutagenesis; Oligonucleotides; Thymine | 1991 |
Trends in the 5' vs. 3' flanks of oligonucleotides in eukaryotic and prokaryotic genomes: the asymmetric roles played by cytosine and guanine.
Topics: Cytosine; Genome; Guanine; Models, Genetic; Oligonucleotides | 1991 |
Studies on 1,3-diaryltriazene analogues of berenil: molecules with potential GC base-pair selectivity.
Topics: Base Composition; Base Sequence; Cytosine; Diminazene; Guanine; Molecular Sequence Data; Molecular Structure; Oligonucleotides; Triazenes; X-Ray Diffraction | 1991 |
Interaction of oligonucleotides containing 6-O-methylguanine with human DNA (cytosine-5-)-methyltransferase [published erratumm appears in Biochemistry 1992 Aug 4;31(30):7008].
Topics: Base Composition; Base Sequence; Cytosine; DNA; DNA (Cytosine-5-)-Methyltransferases; Guanine; Humans; Kinetics; Methylation; Molecular Sequence Data; Nucleotide Mapping; Oligonucleotides | 1990 |
A novel sequence-specific DNA binding protein which interacts with three regularly spaced direct repeats of the CCCTC-motif in the 5'-flanking sequence of the chicken c-myc gene.
Topics: Animals; Base Composition; Base Sequence; Chick Embryo; Chromatography, Affinity; Cytosine; DNA; DNA-Binding Proteins; Fibroblasts; Genes, myc; Methylation; Molecular Sequence Data; Oligonucleotides; Phenanthrolines; Promoter Regions, Genetic; Proto-Oncogene Proteins c-myc; Repetitive Sequences, Nucleic Acid; Thymine; Transcription, Genetic | 1990 |
Effect of nucleotide substitution on the peptidyltransferase activity of 2'(3')-O-(aminoacyl) oligonucleotides.
Topics: Acyltransferases; Base Sequence; Binding Sites; Cytosine; Guanine; Oligonucleotides; Peptidyl Transferases; RNA, Transfer, Amino Acyl | 1990 |
A.T and C.C+ base pairs can form simultaneously in a novel multistranded DNA complex.
Topics: Adenine; Base Composition; Base Sequence; Centrifugation; Circular Dichroism; Cytosine; DNA; Molecular Sequence Data; Molecular Structure; Nucleic Acid Conformation; Oligonucleotides; Polynucleotides; Thymine | 1990 |
The asymmetric methylation of CG palindromic dinucleotides increases sister-chromatid exchanges.
Topics: Aedes; Animals; Azacitidine; Base Sequence; Cell Cycle; Cell Line; Cricetinae; Cricetulus; Cytosine; Dinucleoside Phosphates; Female; Guanine; Methylation; Oligonucleotides; Ovary; Sister Chromatid Exchange | 1988 |
A Monte Carlo simulation study of the influence of internal motions on the molecular conformation deduced from two-dimensional NMR experiments.
Topics: Cytosine; Magnetic Resonance Spectroscopy; Monte Carlo Method; Nucleic Acid Conformation; Oligonucleotides; Operations Research; Quinine | 1989 |
Hairpin formation of d(CGCG-TA-CGCG), d(CGCG-TG-CGCG) and their cytosine methylated analogs.
Topics: Base Sequence; Chemical Phenomena; Chemistry; Cytosine; DNA; Methylation; Molecular Sequence Data; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Temperature; Thermodynamics | 1989 |
Nonsense and missense mutations in hemophilia A: estimate of the relative mutation rate at CG dinucleotides.
Topics: Adolescent; Adult; Antigens; Base Sequence; Cytosine; Dinucleoside Phosphates; DNA; DNA Restriction Enzymes; Factor VIII; Female; Genes; Guanine; Hemophilia A; Humans; Leukocytes; Male; Middle Aged; Molecular Sequence Data; Mutation; Oligonucleotides; Pedigree; Polymorphism, Genetic | 1988 |
Drug recognition of DNA. Proposal for GC minor groove specific ligands: vinylexins.
Topics: Base Sequence; Chemical Phenomena; Chemistry, Physical; Cytosine; DNA; Guanine; Hydrogen Bonding; Ligands; Molecular Structure; Nucleic Acid Conformation; Oligonucleotides; Protons | 1988 |
A systematic study of patterns of hydration in nucleic acids:(I) guanine and cytosine.
Topics: Crystallography; Cytosine; Guanine; Nucleic Acid Conformation; Oligonucleotides; Thermodynamics; Water | 1988 |
[Characteristics of the distribution of 5-methylcytosine in pyrimidine isoplites of different DNAs, methylated in the heterologous DNA-methylase reaction].
Topics: Animals; Cattle; Cell-Free System; Cytosine; DNA; DNA, Bacterial; Escherichia coli; Methylation; Methyltransferases; Oligonucleotides; Pseudomonas fluorescens; Pyrimidine Nucleotides; Thymus Gland | 1973 |
Modification of cytidine residues with a bisulfite-O-methylhydroxylamine mixture.
Topics: Animals; Carbon Radioisotopes; Chickens; Chromatography, Ion Exchange; Chromatography, Paper; Chromatography, Thin Layer; Circular Dichroism; Cytidine; Cytosine; DNA; Drug Stability; Electrophoresis, Paper; Erythrocytes; Hydrogen-Ion Concentration; Hydroxylamines; Kinetics; Nucleic Acid Denaturation; Oligonucleotides; Phosphoric Diester Hydrolases; Ribonucleases; Snakes; Spectrophotometry, Ultraviolet; Stereoisomerism; Sulfites; Sulfonic Acids; Venoms | 1974 |
Studies on the formation of transfer ribonucleic acid-ribosome complexes. XXIV. Effects of antibiotics on binding of aminoacyl-oligonucleotides to ribosomes.
Topics: Adenine Nucleotides; Amides; Amino Acids; Amino Sugars; Anti-Bacterial Agents; Binding Sites; Carbon Isotopes; Cytosine; Cytosine Nucleotides; Escherichia coli; Glycosides; Lactones; Leucomycins; Lincomycin; Mathematics; Nucleosides; Nucleotides; Oligonucleotides; Phenylalanine; Puromycin; Pyrimidines; Ribosomes; RNA, Transfer | 1973 |
Stability of RNA hairpin loops: A 6 -C m -U 6 .
Topics: Adenine; Base Sequence; Chromatography; Circular Dichroism; Cytosine; Models, Biological; Nucleic Acid Conformation; Oligonucleotides; RNA; Spectrophotometry; Thermodynamics; Uracil | 1973 |
[Distribution of 5-methylcytosine in phage DD7 DNA].
Topics: Chromatography, DEAE-Cellulose; Coliphages; Cytosine; DNA, Viral; Methylation; Oligonucleotides; Pyrimidine Nucleotides; Tritium | 1973 |
Absence of polyadenylic acid from reovirus messenger ribonucleic acid.
Topics: Adenine Nucleotides; Base Sequence; Chromatography, DEAE-Cellulose; Chromosomes; Cytosine; Electrophoresis, Polyacrylamide Gel; Filtration; L Cells; Nucleic Acid Hybridization; Oligonucleotides; Oxidation-Reduction; Phosphorus Radioisotopes; Polynucleotides; Protein Biosynthesis; Reoviridae; RNA, Messenger; RNA, Viral; Tritium; Uracil Nucleotides | 1973 |
[Effect of dexamethasone on the 5-methylcytosine content and degree of pyrimidine blocking in rat liver DNA].
Topics: Animals; Cytosine; Dexamethasone; DNA; Liver; Methylation; Oligonucleotides; Pyrimidine Nucleotides; Rats; Spleen | 1973 |
Pyrimidine tract analysis of the deoxyribonucleic acid of chick embryo lethal orphan virus.
Topics: Adenoviridae; Aniline Compounds; Centrifugation, Density Gradient; Chromatography, DEAE-Cellulose; Cytosine; DNA, Viral; Formates; Nucleic Acid Denaturation; Nucleotides; Oligonucleotides; Oncogenic Viruses; Phosphorus Isotopes; Pyrimidine Nucleotides; Species Specificity; Thymine | 1972 |
The genes for silk fibroin in Bombyx mori.
Topics: Base Sequence; Bombyx; Centrifugation, Density Gradient; Cytosine; DNA; Fibroins; Genes, Regulator; Guanine; Molecular Weight; Nucleic Acid Hybridization; Oligonucleotides; Phosphorus Isotopes; Polyploidy; Protein Biosynthesis; RNA, Messenger; RNA, Ribosomal; Silver; Transcription, Genetic | 1972 |
Methylation of either cytosine in the recognition sequence CGCG inhibits ThaI cleavage of DNA.
Topics: 5-Methylcytosine; Adenoma; Animals; Azacitidine; Base Sequence; Cell Line; Cytosine; Deoxyribonucleases, Type II Site-Specific; DNA Restriction Enzymes; DNA, Neoplasm; Methylation; Oligodeoxyribonucleotides; Oligonucleotides; Pituitary Neoplasms; Rats; Substrate Specificity | 1984 |
The 5'-cytosine in CCGG1 is methylated in two eukaryotic DNAs and Msp I is sensitive to methylation at this site.
Topics: 5-Methylcytosine; Animals; Base Sequence; Cattle; Cytosine; Deoxyribonucleases; DNA; DNA Restriction Enzymes; DNA, Neoplasm; Liver; Liver Neoplasms, Experimental; Oligodeoxyribonucleotides; Oligonucleotides; Rats | 1980 |
The B----Z transition in two synthetic oligonucleotides: d(C-2-amino-ACGTG) and d(m5CGCAm5CGTGCG) studied by IR, NMR and CD spectroscopies.
Topics: 5-Methylcytosine; Base Sequence; Circular Dichroism; Cytosine; Deoxyadenosines; Magnetic Resonance Spectroscopy; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; Spectrophotometry, Infrared; Structure-Activity Relationship | 1984 |
Sequence dependence of conformations of self-complementary duplex tetradeoxynucleotides containing cytosine and guanine.
Topics: Base Sequence; Cytosine; Guanosine; Nucleic Acid Conformation; Oligonucleotides; Polydeoxyribonucleotides; Spectrum Analysis, Raman | 1984 |
DNA methylation versus gene expression.
Topics: 5-Methylcytosine; Animals; Cytosine; Dinucleoside Phosphates; DNA; DNA Replication; DNA, Ribosomal; Gene Expression Regulation; Genes; Methylation; Oligonucleotides; Transcription, Genetic; Xenopus laevis | 1984 |
Conformation of ribooligonucleotide duplexes containing an alternating C-G sequence which show an unusual circular dichroism spectrum.
Topics: Base Sequence; Circular Dichroism; Cytosine; Guanine; Magnetic Resonance Spectroscopy; Nucleic Acid Conformation; Oligonucleotides; Oligoribonucleotides; Structure-Activity Relationship; Temperature | 1984 |
AT base pairs are less stable than GC base pairs in Z-DNA: the crystal structure of d(m5CGTAm5CG).
Topics: Adenine; Base Composition; Cytosine; DNA; Drug Stability; Guanine; Models, Molecular; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; Thymine | 1984 |
Short oligodeoxynucleotides with d(G-C)n sequence do not assume left-handed conformation in high salt conditions.
Topics: Base Sequence; Circular Dichroism; Cytosine; Guanine; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; Osmolar Concentration | 1984 |
Interaction of platinum compounds with short oligodeoxynucleotides containing guanine and cytosine.
Topics: Binding Sites; Chemical Phenomena; Chemistry; Circular Dichroism; Cytosine; Guanine; Magnetic Resonance Spectroscopy; Oligodeoxyribonucleotides; Oligonucleotides; Platinum; Temperature | 1983 |
Backbone conformations in nucleic acids: the occurrence of g+g+ internucleotide phosphodiester conformation.
Topics: Cytosine; Dinucleoside Phosphates; Guanine; Nucleic Acid Conformation; Oligonucleotides; Thermodynamics | 1982 |
Molecular structure of (m5 dC-dG)3: the role of the methyl group on 5-methyl cytosine in stabilizing Z-DNA.
Topics: 5-Methylcytosine; Base Sequence; Cytosine; DNA; Models, Molecular; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; X-Ray Diffraction | 1982 |
Binding of wheat germ ribosomes to bisulfite-modified reovirus messenger RNA: evidence for a scanning mechanism.
Topics: Base Sequence; Codon; Cytosine; Oligonucleotides; Peptide Chain Initiation, Translational; Protein Biosynthesis; Reoviridae; Ribosomes; RNA, Messenger; RNA, Viral; Sulfites; Triticum; Uracil | 1980 |
Synthesis of 4-triazolopyrimidinone nucleotide and its application in synthesis of 5-methylcytosine-containing oligodeoxyribonucleotides.
Topics: 5-Methylcytosine; Cytosine; Indicators and Reagents; Methods; Oligodeoxyribonucleotides; Oligonucleotides; Phosphorylation; Pyrimidinones; Triazoles | 1981 |
5-Methylcytosine in the highly repetitive DNA's of the guinea pig (Cavia porcellus).
Topics: 5-Methylcytosine; Animals; Base Sequence; Cytosine; DNA, Satellite; Guinea Pigs; Oligonucleotides; Pyrimidine Nucleotides | 1980 |
Nearest-neighbor and next-nearest-neighbor effects in the proton NMR spectra of the oligoribonucleotides ApGpX and CpApX.
Topics: Adenine; Chemical Phenomena; Chemistry, Physical; Cytosine; Guanine; Magnetic Resonance Spectroscopy; Oligonucleotides; Oligoribonucleotides; Protons; Spectrum Analysis; Temperature; Uracil | 1980 |
Methylation of slipped duplexes, snapbacks and cruciforms by human DNA(cytosine-5)methyltransferase.
Topics: Base Composition; Base Sequence; Cytosine; DNA; DNA (Cytosine-5-)-Methyltransferases; Enzyme Activation; Humans; Methylation; Molecular Sequence Data; Oligonucleotides; Substrate Specificity | 1995 |
Replacement of the conserved G.U with a G-C pair at the cleavage site of the Tetrahymena ribozyme decreases binding, reactivity, and fidelity.
Topics: Animals; Base Composition; Base Sequence; Catalysis; Cytosine; Guanine; Hot Temperature; Introns; Kinetics; Molecular Sequence Data; Nucleic Acid Denaturation; Oligonucleotides; RNA Splicing; RNA, Catalytic; RNA, Protozoan; Tetrahymena; Uridine | 1994 |
Promoter function of the human glucose-6-phosphate dehydrogenase gene depends on two GC boxes that are cell specifically controlled.
Topics: Base Sequence; Carcinoma, Hepatocellular; Cytosine; DNA-Binding Proteins; Gene Expression Regulation, Enzymologic; Glucosephosphate Dehydrogenase; Guanine; HeLa Cells; Humans; Liver Neoplasms; Molecular Sequence Data; Mutagenesis, Site-Directed; Nuclear Proteins; Oligonucleotides; Point Mutation; Promoter Regions, Genetic; Sp1 Transcription Factor; Structure-Activity Relationship; Transcription Factor AP-2; Transcription Factors; Transfection; Tumor Cells, Cultured | 1994 |
Binding of T and T analogs to CG base pairs in antiparallel triplexes.
Topics: Base Composition; Base Sequence; Cytosine; Drug Stability; Guanine; Molecular Sequence Data; Molecular Structure; Oligonucleotides; Oxygen; Structure-Activity Relationship; Thymidine; Thymine | 1994 |
[Intensification of genomic dactyloscopy by means of hybridization with modified oligonucleotides, forming duplexes with increased stability].
Topics: 2-Aminopurine; 5-Methylcytosine; Cytosine; DNA Fingerprinting; Nucleic Acid Hybridization; Oligonucleotides | 1993 |
Structure and thermodynamics of nonalternating C.G base pairs in Z-DNA: the 1.3-A crystal structure of the asymmetric hexanucleotide d(m5CGGGm5CG).d(m5CGCCm5CG).
Topics: Base Composition; Base Sequence; Chemical Phenomena; Chemistry, Physical; Computer Simulation; Crystallization; Crystallography, X-Ray; Cytosine; DNA; Guanine; Models, Molecular; Molecular Sequence Data; Molecular Structure; Nucleic Acid Conformation; Oligonucleotides; Thermodynamics | 1993 |
The crystal structure of N4-methylcytosine.guanosine base-pairs in the synthetic hexanucleotide d(CGCGm4CG).
Topics: Base Composition; Cytosine; Guanosine; Hydrogen Bonding; Methylation; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Water; X-Ray Diffraction | 1993 |
Probing CpG methylation at CACGTG with BbrPI restriction enzyme.
Topics: Base Sequence; Binding Sites; Cytosine; Deoxyribonucleases, Type II Site-Specific; Dinucleoside Phosphates; Guanine; Methylation; Oligonucleotides | 1993 |
8-Methoxypsoralen photoadduct formation in complementary oligonucleotides containing a cross-linkable site.
Topics: Adenine; Base Composition; Chromatography, High Pressure Liquid; Cross-Linking Reagents; Cytosine; DNA Adducts; Guanine; Light; Methoxsalen; Oligonucleotides; Photosensitizing Agents; Thymine; Tritium; Ultraviolet Rays | 1995 |
Extended DNA-recognition repertoire of peptide nucleic acid (PNA): PNA-dsDNA triplex formed with cytosine-rich homopyrimidine PNA.
Topics: Circular Dichroism; Cytosine; DNA; Kinetics; Nucleic Acid Conformation; Oligonucleotides; Peptides; Purines; Pyrimidines | 1997 |
Control of methylation spreading in synthetic DNA sequences by the murine DNA methyltransferase.
Topics: 5-Methylcytosine; Animals; Base Sequence; Binding Sites; Cytosine; Dinucleoside Phosphates; DNA; DNA Methylation; DNA, Single-Stranded; Kinetics; Methyltransferases; Mice; Molecular Sequence Data; Oligonucleotides; Recombinant Proteins | 1997 |
Sp1 binding is inhibited by (m)Cp(m)CpG methylation.
Topics: Binding Sites; Cytosine; DNA Methylation; Molecular Sequence Data; Oligonucleotides; Retinoblastoma Protein; Sp1 Transcription Factor | 1997 |
Recognition of GC base pairs by triplex forming oligonucleotides containing nucleosides derived from 2-aminopyridine.
Topics: 5-Methylcytosine; Aminopyridines; Base Composition; Cytosine; DNA Footprinting; Hydrogen Bonding; Hydrogen-Ion Concentration; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Polydeoxyribonucleotides; Substrate Specificity | 1997 |
Beyond guanine quartets: cation-induced formation of homogenous and chimeric DNA tetraplexes incorporating iso-guanine and guanine.
Topics: Cations; Cross-Linking Reagents; Cytosine; DNA; Electrophoresis, Polyacrylamide Gel; Genome; Guanine; Mutagenesis; Oligonucleotides; Photochemistry; Spectrophotometry, Ultraviolet | 1997 |
Association of branched oligonucleotides into the i-motif.
Topics: Base Composition; Circular Dichroism; Cytosine; Hydrogen-Ion Concentration; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Conformation; Oligonucleotides; Temperature; Ultraviolet Rays | 1997 |
D-2-deoxyribose and D-arabinose, but not D-ribose, stabilize the cytosine tetrad (i-DNA) structure.
Topics: Arabinose; Carbohydrates; Cytosine; Deoxyribose; DNA; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Phosphates; Ribose | 1997 |
Nitric oxide-induced deamination of cytosine and guanine in deoxynucleosides and oligonucleotides.
Topics: Cytosine; Deamination; Guanine; Hydrolysis; Kinetics; Nitric Oxide; Nucleosides; Oligonucleotides | 1998 |
Inhibition of PNA triplex formation by N4-benzoylated cytosine.
Topics: Benzoates; Cytosine; Oligonucleotides; Peptides | 1998 |
The human T-cell leukemia virus-1 transcriptional activator Tax enhances cAMP-responsive element-binding protein (CREB) binding activity through interactions with the DNA minor groove.
Topics: Cyclic AMP Response Element-Binding Protein; Cytosine; Dimerization; DNA; DNA Footprinting; Gene Products, tax; Human T-lymphotropic virus 1; Humans; Inosine; Kinetics; Models, Molecular; Oligonucleotides; Phenanthrolines; Repetitive Sequences, Nucleic Acid; Spectrometry, Fluorescence | 1998 |
Opposite base-dependent excision of 7,8-dihydro-8-oxoadenine by the Ogg1 protein of Saccharomyces cerevisiae.
Topics: 5-Methylcytosine; Adenine; Bacterial Proteins; Cytosine; DNA; DNA Glycosylases; DNA Repair; DNA-Formamidopyrimidine Glycosylase; Escherichia coli; Escherichia coli Proteins; Fungal Proteins; Humans; N-Glycosyl Hydrolases; Oligonucleotides; Purines; Pyridines; Saccharomyces cerevisiae | 1998 |
Structural constraints in the HIV-1 reverse transcriptase-primer/template complex for the initiation of DNA synthesis from primer tRNALys3.
Topics: Binding Sites; Cytosine; DNA, Viral; HIV Reverse Transcriptase; Kinetics; Oligonucleotides; Poly A; RNA; RNA, Transfer, Lys; Templates, Genetic; Thymine | 1998 |
5-Methylcytosine in CpG sites and the reactivity of nearest neighboring guanines toward the carcinogen aflatoxin B1-8,9-epoxide.
Topics: 5-Methylcytosine; Aflatoxin B1; Carcinogens; Cytosine; Gene Expression Regulation, Neoplastic; Genes, p53; Guanine; Humans; Oligonucleotides | 1999 |
Base pairing of anhydrohexitol nucleosides with 2,6-diaminopurine, 5-methylcytosine and uracil asbase moiety.
Topics: 2-Aminopurine; 5-Methylcytosine; Arabinonucleosides; Base Pairing; Cytosine; Models, Molecular; Nucleic Acid Denaturation; Nucleosides; Oligonucleotides; Purine Nucleosides; Pyrimidine Nucleosides; Sugar Alcohols; Uracil | 1999 |
Modeling of angiogenin - 3-NMP complex.
Topics: Animals; Cattle; Computer Simulation; Cytosine; Molecular Conformation; Oligonucleotides; Protein Binding; Proteins; Ribonuclease, Pancreatic; Uracil | 1998 |
Induction of reversible complexes between eukaryotic DNA topoisomerase I and DNA-containing oxidative base damages. 7, 8-dihydro-8-oxoguanine and 5-hydroxycytosine.
Topics: Camptothecin; Cytosine; DNA; DNA Damage; DNA Topoisomerases, Type I; DNA-Binding Proteins; Guanosine; Humans; Kinetics; Molecular Structure; Mutation; Oligonucleotides; Oxidative Stress | 1999 |
Determination of fluorescent probe orientations on biomolecules by conformational searching: algorithm testing and applications to the atomic model of myosin.
Topics: Crystallography, X-Ray; Cytosine; Energy Transfer; Fluorescence Polarization; Fluorescent Dyes; Models, Molecular; Molecular Conformation; Muscle, Skeletal; Myosins; Oligonucleotides; Pentetic Acid; Protein Structure, Secondary; Ribonuclease, Pancreatic; Spectrometry, Fluorescence; Sulfhydryl Compounds; Terbium; X-Ray Diffraction | 1999 |
Implications of cytosine methylation on (+)-anti-Benzo[a]pyrene 7, 8-dihydrodiol 9,10-epoxide N(2)-dG adduct formation in 5'-d(CGT), 5'-d(CGA), and 5'-d(CGC) sequence contexts of single- and double-stranded oligonucleotides.
Topics: 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide; Base Sequence; Carcinogens; Cytosine; Deoxyguanosine; DNA; DNA Adducts; DNA, Single-Stranded; Methylation; Molecular Sequence Data; Oligonucleotides; Thermodynamics | 1999 |
Novel subtype of type IIs restriction enzymes. BfiI endonuclease exhibits similarities to the EDTA-resistant nuclease Nuc of Salmonella typhimurium.
Topics: Amino Acid Sequence; Bacterial Proteins; Catalytic Domain; Cloning, Molecular; Cytosine; Deoxyribonucleases, Type II Site-Specific; DNA Methylation; DNA Restriction Enzymes; DNA-Cytosine Methylases; DNA, Complementary; Dose-Response Relationship, Drug; Edetic Acid; Endonucleases; Hydrogen-Ion Concentration; Hydrolysis; Kinetics; Magnesium; Micrococcal Nuclease; Molecular Sequence Data; Mutagenesis, Site-Directed; Nitrophenols; Oligonucleotides; Plasmids; Protein Folding; Protein Structure, Tertiary; Salmonella typhimurium; Sequence Analysis, DNA; Sequence Homology, Amino Acid; Sulfites; Time Factors | 2000 |
A novel action of human apurinic/apyrimidinic endonuclease: excision of L-configuration deoxyribonucleoside analogs from the 3' termini of DNA.
Topics: Anions; Antineoplastic Agents; Antiviral Agents; Blotting, Western; Carbon-Oxygen Lyases; Cations; Chromatography, Agarose; Chromatography, Ion Exchange; Cytarabine; Cytosine; Deoxycytidine; Deoxycytidine Monophosphate; Deoxyribonuclease IV (Phage T4-Induced); Dioxolanes; DNA; DNA-(Apurinic or Apyrimidinic Site) Lyase; Electrophoresis, Polyacrylamide Gel; Endonucleases; Humans; Oligonucleotides; Recombinant Proteins; Reverse Transcriptase Inhibitors; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Stereoisomerism; Thionucleosides; Tumor Cells, Cultured; Zalcitabine | 2000 |
Steric control of DNA interstrand cross-link sites of trans platinum complexes: specificity can be dictated by planar nonleaving groups.
Topics: Antineoplastic Agents; Base Sequence; Cisplatin; Cross-Linking Reagents; Cytosine; DNA; DNA Adducts; DNA Footprinting; Guanine; Ligands; Nucleic Acid Conformation; Oligonucleotides; Quinolines; Stereoisomerism; Structure-Activity Relationship; Thiazoles | 2000 |
Products from polycrystalline DNA constituents after X-irradiation and heavy-ion bombardment: formation of the 5,6-dihydroadduct in thymidine 5'-monophosphate and release of unaltered bases in nucleotides.
Topics: Adenine; Chromatography, High Pressure Liquid; Cytosine; DNA; DNA Adducts; Dose-Response Relationship, Radiation; Guanine; Heavy Ions; Magnetic Resonance Spectroscopy; Models, Chemical; Oligonucleotides; Thymidine Monophosphate; X-Rays | 2000 |
Differential destabilization of the DNA oligonucleotide double helix by a T.G mismatch, 3,N(4)-ethenocytosine, 3,N(4)-ethanocytosine, or an 8-(hydroxymethyl)-3,N(4)-ethenocytosine adduct incorporated into the same sequence contexts.
Topics: Base Pair Mismatch; Base Sequence; Cytosine; DNA Adducts; DNA-Binding Proteins; Guanine; Molecular Sequence Data; Oligonucleotides; Thermodynamics; Thymine | 2000 |
Invasion of strongly binding oligonucleotides into tRNA structure.
Topics: 2-Aminopurine; 5-Methylcytosine; Cytosine; Deoxyuridine; Electrophoresis, Polyacrylamide Gel; Kinetics; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; RNA, Transfer, Phe; Time Factors; Yeasts | 2000 |
Parallel self-associated structures formed by T,C-rich sequences at acidic pH.
Topics: Acids; Base Pairing; Base Sequence; Cytosine; Deoxyribonucleases, Type II Site-Specific; DNA; Electrophoresis, Agar Gel; Hot Temperature; Hydrogen-Ion Concentration; Magnesium Chloride; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Pyrimidine Nucleotides; Sodium Chloride; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet; Spectroscopy, Fourier Transform Infrared; Sugar Phosphates; Thymine | 2000 |
Evidence that cytosine residues within 5'-CCTGG-3' pentanucleotides can be methylated in human DNA independently of the methylating system that modifies 5'-CG-3' dinucleotides.
Topics: Animals; Base Sequence; Blotting, Southern; Cytosine; DNA; DNA Methylation; DNA Probes; Humans; MyoD Protein; Oligonucleotides | 2000 |
Elongation of tandem repetitive DNA by the DNA polymerase of the hyperthermophilic archaeon Thermococcus litoralis at a hairpin-coil transitional state: a model of amplification of a primordial simple DNA sequence.
Topics: Base Composition; Base Sequence; Cytosine; DNA Replication; DNA-Directed DNA Polymerase; DNA, Archaeal; Gene Amplification; Guanosine; Hot Temperature; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Tandem Repeat Sequences; Temperature; Thermococcus | 2000 |
Nonenzymatic oligomerization on templates containing phosphodiester-linked acyclic glycerol nucleic acid analogues.
Topics: Base Sequence; Cytosine; Guanosine Monophosphate; Nucleic Acid Conformation; Oligonucleotides; Organophosphates; Temperature; Templates, Genetic; Thermodynamics | 2000 |
Characterization of carrot nuclear proteins that exhibit specific binding affinity towards conventional and non-conventional DNA methylation.
Topics: 5-Methylcytosine; Binding, Competitive; Cell Differentiation; Cell Division; Cytosine; Daucus carota; DNA Methylation; DNA-Binding Proteins; DNA, Plant; Molecular Weight; Nuclear Proteins; Oligonucleotides; Plant Proteins; Protein Binding | 2000 |
Effect of chemical modifications of cytosine and guanine in a CpG-motif of oligonucleotides: structure-immunostimulatory activity relationships.
Topics: Animals; Base Sequence; Cytosine; Dideoxynucleosides; Drug Design; Female; Guanine; Injections, Intraperitoneal; Lymphocyte Activation; Lymphocytes; Mice; Mice, Inbred BALB C; Oligonucleotides; Spleen; Splenomegaly; Structure-Activity Relationship | 2001 |
Escherichia coli Nth and human hNTH1 DNA glycosylases are involved in removal of 8-oxoguanine from 8-oxoguanine/guanine mispairs in DNA.
Topics: Base Pair Mismatch; Cytosine; Deoxyribonuclease (Pyrimidine Dimer); DNA Repair; DNA-Formamidopyrimidine Glycosylase; Endodeoxyribonucleases; Escherichia coli; Escherichia coli Proteins; Guanine; Humans; N-Glycosyl Hydrolases; Nucleic Acid Heteroduplexes; Oligonucleotides; Recombination, Genetic | 2001 |
Importance of specific nucleotides in the folding of the natural form of the hairpin ribozyme.
Topics: 2-Aminopurine; Adenine; Base Composition; Base Sequence; Carbocyanines; Cytosine; Deoxyribonucleosides; Energy Transfer; Fluorescein; Fluorescent Dyes; Guanine; Hydrolysis; Molecular Sequence Data; Nepovirus; Nucleic Acid Conformation; Oligonucleotides; Point Mutation; Purine Nucleotides; Ribose; RNA, Catalytic; Spectrometry, Fluorescence; Uridine | 2001 |
Requirement of CHROMOMETHYLASE3 for maintenance of CpXpG methylation.
Topics: Alleles; Amino Acid Sequence; Arabidopsis; Arabidopsis Proteins; Base Sequence; Chromosome Mapping; Cloning, Molecular; CpG Islands; Crosses, Genetic; Cytosine; Dinucleoside Phosphates; DNA Methylation; DNA-Cytosine Methylases; Gene Expression Regulation, Plant; Gene Silencing; Genes, Plant; Molecular Sequence Data; Mutagenesis; Oligonucleotides; Phenotype; Protein Structure, Tertiary; Retroelements; Transcription Factors | 2001 |
Structure of a C-rich strand fragment of the human centromeric satellite III: a pH-dependent intercalation topology.
Topics: Base Sequence; Centromere; Cytosine; DNA, Satellite; Humans; Hydrogen-Ion Concentration; Intercalating Agents; Models, Molecular; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Conformation; Oligonucleotides; Protons | 2001 |
Structural dynamics and cation interactions of DNA quadruplex molecules containing mixed guanine/cytosine quartets revealed by large-scale MD simulations.
Topics: Base Sequence; Cations, Monovalent; Computer Simulation; Cytosine; DNA; Guanine; Models, Chemical; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Potassium Chloride; Sodium Chloride; Solutions; Thermodynamics; Thymidine | 2001 |
Imino proton exchange and base-pair kinetics in RNA duplexes.
Topics: Ammonia; Base Pairing; Catalysis; Cytosine; Guanine; Hydrogen-Ion Concentration; Imines; Kinetics; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Denaturation; Nucleic Acid Heteroduplexes; Oligonucleotides; Protons; RNA; Thermodynamics; Thymine; Uridine | 2001 |
The HAP1 protein stimulates the turnover of human mismatch-specific thymine-DNA-glycosylase to process 3,N(4)-ethenocytosine residues.
Topics: Binding Sites; Carbon-Oxygen Lyases; Cytosine; Deoxyribonuclease (Pyrimidine Dimer); Deoxyribonuclease IV (Phage T4-Induced); DNA Ligases; DNA Repair; DNA-(Apurinic or Apyrimidinic Site) Lyase; DNA-Formamidopyrimidine Glycosylase; Dose-Response Relationship, Drug; Endodeoxyribonucleases; Enzyme Activation; Escherichia coli Proteins; Humans; Magnesium; N-Glycosyl Hydrolases; Oligonucleotides; Protein Binding; Surface Plasmon Resonance; Two-Hybrid System Techniques | 2001 |
Nonenzymatic template-directed synthesis on hairpin oligonucleotides. 3. Incorporation of adenosine and uridine residues.
Topics: Adenine; Adenosine; Base Composition; Base Sequence; Cytidine Monophosphate; Cytosine; Guanine; Guanosine Monophosphate; Molecular Sequence Data; Oligonucleotides; Polymers; Templates, Genetic; Thymidine; Thymine; Uridine | 1992 |
Gram-positive bacteria: possible photosynthetic ancestry.
Topics: Bacteria; Base Sequence; Biological Evolution; Chlorobi; Chlorophyll; Cyanobacteria; Cytosine; DNA, Bacterial; Gram-Positive Bacteria; Guanine; Molecular Sequence Data; Oligonucleotides; Photosynthesis; RNA, Bacterial; RNA, Ribosomal, 16S; Sequence Homology, Nucleic Acid | 1985 |
Template-directed synthesis of novel, nucleic acid-like structures.
Topics: Cytosine; Deoxyguanine Nucleotides; Evolution, Molecular; Guanine; Nucleic Acids; Oligonucleotides; Origin of Life; Poly C; Poly U; Templates, Genetic | 1985 |
The Deinococcus-Thermus phylum and the effect of rRNA composition on phylogenetic tree construction.
Topics: Bacteria; Base Sequence; Biological Evolution; Cytosine; Guanine; Molecular Sequence Data; Oligonucleotides; Phylogeny; RNA, Bacterial; RNA, Ribosomal, 16S; Thermus | 1989 |
Mutagenicity of a single 1-nitropyrene-DNA adduct N-(deoxyguanosin-8-yl)-1-aminopyrene in Escherichia coli located in a GGC sequence.
Topics: Bacteriophage M13; Cytosine; Deoxyguanosine; DNA Adducts; DNA Mutational Analysis; Escherichia coli; Frameshift Mutation; Genome, Viral; Guanine; Mutagenicity Tests; Mutagens; Nucleic Acid Hybridization; Oligonucleotides; Pyrenes; Trinucleotide Repeats | 2001 |
Interaction of an acridine dimer with DNA quadruplex structures.
Topics: Acridines; Binding Sites; Bridged-Ring Compounds; Cytosine; Dimerization; DNA; DNA, Single-Stranded; Enzyme Inhibitors; Fluorescence; Fluorescent Dyes; G-Quadruplexes; Guanine; Humans; Kinetics; Ligands; Nucleic Acid Conformation; Oligonucleotides; Rhodamines; Spectrometry, Fluorescence; Telomerase; Telomere; Temperature | 2001 |
Parallel and antiparallel G*G.C base triplets in pur*pur.pyr triple helices formed with (GA) third strands.
Topics: Adenine; Base Sequence; Carbohydrate Conformation; Cations, Divalent; Cytosine; DNA; Guanine; Magnesium; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Purines; Pyrimidines; Sodium; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet; Temperature; Trinucleotide Repeats | 2001 |
Nuclease resistance of oligonucleotides containing the tricyclic cytosine analogues phenoxazine and 9-(2-aminoethoxy)-phenoxazine ("G-clamp") and origins of their nuclease resistance properties.
Topics: Animals; Cattle; Cytosine; Hydrolysis; Oligonucleotides; Oxazines | 2002 |
Disruption of HIV-1 integrase-DNA complexes by short 6-oxocytosine-containing oligonucleotides.
Topics: Binding, Competitive; Cytidine; Cytosine; DNA, Viral; HIV Integrase; HIV Integrase Inhibitors; HIV Long Terminal Repeat; Oligonucleotides; RNA Processing, Post-Transcriptional; RNA, Viral; Substrate Specificity; Thymine; Virus Integration | 2002 |
Selective cross-linking to the adenine of the TA interrupting site within the triple helix.
Topics: Adenine; Base Pairing; Cross-Linking Reagents; Cytosine; Deoxyribose; Indicators and Reagents; Nucleic Acid Denaturation; Oligonucleotides; Purines; Vinyl Compounds | 2002 |
Conformational changes of a benzo[a]pyrene diol epoxide-N(2)-dG adduct induced by a 5'-flanking 5-methyl-substituted cytosine in a (Me)CG double-stranded oligonucleotide sequence context.
Topics: 5-Methylcytosine; 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide; CpG Islands; Cytosine; Deoxyguanosine; DNA Adducts; Electrophoretic Mobility Shift Assay; Fluorescence; Hot Temperature; Methylation; Molecular Conformation; Oligonucleotides; Stereoisomerism | 2002 |
Minimum number of 2'-O-(2-aminoethyl) residues required for gene knockout activity by triple helix forming oligonucleotides.
Topics: Animals; CHO Cells; Cricetinae; Cricetulus; Cytosine; DNA; Electroporation; Gene Targeting; Hot Temperature; Hypoxanthine Phosphoribosyltransferase; Nucleic Acid Conformation; Oligonucleotides; Ribose; Thymidine | 2002 |
Endogenous DNA lesions can inhibit the binding of the AP-1 (c-Jun) transcription factor.
Topics: Adenine; Base Pair Mismatch; Binding, Competitive; Cytosine; DNA Damage; DNA Glycosylases; DNA-Binding Proteins; Humans; N-Glycosyl Hydrolases; Nucleic Acid Heteroduplexes; Oligonucleotides; Pentoxyl; Protein Binding; Proto-Oncogene Proteins c-jun; Thymine; Transcription Factor AP-1; Uracil; Uracil-DNA Glycosidase | 2002 |
Effect of divalent cations and cytosine protonation on thermodynamic properties of intermolecular DNA double and triple helices.
Topics: Calorimetry, Differential Scanning; Cations, Divalent; Circular Dichroism; Cytosine; DNA; Mathematics; Molecular Structure; Nucleic Acid Conformation; Oligonucleotides; Protons; Temperature | 2002 |
Guanine of the third strand of C.G*G triplex serves as an effective hole trap.
Topics: Base Pairing; Base Sequence; Circular Dichroism; Cytosine; DNA; Guanine; Kinetics; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Oligonucleotides; Oxidation-Reduction; Thermodynamics | 2002 |
Site-specific mutagenesis by triple helix-forming oligonucleotides containing a reactive nucleoside analog.
Topics: Cell Line, Transformed; Cytosine; DNA; DNA Adducts; Escherichia coli; Genes, Suppressor; Humans; Mutagenesis, Site-Directed; Mutation; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Plasmids; RNA, Transfer | 2003 |
Mammalian 8-oxoguanine DNA glycosylase 1 incises 8-oxoadenine opposite cytosine in nuclei and mitochondria, while a different glycosylase incises 8-oxoadenine opposite guanine in nuclei.
Topics: Adenine; Animals; Base Pairing; Base Sequence; Cell Line, Transformed; Cell Nucleus; Cytosine; DNA; DNA Repair; DNA-Formamidopyrimidine Glycosylase; Fibroblasts; Guanine; Humans; Liver; Magnesium; Male; Mice; Mice, Inbred C57BL; Mice, Knockout; Mitochondria; N-Glycosyl Hydrolases; Nucleic Acid Conformation; Oligonucleotides; Substrate Specificity | 2003 |
Effect of cytosine protonation and cation on thermodynamic properties of parallel DNA triplex family.
Topics: Base Sequence; Cations; Cytosine; DNA; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Protons; Thermodynamics | 2001 |
Crystal structure of an RNA.DNA hybrid reveals intermolecular intercalation: dimer formation by base-pair swapping.
Topics: Adenine; Crystallography, X-Ray; Cytosine; Dimerization; DNA; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Purines; RNA | 2003 |
Condensation reaction of hexanucleotides containing guanine and cytosine with water soluble carbodiimide.
Topics: Base Sequence; Carbodiimides; Chromatography, High Pressure Liquid; Chromatography, Ion Exchange; Cytosine; Guanine; Indicators and Reagents; Oligonucleotides; Solubility; Water | 2000 |
Interleukin-6 promoter haplotypes and interleukin-6 cytokine responses.
Topics: Adult; Aged; Alleles; Amino Acid Motifs; Cytokines; Cytosine; DNA; Dose-Response Relationship, Drug; Female; Genotype; Guanine; Haplotypes; Homozygote; Humans; Interleukin-6; Male; Middle Aged; Oligonucleotides; Polymorphism, Genetic; Polymorphism, Single Nucleotide; Promoter Regions, Genetic; Sequence Analysis, DNA | 2003 |
Repair of oxidized bases in DNA bubble structures by human DNA glycosylases NEIL1 and NEIL2.
Topics: Cytosine; Deoxyribonuclease (Pyrimidine Dimer); DNA; DNA Glycosylases; DNA Repair; DNA Replication; DNA-(Apurinic or Apyrimidinic Site) Lyase; DNA, Single-Stranded; Dose-Response Relationship, Drug; Escherichia coli; Humans; Kinetics; Models, Chemical; Mutation; Nucleic Acid Conformation; Oligonucleotides; Oxygen; Transcription, Genetic; Uracil | 2003 |
Association of DNA quadruplexes through G:C:G:C tetrads. Solution structure of d(GCGGTGGAT).
Topics: Base Composition; Base Sequence; Cytosine; DNA; G-Quadruplexes; Guanine; Hydrogen Bonding; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Conformation; Oligonucleotides; Protons; Recombination, Genetic; Sodium Chloride; Solutions; Thermodynamics | 2003 |
Partitioning of rearranged Ig genes by mutation analysis demonstrates D-D fusion and V gene replacement in the expressed human repertoire.
Topics: Antibody Diversity; Cytosine; DNA Mutational Analysis; Gene Expression Regulation; Gene Rearrangement, B-Lymphocyte, Heavy Chain; Genes, Immunoglobulin; Germ-Line Mutation; Guanine; Humans; Immunoglobulin Heavy Chains; Immunoglobulin Joining Region; Immunoglobulin M; Immunoglobulin Variable Region; Oligonucleotides; Point Mutation; Probability; Sequence Alignment | 2004 |
Hijacking of the human alkyl-N-purine-DNA glycosylase by 3,N4-ethenocytosine, a lipid peroxidation-induced DNA adduct.
Topics: Animals; Cytosine; DNA; DNA Adducts; DNA Damage; DNA Glycosylases; DNA Polymerase I; DNA Primers; DNA Repair; DNA, Single-Stranded; Escherichia coli; HeLa Cells; Humans; Kinetics; Lipid Peroxidation; Mice; Mutagens; NIH 3T3 Cells; Oligonucleotides; Protein Isoforms; Surface Plasmon Resonance; Time Factors | 2004 |
Altering the sequence specificity of HaeIII methyltransferase by directed evolution using in vitro compartmentalization.
Topics: Amino Acid Sequence; Catalysis; Cytosine; DNA; DNA Methylation; DNA-Cytosine Methylases; Gene Library; Hydrogen Bonding; Kinetics; Methylation; Methyltransferases; Models, Molecular; Molecular Sequence Data; Mutagenesis; Mutation; Oligonucleotides; Plasmids; Polymerase Chain Reaction; Protein Engineering; Sequence Homology, Amino Acid; Substrate Specificity; Time Factors | 2004 |
Arabidopsis MBD proteins show different binding specificities and nuclear localization.
Topics: Amino Acid Sequence; Arabidopsis; Arabidopsis Proteins; Base Sequence; Binding Sites; Cell Cycle Proteins; Cell Line; Cell Nucleus; Cytosine; DNA Methylation; DNA-Binding Proteins; E2F Transcription Factors; Gene Expression Regulation, Plant; Green Fluorescent Proteins; Luminescent Proteins; Microscopy, Confocal; Molecular Sequence Data; Nuclear Proteins; Oligonucleotides; Protein Binding; Protein Isoforms; Recombinant Fusion Proteins; Reverse Transcriptase Polymerase Chain Reaction; RNA, Plant; Sequence Homology, Amino Acid; Transcription Factors; Transfection | 2003 |
Synthesis and duplex DNA recognition studies of oligonucleotides containing a ureido isoindolin-1-one homo-N-nucleoside. A comparison of host-guest and DNA recognition studies.
Topics: Cytosine; DNA; Guanine; Indoles; Nucleic Acid Conformation; Oligonucleotides; Purine Nucleosides; Purines; Pyrimidines; Thermodynamics | 2004 |
Facile formation of an intrastrand cross-link lesion between cytosine and guanine upon pyrex-filtered UV light irradiation of d((Br)CG) and duplex DNA containing 5-bromocytosine.
Topics: Aerobiosis; Cross-Linking Reagents; Cytosine; DNA; DNA Damage; Guanine; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Conformation; Nucleic Acid Heteroduplexes; Oligonucleotides; Spectrometry, Mass, Electrospray Ionization; Ultraviolet Rays | 2004 |
Structural evidence of a passive base-flipping mechanism for beta-glucosyltransferase.
Topics: 5-Methylcytosine; Adenine; Asparagine; Aspartic Acid; Binding Sites; Catalysis; Crystallography, X-Ray; Cytosine; DNA; Glucosyltransferases; Kinetics; Models, Molecular; Mutagenesis, Site-Directed; Nucleic Acid Conformation; Oligonucleotides; Plasmids; Protein Binding; Protein Conformation; Uridine Diphosphate | 2004 |
Oxanine DNA glycosylase activity from Mammalian alkyladenine glycosylase.
Topics: Animals; Chromatography, High Pressure Liquid; Cytosine; DNA; DNA Glycosylases; DNA Polymerase beta; DNA, Single-Stranded; Guanine; Humans; Hypoxanthine; Mice; Mice, Knockout; Mutagenesis, Site-Directed; Nucleic Acid Hybridization; Nucleotides; Oligonucleotides; Protein Binding; Purine Nucleosides; Spleen; Swine; Thymus Gland; Time Factors; Xanthine | 2004 |
A methylated oligonucleotide induced methylation of GSTP1 promoter and suppressed its expression in A549 lung adenocarcinoma cells.
Topics: Apoptosis; Base Sequence; Cell Line, Tumor; Cell Survival; Cisplatin; CpG Islands; Cytosine; DNA Methylation; DNA Primers; Drug Resistance, Neoplasm; Flow Cytometry; Genetic Techniques; Glutathione Transferase; Guanine; Humans; Immunoblotting; Models, Genetic; Molecular Sequence Data; Oligonucleotides; Polymerase Chain Reaction; Promoter Regions, Genetic; RNA, Small Interfering; Time Factors; Transfection | 2004 |
Simple method for determining nucleobase pK(a) values by indirect labeling and demonstration of a pK(a) of neutrality in dsDNA.
Topics: Adenine; Base Pairing; Cytosine; DNA; DNA, Complementary; Guanine; Hydrogen-Ion Concentration; Kinetics; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Conformation; Oligonucleotides; Thionucleotides; Thymine | 2004 |
Synthesis and characterization of oligonucleotides containing 5-chlorocytosine.
Topics: Cytosine; Deamination; Formates; Hydrolysis; Mutagens; Oligonucleotides; Uracil | 2004 |
Lifetime regulation of the charge-separated state in DNA by modulating the oxidation potential of guanine in DNA through hydrogen bonding.
Topics: 1-Naphthylamine; Cytosine; DNA; Guanine; Hydrogen Bonding; Kinetics; Oligonucleotides; Oxidation-Reduction; Photochemistry; Photolysis | 2004 |
Duplex formation and the onset of helicity in poly d(CG)n oligonucleotides in a solvent-free environment.
Topics: Circular Dichroism; Cytosine; DNA; Guanine; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Poly C; Poly G; Spectrometry, Mass, Electrospray Ionization; Structure-Activity Relationship | 2004 |
Cytosine arabinoside substitution decreases transcription factor-DNA binding element complex formation.
Topics: Binding Sites; CCAAT-Enhancer-Binding Proteins; Cell Line, Tumor; Cytarabine; Cytosine; DNA-Binding Proteins; DNA, Neoplasm; HL-60 Cells; Humans; Macromolecular Substances; Oligonucleotides; Protein Binding; TATA-Box Binding Protein; Transcription Factor AP-2; Transcription Factors | 2004 |
Long-range oxidative damage to cytosines in duplex DNA.
Topics: Anthraquinones; Base Sequence; Binding Sites; Biophysical Phenomena; Biophysics; Cytosine; Diffusion; DNA; Electrons; Kinetics; Light; Models, Chemical; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Oligonucleotides; Oxidative Stress; Oxygen; Protein Structure, Tertiary; Pyrimidines; Time Factors | 2004 |
Effects of methylation of non-CpG sequence in the promoter region on the expression of human synaptotagmin XI (syt11).
Topics: Animals; Base Sequence; Binding Sites; Binding, Competitive; Calcium-Binding Proteins; Cell Line; Cell Line, Tumor; CHO Cells; CpG Islands; Cricetinae; Cricetulus; Cytosine; DNA; DNA Methylation; DNA-Binding Proteins; Electrophoretic Mobility Shift Assay; Gene Expression Regulation; Humans; Luciferases; Membrane Glycoproteins; Molecular Sequence Data; Nerve Tissue Proteins; Oligonucleotides; Plasmids; Polymerase Chain Reaction; Promoter Regions, Genetic; Sequence Analysis, DNA; Sp1 Transcription Factor; Sp3 Transcription Factor; Sulfites; Synaptotagmins; Transcription Factors; Transcription Initiation Site; Transcription, Genetic; Transfection | 2005 |
Investigating local conformations of double-stranded DNA by low-energy circular dichroism of pyrrolo-cytosine.
Topics: Circular Dichroism; Cytosine; DNA; Nucleic Acid Conformation; Nucleic Acid Probes; Oligonucleotides | 2005 |
Conformational properties of DNA containing (CCA)n and (TGG)n trinucleotide repeats.
Topics: Circular Dichroism; Cytosine; DNA; Edetic Acid; Electrophoresis, Polyacrylamide Gel; Genome, Human; Humans; Hydrogen-Ion Concentration; Microsatellite Repeats; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Polymorphism, Genetic; Potassium Chloride; Protein Conformation; Salts; Spectrophotometry; Temperature; Trinucleotide Repeats; Ultraviolet Rays | 2005 |
Recognition of CG inversions in DNA triple helices by methylated 3H-pyrrolo[2,3-d]pyrimidin-2(7H)-one nucleoside analogues.
Topics: Base Pairing; Cytosine; DNA; Guanine; Hydrogen Bonding; Nucleic Acid Conformation; Nucleosides; Oligonucleotides; Pyrimidinones; Thymine | 2005 |
Single nucleotide extension technology for quantitative site-specific evaluation of metC/C in GC-rich regions.
Topics: Base Composition; Base Pair Mismatch; Base Sequence; Cytosine; DNA Methylation; DNA Primers; GC Rich Sequence; Humans; Molecular Sequence Data; Oligonucleotides; Polymorphism, Genetic; Sequence Analysis, DNA; Sulfites; Templates, Genetic | 2005 |
Reelin promoter hypermethylation in schizophrenia.
Topics: Binding, Competitive; Cell Adhesion Molecules, Neuronal; CpG Islands; Cytosine; DNA; DNA Methylation; Extracellular Matrix Proteins; Gene Expression Regulation; Genes, Reporter; Humans; Kinetics; Models, Genetic; Nerve Tissue Proteins; Oligonucleotides; Promoter Regions, Genetic; Reelin Protein; RNA, Messenger; Schizophrenia; Sequence Analysis, DNA; Serine Endopeptidases; Sulfites; Time Factors; Transfection | 2005 |
Synthesis and degradation of nucleic Acid components by formamide and cosmic dust analogues.
Topics: Catalysis; Cosmic Dust; Cytosine; Formamides; Iron Compounds; Magnesium Compounds; Magnesium Silicates; Mass Spectrometry; Microscopy, Electron, Scanning; Nucleic Acids; Oligonucleotides; Purines; Silicates; Uracil | 2005 |
NMR studies on self-complementary oligonucleotides conjugated with methylene blue.
Topics: Base Composition; Base Sequence; Cytosine; Guanine; Methylene Blue; Models, Molecular; Molecular Structure; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Conformation; Oligonucleotides; Spectrophotometry, Ultraviolet; Temperature; Thermodynamics | 2005 |
The use of thymidine analogs to improve the replication of an extra DNA base pair: a synthetic biological system.
Topics: Base Pairing; Cytosine; DNA Polymerase I; DNA Primers; DNA Replication; Guanine; Oligonucleotides; Polymerase Chain Reaction; Thymidine; Thymine Nucleotides | 2005 |
Targeted cross-linking of the human beta-globin gene in living cells mediated by a triple helix forming oligonucleotide.
Topics: Adenine; Anemia, Sickle Cell; Base Sequence; Cross-Linking Reagents; Cytidine; Cytosine; DNA; Ficusin; Gene Targeting; Globins; Humans; Hydrogen-Ion Concentration; K562 Cells; Nucleic Acid Conformation; Oligonucleotides; Phosphates; Purines; Pyrimidines; Temperature; Tumor Cells, Cultured | 2006 |
Antisense targeting of CXXC finger protein 1 inhibits genomic cytosine methylation and primitive hematopoiesis in zebrafish.
Topics: Amino Acid Motifs; Amino Acid Sequence; Animals; Apoptosis; Cytosine; DNA Methylation; DNA-Binding Proteins; Dose-Response Relationship, Drug; Epigenesis, Genetic; Gene Expression Regulation, Developmental; Hematopoiesis; Molecular Sequence Data; Oligonucleotides; Oligonucleotides, Antisense; Trans-Activators; Zebrafish; Zebrafish Proteins | 2006 |
pH-Independent triplex formation: hairpin DNA containing isoguanine or 9-deaza-9-propynylguanine in place of protonated cytosine.
Topics: Base Sequence; Chromatography, High Pressure Liquid; Cytosine; DNA; Guanine; Hydrogen-Ion Concentration; Magnetic Resonance Spectroscopy; Molecular Sequence Data; Molecular Weight; Nucleic Acid Conformation; Oligonucleotides; Protons; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Transition Temperature | 2006 |
pH-Dependent mismatch discrimination of oligonucleotide duplexes containing 2'-deoxytubercidin and 2- or 7-substituted derivatives: protonated base pairs formed between 7-deazapurines and cytosine.
Topics: Amides; Base Pair Mismatch; Base Pairing; Cytosine; Hydrogen-Ion Concentration; Nucleosides; Oligonucleotides; Phosphoramides; Phosphoric Acids; Protons; Purines; Tubercidin | 2006 |
Encapsulation of mono- and oligo-nucleotides into aqueous-core nanocapsules in presence of various water-soluble polymers.
Topics: Cations; Chitosan; Cidofovir; Cyanoacrylates; Cytosine; Dideoxynucleotides; Drug Carriers; Enbucrilate; Materials Testing; Nanocapsules; Nucleotides; Oligonucleotides; Organophosphonates; Permeability; Polyethyleneimine; Polymers; Solubility; Thymine Nucleotides; Water; Zidovudine | 2007 |
Synthesis and triplex-forming properties of 2',4'-BNA derivatives bearing pyridines as an unnatural nucleobase.
Topics: Base Pairing; Cytosine; DNA; Guanine; Oligonucleotides; Pyridines; Temperature | 2005 |
Substituent effects on the in situ activation of the double activated cross-linking reaction.
Topics: Cross-Linking Reagents; Cytosine; Oligonucleotides; Purines; Vinyl Compounds | 2005 |
Toward the understanding of DNA fluorescence: the singlet excimer of cytosine.
Topics: Chemistry, Physical; Cytosine; Dimerization; DNA; Light; Microscopy, Fluorescence; Models, Chemical; Models, Molecular; Oligonucleotides; Time Factors; Ultraviolet Rays | 2006 |
Substrate specificity of human thymine-DNA glycosylase on exocyclic cytosine adducts.
Topics: Cytosine; DNA Adducts; Humans; Molecular Structure; Oligonucleotides; Substrate Specificity; Thymine DNA Glycosylase | 2007 |
Synthesis and oligonucleotide incorporation of fluorescent cytosine analogue tC: a promising nucleic acid probe.
Topics: Cytosine; Fluorescent Dyes; Molecular Structure; Nucleic Acid Probes; Oligonucleotides; Organophosphorus Compounds | 2007 |
Direct labeling of 5-methylcytosine and its applications.
Topics: 5-Methylcytosine; Cytosine; DNA Methylation; Electrochemistry; Electrodes; Genes, p53; Gold; Indicators and Reagents; Ligands; Magnetic Resonance Spectroscopy; Mass Spectrometry; Mutation; Oligonucleotides; Osmium Compounds; Oxidation-Reduction; Pyridines; Spectrometry, Fluorescence | 2007 |
Binding affinities of oligonucleotides and PNAs containing phenoxazine and G-clamp cytosine analogues are unusually sequence-dependent.
Topics: Base Sequence; Cytosine; Nucleic Acid Conformation; Oligonucleotides; Oxazines; Peptide Nucleic Acids | 2007 |
An i-motif-containing DNA device that breaks certain forms of Watson-Crick interactions.
Topics: Base Pairing; Cytosine; DNA; DNA, Circular; Electrophoresis, Polyacrylamide Gel; Hydrogen Bonding; Nucleic Acid Conformation; Oligonucleotides; Spectrometry, Fluorescence; Thermodynamics | 2007 |
An osmium-DNA interstrand complex: application to facile DNA methylation analysis.
Topics: 2,2'-Dipyridyl; Adenine; Base Sequence; Cross-Linking Reagents; Cytosine; DNA; DNA Methylation; Electrophoresis, Polyacrylamide Gel; Genome; Methylation; Nucleic Acid Hybridization; Oligonucleotides; Osmium; Oxidation-Reduction; Polymerase Chain Reaction; Pyrimidines; Sequence Analysis, DNA; Temperature | 2007 |
Preparation and metal ion-binding of 4-N-substituted cytosine pairs in DNA duplexes.
Topics: Base Pairing; Copper; Cytosine; DNA; Ions; Metals, Heavy; Nickel; Nucleic Acid Denaturation; Oligonucleotides; Silver; Spectrometry, Mass, Electrospray Ionization | 2007 |
Oligonucleotide transformation for the study of mutagenic specificities of DNA lesions in yeast.
Topics: Cytosine; DNA Damage; DNA Mutational Analysis; Guanine; Mutagenesis; Oligonucleotides; Saccharomyces cerevisiae; Transformation, Genetic | 2007 |
Oxidation of single-stranded oligonucleotides by carbonate radical anions: generating intrastrand cross-links between guanine and thymine bases separated by cytosines.
Topics: Anions; Carbonates; Chromatography, Liquid; Cross-Linking Reagents; Cytosine; DNA; DNA Damage; Electrons; Free Radicals; Guanine; Nuclear Magnetic Resonance, Biomolecular; Oligonucleotides; Oxidation-Reduction; Tandem Mass Spectrometry; Thymine | 2008 |
Dynamics in the DNA recognition by DAPI: exploration of the various binding modes.
Topics: Adenine; Base Pairing; Base Sequence; Binding Sites; Bisbenzimidazole; Buffers; Cytosine; DNA; Fluorescent Dyes; Guanine; Indoles; Intercalating Agents; Oligonucleotides; Solvents; Spectrometry, Fluorescence; Thymine; Time Factors | 2008 |
2-Aminopurine/cytosine base pair containing oligonucleotides: fluorescence spectroscopy studies on DNA-polyamide binding.
Topics: 2-Aminopurine; Base Pairing; Binding Sites; Cytosine; DNA; Nylons; Oligonucleotides; Spectrometry, Fluorescence | 2008 |
Stabilization by extra-helical thymines of a DNA duplex with Hoogsteen base pairs.
Topics: Base Pairing; Crystallography, X-Ray; Cytosine; DNA; Hydrogen Bonding; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Thymine | 2008 |
Hyperthermophilic Aquifex aeolicus initiates primer synthesis on a limited set of trinucleotides comprised of cytosines and guanines.
Topics: Bacteria; Bacterial Proteins; Base Sequence; Cytosine; DNA Primase; Guanine; Oligonucleotides; Ribonucleotides; RNA; Substrate Specificity; Temperature; Templates, Genetic | 2008 |
A conjoined thienopyrrole oligomer formed by using DNA as a molecular guide.
Topics: Aniline Compounds; Base Sequence; Cytosine; DNA; Horseradish Peroxidase; Hydrogen Peroxide; Nucleic Acid Hybridization; Oligonucleotides; Polymers; Pyrroles; Spectrophotometry, Ultraviolet | 2008 |
Fluorescence and hybridization properties of peptide nucleic acid containing a substituted phenylpyrrolocytosine designed to engage Guanine with an additional H-bond.
Topics: Cytosine; DNA, Complementary; Fluorescent Dyes; Guanine; Hydrogen Bonding; Models, Molecular; Nucleic Acid Hybridization; Oligonucleotides; Peptide Nucleic Acids; Pyrroles; Quantum Theory; RNA | 2008 |
A short C-rich PNA fragment capable to form novel G-quadruplex-PNA complexes.
Topics: Circular Dichroism; Cytosine; G-Quadruplexes; Oligonucleotides; Peptide Nucleic Acids | 2008 |
Errors in the bisulfite conversion of DNA: modulating inappropriate- and failed-conversion frequencies.
Topics: 5-Methylcytosine; Cytosine; DNA; DNA Methylation; DNA, Single-Stranded; Nucleic Acid Conformation; Oligonucleotides; Polymerase Chain Reaction; Sequence Analysis, DNA; Sulfites; Temperature | 2008 |
Incorporation of 5-chlorocytosine into mammalian DNA results in heritable gene silencing and altered cytosine methylation patterns.
Topics: Animals; CHO Cells; Cricetinae; Cricetulus; Cytosine; DNA; DNA Damage; DNA Replication; Gene Silencing; Glycine; Humans; Inflammation; Mammals; Methylation; Neoplasms; Oligonucleotides | 2009 |
Synthesis and reaction of DNA oligomers containing modified cytosines related to bisulfite sequencing.
Topics: Catalysis; Cytosine; DNA; Molecular Structure; Oligonucleotides | 2009 |
The excited-state lifetimes in a G x C DNA duplex are nearly independent of helix conformation and base-pairing motif.
Topics: Absorption; Base Pairing; Crystallography, X-Ray; Cytosine; DNA; DNA Damage; Guanine; Half-Life; Nucleic Acid Conformation; Oligonucleotides; Spectrophotometry, Ultraviolet; Time Factors; Ultraviolet Rays | 2009 |
Nucleic acid base analog FRET-pair facilitating detailed structural measurements in nucleic acid containing systems.
Topics: Cytosine; DNA; Fluorescence Resonance Energy Transfer; Models, Chemical; Models, Theoretical; Nitro Compounds; Nucleic Acid Conformation; Nucleic Acids; Oligonucleotides; Oxazines; Phenothiazines; Photochemistry; Spectrophotometry, Ultraviolet; Temperature | 2009 |
A CA(+) pair adjacent to a sheared GA or AA pair stabilizes size-symmetric RNA internal loops.
Topics: Adenine; Base Pairing; Base Sequence; Cytosine; Guanine; Hydrogen-Ion Concentration; Magnetic Resonance Spectroscopy; Molecular Sequence Data; Nucleic Acid Conformation; Oligonucleotides; RNA; RNA Stability; Thermodynamics | 2009 |
The influence of cytosine methylation on the chemoselectivity of benzo[a]pyrene diol epoxide-oligonucleotide adducts determined using nanoLC/MS/MS.
Topics: 5-Methylcytosine; 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide; Analytic Sample Preparation Methods; Benzo(a)pyrene; Carcinogens; Chromatography, High Pressure Liquid; Codon; Cytosine; DNA; DNA Adducts; DNA Methylation; Genes, p53; Guanine; Humans; Microchemistry; Mutagens; Oligonucleotides; Spectrometry, Mass, Electrospray Ionization; Tandem Mass Spectrometry | 2009 |
Label-free analysis of DNA methylation using optofluidic ring resonators.
Topics: Animals; Cell Proliferation; Cytosine; DNA Methylation; Epigenesis, Genetic; Equipment Design; Humans; Methylation; Mice; Neoplasms; Nucleic Acid Hybridization; Oligonucleotides; Optics and Photonics | 2009 |
Removal of deaminated cytosines and detection of in vivo methylation in ancient DNA.
Topics: Animals; CpG Islands; Cytosine; Deamination; Deoxyribonuclease (Pyrimidine Dimer); DNA Methylation; DNA Repair; Hominidae; Humans; Mammoths; Oligonucleotides; Sequence Analysis, DNA; Uracil-DNA Glycosidase | 2010 |
DNA (6-4) photolyases reduce Dewar isomers for isomerization into (6-4) lesions.
Topics: Cytosine; Deoxyribodipyrimidine Photo-Lyase; DNA Damage; DNA Repair; DNA, Single-Stranded; Isomerism; Oligonucleotides; Pyrimidine Dimers; Thymidine | 2010 |
Examination of the specificity of DNA methylation profiling techniques towards 5-methylcytosine and 5-hydroxymethylcytosine.
Topics: 5-Methylcytosine; Antibodies; Cytosine; DNA; DNA Methylation; DNA-Binding Proteins; Electrophoretic Mobility Shift Assay; Immunoprecipitation; Oligonucleotides; Sequence Analysis, DNA; Sulfites | 2010 |
Silver(I)-mediated cytosine self-pairing is preferred over hoogsteen-type base pairs with the artificial nucleobase 1,3-dideaza-6-nitropurine.
Topics: Base Pairing; Base Sequence; Benzimidazoles; Circular Dichroism; Cytosine; Hydrogen-Ion Concentration; Molecular Sequence Data; Nucleic Acid Denaturation; Nucleic Acid Heteroduplexes; Oligonucleotides; Purines; Silver Nitrate; Titrimetry | 2010 |
Oligonucleotide-selenide conjugate: synthesis and its inducible sequence-specific alkylation of DNA.
Topics: Alkylating Agents; Alkylation; Base Sequence; Cross-Linking Reagents; Cytosine; DNA; Oligonucleotides; Selenium | 2010 |
Recognition of left-handed Z-DNA of short unmodified oligonucleotides under physiological ionic strength conditions.
Topics: Circular Dichroism; Cytosine; DNA, Z-Form; Guanine; Nickel; Nucleic Acid Conformation; Oligonucleotides; Osmolar Concentration | 2010 |
Electronic and molecular structure of M-DNA fragments.
Topics: Adenine; Base Pairing; Cytosine; DNA; Electrons; Guanine; Hydrogen Bonding; Models, Molecular; Nanotechnology; Nickel; Nucleic Acid Conformation; Oligonucleotides; Protons; Quantum Theory; Thermodynamics; Thymine; Zinc | 2011 |
Probing differential Ag+-nucleobase interactions with isothermal titration calorimetry (ITC): Towards patterned DNA metallization.
Topics: Calorimetry; Cytosine; DNA; Metal Nanoparticles; Microscopy, Electron, Transmission; Nanowires; Oligonucleotides; Oxidation-Reduction; Silver; Thermodynamics; Thymine | 2009 |
Sensitive and selective localized surface plasmon resonance light-scattering sensor for Ag+ with unmodified gold nanoparticles.
Topics: Base Pair Mismatch; Cytosine; Gold; Hydrogen-Ion Concentration; Light; Metal Nanoparticles; Oligonucleotides; Scattering, Radiation; Silver; Surface Plasmon Resonance; Temperature; Water | 2010 |
Site-specific photochemical RNA editing.
Topics: Base Sequence; Carbazoles; Cytosine; Nucleosides; Oligonucleotides; Photochemistry; RNA; RNA Editing; Uracil | 2010 |
Enantioselective recognition between polydiacetylene nucleolipid monolayers and complementary oligonucleotides.
Topics: Adsorption; Cytosine; Guanosine; Membranes, Artificial; Molecular Structure; Oligonucleotides; Particle Size; Polyynes; Stereoisomerism; Surface Properties | 2010 |
Observation of water molecules within the bimolecular d(G₃CT₄G₃C)₂G-quadruplex.
Topics: Ammonia; Base Pairing; Cations, Monovalent; Cytosine; G-Quadruplexes; Nuclear Magnetic Resonance, Biomolecular; Oligonucleotides; Thymine; Water | 2011 |
Facile synthesis of hydroxymethylcytosine-containing oligonucleotides and their reactivity upon osmium oxidation.
Topics: 5-Methylcytosine; Crystallography, X-Ray; Cytosine; Models, Molecular; Molecular Structure; Oligonucleotides; Osmium; Oxidation-Reduction; Stereoisomerism; Transition Temperature | 2011 |
Syntheses of 5-formyl- and 5-carboxyl-dC containing DNA oligos as potential oxidation products of 5-hydroxymethylcytosine in DNA.
Topics: 5-Methylcytosine; Cytosine; Deoxycytidine; DNA; Methylation; Molecular Structure; Oligonucleotides; Oxidation-Reduction | 2011 |
2'-O,4'-C-methyleneoxymethylene bridged nucleic acids (2',4'-BNA(COC)).
Topics: 5-Methylcytosine; Adenine; Biological Products; Bridged-Ring Compounds; Chemistry, Pharmaceutical; Cytosine; DNA; Guanine; Nucleosides; Oligonucleotides; Oligonucleotides, Antisense; Organophosphorus Compounds; RNA; Thymine | 2011 |
Fluorescence resonance energy transfer dye-labeled probe for fluorescence-enhanced DNA detection: an effective strategy to greatly improve discrimination ability toward single-base mismatch.
Topics: Base Pair Mismatch; Biosensing Techniques; Cytosine; DNA; DNA Probes; Fluoresceins; Fluorescence Resonance Energy Transfer; Fluorescent Dyes; Nanoparticles; Nucleic Acid Hybridization; Oligonucleotides; Phenylenediamines; Rhodamines | 2011 |
Silver(I) ions and cysteine detection based on photoinduced electron transfer mediated by cytosine-Ag(+)-cytosine base pairs.
Topics: Base Pairing; Base Sequence; Cysteine; Cytosine; Electron Transport; Fluoresceins; Ions; Oligonucleotides; Photochemical Processes; Silver; Spectrometry, Fluorescence | 2011 |
Improved synthesis and mutagenicity of oligonucleotides containing 5-hydroxymethylcytosine, 5-formylcytosine and 5-carboxylcytosine.
Topics: 5-Methylcytosine; Chromatography, High Pressure Liquid; Cytosine; DNA Methylation; Molecular Structure; Mutagens; Oligonucleotides; Organophosphorus Compounds; Spectrometry, Mass, Electrospray Ionization | 2011 |
Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides.
Topics: Binding Sites; Cytosine; DNA; Heterogeneous-Nuclear Ribonucleoproteins; Models, Molecular; Oligonucleotides; Protein Binding; Protein Structure, Tertiary; RNA, Messenger | 2012 |
7-Methylguanine: protonation, formation of linkage isomers with trans-(NH3)2Pt(II), and base pairing properties.
Topics: Base Pairing; Crystallography, X-Ray; Cytosine; Guanine; Hydrogen Bonding; Models, Molecular; Oligonucleotides; Organoplatinum Compounds; Protons; Quantum Theory; Stereoisomerism | 2012 |
Residues of E. coli topoisomerase I conserved for interaction with a specific cytosine base to facilitate DNA cleavage.
Topics: Amino Acid Substitution; Cytosine; DNA Cleavage; DNA Topoisomerases, Type I; Escherichia coli; Escherichia coli Proteins; Oligonucleotides | 2012 |
Detection of silver(I) ions based on the controlled self-assembly of a perylene fluorescence probe.
Topics: Base Sequence; Biosensing Techniques; Cytosine; Fluorescent Dyes; Inverted Repeat Sequences; Oligonucleotides; Perylene; Silver; Solubility; Spectrometry, Fluorescence; Water | 2012 |
Hybridization potential of oligonucleotides comprising 3'-O-methylated altritol nucleosides.
Topics: Adenine; Cytosine; Guanine; Magnetic Resonance Spectroscopy; Nucleic Acid Hybridization; Nucleosides; Oligonucleotides; RNA, Small Interfering; Sequence Analysis, RNA; Solid-Phase Synthesis Techniques; Sugar Alcohols; Thermodynamics; Ultraviolet Rays; Uracil | 2012 |
High-sensitivity detection of silver ions using oligonucleotide-immobilized oscillator.
Topics: Biosensing Techniques; Conductometry; Cytosine; Equipment Design; Equipment Failure Analysis; Oligonucleotides; Oscillometry; Reproducibility of Results; Sensitivity and Specificity; Silver | 2013 |
The interaction of nemorubicin metabolite PNU-159682 with DNA fragments d(CGTACG)(2), d(CGATCG)(2) and d(CGCGCG)(2) shows a strong but reversible binding to G:C base pairs.
Topics: Antibiotics, Antineoplastic; Base Pairing; Cytosine; DNA; Doxorubicin; Guanine; Humans; Magnetic Resonance Spectroscopy; Models, Molecular; Oligonucleotides; Spectrophotometry, Ultraviolet; Thermodynamics; Topoisomerase II Inhibitors | 2012 |
Highly mutagenic exocyclic DNA adducts are substrates for the human nucleotide incision repair pathway.
Topics: Adenine; Biocatalysis; Cell Extracts; Cell-Free System; Cytosine; DNA Adducts; DNA Glycosylases; DNA Repair; DNA-(Apurinic or Apyrimidinic Site) Lyase; HeLa Cells; Humans; Kinetics; Mutagens; Oligonucleotides; Oxidation-Reduction; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Substrate Specificity; Thymine; Time Factors | 2012 |
Base pairing and miscoding properties of 1,N(6)-ethenoadenine- and 3,N(4)-ethenocytosine-containing RNA oligonucleotides.
Topics: Adenine; Base Pairing; Base Sequence; Circular Dichroism; Cytosine; Nucleic Acid Denaturation; Oligonucleotides; Organophosphorus Compounds; RNA | 2013 |
Potentiometric aptasensing based on target-induced conformational switch of a DNA probe using a polymeric membrane silver ion-selective electrode.
Topics: Aptamers, Nucleotide; Biosensing Techniques; Cytosine; DNA; DNA Probes; Ion-Selective Electrodes; Limit of Detection; Oligonucleotides; Potentiometry; Silver | 2013 |
Fluorescent properties of oligonucleotides doubly modified with an indole-fused cytosine analog and 2-aminopurine.
Topics: 2-Aminopurine; Base Sequence; Cytosine; Fluorescent Dyes; Indoles; Molecular Imaging; Molecular Sequence Data; Oligonucleotides; Spectrometry, Fluorescence; Staining and Labeling | 2013 |
Removal of N-alkyl modifications from N(2)-alkylguanine and N(4)-alkylcytosine in DNA by the adaptive response protein AlkB.
Topics: Alkylation; Base Pairing; Chromatography, High Pressure Liquid; Cytosine; DNA Adducts; DNA, Single-Stranded; Escherichia coli; Escherichia coli Proteins; Guanine; Mixed Function Oxygenases; Oligonucleotides; Spectrometry, Mass, Electrospray Ionization | 2013 |
Voltammetric behaviour of free DNA bases, methylcytosine and oligonucleotides at disposable screen printed graphite electrode platforms.
Topics: Cytosine; Disposable Equipment; DNA; Electrochemistry; Electrodes; Graphite; Hydrogen-Ion Concentration; Oligonucleotides; Printing | 2013 |
Mechanism of the hairpin folding transformation of thymine-cytosine-rich oligonucleotides induced by Hg(II) and Ag(I) ions.
Topics: Cytosine; Inverted Repeat Sequences; Mercury; Nucleic Acid Conformation; Oligonucleotides; Silver; Thermodynamics; Thymine | 2013 |
Evaluation of UDP-GlcN derivatives for selective labeling of 5-(hydroxymethyl)cytosine.
Topics: 5-Methylcytosine; Animals; Antibodies; Bacteriophage T4; Cytosine; DNA; Embryonic Stem Cells; Fluorescent Dyes; Glucosamine; Glucosyltransferases; Glycosylation; Mice; Oligonucleotides; Staining and Labeling; Substrate Specificity; Uracil Nucleotides | 2013 |
Comparison of the structural and dynamic effects of 5-methylcytosine and 5-chlorocytosine in a CpG dinucleotide sequence.
Topics: 5-Methylcytosine; Cytosine; Hot Temperature; Hydrogen Bonding; Indicators and Reagents; Magnetic Resonance Spectroscopy; Nitrogen Isotopes; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; X-Ray Diffraction | 2013 |
A new modified cytosine base capable of base pairing with guanine using four hydrogen bonds.
Topics: Base Pairing; Cytosine; Guanine; Hydrogen Bonding; Molecular Dynamics Simulation; Molecular Structure; Oligonucleotides | 2014 |
Real-time study of interactions between cytosine-cytosine pairs in DNA oligonucleotides and silver ions using dual polarization interferometry.
Topics: Base Pairing; Biosensing Techniques; Calibration; Circular Dichroism; Computer Systems; Cysteine; Cytosine; DNA; DNA, Single-Stranded; Drinking Water; Interferometry; Metals; Microscopy, Atomic Force; Oligonucleotides; Silver | 2014 |
Pyrimidine-fused heterocyclic frameworks based on an N4-arylcytosine scaffold: synthesis, characterization, and PNA oligomerization of the fluorescent cytosine analogue 5,6-benzopC.
Topics: Benzimidazoles; Cytosine; Fluorescent Dyes; Heterocyclic Compounds; Nucleic Acid Hybridization; Oligonucleotides; Peptide Nucleic Acids; Pyrimidines | 2014 |
An evaluation of selective deprotection conditions for the synthesis of RNA on a light labile solid support.
Topics: Adenine; Chromatography, Thin Layer; Cytosine; Guanine; Nucleosides; Oligonucleotides; RNA; Uracil | 2014 |
A mutant of uracil DNA glycosylase that distinguishes between cytosine and 5-methylcytosine.
Topics: 5-Methylcytosine; Bacterial Proteins; Base Sequence; Cytosine; DNA; Escherichia coli; Gene Expression; Molecular Sequence Data; Mutation; Oligonucleotides; Recombinant Proteins; Substrate Specificity; Thymine; Uracil; Uracil-DNA Glycosidase | 2014 |
Structural basis for hydroxymethylcytosine recognition by the SRA domain of UHRF2.
Topics: 5-Methylcytosine; Binding Sites; Crystallography, X-Ray; Cytosine; Humans; Hydrogen Bonding; Models, Molecular; Oligonucleotides; Protein Binding; Protein Structure, Secondary; Protein Structure, Tertiary; Ubiquitin-Protein Ligases | 2014 |
Synthesis of oligonucleotides containing N,N-disubstituted 3-deazacytosine nucleobases by post-elongation modification and their triplex-forming ability with double-stranded DNA.
Topics: Cytosine; DNA; Molecular Structure; Oligonucleotides | 2014 |
One-step synthesized immunostimulatory oligonucleotides-functionalized quantum dots for simultaneous enhanced immunogenicity and cell imaging.
Topics: Animals; Cell Line; Cell Survival; Cytosine; Dose-Response Relationship, Drug; Fluorescence; Fluorescent Dyes; Guanine; Immunotherapy; Mice; Molecular Imaging; Oligonucleotides; Phosphates; Quantum Dots; Structure-Activity Relationship | 2015 |
Turn-on sensing for Ag+ based on AIE-active fluorescent probe and cytosine-rich DNA.
Topics: Biosensing Techniques; Cytosine; DNA; Fluorescent Dyes; Limit of Detection; Oligonucleotides; Silver | 2015 |
Differential stabilities and sequence-dependent base pair opening dynamics of Watson-Crick base pairs with 5-hydroxymethylcytosine, 5-formylcytosine, or 5-carboxylcytosine.
Topics: 5-Methylcytosine; Cytosine; DNA; Oligonucleotides; Thymine DNA Glycosylase | 2015 |
5-Hydroxymethylcytosine and 5-formylcytosine containing deoxyoligonucleotides: facile syntheses and melting temperature studies.
Topics: 5-Methylcytosine; Catalysis; Chromatography, High Pressure Liquid; Chromatography, Reverse-Phase; Copper; Cytosine; Oligonucleotides; Oxidation-Reduction; Transition Temperature | 2015 |
Hybridisation potential of 1',3'-Di-O-methylaltropyranoside nucleic acids.
Topics: Adenine; Cytosine; DNA; Guanine; Nucleic Acid Denaturation; Nucleic Acid Hybridization; Nucleic Acids; Oligonucleotides; RNA, Small Interfering; Sugar Alcohols; Thermodynamics; Uracil | 2015 |
Stabilization of the i-motif structure by the intra-strand cross-link formation.
Topics: Amino Acid Motifs; Circular Dichroism; Cytosine; Humans; Hydrogen-Ion Concentration; Nucleic Acid Conformation; Oligonucleotides; Telomere | 2015 |
Intrinsic mutagenic properties of 5-chlorocytosine: A mechanistic connection between chronic inflammation and cancer.
Topics: Biomarkers, Tumor; Carcinogenesis; Chromatography, High Pressure Liquid; Cytosine; DNA Mutational Analysis; Humans; Hypochlorous Acid; Inflammation; Inflammatory Bowel Diseases; Models, Molecular; Mutagenesis; Mutagens; Mutation; Neoplasms; Oligonucleotides; Peroxidase; Sequence Analysis, DNA | 2015 |
Bisulfite-free, base-resolution analysis of 5-formylcytosine at the genome scale.
Topics: 5-Methylcytosine; Animals; Cell Line; CpG Islands; Cytosine; DNA Methylation; DNA Primers; Epigenomics; Gene Expression Regulation; Genome; Mice; Mice, Transgenic; Oligonucleotides; Oxygen; Polymerase Chain Reaction; Sequence Analysis, DNA; Stem Cells; Sulfites | 2015 |
Structural Implications of Homopyrimidine Base Pairs in the Parallel-Stranded d(YGA) Motif.
Topics: Base Pairing; Crystallography, X-Ray; Cytosine; Intercalating Agents; Nucleic Acid Conformation; Nucleotide Motifs; Oligonucleotides; Pyrimidines | 2016 |
Osmium-Based Pyrimidine Contrast Tags for Enhanced Nanopore-Based DNA Base Discrimination.
Topics: 2,2'-Dipyridyl; Cytosine; DNA; Electricity; High-Throughput Nucleotide Sequencing; Nanopores; Oligonucleotides; Osmium; Sequence Analysis, DNA; Staining and Labeling; Thymine | 2015 |
Rules of UGA-N decoding by near-cognate tRNAs and analysis of readthrough on short uORFs in yeast.
Topics: Basic-Leucine Zipper Transcription Factors; Codon, Terminator; Cytosine; Eukaryotic Initiation Factor-3; Oligonucleotides; Open Reading Frames; RNA, Transfer; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins | 2016 |
Studying Z-DNA and B- to Z-DNA transitions using a cytosine analogue FRET-pair.
Topics: Algorithms; Base Pairing; Circular Dichroism; Cytosine; DNA; DNA, Z-Form; Fluorescence Resonance Energy Transfer; Kinetics; Models, Molecular; Models, Theoretical; Nucleic Acid Conformation; Oligonucleotides | 2016 |
High-Energy Long-Lived Mixed Frenkel-Charge-Transfer Excitons: From Double Stranded (AT)n to Natural DNA.
Topics: Adenine; Animals; Cattle; Cytosine; DNA; Energy Transfer; Oligonucleotides; Quantum Theory; Spectrometry, Fluorescence; Thymine; Ultraviolet Rays | 2016 |
5-Mercuricytosine: An Organometallic Janus Nucleobase.
Topics: Base Pairing; Cytosine; Guanine; Mercury; Nucleic Acid Conformation; Nucleic Acid Hybridization; Oligonucleotides; Thermodynamics; Thymine | 2016 |
The free energy of locking a ring: Changing a deoxyribonucleoside to a locked nucleic acid.
Topics: Cytosine; Deoxyribonucleosides; DNA; Molecular Dynamics Simulation; Nucleic Acid Conformation; Oligonucleotides; Ribose; Thermodynamics; Thymidine | 2017 |
Modified Nucleotides as Substrates of Terminal Deoxynucleotidyl Transferase.
Topics: Cytosine; DNA Nucleotidylexotransferase; Genetic Engineering; Mutagenesis; Oligonucleotides; Substrate Specificity; Thiouracil | 2017 |
Reaction of S-geranyl-2-thiouracil modified oligonucleotides with alkyl amines leads to the N2-alkyl isocytosine derivatives.
Topics: Amines; Cytosine; Molecular Structure; Oligonucleotides; Terpenes; Thiouracil | 2017 |
An Extraordinarily Stable DNA Minidumbbell.
Topics: Base Sequence; Cytosine; DNA; DNA Repair; Hydrogen Bonding; Hydrogen-Ion Concentration; Molecular Structure; Nucleic Acid Conformation; Oligonucleotides; Temperature; Thermodynamics | 2017 |
What Hinders Electron Transfer Dissociation (ETD) of DNA Cations?
Topics: Base Sequence; Cations; Cytosine; DNA; Electron Transport; Electrons; Free Radicals; Mass Spectrometry; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Protons | 2017 |
Studying the influence of stem composition in pH-sensitive molecular beacons onto their sensing properties.
Topics: Base Pairing; Cytosine; Fluorescent Dyes; HeLa Cells; Humans; Hydrogen-Ion Concentration; Molecular Probes; Oligonucleotide Probes; Oligonucleotides | 2017 |
Charge evolution during the unfolding of a single DNA i-motif.
Topics: Cytosine; DNA; Nucleic Acid Conformation; Nucleotide Motifs; Oligonucleotides; Protein Denaturation; Protein Folding; Spectrometry, Fluorescence; Telomere | 2018 |
Lateral flow test for visual detection of silver (I) based on cytosine-Ag(I)-cytosine interaction in C-rich oligonucleotides.
Topics: Biosensing Techniques; Cytosine; Drinking Water; Gold; Limit of Detection; Metal Nanoparticles; Oligonucleotides; Rivers; Silver | 2017 |
Triplex Formation by Oligonucleotides Containing Organomercurated Base Moieties.
Topics: Base Pairing; Base Sequence; Circular Dichroism; Cytosine; Mercury; Nucleic Acid Conformation; Nucleic Acid Denaturation; Nucleic Acid Hybridization; Oligonucleotides; Thymine; Uracil | 2018 |
Identification of Essential Sensitive Regions of the Aerolysin Nanopore for Single Oligonucleotide Analysis.
Topics: Bacterial Toxins; Cytosine; Methylation; Molecular Dynamics Simulation; Nanopores; Oligonucleotides; Pore Forming Cytotoxic Proteins; Protein Conformation | 2018 |
Coupling oligonucleotides possessing a poly-cytosine tag with magnetic ionic liquids for sequence-specific DNA analysis.
Topics: Cytosine; DNA; Hydrophobic and Hydrophilic Interactions; Ionic Liquids; Magnetics; Oligonucleotides; Real-Time Polymerase Chain Reaction; Sequence Analysis, DNA; Viscosity | 2018 |
Selective Labeling Aldehydes in DNA.
Topics: Aldehydes; Animals; Cattle; Chromatography, High Pressure Liquid; Cytosine; DNA; Hydroxylamine; Naphthalimides; Native Polyacrylamide Gel Electrophoresis; Oligonucleotides | 2018 |
Atomic Structure of a Fluorescent Ag
Topics: Adenine; Base Pairing; Crystallization; Crystallography, X-Ray; Cytosine; Fluorescent Dyes; Molecular Structure; Nitrogen; Oligonucleotides; Silver | 2019 |
Anomeric 5-Aza-7-deaza-2'-deoxyguanosines in Silver-Ion-Mediated Homo and Hybrid Base Pairs: Impact of Mismatch Structure, Helical Environment, and Nucleobase Substituents on DNA Stability.
Topics: Base Pair Mismatch; Base Pairing; Cations, Monovalent; Cytosine; Deoxycytidine; Deoxyguanosine; DNA; Glycosylation; Guanine; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Silver; Structure-Activity Relationship; Thermodynamics | 2019 |
[Hachimoji DNA extends coding possibilities].
Topics: Adenine; Cytosine; DNA; Guanine; Hydrogen Bonding; Molecular Structure; Nucleotides; Oligonucleotides; Synthetic Biology; Thymine | 2019 |
Direct evidence for (G)O6···H
Topics: Adenosine; Base Pairing; Cytosine; Density Functional Theory; DNA; Epigenesis, Genetic; Guanine; Hydrogen Bonding; Hydrogen-Ion Concentration; Magnetic Resonance Spectroscopy; Nitrogen; Oligonucleotides; Thymine | 2019 |
Chasing Particularities of Guanine- and Cytosine-Rich DNA Strands.
Topics: Base Sequence; Cytosine; DNA; G-Quadruplexes; Guanine; Imines; Nucleotide Motifs; Oligonucleotides; Proton Magnetic Resonance Spectroscopy | 2020 |
Transcription of DNA duplex containing deoxypseudouridine and deoxypseudoisocytidine, and inhibition of transcription by triplex forming oligonucleotide that recognizes the modified duplex.
Topics: Aminopyridines; Base Sequence; Cytosine; DNA; Hydrogen Bonding; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Phase Transition; Promoter Regions, Genetic; Transition Temperature | 2020 |
Carbon Nanotubes and Short Cytosine-Rich Telomeric DNA Oligomeres as Platforms for Controlled Release of Doxorubicin-A Molecular Dynamics Study.
Topics: Cytosine; DNA; Doxorubicin; Drug Liberation; Molecular Dynamics Simulation; Nanotubes, Carbon; Nucleotide Motifs; Oligonucleotides; Telomere | 2020 |
Acid-facilitated G-quadruplex/hemin DNAzymes: accompanied by the assembly of quadruplex supramolecules.
Topics: Acids; Circular Dichroism; Cytosine; DNA, Catalytic; Fluorescent Dyes; G-Quadruplexes; Hemin; Hydrogen-Ion Concentration; Oligonucleotides | 2020 |
Hairpin-Bisulfite PCR.
Topics: Cytosine; DNA; DNA Methylation; DNA, Complementary; Humans; Inverted Repeat Sequences; Nucleic Acid Conformation; Oligonucleotides; Polymerase Chain Reaction; Sequence Analysis, DNA; Sulfites | 2021 |
Consecutive Silver(I) Ion Incorporation into Oligonucleotides containing Cytosine-Cytosine Mispairs.
Topics: Circular Dichroism; Cytosine; Ions; Oligonucleotides; Silver | 2021 |
Bifunctional single-labelled oligonucleotide probe for detection of trace Ag(I) and Pb(II) based on cytosine-Ag(I)-cytosine mismatches and G-quadruplex.
Topics: Biosensing Techniques; Cytosine; G-Quadruplexes; Lead; Oligonucleotide Probes; Oligonucleotides; Silver | 2021 |
Silver(I)-mediated base pairing in DNA involving the artificial nucleobase 7,8-dihydro-8-oxo-1,N
Topics: Adenine; Base Pairing; Calorimetry; Circular Dichroism; Cytosine; DNA; Hydrogen Bonding; Ions; Molecular Structure; Nucleic Acids; Oligonucleotides; Oxygen; Silver; Spectrometry, Fluorescence; Transition Temperature | 2021 |
Stabilization of VEGF i-motif structure by CpG methylation.
Topics: Amino Acid Motifs; Buffers; Circular Dichroism; CpG Islands; Cytosine; DNA Methylation; G-Quadruplexes; Humans; Hydrogen-Ion Concentration; Intercalating Agents; Nucleic Acid Conformation; Oligonucleotides; Protein Structure, Secondary; Temperature; Vascular Endothelial Growth Factor A | 2022 |
Measurement of deaminated cytosine adducts in DNA using a novel hybrid thymine DNA glycosylase.
Topics: Cytosine; DNA; DNA Repair; Humans; Oligonucleotides; Substrate Specificity; Tandem Mass Spectrometry; Thymine; Thymine DNA Glycosylase; Uracil | 2022 |
Building machine-learning-based models for retention time and resolution predictions in ion pair chromatography of oligonucleotides.
Topics: Chromatography; Chromatography, High Pressure Liquid; Cytosine; Guanine; Machine Learning; Oligonucleotides | 2022 |
Cytosine-rich oligonucleotides incorporating a non-nucleotide loop: A further step towards the obtainment of physiologically stable i-motif DNA.
Topics: Acrylamides; Circular Dichroism; Cytosine; DNA; Hydrogen-Ion Concentration; Nucleic Acid Conformation; Oligonucleotides | 2022 |
Formation Mechanism of Inter-Crosslink in DNA by Nitrogen Oxides Pollutants through A Diazonium Intermediate.
Topics: Cytosine; DNA; DNA Damage; Environmental Pollutants; Guanine; Guanine Nucleotides; Nitrogen Oxides; Oligonucleotides | 2022 |
Design, Synthesis, and Evaluation of a Cross-Linked Oligonucleotide as the First Nanomolar Inhibitor of APOBEC3A.
Topics: Cytidine; Cytidine Deaminase; Cytosine; DNA, Single-Stranded; Humans; Oligonucleotides | 2022 |
Synthesis and Properties of Nucleobase-Sugar Dual Modified Nucleic Acids: 2
Topics: Chemical and Drug Induced Liver Injury; Cytosine; Humans; Nucleic Acids; Oligonucleotides; Oligonucleotides, Antisense; RNA; Sugar Acids; Sugars | 2023 |
Modulation of the tetrameric I-motif folding of C-rich Tetrahymena telomeric sequences by hexitol nucleic acid (HNA) modifications.
Topics: Cytosine; DNA; Nucleic Acid Conformation; Nucleic Acids; Oligonucleotides; Ribose; Tetrahymena | 2023 |