cytosine and 5-hydroxymethyluracil

cytosine has been researched along with 5-hydroxymethyluracil in 26 studies

Research

Studies (26)

TimeframeStudies, this research(%)All Research%
pre-19905 (19.23)18.7374
1990's6 (23.08)18.2507
2000's2 (7.69)29.6817
2010's10 (38.46)24.3611
2020's3 (11.54)2.80

Authors

AuthorsStudies
Hayatsu, H; Shiragami, M1
Rae, PM; Steele, RE1
Cannon-Carlson, SV; Gokhale, H; Teebor, GW1
Daney de Marcillac, G; Herzog, M; Soyer, MO1
Warren, RA1
Castro, GD; Castro, JA; Stamato, CJ1
Castro, GD; Castro, JA; Díaz Gómez, MI1
Aruoma, OI; England, TG; Halliwell, B; Jenner, A2
Dizdaroglu, M1
Dizdaroglu, M; Sentürker, S1
Burdzy, A; Lin, SS; Liu, P; Rogstad, DK; Sowers, LC1
Haushalter, K; Pearl, LH; Verdine, GL; Waters, TR; Wibley, JE1
Chang, Y; Cheng, X; Hashimoto, H; Howerton, SB; Liu, Y; Upadhyay, AK; Vertino, PM; Zhang, X1
Couvé, S; Grin, I; Henriot, V; Ishchenko, AA; Moréra, S; Saparbaev, M; Vigouroux, A1
Bhagwat, AS; Cheng, X; Hashimoto, H; Hong, S; Zhang, X1
Brandmayr, C; Carell, T; Eisen, D; Hackner, B; Kashiwazaki, G; Kosmatchev, O; Kotljarova, O; Laube, SK; Leonhardt, H; Michalakis, S; Müller, M; Müller, U; Pfaffeneder, T; Raddaoui, N; Schär, P; Schiesser, S; Schuermann, D; Spada, F; Spruijt, CG; Steigenberger, B; Steinbacher, J; Truss, M; Vermeulen, M; Wagner, M1
Foksinski, M; Gackowski, D; Guz, J; Olinski, R; Rozalski, R1
Ganguly, B; Jana, K1
Gackowski, D; Modrzejewska, M; Olinski, R; Starczak, M; Zarakowska, E1
Foksinski, M; Gackowski, D; Gawronski, M; Modrzejewska, M; Olinski, R; Rzeszowska-Wolny, J; Skonieczna, M; Starczak, M; Zarakowska, E1
Boháčová, S; Hocek, M; Janoušková, M; Krásný, L; Nici, F; Šanderová, H; Vaníková, Z; Vítovská, D1
Bednárová, K; Dvoráková, Z; Kejnovská, I; Renciuk, D; Sagi, J; Školáková, P; Vorlícková, M1
Abakir, A; Gackowski, D; Gawronski, M; Kerr, C; Maciejewski, JP; Olinski, R; Radivoyevitch, T; Ruzov, A; Starczak, M; Zarakowska, E1
Abakir, A; Ruzov, A1
Gackowska, L; Gackowski, D; Labejszo, A1

Reviews

2 review(s) available for cytosine and 5-hydroxymethyluracil

ArticleYear
Modified bases in bacteriophage DNAs.
    Annual review of microbiology, 1980, Volume: 34

    Topics: 2-Aminopurine; 5-Methylcytosine; Adenine; Bacteriophages; Base Composition; Chemical Phenomena; Chemistry; Chemistry, Physical; Cytosine; Deoxyribonucleases; DNA Replication; DNA, Viral; Nucleic Acid Conformation; Pentoxyl; Substrate Specificity; Templates, Genetic; Thymine; Transcription, Genetic; Uracil

1980
Facts about the artifacts in the measurement of oxidative DNA base damage by gas chromatography-mass spectrometry.
    Free radical research, 1998, Volume: 29, Issue:6

    Topics: Adenine; Animals; Artifacts; Base Pairing; Cattle; Cytosine; DNA; DNA Damage; DNA Repair; Gas Chromatography-Mass Spectrometry; Guanine; Humans; Oxidation-Reduction; Oxidative Stress; Pentoxyl; Pyrimidines; Temperature; Thymus Gland

1998

Other Studies

24 other study(ies) available for cytosine and 5-hydroxymethyluracil

ArticleYear
Reaction of bisulfite with the 5-hydroxymethyl group in pyrimidines and in phage DNAs.
    Biochemistry, 1979, Feb-20, Volume: 18, Issue:4

    Topics: 5-Methylcytosine; Chemical Phenomena; Chemistry; Coliphages; Cytosine; DNA, Viral; Pentoxyl; Pyrimidines; Spectrophotometry, Ultraviolet; Sulfites; Uracil

1979
Modified bases in the DNAs of unicellular eukaryotes: an examination of distributions and possible roles, with emphasis on hydroxymethyluracil in dinoflagellates.
    Bio Systems, 1978, Volume: 10, Issue:1-2

    Topics: Adenine; Animals; Cells; Cytosine; Dinoflagellida; DNA; Eukaryota; Eukaryotic Cells; Pentoxyl; Uracil

1978
Purification and characterization of 5-hydroxymethyluracil-DNA glycosylase from calf thymus. Its possible role in the maintenance of methylated cytosine residues.
    The Journal of biological chemistry, 1989, Aug-05, Volume: 264, Issue:22

    Topics: Animals; Cattle; Cytosine; Deoxyribonuclease IV (Phage T4-Induced); DNA Glycosylases; DNA-(Apurinic or Apyrimidinic Site) Lyase; Endodeoxyribonucleases; Hydrogen-Ion Concentration; Kinetics; Methylation; Molecular Weight; N-Glycosyl Hydrolases; Pentoxyl; Rats; Substrate Specificity; Thymus Gland; Uracil; Uracil-DNA Glycosidase

1989
A high level of thymine replacement by 5-hydroxymethyluracil in nuclear DNA of the primitive dinoflagellate Prorocentrum micans E.
    European journal of cell biology, 1982, Volume: 27, Issue:2

    Topics: Animals; Base Composition; Centrifugation, Density Gradient; Cytosine; Dinoflagellida; DNA; Guanine; Nucleic Acid Denaturation; Pentoxyl; Thymine; Uracil

1982
5-methylcytosine attack by free radicals arising from bromotrichloromethane in a model system: structures of reaction products.
    Free radical biology & medicine, 1994, Volume: 17, Issue:5

    Topics: 5-Methylcytosine; Aerobiosis; Anaerobiosis; Bromotrichloromethane; Cytosine; DNA; Free Radicals; Gas Chromatography-Mass Spectrometry; Models, Chemical; Pentoxyl; Thymine

1994
DNA bases attack by reactive metabolites produced during carbon tetrachloride biotransformation and promotion of liver microsomal lipid peroxidation.
    Research communications in molecular pathology and pharmacology, 1997, Volume: 95, Issue:3

    Topics: Animals; Biotransformation; Carbon Tetrachloride; Cytosine; DNA Adducts; DNA Damage; Guanine; Lipid Peroxidation; Male; Microsomes, Liver; Pentoxyl; Pyrimidines; Rats; Rats, Sprague-Dawley; Thiobarbituric Acid Reactive Substances; Thymine

1997
Measurement of oxidative DNA damage by gas chromatography-mass spectrometry: ethanethiol prevents artifactual generation of oxidized DNA bases.
    The Biochemical journal, 1998, Apr-15, Volume: 331 ( Pt 2)

    Topics: Adenine; Animals; Cattle; Cytosine; DNA; DNA Damage; Gas Chromatography-Mass Spectrometry; Guanine; Guanine Deaminase; Oxidation-Reduction; Pentoxyl; Sulfhydryl Compounds; Temperature

1998
Determination of oxidative DNA base damage by gas chromatography-mass spectrometry. Effect of derivatization conditions on artifactual formation of certain base oxidation products.
    Free radical research, 1998, Volume: 29, Issue:4

    Topics: Adenine; Animals; Artifacts; Cytosine; DNA; DNA Damage; Gas Chromatography-Mass Spectrometry; Guanine; Hydantoins; Hydrolysis; Nitrogen; Oxidation-Reduction; Pentoxyl; Purines; Pyrimidines; Temperature; Time Factors

1998
The effect of experimental conditions on the levels of oxidatively modified bases in DNA as measured by gas chromatography-mass spectrometry: how many modified bases are involved? Prepurification or not?
    Free radical biology & medicine, 1999, Volume: 27, Issue:3-4

    Topics: Adenine; Animals; Artifacts; Cattle; Cytosine; DNA; Gas Chromatography-Mass Spectrometry; Guanine; Hydrolysis; Nucleotides; Oxidation-Reduction; Pentoxyl; Trifluoroacetic Acid; Uracil

1999
Endogenous DNA lesions can inhibit the binding of the AP-1 (c-Jun) transcription factor.
    Biochemistry, 2002, Jun-25, Volume: 41, Issue:25

    Topics: Adenine; Base Pair Mismatch; Binding, Competitive; Cytosine; DNA Damage; DNA Glycosylases; DNA-Binding Proteins; Humans; N-Glycosyl Hydrolases; Nucleic Acid Heteroduplexes; Oligonucleotides; Pentoxyl; Protein Binding; Proto-Oncogene Proteins c-jun; Thymine; Transcription Factor AP-1; Uracil; Uracil-DNA Glycosidase

2002
Structure and specificity of the vertebrate anti-mutator uracil-DNA glycosylase SMUG1.
    Molecular cell, 2003, Volume: 11, Issue:6

    Topics: Amino Acid Sequence; Animals; Base Pair Mismatch; Base Pairing; Base Sequence; Cytosine; DNA Damage; DNA Glycosylases; DNA Repair; Humans; Mice; Mice, Knockout; Models, Molecular; Molecular Sequence Data; Molecular Structure; Mutation; N-Glycosyl Hydrolases; Pentoxyl; Protein Conformation; Sequence Homology, Amino Acid; Substrate Specificity; Uracil-DNA Glycosidase; Xenopus laevis; Xenopus Proteins

2003
Recognition and potential mechanisms for replication and erasure of cytosine hydroxymethylation.
    Nucleic acids research, 2012, Volume: 40, Issue:11

    Topics: 5-Methylcytosine; Cytosine; DNA (Cytosine-5-)-Methyltransferase 1; DNA (Cytosine-5-)-Methyltransferases; DNA Replication; DNA-Binding Proteins; Humans; Pentoxyl; Thymine DNA Glycosylase

2012
Biochemical and structural characterization of the glycosylase domain of MBD4 bound to thymine and 5-hydroxymethyuracil-containing DNA.
    Nucleic acids research, 2012, Volume: 40, Issue:19

    Topics: 5-Methylcytosine; Bacteria; Catalytic Domain; Cytosine; DNA; Endodeoxyribonucleases; Humans; Models, Molecular; Pentoxyl; Protein Structure, Tertiary; Substrate Specificity; Thymine; Thymine DNA Glycosylase

2012
Excision of 5-hydroxymethyluracil and 5-carboxylcytosine by the thymine DNA glycosylase domain: its structural basis and implications for active DNA demethylation.
    Nucleic acids research, 2012, Nov-01, Volume: 40, Issue:20

    Topics: Biocatalysis; Catalytic Domain; Cytosine; DNA; Humans; Models, Molecular; Pentoxyl; Thymine DNA Glycosylase

2012
Tet oxidizes thymine to 5-hydroxymethyluracil in mouse embryonic stem cell DNA.
    Nature chemical biology, 2014, Volume: 10, Issue:7

    Topics: 5-Methylcytosine; Animals; Base Sequence; Carbon Isotopes; Chromatin Assembly and Disassembly; Chromatography, Liquid; Cytosine; Dioxygenases; DNA; DNA-Binding Proteins; Embryonic Stem Cells; Gene Expression; Mice; Molecular Sequence Data; Oxidation-Reduction; Pentoxyl; Protein Binding; Proto-Oncogene Proteins; Spectrometry, Mass, Electrospray Ionization; Thymine; Transcription Factors

2014
Comparison of the absolute level of epigenetic marks 5-methylcytosine, 5-hydroxymethylcytosine, and 5-hydroxymethyluracil between human leukocytes and sperm.
    Biology of reproduction, 2014, Volume: 91, Issue:3

    Topics: 5-Methylcytosine; Adult; Biomarkers; Chromatography, High Pressure Liquid; Cytosine; Deoxycytidine; DNA; DNA Methylation; Epigenesis, Genetic; Humans; Leukocytes; Male; Pentoxyl; Poland; Spectrometry, Mass, Electrospray Ionization; Spermatozoa; Tandem Mass Spectrometry; Thymidine; Up-Regulation

2014
In silico studies to explore the mutagenic ability of 5-halo/oxy/li-oxy-uracil bases with guanine of DNA base pairs.
    The journal of physical chemistry. A, 2014, Oct-16, Volume: 118, Issue:41

    Topics: Base Pairing; Computer Simulation; Cytosine; DNA; Guanine; Halogens; Hydrogen Bonding; Models, Genetic; Mutagenesis; Pentoxyl; Static Electricity; Uracil

2014
Tissue-Specific Differences in DNA Modifications (5-Hydroxymethylcytosine, 5-Formylcytosine, 5-Carboxylcytosine and 5-Hydroxymethyluracil) and Their Interrelationships.
    PloS one, 2015, Volume: 10, Issue:12

    Topics: 5-Methylcytosine; Animals; Brain Chemistry; Chromatography, High Pressure Liquid; Cytosine; Dioxygenases; DNA; DNA Methylation; Epigenesis, Genetic; Gene Expression; Kidney; Liver; Lung; Male; Myocardium; Organ Specificity; Pentoxyl; Rats; Rats, Wistar; Swine; Tandem Mass Spectrometry; Thymus Gland

2015
Vitamin C enhances substantially formation of 5-hydroxymethyluracil in cellular DNA.
    Free radical biology & medicine, 2016, Volume: 101

    Topics: 5-Methylcytosine; Ascorbic Acid; Cytosine; DNA; DNA Methylation; HCT116 Cells; Humans; Mixed Function Oxygenases; Oxidation-Reduction; Pentoxyl; Proto-Oncogene Proteins; Spectrometry, Mass, Electrospray Ionization; Thymine

2016
5-(Hydroxymethyl)uracil and -cytosine as potential epigenetic marks enhancing or inhibiting transcription with bacterial RNA polymerase.
    Chemical communications (Cambridge, England), 2017, Dec-12, Volume: 53, Issue:99

    Topics: Cytosine; DNA-Directed RNA Polymerases; Epigenesis, Genetic; Escherichia coli; Pentoxyl; Transcription, Genetic

2017
i-Motif of cytosine-rich human telomere DNA fragments containing natural base lesions.
    Nucleic acids research, 2018, 02-28, Volume: 46, Issue:4

    Topics: Adenine; Cytosine; DNA; DNA Damage; Humans; Pentoxyl; Telomere; Uracil

2018
5-formylcytosine and 5-hydroxymethyluracil as surrogate markers of TET2 and SF3B1 mutations in myelodysplastic syndrome, respectively.
    Haematologica, 2020, Volume: 105, Issue:5

    Topics: Biomarkers; Cytosine; Dioxygenases; DNA-Binding Proteins; Humans; Mutation; Myelodysplastic Syndromes; Pentoxyl; Phosphoproteins; Proto-Oncogene Proteins; RNA Splicing Factors

2020
Detection of Low-Abundance DNA Modifications Using Signal Amplification-Based Immunocytochemistry.
    Methods in molecular biology (Clifton, N.J.), 2021, Volume: 2198

    Topics: 5-Methylcytosine; Animals; Antibodies; Cell Nucleus; Cytosine; DNA; DNA Methylation; Epigenesis, Genetic; Humans; Immunohistochemistry; Pentoxyl; Peroxidase

2021
Analysis of 5-Hydroxymethyluracil Levels Using Flow Cytometry.
    Methods in molecular biology (Clifton, N.J.), 2021, Volume: 2198

    Topics: 5-Methylcytosine; Chromatography, Liquid; Cytosine; DNA; DNA Methylation; Epigenesis, Genetic; Flow Cytometry; Humans; Oxidation-Reduction; Pentoxyl; Single-Cell Analysis; Tandem Mass Spectrometry; Thymine

2021