Page last updated: 2024-08-17

cytidine and anticodon

cytidine has been researched along with anticodon in 35 studies

Research

Studies (35)

Timeframe	Studies, this research(%)	All Research%
pre-1990	8 (22.86)	18.7374
1990's	7 (20.00)	18.2507
2000's	6 (17.14)	29.6817
2010's	12 (34.29)	24.3611
2020's	2 (5.71)	2.80

Authors

Authors	Studies
Schulman, LH; Stern, L	2
Chheda, GB; De, NC; Ginell, SL; Parthasarathy, R	1
Ishikura, H; Yamada, Y	1
Agris, PF; Dao, V; Guenther, RH	1
Baumann, U; Fischer, W; Sprinzl, M	1
Ciesiolka, J; Klein, J; Nurse, K; Ofengand, J	1
Bond, PJ; Hingerty, B; Langridge, R; Rottman, F	1
Clore, GM; Graeser, E; Gronenborn, AM; McLaughlin, LW; Piper, EA; van Boom, JH	1
Crain, PF; Hashizume, T; Kawai, G; McCloskey, JA; Moriya, J; Nishikawa, K; Pomerantz, SC; Ueda, T; Wakita, K; Yokogawa, T	1
Bochkariov, D; Brimacombe, R; Döring, T; Mitchell, P; Osswald, M	1
Agabian, N; McNally, KP; Schneider, A	1
Agris, PF; Chen, Y; Everett, K; Guenther, R; Sierzputowska-Gracz, H	1
Tomita, K; Ueda, T; Watanabe, K	1
Akama, K; Small, I; Sugiura, M; Yukawa, Y	1
Agris, PF; Mucha, P; Rekowski, P; Szyk, A; Weiss, PA	1
Björk, GR; Grosjean, H	1
Farhi, A; Hariri, A; Kashgarian, M; Lifton, RP; Nelson-Williams, C; Petersen, KF; Raja, KM; Scheinman, SJ; Shulman, GI; Toka, HR; Wilson, FH; Zhao, H	1
Ikeuchi, Y; Kitahara, K; Suzuki, T	1
Agris, PF; Cantara, WA; Deiters, A; Delaney, MO; Graham, WD; Gustilo, EM; Kaiser, R; Lusic, H; Moye, VA; Vendeix, FA	1
Benkowski, LA; Spremulli, LL; Takemoto, C; Ueda, T; Watanabe, K; Yokogawa, T	1
Blum, P; Castleberry, CM; Köhrer, C; Krivos, K; Limbach, PA; Mandal, D; RajBhandary, UL; Russell, SP; Söll, D; Su, D	1
Ikeuchi, Y; Kimura, S; Nakamura, D; Numata, T; Ogata, T; Suzuki, T; Wada, T; Yokogawa, T	1
Agris, PF; Bilbille, Y; Deiters, A; Delaney, MO; Gustilo, EM; Harris, KA; Jones, CN; Kaiser, RJ; Lusic, H; Spremulli, LL	1
D'Silva, S; Haider, SJ; Phizicky, EM	1
Inanaga, H; Kimura, S; Numata, T; Osawa, T; Suzuki, T; Terasaka, N	1
Miyauchi, K; Ohira, T; Suzuki, T; Watanabe, K; Yamagishi, A; Yokobori, SI	1
Kamble, AD; Kumbhar, BV; Sonawane, KD	1
Numata, T; Suzuki, T	1
D'Silva, S; Han, L; Marcus, E; Phizicky, EM	1
Hirata, S; Kawarada, L; Miyauchi, K; Ohira, T; Suzuki, T	1
Erlacher, MD; Faserl, K; Fuchs, E; Gasser, C; Höbartner, C; Hoernes, TP; Hüttenhofer, A; Joseph, S; Juen, MA; Kremser, J; Kreutz, C; Lindner, H; Micura, R; Shi, X; Siewert, A; Westhof, E	1
Dominissini, D; Rechavi, G	1
Huang, MH; Li, QR; Li, ZH; Mao, XL; Wang, JT; Wang, XJ; Xu, H; Zhou, JB; Zhou, XL	1
Dedon, PC; Kimura, S; Kranzusch, PJ; McCarty, KL; Srisuknimit, V; Waldor, MK	1

Reviews

2 review(s) available for cytidine and anticodon

Article	Year
Enzymatic conversion of cytidine to lysidine in anticodon of bacterial isoleucyl-tRNA--an alternative way of RNA editing. Trends in biochemical sciences, 2004, Volume: 29, Issue:4 Topics: Amino Acyl-tRNA Synthetases; Anticodon; Base Pairing; Cytidine; Escherichia coli Proteins; Isoleucine-tRNA Ligase; Lysine; Methionine-tRNA Ligase; Models, Chemical; Molecular Structure; Pyrimidine Nucleosides; RNA Editing; RNA, Transfer, Ile	2004
Convergent evolution of AUA decoding in bacteria and archaea. RNA biology, 2014, Volume: 11, Issue:12 Topics: Anticodon; Archaea; Bacteria; Biological Evolution; Codon; Cytidine; Genetic Code; Isoleucine; Lysine; Methionine; Models, Molecular; Phylogeny; Protein Biosynthesis; Pyrimidine Nucleosides; Ribosomes; RNA, Transfer	2014

Article

Year

Enzymatic conversion of cytidine to lysidine in anticodon of bacterial isoleucyl-tRNA--an alternative way of RNA editing.

Trends in biochemical sciences, 2004, Volume: 29, Issue:4

Topics: Amino Acyl-tRNA Synthetases; Anticodon; Base Pairing; Cytidine; Escherichia coli Proteins; Isoleucine-tRNA Ligase; Lysine; Methionine-tRNA Ligase; Models, Chemical; Molecular Structure; Pyrimidine Nucleosides; RNA Editing; RNA, Transfer, Ile

2004

Convergent evolution of AUA decoding in bacteria and archaea.

RNA biology, 2014, Volume: 11, Issue:12

Topics: Anticodon; Archaea; Bacteria; Biological Evolution; Codon; Cytidine; Genetic Code; Isoleucine; Lysine; Methionine; Models, Molecular; Phylogeny; Protein Biosynthesis; Pyrimidine Nucleosides; Ribosomes; RNA, Transfer

2014

Other Studies

33 other study(ies) available for cytidine and anticodon

Article	Year
Role of anticodon bases in aminoacylation of Escherichia coli methionine transfer RNAs. The Journal of biological chemistry, 1977, Sep-25, Volume: 252, Issue:18 Topics: Anticodon; Base Sequence; Cytidine; Escherichia coli; Methionine-tRNA Ligase; N-Formylmethionine; RNA, Transfer; Transfer RNA Aminoacylation; Uridine	1977
The role of the minor base N4-acetylcytidine in the function of the Escherichia coli noninitiator methionine transfer RNA. The Journal of biological chemistry, 1978, Sep-10, Volume: 253, Issue:17 Topics: Anticodon; Cytidine; Escherichia coli; Kinetics; Methionine; Peptide Biosynthesis; Protein Biosynthesis; Puromycin; Ribosomes; RNA, Transfer	1978
Conformation of N4-acetylcytidine, a modified nucleoside of tRNA, and stereochemistry of codon-anticodon interaction. Biochemical and biophysical research communications, 1978, Jul-28, Volume: 83, Issue:2 Topics: Anticodon; Codon; Cytidine; Methionine; Models, Molecular; Molecular Conformation; Nucleic Acid Conformation; RNA, Messenger; RNA, Transfer; X-Ray Diffraction	1978
Identification of a modified nucleoside in Escherichia coli tRNA1Ser as 2'-O-methylcytidine. Biochimica et biophysica acta, 1975, Sep-01, Volume: 402, Issue:3 Topics: Anticodon; Cytidine; Escherichia coli; RNA, Bacterial; RNA, Transfer; Serine	1975
The role of 5-methylcytidine in the anticodon arm of yeast tRNA(Phe): site-specific Mg2+ binding and coupled conformational transition in DNA analogs. Biochemistry, 1992, Nov-17, Volume: 31, Issue:45 Topics: Anticodon; Base Sequence; Cations, Divalent; Circular Dichroism; Cytidine; DNA; Hot Temperature; Magnesium; Magnetic Resonance Spectroscopy; Molecular Sequence Data; Nucleic Acid Conformation; Nucleic Acid Denaturation; RNA, Transfer, Phe; Saccharomyces cerevisiae; Spectrophotometry, Ultraviolet; Substrate Specificity	1992
Analysis of modification-dependent structural alterations in the anticodon loop of Escherichia coli tRNAArg and their effects on the translation of MS2 RNA. European journal of biochemistry, 1985, Nov-04, Volume: 152, Issue:3 Topics: Anticodon; Coliphages; Cytidine; Endonucleases; Escherichia coli; Nucleic Acid Conformation; Protein Biosynthesis; RNA, Transfer; RNA, Transfer, Amino Acyl; RNA, Viral; Single-Strand Specific DNA and RNA Endonucleases	1985
Conservation of RNA sequence and cross-linking ability in ribosomes from a higher eukaryote: photochemical cross-linking of the anticodon of P site bound tRNA to the penultimate cytidine of the UACACACG sequence in Artemia salina 18S rRNA. Biochemistry, 1985, Jun-18, Volume: 24, Issue:13 Topics: Anticodon; Artemia; Base Sequence; Chemical Phenomena; Chemistry; Cytidine; Escherichia coli; Kinetics; Photolysis; Ribosomes; RNA, Ribosomal; RNA, Transfer; Ultraviolet Rays	1985
Conformation of 2'-0-methyl cytidine, a modified furanose component of ribonucleic acids. Biochemical and biophysical research communications, 1974, Dec-11, Volume: 61, Issue:3 Topics: Adenosine; Anticodon; Cytidine; Fourier Analysis; Models, Molecular; Molecular Conformation; Nucleic Acid Conformation; RNA, Messenger; RNA, Ribosomal; RNA, Transfer; X-Ray Diffraction	1974
The solution structure of a RNA pentadecamer comprising the anticodon loop and stem of yeast tRNAPhe. A 500 MHz 1H-n.m.r. study. The Biochemical journal, 1984, Aug-01, Volume: 221, Issue:3 Topics: Anticodon; Cytidine; Kinetics; Macromolecular Substances; Magnetic Resonance Spectroscopy; Models, Molecular; Nucleic Acid Conformation; Oligoribonucleotides; Protons; Ribonucleotides; RNA, Transfer; RNA, Transfer, Amino Acyl; Solutions; Temperature	1984
A novel modified nucleoside found at the first position of the anticodon of methionine tRNA from bovine liver mitochondria. Biochemistry, 1994, Mar-01, Volume: 33, Issue:8 Topics: Animals; Anticodon; Base Sequence; Cattle; Chromatography, High Pressure Liquid; Chromatography, Thin Layer; Cytidine; Magnetic Resonance Spectroscopy; Mass Spectrometry; Mitochondria, Liver; Molecular Sequence Data; Nucleic Acid Conformation; Nucleosides; RNA; RNA, Mitochondrial; RNA, Transfer, Met	1994
The decoding region of 16S RNA; a cross-linking study of the ribosomal A, P and E sites using tRNA derivatized at position 32 in the anticodon loop. The EMBO journal, 1994, Jun-01, Volume: 13, Issue:11 Topics: Anticodon; Azirines; Base Sequence; Binding Sites; Cross-Linking Reagents; Cytidine; Escherichia coli; Models, Genetic; Molecular Sequence Data; Nucleic Acid Conformation; Peptide Chain Elongation, Translational; Ribonuclease H; Ribosomes; RNA, Bacterial; RNA, Messenger; RNA, Ribosomal, 16S; RNA, Transfer, Arg; Transfer RNA Aminoacylation; Ultraviolet Rays	1994
Nuclear-encoded mitochondrial tRNAs of Trypanosoma brucei have a modified cytidine in the anticodon loop. Nucleic acids research, 1994, Sep-11, Volume: 22, Issue:18 Topics: Animals; Anticodon; Base Sequence; Cytidine; Cytosol; Mitochondria; Molecular Sequence Data; Nucleic Acid Conformation; Point Mutation; RNA; RNA, Mitochondrial; RNA, Protozoan; RNA, Transfer; RNA, Transfer, Tyr; Sequence Analysis, RNA; Sequence Homology, Nucleic Acid; Trypanosoma brucei brucei	1994
5-Methylcytidine is required for cooperative binding of Mg2+ and a conformational transition at the anticodon stem-loop of yeast phenylalanine tRNA. Biochemistry, 1993, Sep-28, Volume: 32, Issue:38 Topics: Anticodon; Base Sequence; Circular Dichroism; Cytidine; Kinetics; Magnesium; Magnetic Resonance Spectroscopy; Molecular Sequence Data; Nucleic Acid Conformation; Oligoribonucleotides; RNA, Transfer, Phe; Saccharomyces cerevisiae	1993
5-formylcytidine (f5C) found at the wobble position of the anticodon of squid mitochondrial tRNA(Met)CAU. Nucleic acids symposium series, 1997, Issue:37 Topics: Animals; Anticodon; Base Sequence; Bivalvia; Cattle; Codon; Cytidine; Decapodiformes; Mitochondria; Models, Molecular; Molecular Sequence Data; Nematoda; Nucleic Acid Conformation; RNA, Transfer, Met	1997
Plant cytosolic tRNAHis possesses an exceptional C54 in the canonical TPsiC loop. Nucleic acids research, 1998, Jun-01, Volume: 26, Issue:11 Topics: Acylation; Anticodon; Arabidopsis; Base Sequence; Cell Nucleus; Cytidine; Cytosol; Genetic Complementation Test; Molecular Sequence Data; Nucleic Acid Conformation; RNA, Plant; RNA, Transfer, His; Transcription, Genetic	1998
Anticodon domain methylated nucleosides of yeast tRNA(Phe) are significant recognition determinants in the binding of a phage display selected peptide. Biochemistry, 2001, Nov-27, Volume: 40, Issue:47 Topics: Anticodon; Binding Sites; Cytidine; Guanosine; Models, Chemical; Nucleic Acid Conformation; Nucleosides; Peptide Library; Peptides; Protein Binding; RNA, Fungal; RNA, Transfer, Phe	2001
A cluster of metabolic defects caused by mutation in a mitochondrial tRNA. Science (New York, N.Y.), 2004, Nov-12, Volume: 306, Issue:5699 Topics: Adult; Aging; Anticodon; Body Mass Index; Cluster Analysis; Cytidine; Extrachromosomal Inheritance; Female; Humans; Hypercholesterolemia; Hypertension; Magnesium; Male; Metabolic Syndrome; Middle Aged; Mitochondria; Mitochondria, Muscle; Muscle Fibers, Skeletal; Mutation; Pedigree; Phenotype; RNA; RNA, Mitochondrial; RNA, Transfer, Ile; Syndrome; Thymidine; Uridine	2004
The RNA acetyltransferase driven by ATP hydrolysis synthesizes N4-acetylcytidine of tRNA anticodon. The EMBO journal, 2008, Aug-20, Volume: 27, Issue:16 Topics: Acetyltransferases; Adenosine Triphosphate; Amino Acid Sequence; Anticodon; Base Sequence; Cytidine; Escherichia coli; Escherichia coli Proteins; Genes, Bacterial; Guanosine Triphosphate; Hydrolysis; Kinetics; Mass Spectrometry; Molecular Sequence Data; Mutation; Nucleic Acid Conformation; Recombinant Proteins; Ribosomes; RNA, Transfer, Met; Sequence Alignment	2008
Synthesis and investigation of the 5-formylcytidine modified, anticodon stem and loop of the human mitochondrial tRNAMet. Nucleic acids research, 2008, Volume: 36, Issue:20 Topics: Anticodon; Base Sequence; Codon; Cytidine; Humans; Molecular Sequence Data; Nucleic Acid Conformation; Protein Biosynthesis; RNA; RNA, Mitochondrial; RNA, Transfer, Met; Thermodynamics	2008
Unconventional decoding of the AUA codon as methionine by mitochondrial tRNAMet with the anticodon f5CAU as revealed with a mitochondrial in vitro translation system. Nucleic acids research, 2009, Volume: 37, Issue:5 Topics: Animals; Anticodon; Base Pairing; Base Sequence; Cattle; Codon; Codon, Initiator; Cytidine; Escherichia coli; Methionine; Mitochondria; Molecular Sequence Data; Protein Biosynthesis; Ribosomes; RNA; RNA, Mitochondrial; RNA, Transfer, Met	2009
Agmatidine, a modified cytidine in the anticodon of archaeal tRNA(Ile), base pairs with adenosine but not with guanosine. Proceedings of the National Academy of Sciences of the United States of America, 2010, Feb-16, Volume: 107, Issue:7 Topics: Agmatine; Anticodon; Base Pairing; Chromatography, Liquid; Cytidine; Haloarcula marismortui; Methanococcus; Molecular Structure; RNA, Transfer, Ile; Sulfolobus solfataricus; Tandem Mass Spectrometry	2010
Agmatine-conjugated cytidine in a tRNA anticodon is essential for AUA decoding in archaea. Nature chemical biology, 2010, Volume: 6, Issue:4 Topics: Agmatine; Anticodon; Archaea; Catalysis; Cytidine; Ligases; RNA, Transfer	2010
The human mitochondrial tRNAMet: structure/function relationship of a unique modification in the decoding of unconventional codons. Journal of molecular biology, 2011, Feb-18, Volume: 406, Issue:2 Topics: Animals; Anticodon; Base Pairing; Base Sequence; Cattle; Cytidine; Escherichia coli; Humans; Mitochondria; Molecular Sequence Data; Ribosomes; RNA, Transfer, Met; Structure-Activity Relationship	2011
A domain of the actin binding protein Abp140 is the yeast methyltransferase responsible for 3-methylcytidine modification in the tRNA anti-codon loop. RNA (New York, N.Y.), 2011, Volume: 17, Issue:6 Topics: Anticodon; Cytidine; Microfilament Proteins; Nucleic Acid Conformation; Protein Structure, Tertiary; RNA, Transfer; S-Adenosylmethionine; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; tRNA Methyltransferases	2011
Structural basis of tRNA agmatinylation essential for AUA codon decoding. Nature structural & molecular biology, 2011, Oct-16, Volume: 18, Issue:11 Topics: Adenosine Triphosphate; Anticodon; Archaeal Proteins; Archaeoglobus fulgidus; Crystallography, X-Ray; Cytidine; Isoleucine-tRNA Ligase; Macromolecular Substances; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Protein Conformation; RNA, Archaeal; RNA, Transfer, Ile	2011
Decoding mechanism of non-universal genetic codes in Loligo bleekeri mitochondria. The Journal of biological chemistry, 2013, Mar-15, Volume: 288, Issue:11 Topics: Amino Acids; Animals; Anticodon; Codon; Cytidine; Genetic Code; Loligo; Mass Spectrometry; Mitochondria; Models, Genetic; Nucleic Acid Conformation; Nucleosides; Protein Structure, Secondary; RNA; RNA, Mitochondrial; RNA, Transfer	2013
Conformational preferences of modified nucleoside N(4)-acetylcytidine, ac4C occur at "wobble" 34th position in the anticodon loop of tRNA. Cell biochemistry and biophysics, 2013, Volume: 66, Issue:3 Topics: Anticodon; Base Pairing; Cytidine; Escherichia coli; Molecular Dynamics Simulation; RNA Stability; Rotation; Static Electricity	2013
RNA (New York, N.Y.), 2017, Volume: 23, Issue:3 Topics: Anticodon; Base Sequence; Binding Sites; Cloning, Molecular; Cytidine; Escherichia coli; Gene Expression; Microfilament Proteins; Nucleic Acid Conformation; Protein Binding; Protein Biosynthesis; Protein Domains; Recombinant Proteins; RNA, Transfer, Phe; RNA, Transfer, Ser; RNA, Transfer, Thr; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Substrate Specificity; tRNA Methyltransferases	2017
ALKBH1 is an RNA dioxygenase responsible for cytoplasmic and mitochondrial tRNA modifications. Nucleic acids research, 2017, Jul-07, Volume: 45, Issue:12 Topics: AlkB Homolog 1, Histone H2a Dioxygenase; Anticodon; Base Sequence; CRISPR-Cas Systems; Cytidine; Cytosol; Gene Knockout Techniques; Genetic Complementation Test; HEK293 Cells; Humans; Methyltransferases; Mitochondria; Nucleic Acid Conformation; Oxidation-Reduction; Oxidative Phosphorylation; Protein Biosynthesis; RNA, Transfer, Met	2017
Translation of non-standard codon nucleotides reveals minimal requirements for codon-anticodon interactions. Nature communications, 2018, 11-19, Volume: 9, Issue:1 Topics: 2-Aminopurine; Anticodon; Bacteriophage T7; Base Sequence; Codon; Cytidine; DNA-Directed RNA Polymerases; Escherichia coli; HEK293 Cells; Humans; Hydrogen Bonding; Inosine; Protein Biosynthesis; Pyridones; Receptor, Serotonin, 5-HT2C; Ribosomes; RNA, Transfer, Gly; Viral Proteins	2018
N Cell, 2018, 12-13, Volume: 175, Issue:7 Topics: Acetylation; Anticodon; Codon; Cytidine; RNA, Messenger	2018
Mutually exclusive substrate selection strategy by human m3C RNA transferases METTL2A and METTL6. Nucleic acids research, 2021, 08-20, Volume: 49, Issue:14 Topics: Anticodon; Cytidine; Humans; Nucleic Acid Conformation; RNA; RNA, Transfer; Serine-tRNA Ligase; Substrate Specificity; tRNA Methyltransferases	2021
Sequential action of a tRNA base editor in conversion of cytidine to pseudouridine. Nature communications, 2022, 10-11, Volume: 13, Issue:1 Topics: Anticodon; Cytidine; Cytidine Deaminase; Iron; Pseudouridine; RNA, Transfer	2022