cme-carbodiimide has been researched along with dimethyl sulfate in 29 studies
| Timeframe | Studies, this research(%) | All Research% |
|---|---|---|
| pre-1990 | 3 (10.34) | 18.7374 |
| 1990's | 13 (44.83) | 18.2507 |
| 2000's | 8 (27.59) | 29.6817 |
| 2010's | 2 (6.90) | 24.3611 |
| 2020's | 3 (10.34) | 2.80 |
| Authors | Studies |
|---|---|
| Lee, JC; Yeh, LC | 1 |
| Alford, RL; Belmont, JW; Honda, S; Lawrence, CB | 1 |
| Gerbi, SA; Stebbins-Boaz, B | 1 |
| Lee, JC; Thweatt, R; Yeh, LC | 1 |
| Faus, I; Richardson, JP | 1 |
| Jaeger, JA; Turner, DH; Zuker, M | 1 |
| Moazed, D; Noller, HF; Stern, S | 1 |
| Moazed, D; Noller, HF | 1 |
| Black, DL; Pinto, AL | 1 |
| Burke, JM; Butcher, SE | 1 |
| Holmberg, L; Nygård, O | 1 |
| Ajuh, PM; Maden, EB | 1 |
| Holmberg, L; Melander, Y; Nygård, O | 1 |
| Böck, A; Hüttenhofer, A; Westhof, E | 1 |
| Atkins, JF; Fayet, O; Gesteland, RF; Prère, MF; Rettberg, CC | 1 |
| Belasco, JG; Bricker, AL | 1 |
| Bogdanov, AA; Dahlberg, AE; Dontsova, O; Sergiev, PV | 1 |
| Larsson, SL; Nygård, O | 1 |
| Brosius, J; Hüttenhofer, A; Kopylov, AM; Rozhdestvensky, TS | 1 |
| Chou, J; Garlapati, S; Wang, CC | 1 |
| Nygård, O; Sloma, MS | 1 |
| Fabris, D; Kellersberger, KA; Kruppa, GH; Young, MM; Yu, E | 1 |
| Bailey, JM; Tapprich, WE | 1 |
| Engelke, DR; Ziehler, WA | 1 |
| Cech, TR; Dalby, AB; Goodrich, KJ; Pfingsten, JS | 1 |
| Allouche, D; Courban, A; Frezza, E; Pasquali, S; Sargueil, B | 1 |
| Behrens, SE; Friedrich, S; Schmidt, T | 1 |
| Andrade, JM; Arraiano, CM; Dos Santos, RF | 1 |
| Alghoul, F; Eriani, G; Martin, F | 1 |
29 other study(ies) available for cme-carbodiimide and dimethyl sulfate
| Article | Year |
|---|---|
Structure analysis of the 5' external transcribed spacer of the precursor ribosomal RNA from Saccharomyces cerevisiae.
Topics: Base Sequence; Carbodiimides; CME-Carbodiimide; Cross-Linking Reagents; DNA, Recombinant; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Phylogeny; Ribonucleases; RNA Precursors; RNA Processing, Post-Transcriptional; RNA, Fungal; RNA, Ribosomal; RNA, Ribosomal, 18S; RNA, Ribosomal, 5.8S; Saccharomyces cerevisiae; Sequence Analysis, RNA; Sulfuric Acid Esters; Transcription, Genetic | 1992 |
RNA secondary structure analysis of the packaging signal for Moloney murine leukemia virus.
Topics: Aldehydes; Algorithms; Animals; Antiviral Agents; Base Sequence; Butanones; Carbodiimides; Cell Line; CME-Carbodiimide; Computer Simulation; Molecular Sequence Data; Moloney murine leukemia virus; Mutagens; Nucleic Acid Conformation; Phylogeny; RNA, Viral; Sulfuric Acid Esters | 1991 |
Structural analysis of the peptidyl transferase region in ribosomal RNA of the eukaryote Xenopus laevis.
Topics: Aldehydes; Animals; Base Sequence; Butanones; Carbodiimides; CME-Carbodiimide; Molecular Sequence Data; Nucleic Acid Conformation; Peptidyl Transferases; Ribosomal Proteins; Ribosomes; RNA, Ribosomal, 28S; Substrate Specificity; Sulfuric Acid Esters; Xenopus laevis | 1991 |
Internal transcribed spacer 1 of the yeast precursor ribosomal RNA. Higher order structure and common structural motifs.
Topics: Alkylating Agents; Autoradiography; Base Sequence; Carbodiimides; CME-Carbodiimide; Computer Simulation; Endoribonucleases; Models, Chemical; Molecular Sequence Data; Nucleic Acid Conformation; Nucleic Acid Hybridization; Oligodeoxyribonucleotides; Ribonuclease T1; RNA Precursors; RNA, Ribosomal; Saccharomyces cerevisiae; Sulfuric Acid Esters; Transcription, Genetic | 1990 |
Structural and functional properties of the segments of lambda cro mRNA that interact with transcription termination factor Rho.
Topics: Adenosine Triphosphate; Alkylating Agents; Bacterial Proteins; Bacteriophage lambda; Base Sequence; CME-Carbodiimide; Endoribonucleases; Exoribonucleases; Molecular Sequence Data; Nucleic Acid Conformation; Rho Factor; RNA, Messenger; RNA, Viral; Sulfuric Acid Esters; Transcription Factors | 1990 |
Melting and chemical modification of a cyclized self-splicing group I intron: similarity of structures in 1 M Na+, in 10 mM Mg2+, and in the presence of substrate.
Topics: Aldehydes; Animals; Base Sequence; Butanones; Carbodiimides; CME-Carbodiimide; Computer Simulation; Cross-Linking Reagents; Diethyl Pyrocarbonate; Introns; Magnesium; Molecular Sequence Data; Nucleic Acid Conformation; Nucleic Acid Denaturation; RNA Splicing; RNA, Catalytic; Sodium; Sulfuric Acid Esters; Tetrahymena | 1990 |
Rapid chemical probing of conformation in 16 S ribosomal RNA and 30 S ribosomal subunits using primer extension.
Topics: Aldehydes; Autoradiography; Base Sequence; Butanones; CME-Carbodiimide; Escherichia coli; Macromolecular Substances; Models, Molecular; Nucleic Acid Conformation; Ribosomes; RNA, Bacterial; RNA, Ribosomal; Sulfuric Acid Esters | 1986 |
Transfer RNA shields specific nucleotides in 16S ribosomal RNA from attack by chemical probes.
Topics: Aldehydes; Butanones; CME-Carbodiimide; Escherichia coli; Poly U; Ribosomes; RNA, Bacterial; RNA, Fungal; RNA, Ribosomal; RNA, Transfer, Amino Acyl; Sulfuric Acid Esters; Yeasts | 1986 |
U5 small nuclear ribonucleoprotein: RNA structure analysis and ATP-dependent interaction with U4/U6.
Topics: Adenosine Triphosphate; Aldehydes; Base Sequence; Butanones; Centrifugation, Density Gradient; CME-Carbodiimide; Endoribonucleases; Molecular Sequence Data; Nucleic Acid Conformation; Ribonuclease H; Ribonucleoproteins; Ribonucleoproteins, Small Nuclear; RNA Probes; RNA, Small Nuclear; Sulfuric Acid Esters | 1989 |
Structure-mapping of the hairpin ribozyme. Magnesium-dependent folding and evidence for tertiary interactions within the ribozyme-substrate complex.
Topics: Base Sequence; Binding Sites; CME-Carbodiimide; Diethyl Pyrocarbonate; Magnesium; Molecular Sequence Data; Nucleic Acid Conformation; Organometallic Compounds; RNA, Catalytic; Structure-Activity Relationship; Sulfuric Acid Esters | 1994 |
Interaction sites of ribosome-bound eukaryotic elongation factor 2 in 18S and 28S rRNA.
Topics: Animals; Base Sequence; Binding Sites; Carcinoma, Ehrlich Tumor; CME-Carbodiimide; Cross-Linking Reagents; Guanosine Triphosphate; Mice; Micrococcal Nuclease; Molecular Sequence Data; Nucleic Acid Conformation; Peptide Elongation Factor 2; Peptide Elongation Factors; Ribosomes; RNA, Ribosomal, 18S; RNA, Ribosomal, 28S; Sulfuric Acid Esters | 1994 |
Chemical secondary structure probing of two highly methylated regions in Xenopus laevis 28S ribosomal RNA.
Topics: Animals; Base Sequence; CME-Carbodiimide; Cross-Linking Reagents; Methylation; Models, Molecular; Molecular Probes; Molecular Sequence Data; Nucleic Acid Conformation; RNA, Ribosomal, 28S; Sulfuric Acid Esters; Transcription, Genetic; Xenopus laevis | 1994 |
Probing the structure of mouse Ehrlich ascites cell 5.8S, 18S and 28S ribosomal RNA in situ.
Topics: Animals; Base Sequence; Carcinoma, Ehrlich Tumor; CME-Carbodiimide; Mice; Molecular Sequence Data; Nucleic Acid Conformation; RNA, Ribosomal, 18S; RNA, Ribosomal, 28S; RNA, Ribosomal, 5.8S; Sulfuric Acid Esters; Tumor Cells, Cultured | 1994 |
Solution structure of mRNA hairpins promoting selenocysteine incorporation in Escherichia coli and their base-specific interaction with special elongation factor SELB.
Topics: Aldehydes; Bacterial Proteins; Base Sequence; Butanones; CME-Carbodiimide; Computer Simulation; Cross-Linking Reagents; DNA Primers; Escherichia coli; Formate Dehydrogenases; Hydrogenase; Hydroxyl Radical; Lead; Molecular Probes; Molecular Sequence Data; Multienzyme Complexes; Nucleic Acid Conformation; Peptide Elongation Factors; RNA, Messenger; Selenocysteine; Single-Strand Specific DNA and RNA Endonucleases; Solutions; Sulfuric Acid Esters | 1996 |
A three-way junction and constituent stem-loops as the stimulator for programmed -1 frameshifting in bacterial insertion sequence IS911.
Topics: Aldehydes; Base Pairing; Base Sequence; Butanones; CME-Carbodiimide; DNA Transposable Elements; Escherichia coli; Frameshifting, Ribosomal; Imidazoles; Molecular Sequence Data; Mutation; Nucleic Acid Conformation; Recombination, Genetic; Regulatory Sequences, Nucleic Acid; Ribonucleases; RNA, Bacterial; RNA, Double-Stranded; RNA, Messenger; Structure-Activity Relationship; Sulfuric Acid Esters; Temperature | 1999 |
Importance of a 5' stem-loop for longevity of papA mRNA in Escherichia coli.
Topics: 5' Untranslated Regions; Alkylation; Bacterial Proteins; Base Sequence; CME-Carbodiimide; Escherichia coli; Escherichia coli Proteins; Fimbriae Proteins; Gene Expression Regulation, Bacterial; Genes, Bacterial; Half-Life; Nucleic Acid Conformation; RNA; RNA, Bacterial; RNA, Messenger; Sequence Deletion; Sulfuric Acid Esters | 1999 |
Mutations at position A960 of E. coli 23 S ribosomal RNA influence the structure of 5 S ribosomal RNA and the peptidyltransferase region of 23 S ribosomal RNA.
Topics: Aldehydes; Base Sequence; Binding Sites; Butanones; CME-Carbodiimide; Escherichia coli; Genes, Bacterial; GTP Phosphohydrolases; Molecular Sequence Data; Mutation; Nucleic Acid Conformation; Peptidyl Transferases; Phenotype; Protein Biosynthesis; Ribosomes; RNA-Binding Proteins; RNA, Bacterial; RNA, Ribosomal, 23S; RNA, Ribosomal, 5S; RNA, Transfer; rRNA Operon; Structure-Activity Relationship; Sulfuric Acid Esters | 2000 |
Proposed secondary structure of eukaryote specific expansion segment 15 in 28S rRNA from mice, rats, and rabbits.
Topics: Aldehydes; Animals; Base Sequence; Butanones; CME-Carbodiimide; Conserved Sequence; Cross-Linking Reagents; Mice; Molecular Sequence Data; Nucleic Acid Conformation; Rabbits; Rats; Rats, Sprague-Dawley; Ribosomal Proteins; Ribosomes; RNA, Ribosomal, 28S; Sequence Alignment; Sequence Analysis, RNA; Structure-Activity Relationship; Sulfuric Acid Esters | 2001 |
Neuronal BC1 RNA structure: evolutionary conversion of a tRNA(Ala) domain into an extended stem-loop structure.
Topics: Aldehydes; Animals; Base Sequence; Butanones; CME-Carbodiimide; Cricetinae; Cricetulus; Evolution, Molecular; Guinea Pigs; Mice; Models, Molecular; Molecular Sequence Data; Neurons; Nucleic Acid Conformation; Poly A; Rats; RNA, Small Cytoplasmic; RNA, Transfer, Ala; Sciuridae; Sulfuric Acid Esters | 2001 |
Specific secondary structures in the capsid-coding region of giardiavirus transcript are required for its translation in Giardia lamblia.
Topics: Aldehydes; Animals; Base Pairing; Base Sequence; Butanones; Capsid; CME-Carbodiimide; Gene Expression Regulation, Viral; Giardia lamblia; Giardiavirus; Mutation; Nucleic Acid Conformation; Protein Biosynthesis; RNA Stability; RNA, Messenger; RNA, Viral; Software; Structure-Activity Relationship; Sulfuric Acid Esters; Thermodynamics; Transfection | 2001 |
Possible interaction sites of mRNA, tRNA, translation factors and the nascent peptide in 5S, 5.8S and 28S rRNA in in vivo assembled eukaryotic ribosomal complexes.
Topics: Animals; Binding Sites; CME-Carbodiimide; Eukaryotic Cells; Ligands; Liver; Mice; Peptide Initiation Factors; Polyribosomes; Protein Structure, Secondary; Protein Structure, Tertiary; RNA, Messenger; RNA, Ribosomal, 28S; RNA, Ribosomal, 5.8S; RNA, Ribosomal, 5S; RNA, Transfer; Sulfuric Acid Esters | 2001 |
Top-down characterization of nucleic acids modified by structural probes using high-resolution tandem mass spectrometry and automated data interpretation.
Topics: Aldehydes; Automation; Butanones; CME-Carbodiimide; Databases, Factual; HIV-1; Nucleic Acids; Sensitivity and Specificity; Spectrometry, Mass, Electrospray Ionization; Spectroscopy, Fourier Transform Infrared; Sulfuric Acid Esters | 2004 |
Structure of the 5' nontranslated region of the coxsackievirus b3 genome: Chemical modification and comparative sequence analysis.
Topics: 5' Untranslated Regions; Aldehydes; Algorithms; Base Sequence; Butanones; CME-Carbodiimide; Enterovirus B, Human; Genome, Viral; Humans; Molecular Sequence Data; Nucleic Acid Conformation; RNA, Viral; Sequence Analysis, DNA; Structure-Activity Relationship; Sulfuric Acid Esters | 2007 |
Probing RNA structure with chemical reagents and enzymes.
Topics: Aldehydes; Bacteriophage T4; Base Pairing; Biochemistry; Butanones; CME-Carbodiimide; Diethyl Pyrocarbonate; Electrophoresis; Endonucleases; Ethylnitrosourea; Indicators and Reagents; Nucleic Acid Conformation; Phosphorus Radioisotopes; Polynucleotide 5'-Hydroxyl-Kinase; Reference Standards; RNA; Sulfuric Acid Esters | 2001 |
RNA recognition by the DNA end-binding Ku heterodimer.
Topics: Base Sequence; Binding Sites; Cell Nucleus; CME-Carbodiimide; DNA Footprinting; DNA-Binding Proteins; Electrophoresis, Polyacrylamide Gel; Inverted Repeat Sequences; Mutation; Nucleic Acid Conformation; Nucleotide Motifs; Phosphorothioate Oligonucleotides; Protein Interaction Mapping; RNA; RNA Cleavage; RNA-Binding Proteins; RNA, Fungal; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins; Sulfuric Acid Esters; Telomerase | 2013 |
The interplay between molecular flexibility and RNA chemical probing reactivities analyzed at the nucleotide level via an extensive molecular dynamics study.
Topics: Acylation; CME-Carbodiimide; Hydrogen Bonding; Hydroxyl Radical; Indicators and Reagents; Molecular Dynamics Simulation; Nucleic Acid Conformation; Nucleotides; RNA; Sulfuric Acid Esters | 2019 |
RNA Remodeling by RNA Chaperones Monitored by RNA Structure Probing.
Topics: Animals; Cell Line; CME-Carbodiimide; Humans; Molecular Chaperones; Molecular Probe Techniques; RNA; RNA Folding; RNA Processing, Post-Transcriptional; Sequence Analysis, RNA; Sulfuric Acid Esters | 2020 |
RNA Structure Analysis by Chemical Probing with DMS and CMCT.
Topics: Animals; Cell Line; CME-Carbodiimide; Humans; Molecular Chaperones; Molecular Probe Techniques; RNA Folding; RNA-Binding Proteins; RNA, Ribosomal; Sulfuric Acid Esters | 2020 |
RNA Secondary Structure Study by Chemical Probing Methods Using DMS and CMCT.
Topics: 5' Untranslated Regions; CME-Carbodiimide; DNA Primers; Fluorescent Dyes; Models, Molecular; Nucleic Acid Conformation; RNA; RNA Folding; Sulfuric Acid Esters | 2021 |