chlorophyll-a and bacteriopheophytin

Topics: Bacterial Physiological Phenomena; Bacteriochlorophylls; Chlorophyll; Chromatium; Pheophytins; Photosynthesis; Pigments, Biological; Rhodopseudomonas; Rhodospirillum rubrum

Photosynthetic reaction centres harvest the energy content of sunlight by transporting electrons across an energy-transducing biological membrane. Here we use time-resolved serial femtosecond crystallography

Topics: Bacteriochlorophylls; Binding Sites; Chlorophyll; Crystallography; Cytoplasm; Electron Transport; Electrons; Hyphomicrobiaceae; Lasers; Models, Molecular; Oxidation-Reduction; Pheophytins; Photosynthetic Reaction Center Complex Proteins; Protons; Ubiquinone; Vitamin K 2

All of the membrane-embedded cofactors of the purple bacterial reaction centre have well-defined functional or structural roles, with the exception of the bacteriopheophytin (H(B)) located approximately half-way across the membrane on the so-called inactive- or B-branch of cofactors. Sequence alignments indicate that this bacteriochlorin cofactor is a conserved feature of purple bacterial reaction centres, and a pheophytin is also found at this position in the Photosystem-II reaction centre. Possible structural or functional consequences of replacing the H(B) bacteriopheophytin by bacteriochlorophyll were investigated in the Rhodobacter sphaeroides reaction centre through mutagenesis of residue Leu L185 to His (LL185H). Results from absorbance spectroscopy indicated that the LL185H mutant assembled with a bacteriochlorophyll at the H(B) position, but this did not affect the capacity of the reaction centre to support photosynthetic growth, or change the kinetics of charge separation along the A-branch of cofactors. It was also found that mutation of residue Ala M149 to Trp (AM149W) caused the reaction centre to assemble without an H(B) bacteriochlorin, demonstrating that this cofactor is not required for correct assembly of the reaction centre. The absence of a cofactor at this position did not affect the capacity of the reaction centre to support photosynthetic growth, or the kinetics of A-branch electron transfer. A combination of X-ray crystallography and FTIR difference spectroscopy confirmed that the H(B) cofactor was absent in the AM149W mutant, and that this had not produced any significant disturbance of the adjacent ubiquinol reductase (Q(B)) site. The data are discussed with respect to possible functional roles of the H(B) bacteriopheophytin, and we conclude that the reason(s) for conservation of a bacteriopheophytin cofactor at this position in purple bacterial reaction centres are likely to be different from those underlying conservation of a pheophytin at the analogous position in Photosystem-II.

Topics: Chlorophyll; Color; Crystallography, X-Ray; Models, Molecular; Molecular Conformation; Mutation; Phenotype; Pheophytins; Photosynthetic Reaction Center Complex Proteins; Rhodobacter sphaeroides; Spectrum Analysis; Temperature

Resonance Raman (RR) spectra are reported for the photosynthetic reaction center (RC) protein from Rhodobacter sphaeroides 2.4.1. The spectra were obtained with a variety of excitation wavelengths, spanning the UV, violet, and yellow-green regions of the absorption spectrum, and at a number of temperatures ranging from 30 to 270 K. The RR data indicate that the frequencies of certain vibrational modes of the bacteriochlorin pigments in the RC shift with temperature. These shifts are reversible and do not depend on external factors such as solvent or detergent. The acetyl carbonyl bands exhibit the largest shifts with temperature. These shifts are attributed to thermal effects involving the torsional vibrations of the acetyl groups of several (or all) of the bacteriochlorins rather than to specific pigment-protein interactions. The frequency of the structure-sensitive skeletal mode near 1610 cm-1 of one of the two bacteriopheophytins (BPhs) in the RC is also sensitive to temperature. In contrast, no temperature sensitivity is observed for the analogous modes of the bacteriochlorophylls or other BPhs. Over the range 160-100 K, the skeletal mode of the BPh upshifts by approximately 4 cm-1. This upshift is attributed to a flattening of the macrocycle at low temperatures. It is suggested that the BPh active in the electron-transfer process is the pigment whose structure is temperature dependent. It is further suggested that such structural changes could be responsible in part for the temperature dependence of the electron-transfer rates in photosynthetic RCs.

Topics: Bacterial Proteins; Chlorophyll; Electron Transport; Molecular Conformation; Pheophytins; Photosynthetic Reaction Center Complex Proteins; Rhodobacter sphaeroides; Spectrum Analysis, Raman; Temperature

A comparison is made between the PQA----P+QA- and PQAQB----P+QAQB-transitions in Rps. viridis and Rb. sphaeroides reaction centers (RCs) by the use of light-induced Fourier transform infrared (FTIR) difference spectroscopy. In Rb. sphaeroides RCs, we identify a signal at 1650 cm-1 which is present in the P+QA-minus-PQA spectrum and not in the P+QAQB(-)-minus-PQAQB spectrum. In contrast, this signal is present in both P+QA(-)-minus-PQA- and P+QAQB(-)-minus-PQAQB spectra of Rps. viridis RCs. These data are interpreted in terms of a conformational change of the protein backbone near QA (possible at the peptide C = O of a conserved alanine residue in the QA pocket) and of the different bonding interactions of QB with the protein in the RC of the two species.

Topics: Bacterial Proteins; Bacteriochlorophylls; Chlorophyll; Oxidation-Reduction; Pheophytins; Photosynthesis; Protein Conformation; Quinones; Rhodopseudomonas; Spectrophotometry, Infrared

The three-dimensional structures of the cofactors and protein subunits of the reaction center (RC) from the carotenoidless mutant strain of Rhodobacter sphaeroides R-26 and the wild-type strain 2.4.1 have been determined by x-ray diffraction to resolutions of 2.8 A and 3.0 A with R values of 24% and 26%, respectively. The bacteriochlorophyll dimer (D), bacteriochlorophyll monomers (B), and bacteriopheophytin monomers (phi) form two branches, A and B, that are approximately related by a twofold symmetry axis. The cofactors are located in hydrophobic environments formed by the L and M subunits. Differences in the cofactor-protein interactions between the A and B cofactors, as well as between the corresponding cofactors of Rb, sphaeroides and Rhodopseudomonas viridis [Michel, H., Epp, O. & Deisenhofer, J. (1986) EMBO J. 3, 2445-2451], are delineated. The roles of several structural features in the preferential electron transfer along the A branch are discussed. Two bound detergent molecules of beta-octyl glucoside have been located near BA and BB. The environment of the carotenoid, C, that is present in RCs from Rb. sphaeroides 2.4.1 consists largely of aromatic residues of the M subunit. A role of BB in the triplet energy transfer from D to C and the reason for the preferential ease of removal of BB from the RC is proposed.

Topics: Bacteriochlorophylls; Carotenoids; Chlorophyll; Computer Simulation; Pheophytins; Photosynthesis; Rhodopseudomonas; Stereoisomerism; X-Ray Diffraction

The rate of the electron-transfer reaction between bacteriopheophytin and the first quinone in isolated reaction centers of Rhodopseudomonas sphaeroides has an unusual temperature dependence. The rate increases about threefold with decreasing temperature between 300 and 25 K, and decreases abruptly at temperatures below 25 K. Partial deuteration of the reaction centers alters the temperature dependence of the rate constant. Qualitative features of the temperature dependence can be understood in the context of a theory of nonadiabatic electron transfer (Sarai, 1980. Biochim. Biophys. Acta 589:71-83). We conclude that very low-energy (10-50 cm-1) processes, perhaps skeletal vibrations of the protein, are important to electron transfer. Higher-energy vibrations, possibly involving the pyrrolic N--H bonds of bacteriopheophytin, also are important in this process.

Topics: Chlorophyll; Deuterium; Electron Transport; Kinetics; Pheophytins; Protons; Rhodobacter sphaeroides; Temperature; Ubiquinone

Photosynthetic reaction centers isolated from Rhodopseudomonas sphaeroides strain R-26 were excited with non-saturating 7-ps, 600-nm flashes under various conditions, and the resulting absorbance changes were measured. If the quinone electron acceptor (Q) is in the oxidized state, flash excitation generates a transient state (PF), in which an electron has moved from the primary electron donor (P, a dimer of bacteriochlorophylls) to an acceptor complex involving a special bacteriopheophytin (H) and another bacteriochlorophyll (B). PF decays in 200 ps as an electron moves from H to Q and the acceptor complex are reduced photochemically before the excitation, the flash generates a different transient state of P with a high quantum yield. This state decays with a lifetime of 340 ps. There is no indication of electron transfer from P to B under these conditions, but this does not rule out the possibility that B is an intermediate electron carrier between P and H. Measurements of the yield of fluorescence from P under various conditions show that the 340 ps state is not the fluorescent excited singlet state of P. The transient state could be a triplet state, a charge-transfer state of P, or another excited singlet state that is not fluorescent.

Topics: Aerobiosis; Chlorophyll; Darkness; Electron Transport; Kinetics; Light; Pheophytins; Photosynthesis; Quantum Theory; Rhodobacter sphaeroides; Spectrophotometry

The primary electron transfer processes in isolated reaction centers of Rhodopseudomonas sphaeroides have been investigated with subpicosecond and picosecond spectroscopic techniques. Spectra and kinetics of the absorbance changes following excitation with 0.7-ps 610-nm pulses, absorbed predominantly by bacteriochlorophyll (BChl), indicate that the radical pair state P+BPh-, in which an electron has been transferred from the BChl dimer (P) to a bacteriopheophytin (BPh), is formed with a time constant no greater than 4 ps. The initial absorbance changes also reveal an earlier state, which could be an excited singlet state, or a P+BChl- radical pair. The bleaching at 870 nm produced by 7 ps excitation at 530 nm (absorbed by BPh) or at 600 nm (absorbed predominantly by BChl) shows no resolvable delay with respect to standard compounds in solution, suggesting that the time for energy transfer from BPh to P is less than 7 ps. However, the bleaching in the BPh band at 545 nm following 7-ps 600-nm excitation, exhibits an 8- to 10-ps lag with respect to standard compounds. This finding is qualitatively similar to the 35-ps delay previously observed at 760 nm by Shuvalov at al. (Shuvalov, V.A., Klevanik, A.V., Sharkov, A.V., Matveetz, Y.A. and Kryukov, P.G. (1978) FEBS Lett. 91, 135-139) when 25-ps 880-nm excitation flashes were used. A delay in the bleaching approximately equal to the width of the excitation flash can be explained in terms of the opposing effects of bleaching due to the reduction of BPh, and absorbance increases due to short-lived excited states (probably of BChl) that turn over rapidly during the flash. The decay of the initial bleaching at 800 nm produced by 7-ps 530- or 600-nm excitation flashes shows a fast component with a 30-ps time constant, in addition to a slower component having the 200-ps kinetics expected for the decay of P+BPh-. the dependence on excitation intensity of the absorbance changes due to the 30-p]s component indicate that the quantum yield of the state responsible for this step is lower than that observed for the primary electron transfer reactions. This suggests that at least part of the transient bleaching at 800 nm is due to a secondary process, possibly caused by excitation with an excessive number of photons. If the 800-nm absorbing BChl (B) acts as an intermediate electron carrier in the primary photochemical reaction, electron transfer between B and the BPh must have a time constant no greater than 4 ps.

Topics: Bacteriochlorophylls; Chlorophyll; Electron Transport; Kinetics; Light; Macromolecular Substances; Oxidation-Reduction; Pheophytins; Rhodobacter sphaeroides; Spectrophotometry; Time Factors

Topics: Bacteriochlorophylls; Carotenoids; Chlorophyll; Chromatiaceae; Peptides; Pheophytins; Rhodopseudomonas; Spectrum Analysis

Linear dichroism measurements of reaction centers of Rhodopseudomonas sphaeroides in stretched gelatin films have yielded angles that various optical transition moments make with an axis of symmetry in the reaction center. Photoselection experiments have yielded angles that certain transition moments make with each other. We have combined these data so as to compute the orientations of the Qx and Qy transition moments of the two molecules of bacteriopheophytin and of the bacteriochlorophyll special pair (photochemical electron donor) in the reaction center. Orientations are expressed in spherical polar coordinates with the symmetry axis as the pole. We have also computed additional angles between pairs of transition moments. In this treatment we have assumed that the bacteriopheophytins are independent monomers with little or no exciton coupling.

Topics: Bacteriochlorophylls; Chlorophyll; Oxidation-Reduction; Pheophytins; Protein Conformation; Rhodobacter sphaeroides; Spectrophotometry

Topics: Anions; Bacteriochlorophylls; Chlorophyll; Electrochemistry; Electron Spin Resonance Spectroscopy; Pheophytins; Photochemistry

Topics: Bacterial Chromatophores; Bacteriochlorophylls; Chlorophyll; Chromatium; Kinetics; Light; Oxidation-Reduction; Pheophytins; Photosynthesis; Spectrophotometry; Spectrophotometry, Infrared