Page last updated: 2024-08-17

aspartic acid and 11-cis-retinal

aspartic acid has been researched along with 11-cis-retinal in 55 studies

Research

Studies (55)

Timeframe	Studies, this research(%)	All Research%
pre-1990	8 (14.55)	18.7374
1990's	12 (21.82)	18.2507
2000's	26 (47.27)	29.6817
2010's	9 (16.36)	24.3611
2020's	0 (0.00)	2.80

Authors

Authors	Studies
Goridis, C	1
Donner, KO; Hemilä, SO	1
Benovic, JL; Caron, MG; Lefkowitz, RJ; Onorato, JJ; Palczewski, K; Regan, JW	1
Nathans, J	2
De Caluwé, GL; De Grip, WJ; Janssen, JJ	1
Franke, RR; Khorana, HG; Sakmar, TP	1
Oprian, DD; Zhukovsky, EA	1
Bridges, CD; Chytil, F; Olson, JA; Packer, L; Wolf, G	1
Anderson, RE; Hollyfield, JG; Verner, GE	1
Fuchs, S; Gal, A; Millán, JM; Nájera, C; Paricio, N; Prieto, F; Wedemann, H	1
Beck, M; Fahmy, K; Jäger, F; Sakmar, TP; Siebert, F; Zvyaga, TA	1
Bovee-Geurts, PH; DeCaluwé, LL; DeGrip, WJ; Rath, P; Rothschild, KJ	1
Iwasa, T; Masuda, S; Morita, EH; Tasumi, M; Tsuda, M	1
Pugh, EN; Reiser, MA; Williams, TP	1
Fahmy, K; Sakmar, TP; Siebert, F; Zvyaga, TA	1
Degrip, WJ; Delange, F; Rath, P; Rothschild, KJ	1
Kandori, H; Maeda, A; Nagata, T; Shichida, Y; Terakita, A	1
Singer, MS	1
Shichida, Y; Terakita, A; Yamashita, T	1
Arendt, A; Brannock, MT; Hargrave, PA; McDowell, JH; Miller, RL; Robinson, PR; Smith, WC	1
Farrens, DL; Janz, JM	1
Bovee-Geurts, PH; Breikers, G; DeCaluwé, GL; DeGrip, WJ	1
Fahrenkrug, J; Knudsen, SM; Tams, JW	1
Ballesteros, JA; Barrondo, S; Behamú, B; Deupi, X; López-Rodríguez, ML; Morcillo, MJ; Olivella, M; Pardo, L; Sallés, J; Vicente, B	1
Ataka, K; Bamberg, E; Chizhov, I; Engelhard, M; Friedrich, T; Geibel, S; Heberle, J; Kalmbach, R	1
Gross, AK; Oprian, DD; Xie, G	2
Bálint, Z; Dioumaev, AK; Lanyi, JK; Váró, G; Wang, JM	1
Huang, ES	1
TSUMURA, S	2
Balashov, SP; Dioumaev, AK; Imasheva, ES; Lanyi, JK; Wang, JM	1
Kazmi, MA; Kliger, DS; Lewis, JW; Sakmar, TP; Szundi, I	1
Claeysen, S; Costagliola, S; Deupí, X; Govaerts, C; Pardo, L; Urizar, E; Vassart, G	1
Braiman, MS; Caterino, TL; Krebs, R; Partha, R	1
Benhamú, B; Campillo, M; de la Fuente, T; López-Rodríguez, ML; Pardo, L; Sanz, A	1
Balashov, SP; Imasheva, ES; Kamo, N; Lanyi, JK; Sheves, M; Shimono, K; Wang, JM; Zadok, U	1
Höltje, HD; Schlegel, B; Sippl, W	1
Birge, RR; Galan, J; Hillebrecht, JR; McCleary, K; Ramos, L; Rangarajan, R; Stuart, JA; Ward, DE	1
Brown, LS; Fan, Y; Furutani, Y; Kandori, H; Shi, L; Sumii, M; Waschuk, SA	1
Alexiev, U; Fahmy, K; Lehmann, N	1
Barrett, R; Bush, RA; Dizhoor, AM; Fain, GL; Olshevskaya, EV; Peshenko, IV; Savchenko, AB; Sieving, PA; Woodruff, ML	1
Amsden, JJ; Bergo, VB; Kralj, JM; Rothschild, KJ; Spudich, EN; Spudich, JL	1
Cilluffo, MC; Cornwall, MC; Dizhoor, AM; Fain, GL; Olshevskaya, EV; Sieving, PA; Woodruff, ML	1
Chou, CL; Lin, CS; Palmer, N; Tsang, SH; Tsui, I	1
Fiedler, SA; Glaubitz, C; Hempelmann, F; Hölper, S; Köhler, T; Pfleger, N; Verhoefen, MK; Wachtveitl, J; Woerner, AC	1
Bamann, C; Glaubitz, C; Herz, J; Verhoefen, MK; Wachtveitl, J; Weber, I	1
Bamann, C; Bamberg, E; Becker-Baldus, J; Glaubitz, C; Janke, C; Scholz, F; Wachtveitl, J; Wood, PG	1
Heberle, J; Lórenz-Fonfría, VA	1
Li, H; Mamaev, S; Ogren, JI; Rothschild, KJ; Russano, D; Spudich, JL	1
Bagg, EE; Britt, SG; Farrell, DM; Fulton, RM; Manino, M; Salcedo, E; Zheng, L	1
Govorunova, EG; Li, H; Sineshchekov, OA; Spudich, JL	1
Demura, M; Kamo, N; Kikukawa, T; Kimura-Someya, T; Miyauchi, S; Nara, T; Ohkawa, K; Ohsawa, N; Shimono, K; Shirouzu, M; Tamogami, J; Yokoyama, S	1
Banerjee, A; Ray, S	1

Reviews

1 review(s) available for aspartic acid and 11-cis-retinal

Article	Year
Channelrhodopsin unchained: structure and mechanism of a light-gated cation channel. Biochimica et biophysica acta, 2014, Volume: 1837, Issue:5 Topics: Aspartic Acid; Chlamydomonas reinhardtii; Glutamic Acid; Hydrogen-Ion Concentration; Ion Channel Gating; Ion Transport; Kinetics; Light; Models, Molecular; Protein Conformation; Protons; Retinaldehyde; Rhodopsin; Thermodynamics; Time Factors	2014

Other Studies

54 other study(ies) available for aspartic acid and 11-cis-retinal

Article	Year
The effect of flash illumination on the endogenous cyclic GMP content of isolated frog retinae. Experimental eye research, 1977, Volume: 24, Issue:2 Topics: Animals; Anura; Aspartic Acid; Cyclic AMP; Cyclic GMP; In Vitro Techniques; Photic Stimulation; Photoreceptor Cells; Rana esculenta; Retina; Rhodopsin	1977
Dark-adaptation of the aspartate-isolated rod receptor potential of the frog retina: threshold measurements. The Journal of physiology, 1979, Volume: 287 Topics: Animals; Anura; Aspartic Acid; Dark Adaptation; In Vitro Techniques; Kinetics; Membrane Potentials; Photoreceptor Cells; Rana temporaria; Regeneration; Retina; Rhodopsin; Temperature; Time Factors	1979
Role of acidic amino acids in peptide substrates of the beta-adrenergic receptor kinase and rhodopsin kinase. Biochemistry, 1991, May-28, Volume: 30, Issue:21 Topics: Amino Acid Sequence; Animals; Aspartic Acid; beta-Adrenergic Receptor Kinases; Cattle; Cerebral Cortex; Cyclic AMP-Dependent Protein Kinases; Eye Proteins; G-Protein-Coupled Receptor Kinase 1; Glutamates; Molecular Sequence Data; Peptides; Phosphorylation; Protein Kinases; Receptors, Adrenergic, beta; Rhodopsin; Structure-Activity Relationship; Substrate Specificity	1991
Determinants of visual pigment absorbance: identification of the retinylidene Schiff's base counterion in bovine rhodopsin. Biochemistry, 1990, Oct-16, Volume: 29, Issue:41 Topics: Animals; Asparagine; Aspartic Acid; Cattle; Glutamates; Glutamic Acid; Glutamine; Kinetics; Membranes; Models, Molecular; Mutagenesis, Site-Directed; Plasmids; Protein Conformation; Recombinant Proteins; Retinaldehyde; Rhodopsin; Schiff Bases; Spectrophotometry	1990
Asp83, Glu113 and Glu134 are not specifically involved in Schiff base protonation or wavelength regulation in bovine rhodopsin. FEBS letters, 1990, Jan-15, Volume: 260, Issue:1 Topics: Animals; Aspartic Acid; Cattle; Energy Transfer; Glutamates; GTP-Binding Proteins; Mutation; Protein Engineering; Recombinant Proteins; Retinal Pigments; Rhodopsin; Schiff Bases; Second Messenger Systems; Spectrophotometry	1990
Determinants of visual pigment absorbance: role of charged amino acids in the putative transmembrane segments. Biochemistry, 1990, Jan-30, Volume: 29, Issue:4 Topics: Amino Acid Sequence; Animals; Arginine; Aspartic Acid; Cattle; Gene Expression; Glutamates; Histidine; Lysine; Membrane Proteins; Molecular Sequence Data; Molecular Structure; Mutation; Retinal Pigments; Retinaldehyde; Rhodopsin; Spectrophotometry	1990
Glutamic acid-113 serves as the retinylidene Schiff base counterion in bovine rhodopsin. Proceedings of the National Academy of Sciences of the United States of America, 1989, Volume: 86, Issue:21 Topics: Amino Acid Sequence; Animals; Aspartic Acid; Cattle; Glutamates; Glutamic Acid; GTP Phosphohydrolases; Kinetics; Membrane Proteins; Molecular Sequence Data; Mutation; Protein Conformation; Retinal Pigments; Retinoids; Rhodopsin; Schiff Bases; Sequence Homology, Nucleic Acid; Transducin	1989
Effect of carboxylic acid side chains on the absorption maximum of visual pigments. Science (New York, N.Y.), 1989, Nov-17, Volume: 246, Issue:4932 Topics: Aspartic Acid; Glutamates; Glutamic Acid; Hydrogen-Ion Concentration; Hydroxylamine; Hydroxylamines; Models, Molecular; Mutation; Protein Conformation; Retinal Pigments; Retinaldehyde; Retinoids; Rhodopsin; Schiff Bases; Spectrophotometry	1989
The function of vitamin A. Federation proceedings, 1983, Volume: 42, Issue:10 Topics: Animals; Arginine; Aspartic Acid; Bacteriorhodopsins; Biological Transport; Cell Differentiation; Cell Nucleus; Glutamates; Glutamic Acid; Halorhodopsins; Humans; Lysine; Ocular Physiological Phenomena; Rhodopsin; Tyrosine; Vitamin A	1983
Regional effects of sodium aspartate and sodium glutamate on protein synthesis in the retina. Investigative ophthalmology & visual science, 1981, Volume: 21, Issue:4 Topics: Animals; Aspartic Acid; Autoradiography; Eye Proteins; Glutamates; In Vitro Techniques; Metabolism; Photoreceptor Cells; Retina; Rhodopsin; Sodium Glutamate; Xenopus laevis	1981
Gly114Asp mutation of rhodopsin in autosomal dominant retinitis pigmentosa. Molecular and cellular probes, 1995, Volume: 9, Issue:1 Topics: Adolescent; Adult; Amino Acid Sequence; Aspartic Acid; Base Sequence; Codon; Female; Genes, Dominant; Glycine; Humans; Male; Middle Aged; Molecular Sequence Data; Pedigree; Point Mutation; Polymorphism, Genetic; Retinitis Pigmentosa; Rhodopsin	1995
Protonation states of membrane-embedded carboxylic acid groups in rhodopsin and metarhodopsin II: a Fourier-transform infrared spectroscopy study of site-directed mutants. Proceedings of the National Academy of Sciences of the United States of America, 1993, Nov-01, Volume: 90, Issue:21 Topics: Amino Acid Sequence; Animals; Asparagine; Aspartic Acid; Cell Line; Glutamates; Glutamic Acid; Glutamine; Kinetics; Light; Mutagenesis, Site-Directed; Protein Conformation; Recombinant Proteins; Retinaldehyde; Rhodopsin; Spectrophotometry; Spectroscopy, Fourier Transform Infrared; Time Factors; Transfection	1993
Fourier transform infrared difference spectroscopy of rhodopsin mutants: light activation of rhodopsin causes hydrogen-bonding change in residue aspartic acid-83 during meta II formation. Biochemistry, 1993, Oct-05, Volume: 32, Issue:39 Topics: Animals; Aspartic Acid; Cattle; Hydrogen Bonding; Light; Mutagenesis, Site-Directed; Photochemistry; Protein Structure, Secondary; Rhodopsin; Spectroscopy, Fourier Transform Infrared	1993
Infrared studies of octopus rhodopsin. Existence of a long-lived intermediate and the states of the carboxylic group of Asp-81 in rhodopsin and its photoproducts. FEBS letters, 1993, Feb-15, Volume: 317, Issue:3 Topics: Animals; Aspartic Acid; Octopodiformes; Photochemistry; Protein Conformation; Rhodopsin; Spectrophotometry, Infrared	1993
The effect of light history on the aspartate-isolated fast-PIII responses of the albino rat retina. Investigative ophthalmology & visual science, 1996, Volume: 37, Issue:1 Topics: Animals; Aspartic Acid; Dark Adaptation; Electroretinography; Female; Light; Male; Photoreceptor Cells; Rats; Rats, Sprague-Dawley; Retina; Rhodopsin; Sensory Thresholds; Signal Transduction	1996
Characterization of the mutant visual pigment responsible for congenital night blindness: a biochemical and Fourier-transform infrared spectroscopy study. Biochemistry, 1996, Jun-11, Volume: 35, Issue:23 Topics: Aspartic Acid; Glycine; Humans; Hydroxylamine; Hydroxylamines; Kinetics; Mutagenesis, Site-Directed; Night Blindness; Point Mutation; Recombinant Proteins; Retinal Rod Photoreceptor Cells; Rhodopsin; Rod Opsins; Schiff Bases; Spectroscopy, Fourier Transform Infrared; Transducin	1996
Hydrogen bonding changes of internal water molecules in rhodopsin during metarhodopsin I and metarhodopsin II formation. The Biochemical journal, 1998, Feb-01, Volume: 329 ( Pt 3) Topics: Amino Acid Substitution; Animals; Aspartic Acid; Cattle; Hydrogen Bonding; Rhodopsin; Rod Cell Outer Segment; Spectroscopy, Fourier Transform Infrared; Spodoptera; Structure-Activity Relationship; Water	1998
The hydrogen-bonding network of water molecules and the peptide backbone in the region connecting Asp83, Gly120, and Glu113 in bovine rhodopsin. Biochemistry, 1998, Dec-08, Volume: 37, Issue:49 Topics: Animals; Aspartic Acid; Carboxylic Acids; Cattle; Glutamic Acid; Glycine; Hydrogen Bonding; Peptide Fragments; Protein Conformation; Rhodopsin; Spectroscopy, Fourier Transform Infrared; Water	1998
Analysis of the molecular basis for octanal interactions in the expressed rat 17 olfactory receptor. Chemical senses, 2000, Volume: 25, Issue:2 Topics: Aldehydes; Amino Acid Sequence; Amino Acid Substitution; Animals; Aspartic Acid; Binding Sites; Ligands; Lysine; Models, Molecular; Molecular Sequence Data; Mutagenesis, Site-Directed; Protein Conformation; Rats; Receptors, Odorant; Rhodopsin; Structure-Activity Relationship	2000
Highly conserved glutamic acid in the extracellular IV-V loop in rhodopsins acts as the counterion in retinochrome, a member of the rhodopsin family. Proceedings of the National Academy of Sciences of the United States of America, 2000, Dec-19, Volume: 97, Issue:26 Topics: Amino Acid Sequence; Animals; Aspartic Acid; Bacteriorhodopsins; Binding Sites; Cattle; Cell Line; Conserved Sequence; Extracellular Space; Glutamic Acid; Humans; Models, Molecular; Molecular Sequence Data; Mutagenesis, Site-Directed; Protein Structure, Secondary; Retinal Pigments; Rhodopsin; Spectrophotometry	2000
Activation of arrestin: requirement of phosphorylation as the negative charge on residues in synthetic peptides from the carboxyl-terminal region of rhodopsin. Investigative ophthalmology & visual science, 2001, Volume: 42, Issue:7 Topics: 3',5'-Cyclic-GMP Phosphodiesterases; Animals; Arrestin; Aspartic Acid; Cattle; Cyclic GMP; Cysteic Acid; Electrophoresis, Polyacrylamide Gel; Glutamic Acid; Peptide Fragments; Phosphorylation; Rhodopsin; Rod Cell Outer Segment; Sulfhydryl Compounds; Vision, Ocular	2001
Engineering a functional blue-wavelength-shifted rhodopsin mutant. Biochemistry, 2001, Jun-19, Volume: 40, Issue:24 Topics: Alanine; Amino Acid Sequence; Amino Acid Substitution; Animals; Aspartic Acid; Cattle; COS Cells; Glutamic Acid; Models, Molecular; Molecular Sequence Data; Mutagenesis, Site-Directed; Photochemistry; Retinaldehyde; Rhodopsin; Serine; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet; Thermodynamics; Threonine; Transducin	2001
A structural role for Asp83 in the photoactivation of rhodopsin. Biological chemistry, 2001, Volume: 382, Issue:8 Topics: Amino Acid Sequence; Aspartic Acid; GTP-Binding Proteins; Hydrogen Bonding; Molecular Sequence Data; Osmolar Concentration; Photochemistry; Point Mutation; Protein Conformation; Protein Folding; Rhodopsin; Spectroscopy, Fourier Transform Infrared	2001
Characterization of a G protein coupling "YL" motif of the human VPAC1 receptor, equivalent to the first two amino acids in the "DRY" motif of the rhodopsin family. Journal of molecular neuroscience : MN, 2001, Volume: 17, Issue:3 Topics: Amino Acid Motifs; Amino Acid Substitution; Arginine; Aspartic Acid; Cell Culture Techniques; Cyclic AMP; Guanosine 5'-O-(3-Thiotriphosphate); Heterotrimeric GTP-Binding Proteins; Humans; Leucine; Receptors, G-Protein-Coupled; Receptors, Gastrointestinal Hormone; Receptors, Vasoactive Intestinal Peptide; Receptors, Vasoactive Intestinal Polypeptide, Type I; Rhodopsin; Transfection; Tyrosine; Vasoactive Intestinal Peptide	2001
Design, synthesis and pharmacological evaluation of 5-hydroxytryptamine(1a) receptor ligands to explore the three-dimensional structure of the receptor. Molecular pharmacology, 2002, Volume: 62, Issue:1 Topics: Amino Acids; Animals; Asparagine; Aspartic Acid; Computer Simulation; Drug Design; In Vitro Techniques; Male; Membrane Proteins; Protein Structure, Secondary; Rats; Rats, Sprague-Dawley; Receptors, Serotonin; Receptors, Serotonin, 5-HT1; Rhodopsin; Rod Opsins; Serotonin Agents	2002
Proteorhodopsin is a light-driven proton pump with variable vectoriality. Journal of molecular biology, 2002, Aug-30, Volume: 321, Issue:5 Topics: Animals; Aspartic Acid; Cells, Cultured; Electric Conductivity; Escherichia coli; Hydrogen-Ion Concentration; Isomerism; Kinetics; Lasers; Light; Models, Biological; Models, Molecular; Photons; Proton Pumps; Rhodopsin; Rhodopsins, Microbial; Schiff Bases; Spectroscopy, Fourier Transform Infrared; Temperature; Xenopus	2002
An opsin mutant with increased thermal stability. Biochemistry, 2003, Feb-25, Volume: 42, Issue:7 Topics: Amino Acid Sequence; Animals; Asparagine; Aspartic Acid; Cattle; COS Cells; Cross-Linking Reagents; Cysteine; Disulfides; Dithiothreitol; Light; Molecular Sequence Data; Mutagenesis, Site-Directed; Protein Denaturation; Recombinant Proteins; Retinaldehyde; Rhodopsin; Thermodynamics; Transducin; Transfection	2003
Slow binding of retinal to rhodopsin mutants G90D and T94D. Biochemistry, 2003, Feb-25, Volume: 42, Issue:7 Topics: Alanine; Amino Acid Sequence; Animals; Aspartic Acid; Glutamic Acid; Glutamine; Glycine; Humans; Molecular Sequence Data; Mutagenesis, Insertional; Night Blindness; Protein Binding; Protein Denaturation; Retinaldehyde; Rhodopsin; Schiff Bases; Spectrophotometry, Ultraviolet; Threonine	2003
Proton transport by proteorhodopsin requires that the retinal Schiff base counterion Asp-97 be anionic. Biochemistry, 2003, Jun-03, Volume: 42, Issue:21 Topics: Aspartic Acid; Biological Transport; Escherichia coli; Glutamic Acid; Hydrogen-Ion Concentration; Ions; Kinetics; Mutation; Protons; Rhodopsin; Rhodopsins, Microbial; Schiff Bases; Time Factors	2003
Construction of a sequence motif characteristic of aminergic G protein-coupled receptors. Protein science : a publication of the Protein Society, 2003, Volume: 12, Issue:7 Topics: Amino Acid Sequence; Aspartic Acid; Conserved Sequence; Models, Molecular; Molecular Sequence Data; Mutation; Peptides, Cyclic; Protein Conformation; Receptors, G-Protein-Coupled; Receptors, Histamine; Receptors, Histamine H4; Rhodopsin; Sequence Alignment; Tryptophan	2003
[STUDIES ON THE ACTION OF L-ASPARTATE IN THE RETINA ON THE REGENERATION OF VISUAL PURPLE. (1)]. Nihon ganka kiyo, 1963, Volume: 14 Topics: Animals; Anura; Aspartic Acid; Bufonidae; Magnesium; Pharmacology; Potassium; Regeneration; Research; Retina; Retinal Pigments; Rhodopsin	1963
[STUDIES ON THE ACTION OF L-ASPARTATE IN THE RETINA ON THE REGENERATION OF VISUAL PURPLE. (2)]. Nihon ganka kiyo, 1963, Volume: 14 Topics: Animals; Anura; Aspartic Acid; Bufonidae; Malonates; Pharmacology; Potassium; Regeneration; Research; Retina; Retinal Pigments; Rhodopsin	1963
Selectivity of retinal photoisomerization in proteorhodopsin is controlled by aspartic acid 227. Biochemistry, 2004, Feb-17, Volume: 43, Issue:6 Topics: Amino Acid Substitution; Asparagine; Aspartic Acid; Bacteriorhodopsins; Binding Sites; Darkness; Gammaproteobacteria; Hydrogen-Ion Concentration; Isomerism; Light; Retinaldehyde; Rhodopsin; Rhodopsins, Microbial; Solubility; Spectroscopy, Fourier Transform Infrared; Temperature	2004
Time-resolved photointermediate changes in rhodopsin glutamic acid 181 mutants. Biochemistry, 2004, Oct-05, Volume: 43, Issue:39 Topics: Amino Acid Substitution; Animals; Aspartic Acid; Cattle; COS Cells; Glutamic Acid; Glutamine; Mutagenesis, Site-Directed; Phenylalanine; Photolysis; Protons; Rhodopsin; Schiff Bases; Spectrophotometry	2004
An activation switch in the rhodopsin family of G protein-coupled receptors: the thyrotropin receptor. The Journal of biological chemistry, 2005, Apr-29, Volume: 280, Issue:17 Topics: Alanine; Amino Acid Motifs; Animals; Asparagine; Aspartic Acid; Binding Sites; Cattle; Cell Membrane; Cell Separation; COS Cells; Cyclic AMP; Dose-Response Relationship, Drug; Flow Cytometry; Hydrogen Bonding; Leucine; Models, Molecular; Mutagenesis, Site-Directed; Mutation; Plasmids; Protein Binding; Protein Conformation; Protein Structure, Tertiary; Receptors, G-Protein-Coupled; Receptors, Thyrotropin; Rhodopsin; Software; Static Electricity; Threonine; Transfection	2005
Weakened coupling of conserved arginine to the proteorhodopsin chromophore and its counterion implies structural differences from bacteriorhodopsin. Biochimica et biophysica acta, 2005, Jun-01, Volume: 1708, Issue:1 Topics: Arginine; Aspartic Acid; Bacteriorhodopsins; Hydrogen-Ion Concentration; Rhodopsin; Rhodopsins, Microbial; Schiff Bases; Spectrophotometry, Ultraviolet	2005
A three-dimensional pharmacophore model for 5-hydroxytryptamine6 (5-HT6) receptor antagonists. Journal of medicinal chemistry, 2005, Jun-30, Volume: 48, Issue:13 Topics: Animals; Asparagine; Aspartic Acid; Binding Sites; Cattle; Drug Design; Hydrogen Bonding; Models, Molecular; Protein Conformation; Receptors, Serotonin; Rhodopsin; Serine; Serotonin Antagonists	2005
Formation of a long-lived photoproduct with a deprotonated Schiff base in proteorhodopsin, and its enhancement by mutation of Asp227. Biochemistry, 2005, Aug-16, Volume: 44, Issue:32 Topics: Aspartic Acid; Half-Life; Hydrogen-Ion Concentration; Mutation, Missense; Photochemistry; Photons; Rhodopsin; Rhodopsins, Microbial; Schiff Bases; Ultraviolet Rays	2005
Molecular dynamics simulations of bovine rhodopsin: influence of protonation states and different membrane-mimicking environments. Journal of molecular modeling, 2005, Volume: 12, Issue:1 Topics: 1,2-Dipalmitoylphosphatidylcholine; Amino Acid Sequence; Animals; Aspartic Acid; Carbon Tetrachloride; Cattle; Cell Membrane; Computer Simulation; Glutamic Acid; Humans; Hydrogen Bonding; Models, Molecular; Molecular Sequence Data; Protein Structure, Tertiary; Protons; Rhodopsin; Software; Structural Homology, Protein; Water	2005
Structure, function, and wavelength selection in blue-absorbing proteorhodopsin. Biochemistry, 2006, Feb-14, Volume: 45, Issue:6 Topics: Amino Acid Sequence; Archaeal Proteins; Arginine; Aspartic Acid; Bacterial Chromatophores; Glutamic Acid; Glutamine; Hydrogen-Ion Concentration; Models, Molecular; Molecular Sequence Data; Retina; Rhodopsin; Rhodopsins, Microbial; Schiff Bases; Sensory Rhodopsins; Spectrophotometry; Static Electricity	2006
Conformational coupling between the cytoplasmic carboxylic acid and the retinal in a fungal light-driven proton pump. Biochemistry, 2006, Dec-26, Volume: 45, Issue:51 Topics: Amino Acid Substitution; Ascomycota; Asparagine; Aspartic Acid; Carboxylic Acids; Cytoplasm; Glutamic Acid; Lasers; Neurospora; Protein Conformation; Proton Pumps; Retinaldehyde; Rhodopsin	2006
Linkage between the intramembrane H-bond network around aspartic acid 83 and the cytosolic environment of helix 8 in photoactivated rhodopsin. Journal of molecular biology, 2007, Mar-02, Volume: 366, Issue:4 Topics: Aspartic Acid; Cystine; Cytosol; Fluorescein; Infrared Rays; Intracellular Membranes; Molecular Structure; Photochemistry; Protein Structure, Secondary; Protein Structure, Tertiary; Receptors, G-Protein-Coupled; Rhodopsin; Structure-Activity Relationship	2007
Constitutive excitation by Gly90Asp rhodopsin rescues rods from degeneration caused by elevated production of cGMP in the dark. The Journal of neuroscience : the official journal of the Society for Neuroscience, 2007, Aug-15, Volume: 27, Issue:33 Topics: Adaptation, Ocular; Animals; Aspartic Acid; Calcium; Cyclic GMP; Cysteine; Dark Adaptation; Disease Models, Animal; Electroretinography; Gene Expression Regulation; Glycine; Guanylate Cyclase-Activating Proteins; Mice; Mice, Transgenic; Microscopy, Electron, Transmission; Physical Stimulation; Retina; Retinal Degeneration; Retinal Rod Photoreceptor Cells; Rhodopsin; Tyrosine	2007
Protonation state of Glu142 differs in the green- and blue-absorbing variants of proteorhodopsin. Biochemistry, 2008, Mar-18, Volume: 47, Issue:11 Topics: Aspartic Acid; Escherichia coli; Glutamic Acid; Hydrogen-Ion Concentration; Models, Molecular; Photochemistry; Protein Structure, Secondary; Protons; Rhodopsin; Rhodopsins, Microbial; Spectrophotometry; Spectroscopy, Fourier Transform Infrared	2008
Night blindness and the mechanism of constitutive signaling of mutant G90D rhodopsin. The Journal of neuroscience : the official journal of the Society for Neuroscience, 2008, Nov-05, Volume: 28, Issue:45 Topics: Animals; Aspartic Acid; Calcium; Carrier Proteins; cis-trans-Isomerases; Dark Adaptation; Disease Models, Animal; Dose-Response Relationship, Radiation; Eye Proteins; Glycine; Kinetics; Light Signal Transduction; Membrane Potentials; Mice; Mice, Transgenic; Mutation; Night Blindness; Opsins; Photic Stimulation; Retinal Rod Photoreceptor Cells; Retinaldehyde; Rhodopsin; Spectrum Analysis; Time Factors	2008
Phenotype-genotype correlations in autosomal dominant retinitis pigmentosa caused by RHO, D190N. Current eye research, 2008, Volume: 33, Issue:11 Topics: Adolescent; Adult; Asparagine; Aspartic Acid; Child; Electroretinography; Fluorescence; Fundus Oculi; Genes, Dominant; Genotype; Humans; Male; Middle Aged; Mutation; Pedigree; Phenotype; Retinal Pigment Epithelium; Retinitis Pigmentosa; Rhodopsin; Visual Acuity; Visual Fields; Young Adult	2008
His75-Asp97 cluster in green proteorhodopsin. Journal of the American Chemical Society, 2011, Mar-30, Volume: 133, Issue:12 Topics: Aspartic Acid; Color; Histidine; Hydrogen Bonding; Hydrogen-Ion Concentration; Magnetic Resonance Spectroscopy; Models, Molecular; Reference Standards; Rhodopsin; Rhodopsins, Microbial	2011
Critical role of Asp227 in the photocycle of proteorhodopsin. Biochemistry, 2012, Jul-17, Volume: 51, Issue:28 Topics: Aspartic Acid; Deuterium Oxide; Hydrogen-Ion Concentration; Isomerism; Models, Molecular; Mutation; Photochemical Processes; Retinaldehyde; Rhodopsin; Rhodopsins, Microbial; Spectrophotometry; Water	2012
Photocycle and vectorial proton transfer in a rhodopsin from the eukaryote Oxyrrhis marina. Biochemistry, 2013, Apr-23, Volume: 52, Issue:16 Topics: Aquatic Organisms; Aspartic Acid; Dinoflagellida; Histidine; Hydrogen-Ion Concentration; Light; Mutagenesis, Site-Directed; Nuclear Magnetic Resonance, Biomolecular; Photochemistry; Protons; Rhodopsin; Schiff Bases	2013
Retinal chromophore structure and Schiff base interactions in red-shifted channelrhodopsin-1 from Chlamydomonas augustae. Biochemistry, 2014, Jun-24, Volume: 53, Issue:24 Topics: Anions; Aspartic Acid; Chlamydomonas; Glutamic Acid; Hydrogen Bonding; Hydrogen-Ion Concentration; Rhodopsin; Rhodopsins, Microbial; Schiff Bases; Sensory Rhodopsins; Spectrum Analysis, Raman	2014
Analysis of Conserved Glutamate and Aspartate Residues in Drosophila Rhodopsin 1 and Their Influence on Spectral Tuning. The Journal of biological chemistry, 2015, Sep-04, Volume: 290, Issue:36 Topics: Animals; Aspartic Acid; Blotting, Western; Conserved Sequence; Drosophila melanogaster; Drosophila Proteins; Glutamic Acid; Microspectrophotometry; Mutation; Opsins; Phylogeny; Protein Structure, Secondary; Retinal Degeneration; Rhodopsin	2015
Bacteriorhodopsin-like channelrhodopsins: Alternative mechanism for control of cation conductance. Proceedings of the National Academy of Sciences of the United States of America, 2017, 11-07, Volume: 114, Issue:45 Topics: Aspartic Acid; Bacteriorhodopsins; Cations; Cell Line; Channelrhodopsins; Cryptophyta; Cytoplasm; HEK293 Cells; Humans; Ion Transport; Proton Pumps; Protons; Retinoids; Rhodopsin; Schiff Bases	2017
Interhelical interactions between D92 and C218 in the cytoplasmic domain regulate proton uptake upon N-decay in the proton transport of Acetabularia rhodopsin II. Journal of photochemistry and photobiology. B, Biology, 2018, Volume: 183 Topics: Acetabularia; Aspartic Acid; Cysteine; Hydrogen Bonding; Hydrogen-Ion Concentration; Kinetics; Light; Photolysis; Protein Domains; Protons; Rhodopsin; Spectrophotometry	2018
Molecular interactions and mutational impact upon rhodopsin (G90→D90) for hindering dark adaptation of eye: A comparative structural level outlook for signaling mechanism in night blindness. Mutation research, 2019, Volume: 814 Topics: Amino Acid Substitution; Aspartic Acid; Crystallography, X-Ray; Dark Adaptation; DNA Mutational Analysis; Glycine; Humans; Models, Molecular; Night Blindness; Point Mutation; Protein Binding; Protein Interaction Domains and Motifs; Protein Interaction Maps; Protein Structure, Secondary; Rhodopsin; Signal Transduction; Structure-Activity Relationship	2019