alanine and azidohomoalanine

alanine has been researched along with azidohomoalanine in 71 studies

Research

Studies (71)

Timeframe	Studies, this research(%)	All Research%
pre-1990	0 (0.00)	18.7374
1990's	0 (0.00)	18.2507
2000's	9 (12.68)	29.6817
2010's	54 (76.06)	24.3611
2020's	8 (11.27)	2.80

Authors

Authors	Studies
Link, AJ; Tirrell, DA	1
Back, JW; David, O; de Jong, L; de Koning, LJ; de Koster, CG; Kasper, PT; Kramer, G; Masson, G; van Maarseveen, JH	1
Dieterich, DC; Graumann, J; Lee, JJ; Link, AJ; Schuman, EM; Tirrell, DA	1
Link, AJ; Tirrell, DA; Vink, MK	2
Grabstein, K; Johnson, RS; Tirrell, DA; Wang, A; Winblade Nairn, N	1
Morimoto, J; Murakami, H; Sako, Y; Suga, H	1
Back, J; de Jong, L; de Koning, LJ; de Koster, CG; Dekker, HL; Hellingwerf, KJ; Kramer, G; Nessen, MA; Sprenger, RR; van Maarseveen, JH	1
Back, J; Baskin, JM; Bertozzi, CR; de Jong, L; de Koning, LJ; de Koster, CG; Hiemstra, H; Kramer, G; Nessen, MA; Smeenk, LE; van Maarseveen, JH	1
Deal, RB; Henikoff, JG; Henikoff, S	1
Dieterich, DC; Gouzer, G; Hodas, JJ; Ngo, JT; Schuman, EM; Shadrin, IY; Tirrell, DA; Triller, A	1
Deal, RB; Henikoff, S	1
Back, J; de Jong, L; de Koster, CG; de Mattos, MJ; Kramer, G; Nessen, MA; Roseboom, W; Speijer, D; Sprenger, RR	1
Banerjee, PS; Carrico, I; Chung, J; Dyer, RB; Nagarajan, S; Raleigh, DP; Taskent-Sezgin, H	1
Burnham, DR; Chiu, DT; Jin, Y; Schneider, T; Smith, PB; Wu, C	1
Drewe, WC; Roth, S; Thomas, NR	1
Garner, AL; Janda, KD; Kaufmann, GF; Kim, SK; Kravchenko, VV; Lowery, CA; Mayorov, AV; Park, J; Struss, AK; Yu, J; Zhu, J	1
David, L; Simon, RP; Zhou, A	1
Patel, KG; Swartz, JR	1
de Jong, L; de Koster, CG; Kasper, PT; Kramer, G	1
Banerjee, PS; Carrico, IS	1
Plückthun, A; Simon, M; Zangemeister-Wittke, U	1
Choi, KY; Ezzatti, P; Lippert, DN; Mookherjee, N	1
Budisa, N; Lee, SG; Paik, HJ; Raghunathan, G; Sokalingam, S; Soundrarajan, N; Yoo, TH	1
Bloem, R; Buchli, B; Hamm, P; Jelesarov, I; Koziol, K; Samatanga, B; Waldauer, SA; Walser, R	1
Agris, PF; Fanning, KD; Francis, SP; Harris, KA; Katz, J; Lacy, M; Nicholas, BD; Pagana, J; Shin, JB	1
Eichelbaum, K; Krijgsveld, J	1
Bredenbeck, J; Müller-Werkmeister, HM	1
Biava, H; Budisa, N; Contestabile, R; di Salvo, ML; Ma, Y	1
Banister, S; Chew, YL; Götz, J; Kassiou, M; Lam, H; Liang, V; Nicholas, HR; Song, X; Ullrich, M; Zaw, T	1
Bian, F; David, L; Frankel, M; Hall, CL; Li, Y; Simon, RP; Wainwright, J; Zhou, A	1
Babin, BM; Hatzenpichler, R; Orphan, VJ; Scheller, S; Tavormina, PL; Tirrell, DA	1
Lin, Q; Ng, S; Shen, HM; Wang, J; Zhang, J	1
Banister, S; Berber, S; Chew, YL; Götz, J; Kassiou, M; Lam, H; Liang, V; Nicholas, HR; Song, X; Ullrich, M; Zaw, T	1
Ballikaya, S; Gebert, J; Kopitz, J; Lee, J; Schnölzer, M; Warnken, U	1
Bowling, H; Chao, MV; Hom, N; Kirshenbaum, K; Klann, E; Neubert, TA; Zhang, G	1
Antileo, ER; Dieterich, DC; Landgraf, P; Schuman, EM	1
Chang, YC; Chen, EC; Chung, HW; Fang, W; Hsu, WL; Lee, YT; Wu, CY; Wu, HI	1
Hellberg, K; Liu, C; Ma, Y; Martínez-Bartolomé, S; McClatchy, DB; Shaw, RJ; Stein, BD; Vasquez, D; Yates, JR	1
Budisa, N; Haag, R; Ma, Y; Thota, BN	1
Dieterich, DC; Freitag, CE; Landgraf, P; Müller, A; Stellmacher, A	1
Bhuvanagiri, M; Hauer, C; Hentze, MW; Krijgsveld, J; Kulozik, AE; Leicht, S; Neu-Yilik, G; Sieber, J	1
Brynildsen, MP; Henry, TC	1
Aschrafi, A; Gioio, A; Kaplan, BB; Kos, A; Martens, GJ; Wanke, KA	1
Bao, F; Koh, PL; Lee, YM; Lin, Q; Ng, S; Shen, HM; Wang, J; Zhang, J	1
Chai, Q; Dutch, RE; Wang, Z; Webb, SR; Wei, Y	1
Calve, S; Kinzer-Ursem, TL; Ocken, AR; Witten, AJ	1
Daub, E; Honek, JF; Urquhart, T	1
Chen, W; Donnelly, N; Hou, J; Marsh, JA; McShane, E; Selbach, M; Sin, C; Storchova, Z; Valleriani, A; Wang, X; Wells, JN; Zauber, H	1
Chen, X; Li, Z; Liu, W; Qin, K; Sun, Y; Zhou, W; Zhu, Y	1
Sheng, L; Wang, J; Zhang, S; Zhang, X; Zhao, H	1
Mauck, RL; McLeod, CM	1
Hua, ZC; Lee, YM; Lin, Q; Ng, S; Shen, HM; Shi, Y; Wang, J; Zhang, J	1
Bailey-Serres, J; Glenn, WS; Hess, S; Ho, SH; Moradian, A; Stone, SE; Sweredoski, MJ; Tirrell, DA	1
Lee, YM; Lim, TK; Lin, Q; Shen, HM; Wang, J; Zhang, J	1
Itzhaki, LS; Ley, SV; Serrano, JC; Sipthorp, J; Xu, W	1
Barkallah, S; Ma, Y; McClatchy, DB; Wood, WW; Yates, JR	1
Bredenbeck, J; Eberl, KB; Kudlinzki, D; Lehner, F; Müller-Werkmeister, HM; Richter, C; Schwalbe, H; Silvers, R	1
Huang, LL; Liu, K; Xie, HY; Xu, J; Zhang, Q; Zhao, D; Zhu, H	1
Budisa, N; Di Salvo, ML; Ma, Y	1
Ma, Y; Yates, JR	1
Bernhard, E; Bethi, M; Borra, V; Murakami, K; Nakamura, T; Salem, ESB; Takahashi, T	1
Brandl, F; Jones, AT; Lorenzer, C; Merten, H; Plückthun, A; Sayers, EJ; Streußnig, S; Tot, E; Watson, P; Winkler, AM; Winkler, J; Zangemeister-Wittke, U	1
Gao, Y; Lavallée-Adam, M; Martínez-Bartolomé, S; McClatchy, DB; Yates, JR	1
Ghazanfar, S; Han, X; Hou, Z; Liu, H; Wang, Z; Yang, J	1
Meuwly, M; Salehi, SM	1
Duncan, O; Fenske, R; Millar, AH; Tivendale, ND	1
Jeon, T; Kang, C; Kim, J; Kim, MS; Lee, Y; Roh, K	1
Cai, Z; Gygi, SP; Harry, BL; Huttlin, EL; Li, J; Mitchell, DC; Paulo, JA; Shen, N; Vaites, LP	1
Arnold-Schild, D; Bopp, T; Chen, Y; Distler, U; Kirschner, F; Klein, M; Kücük, C; Leps, C; Ludt, A; Marini, F; Michna, T; Rajalingam, K; Riegel, K; Schild, H; Sielaff, M; Stein, L; Tenzer, S; Łącki, MK	1
Jecmen, T; Sulc, M; Tuzhilkin, R	1

Reviews

1 review(s) available for alanine and azidohomoalanine

Article	Year
Proteomics and pulse azidohomoalanine labeling of newly synthesized proteins: what are the potential applications? Expert review of proteomics, 2018, Volume: 15, Issue:7 Topics: Alanine; Animals; Humans; Immunity; Isotope Labeling; Microbiota; Protein Biosynthesis; Proteomics; Proteostasis	2018

Trials

1 trial(s) available for alanine and azidohomoalanine

Article	Year
Nascent proteomes in peripheral blood mononuclear cells as a novel source for biomarker discovery in human stroke. Stroke, 2014, Volume: 45, Issue:4 Topics: Alanine; Biomarkers; Cells, Cultured; Cluster Analysis; Female; Humans; Leukocytes, Mononuclear; Male; Mass Spectrometry; Pilot Projects; Proteome; Proteomics; Staining and Labeling; Stroke	2014

Other Studies

69 other study(ies) available for alanine and azidohomoalanine

Article	Year
Cell surface labeling of Escherichia coli via copper(I)-catalyzed [3+2] cycloaddition. Journal of the American Chemical Society, 2003, Sep-17, Volume: 125, Issue:37 Topics: Alanine; Catalysis; Copper; Escherichia coli; Gene Expression; Membrane Proteins; Models, Chemical; Molecular Structure; Mutagenesis, Site-Directed; Mutation; Porins; Staining and Labeling	2003
Mild and chemoselective peptide-bond cleavage of peptides and proteins at azido homoalanine. Angewandte Chemie (International ed. in English), 2005, Dec-09, Volume: 44, Issue:48 Topics: Alanine; Amino Acid Sequence; Azides; Molecular Sequence Data; Molecular Structure; Peptides; Phosphines; Proteins	2005
Labeling, detection and identification of newly synthesized proteomes with bioorthogonal non-canonical amino-acid tagging. Nature protocols, 2007, Volume: 2, Issue:3 Topics: Affinity Labels; Alanine; Amino Acids; Animals; Azides; Gene Expression Profiling; Mice; Proteins; Proteomics	2007
Preparation of the functionalizable methionine surrogate azidohomoalanine via copper-catalyzed diazo transfer. Nature protocols, 2007, Volume: 2, Issue:8 Topics: Alanine; Biochemistry; Butyrates; Catalysis; Chromatography, Ion Exchange; Copper; Crystallization; Furans; Methionine; Sulfonamides	2007
Synthesis of the functionalizable methionine surrogate azidohomoalanine using Boc-homoserine as precursor. Nature protocols, 2007, Volume: 2, Issue:8 Topics: Alanine; Biochemistry; Chromatography, Ion Exchange; Crystallization; Formic Acid Esters; Homoserine	2007
Processing of N-terminal unnatural amino acids in recombinant human interferon-beta in Escherichia coli. Chembiochem : a European journal of chemical biology, 2008, Jan-25, Volume: 9, Issue:2 Topics: Alanine; Amino Acid Sequence; Amino Acid Substitution; Amino Acids; Base Sequence; Binding Sites; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Glutamic Acid; Glycine; Histidine; Humans; Interferon Type I; Molecular Sequence Data; Protein Engineering; Recombinant Proteins; Serine; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Substrate Specificity	2008
Ribosomal synthesis of bicyclic peptides via two orthogonal inter-side-chain reactions. Journal of the American Chemical Society, 2008, Jun-11, Volume: 130, Issue:23 Topics: Alanine; Alkynes; Amino Acid Sequence; Amino Acids; Aminobutyrates; Codon; Cysteine; Glycine; Peptides, Cyclic; Ribosomes; RNA, Messenger; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Templates, Genetic	2008
Identification and quantitation of newly synthesized proteins in Escherichia coli by enrichment of azidohomoalanine-labeled peptides with diagonal chromatography. Molecular & cellular proteomics : MCP, 2009, Volume: 8, Issue:7 Topics: Alanine; Chromatography; Chromatography, Liquid; Escherichia coli; Escherichia coli Proteins; Methionine; Molecular Structure; Peptides; Tandem Mass Spectrometry	2009
Selective enrichment of azide-containing peptides from complex mixtures. Journal of proteome research, 2009, Volume: 8, Issue:7 Topics: Alanine; Amino Acid Sequence; Azides; Cations; Chromatography, Ion Exchange; Cross-Linking Reagents; Cytochromes c; Glutarates; Kinetics; Mass Spectrometry; Methionine; Molecular Sequence Data; Peptides; Proteome; Proteomics	2009
Genome-wide kinetics of nucleosome turnover determined by metabolic labeling of histones. Science (New York, N.Y.), 2010, May-28, Volume: 328, Issue:5982 Topics: Alanine; Animals; Cell Line; Drosophila melanogaster; Drosophila Proteins; Genome, Insect; Histones; Kinetics; Methionine; Molecular Probe Techniques; Nucleosomes; Oligonucleotide Array Sequence Analysis	2010
In situ visualization and dynamics of newly synthesized proteins in rat hippocampal neurons. Nature neuroscience, 2010, Volume: 13, Issue:7 Topics: Alanine; Alkynes; Amino Acids; Animals; Cells, Cultured; Fluorescent Dyes; Glycine; Hippocampus; Immunohistochemistry; Microdialysis; Nerve Tissue Proteins; Neurons; Protein Biosynthesis; Proteomics; Quantum Dots; Rats; Rats, Sprague-Dawley; Staining and Labeling	2010
Catching a glimpse of nucleosome dynamics. Cell cycle (Georgetown, Tex.), 2010, Sep-01, Volume: 9, Issue:17 Topics: Alanine; Animals; DNA; Drosophila; Histones; Nucleosomes; Polycomb-Group Proteins; Repressor Proteins	2010
Proteome-wide alterations in Escherichia coli translation rates upon anaerobiosis. Molecular & cellular proteomics : MCP, 2010, Volume: 9, Issue:11 Topics: Alanine; Anaerobiosis; Escherichia coli; Escherichia coli Proteins; Gene Expression Regulation, Bacterial; Protein Biosynthesis; Proteome	2010
Azidohomoalanine: a conformationally sensitive IR probe of protein folding, protein structure, and electrostatics. Angewandte Chemie (International ed. in English), 2010, Oct-04, Volume: 49, Issue:41 Topics: Alanine; Models, Molecular; Protein Conformation; Protein Folding; Protein Structure, Tertiary; Proteins; Ribosomal Proteins; Spectrophotometry, Infrared; Static Electricity	2010
Ultrabright and bioorthogonal labeling of cellular targets using semiconducting polymer dots and click chemistry. Angewandte Chemie (International ed. in English), 2010, Dec-03, Volume: 49, Issue:49 Topics: 3T3 Cells; Alanine; Animals; Click Chemistry; Fluorenes; Fluorescent Dyes; Humans; Mice; Molecular Structure; Particle Size; Polymers; Proteins; Semiconductors; Staining and Labeling; Surface Properties; Tumor Cells, Cultured	2010
A concise and scalable route to L-azidohomoalanine. Nature protocols, 2010, Volume: 5, Issue:12 Topics: Alanine; Aspartic Acid; Molecular Structure; Proteins	2010
Synthesis of 'clickable' acylhomoserine lactone quorum sensing probes: unanticipated effects on mammalian cell activation. Bioorganic & medicinal chemistry letters, 2011, May-01, Volume: 21, Issue:9 Topics: Alanine; Animals; Cells; Click Chemistry; Homoserine; Humans; Lactones; Molecular Structure; Pseudomonas; Quorum Sensing	2011
Nascent proteomes of ischemic-injured and ischemic-tolerant neuronal cells. International journal of computational biology and drug design, 2011, Volume: 4, Issue:1 Topics: Alanine; Animals; Brain; Brain Ischemia; Cells, Cultured; Click Chemistry; Down-Regulation; Gene Expression Profiling; Mice; Neurons; Proteome; Proteomics; Up-Regulation	2011
Surface functionalization of virus-like particles by direct conjugation using azide-alkyne click chemistry. Bioconjugate chemistry, 2011, Mar-16, Volume: 22, Issue:3 Topics: Alanine; Alkynes; Animals; Antigens; Cell Line; Cell-Free System; Click Chemistry; CpG Islands; DNA; Glycine; Granulocyte-Macrophage Colony-Stimulating Factor; Immunoglobulin Idiotypes; Lymphoma, B-Cell; Mice; Polyethylene Glycols; Substrate Specificity; Surface Properties; Vaccines, Virus-Like Particle	2011
Quantitation of newly synthesized proteins by pulse labeling with azidohomoalanine. Methods in molecular biology (Clifton, N.J.), 2011, Volume: 753 Topics: Alanine; Chromatography; Chromatography, Liquid; Escherichia coli; Humans; Molecular Structure; Protein Biosynthesis; Proteins; Proteomics; Software; Staining and Labeling; Tandem Mass Spectrometry	2011
Chemoselective modification of viral proteins bearing metabolically introduced "clickable" amino acids and sugars. Methods in molecular biology (Clifton, N.J.), 2011, Volume: 751 Topics: Adenoviridae; Alanine; Alkynes; Amino Acids; Animals; Azides; Carbohydrate Metabolism; Carbohydrates; Catalysis; Click Chemistry; Copper; Electrophoresis, Polyacrylamide Gel; Rhodamines; Staining and Labeling; Substrate Specificity; Viral Proteins	2011
Facile double-functionalization of designed ankyrin repeat proteins using click and thiol chemistries. Bioconjugate chemistry, 2012, Feb-15, Volume: 23, Issue:2 Topics: Alanine; Ankyrin Repeat; Cell Adhesion Molecules; Click Chemistry; Epithelial Cells; Fluorescent Dyes; Humans; Hydrolysis; Kinetics; Models, Molecular; Molecular Structure; Polyethylene Glycols; Proteins; Sulfhydryl Compounds; Tumor Cells, Cultured	2012
Defining TNF-α and IL-1β induced nascent proteins: combining bio-orthogonal non-canonical amino acid tagging and proteomics. Journal of immunological methods, 2012, Aug-31, Volume: 382, Issue:1-2 Topics: Alanine; Cell Line; Humans; Interleukin-1beta; Mass Spectrometry; Membrane Transport Proteins; Monocytes; Proteome; Proteomics; Tumor Necrosis Factor-alpha	2012
Conjugation of proteins by installing BIO-orthogonally reactive groups at their N-termini. PloS one, 2012, Volume: 7, Issue:10 Topics: Alanine; Alkynes; Click Chemistry; Glycine; Green Fluorescent Proteins; Methionine; Proteins	2012
Ligand binding studied by 2D IR spectroscopy using the azidohomoalanine label. The journal of physical chemistry. B, 2012, Nov-26, Volume: 116, Issue:46 Topics: Alanine; Ligands; Models, Molecular; Spectrophotometry, Infrared; Staining and Labeling	2012
A novel role of cytosolic protein synthesis inhibition in aminoglycoside ototoxicity. The Journal of neuroscience : the official journal of the Society for Neuroscience, 2013, Feb-13, Volume: 33, Issue:7 Topics: Alanine; Alkynes; Aminoglycosides; Animals; Anti-Bacterial Agents; Apoptosis; Blotting, Western; Cell Count; Chick Embryo; Cytosol; Ear Diseases; Enzyme Activation; Evoked Potentials, Auditory, Brain Stem; Glycine; Hair Cells, Auditory; Immunohistochemistry; JNK Mitogen-Activated Protein Kinases; Mice; Mice, Inbred CBA; Niacinamide; Organ Culture Techniques; Phenylurea Compounds; Protein Kinase Inhibitors; Protein Synthesis Inhibitors; RNA, Ribosomal; Sorafenib	2013
Rapid temporal dynamics of transcription, protein synthesis, and secretion during macrophage activation. Molecular & cellular proteomics : MCP, 2014, Volume: 13, Issue:3 Topics: Alanine; Animals; Cell Line; Cell Membrane; Databases, Protein; Gene Expression Regulation; Isotope Labeling; Lipopolysaccharides; Macrophage Activation; Macrophages; Mice; Protein Biosynthesis; Proteolysis; Proteome; Proteomics; RNA, Messenger; Signal Transduction; Time Factors; Transcription Factors; Transcription, Genetic; Transcriptome	2014
A donor-acceptor pair for the real time study of vibrational energy transfer in proteins. Physical chemistry chemical physics : PCCP, 2014, Feb-21, Volume: 16, Issue:7 Topics: Absorption; Alanine; Azulenes; Energy Transfer; Oligopeptides; Proteins; Vibration	2014
Coupling bioorthogonal chemistries with artificial metabolism: intracellular biosynthesis of azidohomoalanine and its incorporation into recombinant proteins. Molecules (Basel, Switzerland), 2014, Jan-15, Volume: 19, Issue:1 Topics: Alanine; Bacterial Proteins; Click Chemistry; Escherichia coli; Fermentation; Genetic Engineering; Metabolic Networks and Pathways; Protein Processing, Post-Translational; Recombinant Proteins; Spectrometry, Mass, Electrospray Ionization	2014
Altered proteostasis in aging and heat shock response in C. elegans revealed by analysis of the global and de novo synthesized proteome. Cellular and molecular life sciences : CMLS, 2014, Volume: 71, Issue:17 Topics: Aging; Alanine; Animals; Blotting, Western; Caenorhabditis elegans; Caenorhabditis elegans Proteins; Click Chemistry; Forecasting; Gene Expression Regulation; Genes, Helminth; Heat-Shock Response; Hot Temperature; Mass Spectrometry; Microscopy, Fluorescence; Protein Folding; Proteome; Proteostasis Deficiencies	2014
In situ visualization of newly synthesized proteins in environmental microbes using amino acid tagging and click chemistry. Environmental microbiology, 2014, Volume: 16, Issue:8 Topics: Alanine; Alkynes; Archaea; Archaeal Proteins; Azides; Bacteria; Bacterial Proteins; Biofilms; Click Chemistry; Fresh Water; Geologic Sediments; Humans; In Situ Hybridization, Fluorescence; Methionine; Microscopy, Fluorescence; Mouth; Staining and Labeling	2014
Development of a novel method for quantification of autophagic protein degradation by AHA labeling. Autophagy, 2014, Volume: 10, Issue:5 Topics: Alanine; Animals; Autophagy; Biological Assay; Cell Survival; Cells, Cultured; Flow Cytometry; Fluorescent Dyes; Hep G2 Cells; Humans; Mice; Proteolysis; Staining and Labeling	2014
Bio-orthogonal labeling as a tool to visualize and identify newly synthesized proteins in Caenorhabditis elegans. Nature protocols, 2014, Volume: 9, Issue:9 Topics: Alanine; Amino Acids; Animals; Blotting, Western; Caenorhabditis elegans Proteins; Chemistry Techniques, Analytical; Click Chemistry; Fluorescent Antibody Technique; Mass Spectrometry; Staining and Labeling	2014
De Novo proteome analysis of genetically modified tumor cells by a metabolic labeling/azide-alkyne cycloaddition approach. Molecular & cellular proteomics : MCP, 2014, Volume: 13, Issue:12 Topics: Activin Receptors, Type II; Alanine; Alkynes; Apoptosis; Apoptosis Regulatory Proteins; Azides; Biotin; Click Chemistry; Cycloaddition Reaction; Doxycycline; Gene Expression Profiling; Gene Expression Regulation, Neoplastic; Genetic Complementation Test; HCT116 Cells; Humans; Molecular Sequence Annotation; Proteome; Recombinases; Signal Transduction; Staining and Labeling; Streptavidin	2014
In-depth quantitative proteomic analysis of de novo protein synthesis induced by brain-derived neurotrophic factor. Journal of proteome research, 2014, Dec-05, Volume: 13, Issue:12 Topics: Alanine; Brain-Derived Neurotrophic Factor; Chromatography, Liquid; HEK293 Cells; Humans; Mass Spectrometry; Protein Biosynthesis; Proteome; Proteomics; Reproducibility of Results	2014
BONCAT: metabolic labeling, click chemistry, and affinity purification of newly synthesized proteomes. Methods in molecular biology (Clifton, N.J.), 2015, Volume: 1266 Topics: Alanine; Chromatography, Affinity; Click Chemistry; Cycloaddition Reaction; HEK293 Cells; Humans; Proteome; Staining and Labeling	2015
Glutamate Stimulates Local Protein Synthesis in the Axons of Rat Cortical Neurons by Activating α-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid (AMPA) Receptors and Metabotropic Glutamate Receptors. The Journal of biological chemistry, 2015, Aug-21, Volume: 290, Issue:34 Topics: Alanine; alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid; Animals; Axons; Brain-Derived Neurotrophic Factor; Calcium Channels; Calcium Signaling; Embryo, Mammalian; Gene Expression Regulation, Developmental; Glutamic Acid; Hippocampus; Kinetics; Primary Cell Culture; Protein Biosynthesis; Rats; Rats, Sprague-Dawley; Receptors, AMPA; Receptors, Metabotropic Glutamate; Synapses; TOR Serine-Threonine Kinases; TRPV Cation Channels	2015
Pulsed Azidohomoalanine Labeling in Mammals (PALM) Detects Changes in Liver-Specific LKB1 Knockout Mice. Journal of proteome research, 2015, Nov-06, Volume: 14, Issue:11 Topics: Alanine; Alkynes; AMP-Activated Protein Kinases; Animals; Azides; Biotin; Click Chemistry; Food, Formulated; Gene Expression; Integrases; Liver; Male; Methionine; Mice; Mice, Inbred C57BL; Mice, Knockout; Molecular Sequence Annotation; Protein Serine-Threonine Kinases; Proteome; Proteomics	2015
Dendronylation: Residue-specific chemoselective attachment of oligoglycerol dendrimers on proteins with noncanonical amino acids. Bioorganic & medicinal chemistry letters, 2015, Nov-15, Volume: 25, Issue:22 Topics: Alanine; Amino Acid Substitution; Azides; Bacillus; Bacterial Proteins; Cell Line; Click Chemistry; Dendrimers; Escherichia coli; Glycerol; Methionine; Recombinant Proteins	2015
Monitoring Astrocytic Proteome Dynamics by Cell Type-Specific Protein Labeling. PloS one, 2015, Volume: 10, Issue:12 Topics: Alanine; Animals; Astrocytes; Azides; Brain-Derived Neurotrophic Factor; Coculture Techniques; Green Fluorescent Proteins; HEK293 Cells; Humans; Methionine-tRNA Ligase; Neuroglia; Norleucine; Protein Biosynthesis; Proteins; Proteome; Proteomics; Rats, Wistar	2015
Proteomic Analysis Reveals Branch-specific Regulation of the Unfolded Protein Response by Nonsense-mediated mRNA Decay. Molecular & cellular proteomics : MCP, 2016, Volume: 15, Issue:5 Topics: Alanine; Dithiothreitol; Endoplasmic Reticulum Stress; Gene Regulatory Networks; HeLa Cells; Humans; Isotope Labeling; Liquid-Liquid Extraction; Nonsense Mediated mRNA Decay; Proteomics; Tandem Mass Spectrometry; Unfolded Protein Response	2016
Quantifying Current Events Identifies a Novel Endurance Regulator. Trends in microbiology, 2016, Volume: 24, Issue:5 Topics: Alanine; Amino Acids; Bacteria; Bacterial Proteins; Biofilms; Microbiological Techniques; Proteome; Pseudomonas aeruginosa	2016
Monitoring mRNA Translation in Neuronal Processes Using Fluorescent Non-Canonical Amino Acid Tagging. The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society, 2016, Volume: 64, Issue:5 Topics: Alanine; Alkynes; Amino Acids; Animals; Axons; Azides; Cerebral Cortex; Click Chemistry; Dendrites; Disks Large Homolog 4 Protein; Embryo, Mammalian; Fluorescent Dyes; Glycine; Intracellular Signaling Peptides and Proteins; Lab-On-A-Chip Devices; Membrane Proteins; Neurons; Primary Cell Culture; Protein Biosynthesis; Rats, Wistar; RNA, Messenger; Triazoles	2016
Quantitative chemical proteomics profiling of de novo protein synthesis during starvation-mediated autophagy. Autophagy, 2016, 10-02, Volume: 12, Issue:10 Topics: Alanine; Autophagy; Gene Ontology; HeLa Cells; Humans; Protein Biosynthesis; Proteomics; Reproducibility of Results; Signal Transduction; Staining and Labeling; Transcription, Genetic	2016
Study of the degradation of a multidrug transporter using a non-radioactive pulse chase method. Analytical and bioanalytical chemistry, 2016, Volume: 408, Issue:27 Topics: Alanine; Anti-Bacterial Agents; Bacterial Outer Membrane Proteins; Click Chemistry; Drug Resistance, Multiple, Bacterial; Escherichia coli; Escherichia coli Proteins; Gene Expression Regulation, Bacterial; Lipoproteins; Membrane Transport Proteins; Multidrug Resistance-Associated Proteins; Protein Binding; Protein Stability; Proteolysis; Staining and Labeling; Sulfur Radioisotopes	2016
Incorporation of non-canonical amino acids into the developing murine proteome. Scientific reports, 2016, 08-30, Volume: 6 Topics: Alanine; Alkynes; Amino Acids; Animals; Embryonic Development; Female; Glycine; Methionine; Mice; Pregnancy; Protein Biosynthesis; Proteome; Proteomics	2016
Bioorthogonal Modification of the Major Sheath Protein of Bacteriophage M13: Extending the Versatility of Bionanomaterial Scaffolds. Bioconjugate chemistry, 2016, Oct-19, Volume: 27, Issue:10 Topics: Alanine; Alkynes; Azides; Bacteriophage M13; Biotin; Cycloaddition Reaction; Fluorescent Dyes; Gold; Microscopy, Electron, Transmission; Nanoparticles; Rhodamines; Spectrometry, Mass, Electrospray Ionization; Viral Proteins	2016
Kinetic Analysis of Protein Stability Reveals Age-Dependent Degradation. Cell, 2016, Oct-20, Volume: 167, Issue:3 Topics: Alanine; Aneuploidy; Cell Line; Click Chemistry; Gene Amplification; Humans; Kinetics; Markov Chains; Proteasome Endopeptidase Complex; Protein Biosynthesis; Protein Stability; Proteins; Proteolysis; Proteome; Ubiquitin	2016
Nitrilase-Activatable Noncanonical Amino Acid Precursors for Cell-Selective Metabolic Labeling of Proteomes. ACS chemical biology, 2016, 12-16, Volume: 11, Issue:12 Topics: Alanine; Alkynes; Aminohydrolases; Animals; CHO Cells; Cricetulus; Glycine; HeLa Cells; Humans; Microscopy, Fluorescence; Proteome; Proteomics; Staining and Labeling	2016
Spatiotemporal fluorescence imaging of newly synthesized proteins in normal and cancerous cells with anticarcinogen modulation. Talanta, 2017, Jan-01, Volume: 162 Topics: A549 Cells; Alanine; Amino Acids; Anticarcinogenic Agents; Cell Line; Cell Line, Tumor; Click Chemistry; Fluorescence; Humans; MCF-7 Cells; Microscopy, Confocal; Models, Chemical; Protein Biosynthesis; Proteins	2017
High fidelity visualization of cell-to-cell variation and temporal dynamics in nascent extracellular matrix formation. Scientific reports, 2016, 12-12, Volume: 6 Topics: Alanine; Alkynes; Animals; Cattle; Cellular Microenvironment; Chondrocytes; Chondrogenesis; Extracellular Matrix; Extracellular Matrix Proteins; Fluorescent Antibody Technique, Direct; Fluorescent Dyes; Glycine; Mesenchymal Stem Cells; Microscopy, Confocal; Microscopy, Fluorescence; Quinolinium Compounds; Single-Cell Analysis	2016
Nonradioactive quantification of autophagic protein degradation with L-azidohomoalanine labeling. Nature protocols, 2017, Volume: 12, Issue:2 Topics: Alanine; Alkynes; Animals; Autophagy; Azides; Cell Line; Click Chemistry; Fluorescent Dyes; Mice; Proteins; Proteolysis; Staining and Labeling	2017
Bioorthogonal Noncanonical Amino Acid Tagging (BONCAT) Enables Time-Resolved Analysis of Protein Synthesis in Native Plant Tissue. Plant physiology, 2017, Volume: 173, Issue:3 Topics: Alanine; Arabidopsis; Arabidopsis Proteins; Azides; Chromatography, Liquid; Coloring Agents; Droughts; Hot Temperature; Immunoblotting; Light; Protein Biosynthesis; Reproducibility of Results; Seedlings; Sodium Chloride; Staining and Labeling; Stress, Physiological; Tandem Mass Spectrometry; Time Factors	2017
Proteomic Profiling of De Novo Protein Synthesis in Starvation-Induced Autophagy Using Bioorthogonal Noncanonical Amino Acid Tagging. Methods in enzymology, 2017, Volume: 588 Topics: Alanine; Amino Acids; Animals; Autophagy; Cell Culture Techniques; Chromatography, Ion Exchange; Click Chemistry; HeLa Cells; Humans; Protein Biosynthesis; Proteins; Proteomics; Spectrometry, Mass, Electrospray Ionization	2017
A New Methodology for Incorporating Chiral Linkers into Stapled Peptides. Chembiochem : a European journal of chemical biology, 2017, 06-19, Volume: 18, Issue:12 Topics: Alanine; Benzhydryl Compounds; Cell Line, Tumor; Cross-Linking Reagents; Humans; Peptide Library; Peptides; Protein Binding; Protein Stability; Protein Structure, Secondary; Proto-Oncogene Proteins c-mdm2; Solid-Phase Synthesis Techniques; Tumor Suppressor Protein p53	2017
HILAQ: A Novel Strategy for Newly Synthesized Protein Quantification. Journal of proteome research, 2017, 06-02, Volume: 16, Issue:6 Topics: Alanine; Cell Death; HEK293 Cells; Humans; Isotope Labeling; Neurodegenerative Diseases; Oxidative Stress; Protein Biosynthesis; Proteins; Proteome	2017
Impact of Azidohomoalanine Incorporation on Protein Structure and Ligand Binding. Chembiochem : a European journal of chemical biology, 2017, 12-05, Volume: 18, Issue:23 Topics: Alanine; Amino Acid Sequence; Circular Dichroism; Crystallography, X-Ray; Disks Large Homolog 4 Protein; Isotope Labeling; Ligands; Magnetic Resonance Spectroscopy; Mutagenesis; PDZ Domains; Peptides; Protein Binding; Protein Structure, Tertiary; Recombinant Proteins	2017
Integrating Two Efficient and Specific Bioorthogonal Ligation Reactions with Natural Metabolic Incorporation in One Cell for Virus Dual Labeling. Analytical chemistry, 2017, 11-07, Volume: 89, Issue:21 Topics: Alanine; Animals; Capsid; Chlorocebus aethiops; Click Chemistry; DNA, Viral; Fluorescent Dyes; Nucleic Acid Conformation; Staining and Labeling; Vaccinia virus; Vero Cells	2017
Self-Directed in Cell Production of Methionine Analogue Azidohomoalanine by Synthetic Metabolism and Its Incorporation into Model Proteins. Methods in molecular biology (Clifton, N.J.), 2018, Volume: 1728 Topics: Alanine; Amino Acids; Escherichia coli; Gene Expression; Metabolic Engineering; Protein Biosynthesis; Protein Engineering; Proteins; Recombinant Proteins	2018
Isolation of Primary Mouse Hepatocytes for Nascent Protein Synthesis Analysis by Non-radioactive L-azidohomoalanine Labeling Method. Journal of visualized experiments : JoVE, 2018, 10-23, Issue:140 Topics: Alanine; Animals; Cells, Cultured; Hepatocytes; Mice; Proteins	2018
Targeted delivery and endosomal cellular uptake of DARPin-siRNA bioconjugates: Influence of linker stability on gene silencing. European journal of pharmaceutics and biopharmaceutics : official journal of Arbeitsgemeinschaft fur Pharmazeutische Verfahrenstechnik e.V, 2019, Volume: 141 Topics: Alanine; Cell Line, Tumor; Click Chemistry; Endosomes; Epithelial Cell Adhesion Molecule; Gene Silencing; HeLa Cells; Humans; Maleimides; MCF-7 Cells; Muscle Proteins; Nuclear Proteins; RNA, Small Interfering; Sulfhydryl Compounds; Triazoles	2019
Quantitative analysis of global protein stability rates in tissues. Scientific reports, 2020, 09-29, Volume: 10, Issue:1 Topics: Age Factors; Alanine; Animals; Brain; Click Chemistry; Liver; Male; Mass Spectrometry; Mice; Organ Specificity; Protein Stability; Proteolysis; Proteome; Proteostasis	2020
A terminal alkyne and disulfide functionalized agarose resin specifically enriches azidohomoalanine labeled nascent proteins. Journal of chromatography. B, Analytical technologies in the biomedical and life sciences, 2021, Feb-15, Volume: 1165 Topics: Alanine; Alkynes; Chromatography, Liquid; Click Chemistry; Disulfides; HeLa Cells; Humans; Proteins; Proteome; Sepharose; Tandem Mass Spectrometry	2021
Site-selective dynamics of azidolysozyme. The Journal of chemical physics, 2021, Apr-28, Volume: 154, Issue:16 Topics: Alanine; Azides; Hydrophobic and Hydrophilic Interactions; Molecular Dynamics Simulation; Muramidase; Thermodynamics	2021
In vivo homopropargylglycine incorporation enables sampling, isolation and characterization of nascent proteins from Arabidopsis thaliana. The Plant journal : for cell and molecular biology, 2021, Volume: 107, Issue:4 Topics: Alanine; Alkynes; Arabidopsis; Arabidopsis Proteins; Gene Ontology; Glycine; Mass Spectrometry; Methionine; Nitrogen Isotopes; Plant Cells; Protein Processing, Post-Translational; Proteomics	2021
A flow-cytometry-based assessment of global protein synthesis in human senescent cells. STAR protocols, 2021, 09-17, Volume: 2, Issue:3 Topics: Alanine; Animals; Cell Line; Cellular Senescence; Click Chemistry; Fibroblasts; Flow Cytometry; HEK293 Cells; Humans; Mice; Protein Biosynthesis; Proteins	2021
Proteome-wide mapping of short-lived proteins in human cells. Molecular cell, 2021, 11-18, Volume: 81, Issue:22 Topics: Alanine; Cell Line; Cell Line, Tumor; Cycloheximide; Fucose; Geminin; HCT116 Cells; HEK293 Cells; Humans; Peptides; Principal Component Analysis; Protein Biosynthesis; Proteins; Proteome; Proteomics; Quality Control; RNA, Small Interfering; Telomere	2021
Modulation of cellular transcriptome and proteome composition by azidohomoalanine-implications on click chemistry-based secretome analysis. Journal of molecular medicine (Berlin, Germany), 2023, Volume: 101, Issue:7 Topics: Alanine; Azides; Click Chemistry; Proteome; Secretome; Transcriptome	2023
Photo-Methionine, Azidohomoalanine and Homopropargylglycine Are Incorporated into Newly Synthesized Proteins at Different Rates and Differentially Affect the Growth and Protein Expression Levels of Auxotrophic and Prototrophic International journal of molecular sciences, 2023, Jul-22, Volume: 24, Issue:14 Topics: Alanine; Amino Acids; Escherichia coli; Methionine; Proteins; Racemethionine	2023