Page last updated: 2024-08-17

adenosine diphosphate and 3'-o-(n-methylanthraniloyl)adenosine 5'-diphosphate

adenosine diphosphate has been researched along with 3'-o-(n-methylanthraniloyl)adenosine 5'-diphosphate in 47 studies

Research

Studies (47)

TimeframeStudies, this research(%)All Research%
pre-19900 (0.00)18.7374
1990's13 (27.66)18.2507
2000's32 (68.09)29.6817
2010's2 (4.26)24.3611
2020's0 (0.00)2.80

Authors

AuthorsStudies
Cooke, R; Franks-Skiba, K1
Bujalowski, W; Klonowska, MM2
Cross, RA; Lockhart, A1
Bertrand, L; Di Pietro, A; Hue, L; Louckx, MP; Rider, MH; Sontag, B; Vertommen, D; Vidal, H1
Bagshaw, CR; Bauer, CB; Kuhlman, PA; Rayment, I1
Gilbert, SP; Johnson, KA; Moyer, ML1
Cheng, JQ; Hackney, DD; Jiang, W1
Geeves, MA; Kurzawa-Goertz, SE; Perreault-Micale, CL; Szent-Györgyi, AG; Trybus, KM1
Friedman, AL; Geeves, MA; Manstein, DJ; Spudich, JA1
Brown, F; Cheung, HC; Kar, S; Rosenfeld, SS; Sweeney, HL; Xing, J1
Hsieh, J; Lohman, TM; Moore, KJ1
Carter, N; Crevel, I; Cross, R; Schliwa, M1
Gilbert, SP; Mackey, AT2
Bujalowski, W; Jezewska, MJ1
Asakura, T; Maruta, S; Saitoh, J1
Homma, K; Maruta, S1
Bujalowski, W; Galletto, R; Rajendran, S1
Gonzalo, P; Jault, JM; Lavergne, JP; Reboud, JP; Sontag, B1
De La Cruz, EM; Ostap, EM; Sweeney, HL; Wells, AL1
Groemping, Y; Herde, P; Reinstein, J; Schlee, S; Seidel, R1
Brophy, PJ; Crevel, I; Cross, R; Geeves, M; Rogers, KR; Weiss, S1
Bujalowski, W; Galletto, R2
Blangy, A; Crevel, I; Cross, R; DeBonis, S; Ebel, C; Gans, P; Hackney, DD; Kozielski, F; Lebeau, L; Simorre, JP; Skoufias, DA; Wade, RH1
Brendza, KM; Gilbert, SP; Hoenger, A; Klumpp, LM; Rosenberg, JM1
Ballweber, E; Kiessling, P; Mannherz, HG; Manstein, D1
Geeves, MA; Nyitrai, M; Stafford, WF; Szent-Györgyi, AG1
Hackney, DD; Moore, J; Patterson, RA; Stock, MF1
Adams, JA; Aubol, BE; Ghosh, G; Nolen, B; Shaffer, J1
Brendza, KM; Gatial, JE; Gilbert, SP; Hoenger, A; Klumpp, LM; Saxton, WM1
Adams, JA; Aubol, BE; Ghosh, G; Lukasiewicz, R; Ungs, L1
Chou, YT; Ciobanu, DD; Fak, JJ; Gierasch, LM; Hunt, JF; Itkin, A; Lin, EC; Song, XJ1
Frick, DN; Lam, AM; Rypma, RS1
Bujalowski, W; Galletto, R; Jezewska, MJ; Maillard, R2
Bujalowski, W; Jezewska, MJ; Lucius, AL1
Bujalowski, W; Galletto, R; Jezewska, MJ1
Davis, CT; Eccleston, JF; Petrovic, A; Rangachari, K; Wilson, RJ1
Crevel, I; Cross, R; DeBonis, S; Hackney, D; Kozielski, F; Lebeau, L; Saoudi, Y; Skoufias, DA; Wade, RH1
Lee, AM; Singleton, SF1
Jahn, W1
Dove, S; Geduhn, J; Gille, A; Göttle, M; König, B; Schmidt, J; Seifert, R; Shen, Y; Suryanarayana, S; Taha, HM; Tang, WJ1
Barends, TR; Kellner, JN; Reinstein, J; Werbeck, ND1
Cochran, JC; Cooke, R; Jon Kull, F; Larson, AG; Naber, N; Pate, E; Rice, SE; Waitzman, JS1
Cao, W; De La Cruz, EM; Gray, S; Montpetit, B; Montpetit, R; Wong, EV1

Other Studies

47 other study(ies) available for adenosine diphosphate and 3'-o-(n-methylanthraniloyl)adenosine 5'-diphosphate

ArticleYear
The conformation of the active site of myosin probed using mant-nucleotides.
    Biophysical journal, 1995, Volume: 68, Issue:4 Suppl

    Topics: Acrylamide; Acrylamides; Adenosine Diphosphate; Adenosine Triphosphate; Animals; Binding Sites; Biophysical Phenomena; Biophysics; Fluorescent Dyes; Hydrolysis; In Vitro Techniques; Models, Biological; Muscle Contraction; Myosin Subfragments; ortho-Aminobenzoates; Protein Conformation; Rabbits; Spectrometry, Fluorescence

1995
Structural characteristics of the nucleotide-binding site of Escherichia coli primary replicative helicase DnaB protein. Studies with ribose and base-modified fluorescent nucleotide analogs.
    Biochemistry, 1994, Apr-19, Volume: 33, Issue:15

    Topics: Adenine; Adenosine Diphosphate; Bacterial Proteins; Binding Sites; DNA Helicases; DnaB Helicases; Escherichia coli; Fluorescence Polarization; Fluorescent Dyes; Nucleotides; ortho-Aminobenzoates; Ribose; Spectrometry, Fluorescence

1994
Negative cooperativity in the binding of nucleotides to Escherichia coli replicative helicase DnaB protein. Interactions with fluorescent nucleotide analogs.
    Biochemistry, 1993, Jun-08, Volume: 32, Issue:22

    Topics: Adenosine; Adenosine Diphosphate; Bacterial Proteins; Binding, Competitive; DNA Helicases; DnaB Helicases; Escherichia coli; Fluorescent Dyes; Macromolecular Substances; Nucleotides; ortho-Aminobenzoates; Spectrometry, Fluorescence; Thermodynamics

1993
Kinetics and motility of the Eg5 microtubule motor.
    Biochemistry, 1996, Feb-20, Volume: 35, Issue:7

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Base Sequence; DNA Primers; Fluorescent Dyes; Glutathione Transferase; Kinesins; Kinetics; Microtubules; Molecular Sequence Data; ortho-Aminobenzoates; Recombinant Fusion Proteins; Xenopus Proteins

1996
The ATP-binding site in the 2-kinase domain of liver 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase. Study of the role of Lys-54 and Thr-55 by site-directed mutagenesis.
    The Journal of biological chemistry, 1996, Jul-26, Volume: 271, Issue:30

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Animals; Base Sequence; Binding Sites; Circular Dichroism; Isoenzymes; Kinetics; Liver; Lysine; Molecular Sequence Data; Multienzyme Complexes; Mutagenesis, Site-Directed; ortho-Aminobenzoates; Phosphofructokinase-2; Phosphoric Monoester Hydrolases; Phosphotransferases (Alcohol Group Acceptor); Rats; Recombinant Proteins; Threonine

1996
X-ray crystal structure and solution fluorescence characterization of Mg.2'(3')-O-(N-methylanthraniloyl) nucleotides bound to the Dictyostelium discoideum myosin motor domain.
    Journal of molecular biology, 1997, Dec-05, Volume: 274, Issue:3

    Topics: Acrylamide; Acrylamides; Adenosine Diphosphate; Adenosine Triphosphate; Animals; Beryllium; Binding Sites; Crystallography, X-Ray; Dictyostelium; Fluorescence; Fluorides; Magnesium; Models, Molecular; Muscle, Skeletal; Myosins; Nucleic Acid Conformation; ortho-Aminobenzoates; Protein Conformation; Rabbits; Solutions

1997
Alternating site mechanism of the kinesin ATPase.
    Biochemistry, 1998, Jan-20, Volume: 37, Issue:3

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Animals; Binding Sites; Cattle; Drosophila; Isomerism; Kinesins; Kinetics; Macromolecular Substances; ortho-Aminobenzoates; Protein Binding; Protein Structure, Tertiary

1998
Interaction of mant-adenosine nucleotides and magnesium with kinesin.
    Biochemistry, 1998, Apr-14, Volume: 37, Issue:15

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Animals; Drosophila; Energy Transfer; Fluorescent Dyes; Humans; Isomerism; Kinesins; Magnesium; Microtubules; Models, Chemical; Models, Molecular; Myosin Subfragments; ortho-Aminobenzoates; Peptide Fragments; Ultraviolet Rays

1998
Loop I can modulate ADP affinity, ATPase activity, and motility of different scallop myosins. Transient kinetic analysis of S1 isoforms.
    Biochemistry, 1998, May-19, Volume: 37, Issue:20

    Topics: Actins; Adenosine Diphosphate; Adenosine Triphosphate; Animals; Fluorescent Dyes; Kinetics; Mollusca; Muscle, Skeletal; Myosin Subfragments; Myosins; ortho-Aminobenzoates; Protein Binding; Rabbits; Spectrometry, Fluorescence

1998
Kinetic characterization of myosin head fragments with long-lived myosin.ATP states.
    Biochemistry, 1998, Jul-07, Volume: 37, Issue:27

    Topics: Actins; Adenosine Diphosphate; Adenosine Triphosphate; Animals; Dictyostelium; Glutamic Acid; Hydrolysis; Kinetics; Mutagenesis, Site-Directed; Myosins; ortho-Aminobenzoates; Protein Binding; Spectrometry, Fluorescence; Valine

1998
Structural and kinetic studies of phosphorylation-dependent regulation in smooth muscle myosin.
    The Journal of biological chemistry, 1998, Oct-30, Volume: 273, Issue:44

    Topics: Actins; Adenosine Diphosphate; Animals; Ca(2+) Mg(2+)-ATPase; Chickens; Enzyme Activation; Fluorescence Polarization; Fluorescent Dyes; Kinetics; Muscle, Smooth; Myosins; Naphthalenesulfonates; ortho-Aminobenzoates; Phosphorylation; Pyrenes; Recombinant Proteins

1998
A two-site kinetic mechanism for ATP binding and hydrolysis by E. coli Rep helicase dimer bound to a single-stranded oligodeoxynucleotide.
    Journal of molecular biology, 1999, Apr-30, Volume: 288, Issue:2

    Topics: Adenosine Diphosphate; Adenosine Triphosphatases; Adenosine Triphosphate; Bacterial Proteins; Dimerization; DNA Helicases; DNA, Single-Stranded; Escherichia coli; Escherichia coli Proteins; Fluorometry; Hydrolysis; Kinetics; Oligodeoxyribonucleotides; ortho-Aminobenzoates; Protein Binding

1999
Coupled chemical and mechanical reaction steps in a processive Neurospora kinesin.
    The EMBO journal, 1999, Nov-01, Volume: 18, Issue:21

    Topics: Adenosine Diphosphate; Adenosine Triphosphatases; Adenosine Triphosphate; Adenylyl Imidodiphosphate; Dimerization; Fluorescent Dyes; Kinesins; Kinetics; Microscopy, Fluorescence; Microspheres; Microtubules; Neurospora; ortho-Aminobenzoates; Protein Binding; Recombinant Proteins

1999
Moving a microtubule may require two heads: a kinetic investigation of monomeric Ncd.
    Biochemistry, 2000, Feb-15, Volume: 39, Issue:6

    Topics: Adenosine Diphosphate; Adenosine Triphosphatases; Adenosine Triphosphate; Affinity Labels; Animals; Binding Sites; Dimerization; Drosophila melanogaster; Drosophila Proteins; Fluorescent Dyes; Hydrolysis; Kinesins; Kinetics; Microtubules; Molecular Motor Proteins; ortho-Aminobenzoates; Plasmids; Protein Binding

2000
Kinetic mechanism of nucleotide cofactor binding to Escherichia coli replicative helicase DnaB protein. stopped-flow kinetic studies using fluorescent, ribose-, and base-modified nucleotide analogues.
    Biochemistry, 2000, Feb-29, Volume: 39, Issue:8

    Topics: Adenosine Diphosphate; Adenylyl Imidodiphosphate; Bacterial Proteins; Computer Simulation; DNA Helicases; DnaB Helicases; Dose-Response Relationship, Drug; Escherichia coli; Fluorescent Dyes; Kinetics; Models, Chemical; Models, Statistical; Nucleotides; ortho-Aminobenzoates; Protein Conformation; Ribose; Spectrometry, Fluorescence; Thermodynamics; Time Factors

2000
Analysis of conformational changes at the unique loop adjacent to the ATP binding site of smooth muscle myosin using a fluorescent probe.
    Journal of biochemistry, 2000, Volume: 127, Issue:2

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Animals; Beryllium; Binding Sites; Fluorescence; Fluorescent Dyes; Fluorides; Muscle, Smooth; Myosins; ortho-Aminobenzoates; Protein Conformation; Signal Transduction

2000
Conformational changes in the unique loops bordering the ATP binding cleft of skeletal muscle myosin mediate energy transduction.
    Journal of biochemistry, 2000, Volume: 128, Issue:4

    Topics: Acrylamide; Actins; Adenosine Diphosphate; Adenosine Triphosphatases; Adenosine Triphosphate; Animals; Binding Sites; Chickens; Energy Transfer; Fluorescence Polarization; Fluorescent Dyes; Models, Molecular; Molecular Structure; Muscle, Skeletal; Myosin Subfragments; ortho-Aminobenzoates; Photoaffinity Labels; Protein Binding; Protein Conformation; Spectrometry, Fluorescence; Spectrophotometry

2000
Interactions of nucleotide cofactors with the Escherichia coli replication factor DnaC protein.
    Biochemistry, 2000, Oct-24, Volume: 39, Issue:42

    Topics: Adenosine; Adenosine Diphosphate; Adenosine Triphosphate; Affinity Labels; Bacterial Proteins; Binding, Competitive; Bromides; DNA Replication; Escherichia coli; Escherichia coli Proteins; Fluorescent Dyes; Macromolecular Substances; Magnesium Chloride; Nucleotides; ortho-Aminobenzoates; Ribose; Sodium Chloride; Sodium Compounds; Sugar Phosphates

2000
Evidence for a second nucleotide binding site in rat elongation factor eEF-2 specific for adenylic nucleotides.
    Biochemistry, 2000, Nov-07, Volume: 39, Issue:44

    Topics: Adenine Nucleotides; Adenosine Diphosphate; Adenosine Triphosphate; Affinity Labels; Amino Acid Sequence; Animals; Binding, Competitive; Chickens; Cricetinae; Cricetulus; Energy Transfer; Fluorescent Dyes; Guanosine Diphosphate; Guanosine Triphosphate; Humans; Molecular Sequence Data; ortho-Aminobenzoates; Peptide Elongation Factor 2; Protein Binding; Rats; Spectrometry, Fluorescence

2000
Actin and light chain isoform dependence of myosin V kinetics.
    Biochemistry, 2000, Nov-21, Volume: 39, Issue:46

    Topics: Actins; Adenosine Diphosphate; Adenosine Triphosphate; Amino Acid Motifs; Animals; Calmodulin-Binding Proteins; Chickens; Kinetics; Muscle, Skeletal; Myosin Light Chains; Myosin Type V; Myosins; Nerve Tissue Proteins; ortho-Aminobenzoates; Protein Binding; Protein Isoforms; Rabbits; Spectrometry, Fluorescence; Tryptophan

2000
The chaperone function of ClpB from Thermus thermophilus depends on allosteric interactions of its two ATP-binding sites.
    Journal of molecular biology, 2001, Mar-02, Volume: 306, Issue:4

    Topics: Adenosine Diphosphate; Adenosine Triphosphatases; Adenosine Triphosphate; Allosteric Regulation; Allosteric Site; Amino Acid Substitution; Bacterial Proteins; Endopeptidase Clp; Enzyme Activation; Escherichia coli Proteins; Heat-Shock Proteins; Hot Temperature; HSP40 Heat-Shock Proteins; HSP70 Heat-Shock Proteins; Hydrolysis; Kinetics; Luciferases; Molecular Chaperones; Mutation; ortho-Aminobenzoates; Osmolar Concentration; Protein Binding; Protein Denaturation; Protein Renaturation; Protein Structure, Tertiary; Spectrometry, Fluorescence; Thermodynamics; Thermus thermophilus

2001
KIF1D is a fast non-processive kinesin that demonstrates novel K-loop-dependent mechanochemistry.
    The EMBO journal, 2001, Sep-17, Volume: 20, Issue:18

    Topics: Adenosine Diphosphate; Amino Acid Motifs; Amino Acid Sequence; Animals; Biomechanical Phenomena; Kinesins; Kinetics; Microtubules; Models, Biological; Molecular Motor Proteins; Molecular Sequence Data; Movement; Mutagenesis, Insertional; Nerve Tissue Proteins; ortho-Aminobenzoates; Protein Structure, Tertiary; Sequence Deletion; Sequence Homology, Amino Acid

2001
The E. coli replication factor DnaC protein exists in two conformations with different nucleotide binding capabilities. I. Determination of the binding mechanism using ATP and ADP fluorescent analogues.
    Biochemistry, 2002, Jul-16, Volume: 41, Issue:28

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Binding Sites; DNA Replication; Escherichia coli; Escherichia coli Proteins; Fluorescent Dyes; Kinetics; Ligands; Models, Theoretical; Nucleotides; ortho-Aminobenzoates; Protein Conformation

2002
Kinetics of the E. coli replication factor DnaC protein-nucleotide interactions. II. Fluorescence anisotropy and transient, dynamic quenching stopped-flow studies of the reaction intermediates.
    Biochemistry, 2002, Jul-16, Volume: 41, Issue:28

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Escherichia coli; Escherichia coli Proteins; Fluorescent Dyes; Kinetics; Models, Theoretical; ortho-Aminobenzoates; Spectrometry, Fluorescence; Spectroscopy, Fourier Transform Infrared

2002
The ATPase cross-bridge cycle of the Kar3 motor domain. Implications for single head motility.
    The Journal of biological chemistry, 2003, Feb-07, Volume: 278, Issue:6

    Topics: Adenosine Diphosphate; Adenosine Triphosphatases; Adenosine Triphosphate; Dimerization; Kinetics; Microtubule-Associated Proteins; ortho-Aminobenzoates; Protein Binding; Saccharomyces cerevisiae; Saccharomyces cerevisiae Proteins

2003
Interaction of the mitotic inhibitor monastrol with human kinesin Eg5.
    Biochemistry, 2003, Jan-21, Volume: 42, Issue:2

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Animals; Cattle; Dose-Response Relationship, Drug; Dyneins; Enzyme Activation; Growth Inhibitors; HeLa Cells; Humans; Inhibitory Concentration 50; Kinesins; Microscopy, Interference; Microscopy, Video; Microtubules; Nuclear Magnetic Resonance, Biomolecular; ortho-Aminobenzoates; Peptide Fragments; Protein Structure, Tertiary; Pyrimidines; Sequence Deletion; Sodium Chloride; Stereoisomerism; Thiones

2003
Motor domain mutation traps kinesin as a microtubule rigor complex.
    Biochemistry, 2003, Mar-11, Volume: 42, Issue:9

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Alanine; Animals; Binding Sites; Cattle; Dimerization; Drosophila Proteins; Glutamic Acid; Humans; Hydrolysis; Kinesins; Kinetics; Microtubules; Molecular Motor Proteins; Mutagenesis, Site-Directed; ortho-Aminobenzoates; Protein Structure, Tertiary; Rats; Static Electricity

2003
Interaction of myosin subfragment 1 with forms of monomeric actin.
    Biochemistry, 2003, Mar-18, Volume: 42, Issue:10

    Topics: Actins; Adenosine Diphosphate; Adsorption; Animals; Binding, Competitive; Cattle; Chromatography, Affinity; Cross-Linking Reagents; Deoxyribonuclease I; Dictyostelium; Enzymes, Immobilized; Ethyldimethylaminopropyl Carbodiimide; Hydrolysis; Magnesium; Myosin Subfragments; ortho-Aminobenzoates; Osmolar Concentration; Protozoan Proteins; Pyrenes; Rabbits; Spectrometry, Fluorescence; Titrimetry; Trypsin; Vitamin D-Binding Protein

2003
Ionic interactions play a role in the regulatory mechanism of scallop heavy meromyosin.
    Biophysical journal, 2003, Volume: 85, Issue:2

    Topics: Adenosine Diphosphate; Animals; Calcium; Computer Simulation; Fractionation, Field Flow; Ions; Kinetics; Models, Chemical; Molecular Motor Proteins; Mollusca; Muscle, Skeletal; Myosin Subfragments; ortho-Aminobenzoates; Potassium Chloride; Protein Binding; Protein Conformation; Structure-Activity Relationship

2003
Modulation of kinesin half-site ADP release and kinetic processivity by a spacer between the head groups.
    Biochemistry, 2003, Oct-21, Volume: 42, Issue:41

    Topics: Adenosine Diphosphate; Adenosine Triphosphatases; Amino Acid Substitution; Animals; Dimerization; Drosophila Proteins; Kinesins; Kinetics; Microtubules; Molecular Motor Proteins; Mutagenesis, Insertional; ortho-Aminobenzoates; Plasmids; Protein Processing, Post-Translational; Protein Structure, Secondary

2003
Novel destabilization of nucleotide binding by the gamma phosphate of ATP in the yeast SR protein kinase Sky1p.
    Biochemistry, 2003, Nov-11, Volume: 42, Issue:44

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Binding Sites; Cyclic AMP-Dependent Protein Kinases; Electron Transport; Enzyme Stability; Magnesium; Mutagenesis, Insertional; ortho-Aminobenzoates; Protein Serine-Threonine Kinases; Protein Structure, Tertiary; Recombinant Proteins; Saccharomyces cerevisiae Proteins; Sequence Deletion; Spectrometry, Fluorescence; Substrate Specificity

2003
Microtubule-kinesin interface mutants reveal a site critical for communication.
    Biochemistry, 2004, Mar-16, Volume: 43, Issue:10

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Alanine; Animals; Binding Sites; Catalysis; Cell Communication; Drosophila Proteins; Glutamic Acid; Hydrolysis; Kinesins; Kinetics; Lysine; Microtubules; Molecular Motor Proteins; Mutagenesis, Site-Directed; ortho-Aminobenzoates

2004
Chemical clamping allows for efficient phosphorylation of the RNA carrier protein Npl3.
    The Journal of biological chemistry, 2004, Jul-16, Volume: 279, Issue:29

    Topics: Adenosine Diphosphate; Binding Sites; Catalysis; Kinetics; Models, Biological; Models, Chemical; Nuclear Proteins; ortho-Aminobenzoates; Peptides; Phosphoproteins; Phosphorylation; Protein Binding; Protein Structure, Tertiary; RNA; RNA-Binding Proteins; RNA, Messenger; Saccharomyces cerevisiae Proteins; Serine; Spectrometry, Fluorescence; Threonine; Time Factors

2004
Nucleotide exchange from the high-affinity ATP-binding site in SecA is the rate-limiting step in the ATPase cycle of the soluble enzyme and occurs through a specialized conformational state.
    Biochemistry, 2004, Jun-15, Volume: 43, Issue:23

    Topics: Adenosine Diphosphate; Adenosine Triphosphatases; Adenosine Triphosphate; Adenylyl Imidodiphosphate; Bacterial Proteins; Binding Sites; Kinetics; Magnesium; Membrane Proteins; Membrane Transport Proteins; Mutation; ortho-Aminobenzoates; Protein Conformation; SEC Translocation Channels; SecA Proteins; Serine Endopeptidases; Solubility; Temperature

2004
Enhanced nucleic acid binding to ATP-bound hepatitis C virus NS3 helicase at low pH activates RNA unwinding.
    Nucleic acids research, 2004, Volume: 32, Issue:13

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Catalysis; DNA; DNA Helicases; Enzyme Activation; Hydrogen-Ion Concentration; Magnesium; ortho-Aminobenzoates; RNA; RNA Helicases; Viral Nonstructural Proteins

2004
Global conformation of the Escherichia coli replication factor DnaC protein in absence and presence of nucleotide cofactors.
    Biochemistry, 2004, Aug-31, Volume: 43, Issue:34

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Allosteric Regulation; DNA Replication; Escherichia coli; Escherichia coli Proteins; Fluorescence Polarization; Magnesium Chloride; Models, Chemical; ortho-Aminobenzoates; Protein Binding; Protein Conformation; Solutions; Thermodynamics; Ultracentrifugation

2004
Binding of six nucleotide cofactors to the hexameric helicase RepA protein of plasmid RSF1010. 1. Direct evidence of cooperative interactions between the nucleotide-binding sites of a hexameric helicase.
    Biochemistry, 2005, Mar-15, Volume: 44, Issue:10

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Binding Sites; Coenzymes; DNA Helicases; DNA Replication; DNA-Binding Proteins; Models, Chemical; ortho-Aminobenzoates; Plasmids; Protein Subunits; Spectrometry, Fluorescence; Thermodynamics; Trans-Activators; Tryptophan

2005
Kinetics of allosteric conformational transition of a macromolecule prior to ligand binding: analysis of stopped-flow kinetic experiments.
    Cell biochemistry and biophysics, 2005, Volume: 42, Issue:2

    Topics: Adenosine Diphosphate; Algorithms; Computer Simulation; Escherichia coli Proteins; Flow Injection Analysis; Kinetics; Ligands; Macromolecular Substances; Models, Chemical; Molecular Conformation; Motion; ortho-Aminobenzoates; Protein Binding; Stereoisomerism

2005
The nucleotide-binding site of the Escherichia coli DnaC protein: molecular topography of DnaC protein-nucleotide cofactor complexes.
    Cell biochemistry and biophysics, 2005, Volume: 43, Issue:3

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Binding Sites; Escherichia coli; Escherichia coli Proteins; Hydrophobic and Hydrophilic Interactions; Magnesium Chloride; ortho-Aminobenzoates; Protein Conformation; Spectrometry, Fluorescence; Tryptophan; Tyrosine

2005
The kinetic mechanism of the SufC ATPase: the cleavage step is accelerated by SufB.
    The Journal of biological chemistry, 2006, Mar-31, Volume: 281, Issue:13

    Topics: Adenosine Diphosphate; Adenosine Triphosphatases; Adenosine Triphosphate; Bacterial Proteins; Chromatography, High Pressure Liquid; Escherichia coli; Fluorescence Polarization; Fluorescent Dyes; Iron-Sulfur Proteins; Kinetics; Operon; ortho-Aminobenzoates; Phosphorus; Protein Conformation; Thermotoga maritima

2006
S-trityl-L-cysteine is a reversible, tight binding inhibitor of the human kinesin Eg5 that specifically blocks mitotic progression.
    The Journal of biological chemistry, 2006, Jun-30, Volume: 281, Issue:26

    Topics: Adenosine Diphosphate; Animals; Bone Neoplasms; Cattle; Cell Division; Cysteine; Drug Design; HeLa Cells; Humans; Kinesins; Mitosis; ortho-Aminobenzoates; Osteosarcoma; Protein Binding; Protein Structure, Tertiary; Recombinant Proteins; Spindle Apparatus; Stereoisomerism

2006
Intersubunit electrostatic complementarity in the RecA nucleoprotein filament regulates nucleotide substrate specificity and conformational activation.
    Biochemistry, 2006, Apr-11, Volume: 45, Issue:14

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Amino Acid Sequence; Aspartic Acid; DNA, Single-Stranded; Models, Molecular; Nucleotides; ortho-Aminobenzoates; Protein Conformation; Rec A Recombinases; Static Electricity; Substrate Specificity

2006
The association of actin and myosin in the presence of gamma-amido-ATP proceeds mainly via a complex with myosin in the closed conformation.
    Biochemistry, 2007, Aug-21, Volume: 46, Issue:33

    Topics: Actins; Adenosine Diphosphate; Adenylyl Imidodiphosphate; Animals; Dictyostelium; Fluorescence; Myosins; ortho-Aminobenzoates; Protein Conformation; Spectrometry, Fluorescence; Tryptophan

2007
Molecular analysis of the interaction of anthrax adenylyl cyclase toxin, edema factor, with 2'(3')-O-(N-(methyl)anthraniloyl)-substituted purine and pyrimidine nucleotides.
    Molecular pharmacology, 2009, Volume: 75, Issue:3

    Topics: Adenosine Diphosphate; Adenylyl Cyclases; Adenylyl Imidodiphosphate; Animals; Anthrax Vaccines; Antigens, Bacterial; Bacterial Toxins; Catalysis; Cattle; Crystallography, X-Ray; Fluorescence Resonance Energy Transfer; Mutagenesis, Site-Directed; ortho-Aminobenzoates; Protein Binding; Purine Nucleotides; Pyrimidine Nucleotides

2009
Nucleotide binding and allosteric modulation of the second AAA+ domain of ClpB probed by transient kinetic studies.
    Biochemistry, 2009, Aug-04, Volume: 48, Issue:30

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; Allosteric Regulation; Bacterial Proteins; Fluorescent Dyes; Heat-Shock Proteins; Models, Molecular; Nucleotides; ortho-Aminobenzoates; Protein Binding; Protein Conformation; Thermus thermophilus

2009
The loop 5 element structurally and kinetically coordinates dimers of the human kinesin-5, Eg5.
    Biophysical journal, 2011, Dec-07, Volume: 101, Issue:11

    Topics: Adenosine Diphosphate; Adenosine Triphosphatases; Electron Spin Resonance Spectroscopy; Humans; Kinesins; Kinetics; Microtubules; Models, Molecular; Molecular Probes; Mutant Proteins; Mutation; Nucleotides; ortho-Aminobenzoates; Protein Multimerization; Protein Structure, Secondary; Protein Transport; Solutions; Structure-Activity Relationship

2011
Nup159 Weakens Gle1 Binding to Dbp5 But Does Not Accelerate ADP Release.
    Journal of molecular biology, 2018, 07-06, Volume: 430, Issue:14

    Topics: Adenosine Diphosphate; Adenosine Triphosphate; DEAD-box RNA Helicases; Humans; Magnesium; Nuclear Pore Complex Proteins; Nucleocytoplasmic Transport Proteins; ortho-Aminobenzoates; Protein Binding; RNA

2018