adenine has been researched along with oligonucleotides in 226 studies
| Timeframe | Studies, this research(%) | All Research% |
|---|---|---|
| pre-1990 | 43 (19.03) | 18.7374 |
| 1990's | 32 (14.16) | 18.2507 |
| 2000's | 98 (43.36) | 29.6817 |
| 2010's | 44 (19.47) | 24.3611 |
| 2020's | 9 (3.98) | 2.80 |
| Authors | Studies |
|---|---|
| Pitha, J | 1 |
| Pörschke, D | 1 |
| Kinniburgh, AJ; Martin, TE | 1 |
| Raska, K; Varricchio, F | 1 |
| Blinov, MN; Egorova, VA | 1 |
| Friderici, K; Kelley, DE; Perry, RP; Rottman, F | 1 |
| Margison, GP; O'Connor, PJ | 1 |
| Cech, TR; Murphy, FL; Pyle, AM | 1 |
| Louis, DN; Seizinger, BR; von Deimling, A | 1 |
| Ding, ZM; Hurley, LH | 1 |
| Li, Y; Wilson, WD; Zon, G | 1 |
| Collier, DA; Helene, C; Mergny, JL; Thuong, NT | 1 |
| Kamiya, H; Miura, K; Nishimura, S; Ohtomo, N; Ohtsuka, E | 1 |
| Edwards, EL; Gray, DM; Patrick, MH; Ratliff, RL | 1 |
| Fujii, S | 1 |
| Fazakerley, GV; Gabarro-Arpa, J; Guschlbauer, W; Guy, A; Lebret, M | 1 |
| Mazzarelli, J; McLaughlin, LW; Scholtissek, S | 1 |
| Duplaa, AM; Guy, A; Teoule, R | 1 |
| Manzini, G; Quadrifoglio, F; van Boom, JH; van der Marel, GA; Xodo, LE; Yathindra, N | 1 |
| Hurley, LH; Lee, CS; Needham-VanDevanter, DR | 1 |
| Weber, JL | 1 |
| Gao, XL; Patel, DJ | 1 |
| Holley, RW; Powers, DM | 1 |
| Edmonds, M; McLaughlin, CS; Nakazato, H; Vaughan, MH; Warner, JR | 1 |
| Hayes, FN; Smith, DA; Strniste, GF | 1 |
| McCarthy, BJ; Ullman, JS | 1 |
| Anderson, WM; Remy, CN; Sipe, JE | 1 |
| Groner, B; Hynes, N; Phillips, S | 1 |
| DeLarco, J; Guroff, G | 1 |
| Dahlberg, JE; Lai, CJ; Weisblum, B | 1 |
| Borer, PN; Dengler, B; Tinoco, I; Uhlenbeck, OC | 1 |
| Crothers, DM; Gralla, J | 1 |
| Bernardi, G; Ehrlich, SD; Thiery, JP | 1 |
| Ohtani, Y; Ono, A; Sato, M; Ueda, T | 1 |
| Morden, KM; Pardi, A; Patel, DJ; Tinoco, I | 1 |
| Bose, SN; Davies, RJ | 1 |
| Chandrasegaran, S; Kan, LS; Miller, PS; Pulford, SM | 1 |
| Fujisaki, Y; Kubota, Y; Motoda, Y; Steiner, RF | 1 |
| Hakoshima, T; Rich, A; van Boom, JH; van der Marel, G; Wang, AH | 1 |
| Eckstein, H; Schott, H | 1 |
| Crothers, DM; Shum, BW | 1 |
| Chu, YG; Tinoco, I | 1 |
| Altona, C; Haasnoot, CA; Lankhorst, PP; van Boom, JH; Wille, G | 1 |
| Fujisaki, Y; Kubota, Y; Sanjoh, A | 1 |
| Inaki, Y; Sakuma, Y; Takemoto, K | 1 |
| Altona, C; Haasnoot, CA; Mellema, JR; Van Boom, JH | 1 |
| Alkema, D; Bell, RA; Everett, JR; Hughes, DW; Neilson, T; Romaniuk, PJ | 1 |
| Hayatsu, H; Matsuda, A; Negishi, K; Noskov, V; Ono, A; Ono, B | 1 |
| Donne, DG; Gorenstein, DG; Gozansky, EK | 1 |
| Ramaswamy, M; Yeung, AT | 1 |
| Amici, L; Gasparro, FP; Park, J | 1 |
| Bonneil, E; Merle, L; Merle, Y; Sági, J; Szemzö, A | 1 |
| Guy, RH; Hueber, F; Szoka, FC; van der Geest, R | 1 |
| Choi, BS; Park, JY | 1 |
| Chen, MS; Cherrington, JM; Fuller, MD; Mulato, AS | 1 |
| Linscheid, M; Schrader, W | 1 |
| Kool, ET; Liu, D; Moran, S | 1 |
| Boiteux, S; Cadet, J; D'Ham, C; Girard, PM | 1 |
| Beveridge, DL; Young, MA | 1 |
| David, SS; Leyes, AE; Porello, SL | 1 |
| Hang, B; Sági, J; Singer, B | 1 |
| Endová, M; Liboska, R; Pressová, M; Rosenberg, I; Toĉík, Z | 1 |
| Bergstrom, DE; Glass, GA; Hua, P; Kinsey, BM; Klysik, J; Orson, FM; Ward, B | 1 |
| Evdokimov, AA; Hattman, S; Jen-Jacobson, L; Kossykh, VG; Malygin, EG; Petrov, NA; Zinoviev, VV | 1 |
| Bronson Mullins, CR; Chang, DW; Oleykowski, CA; Yeung, AT | 1 |
| Langley, DR | 1 |
| Geacintov, NE; Loechler, EL; Shukla, R | 1 |
| Kang, C; Min, T; Sinha, N; Sutherland, C; Wang, S; Weil, J; Yang, C | 1 |
| Dahl, O; Lohse, J; Nielsen, PE | 1 |
| Asaeda, A; Asagoshi, K; Ide, H; Kubo, K; Matsuyama, S; Murakami, A; Takamori, Y; Tano, K | 1 |
| Allen, GW; Hambley, TW; Ling, EC; Vickery, K | 1 |
| Anderson, RC; Lin, M; Shapiro, MJ | 1 |
| Osheroff, N; Sabourin, M | 1 |
| Furuichi, M; Hamasaki, N; Kang, D; Miyako, K; Nakabeppu, Y; Sekiguchi, M; Tajiri, T; Takamatsu, C; Takeshige, K; Umeda, S | 1 |
| Kim, YS; Moon, KY | 1 |
| Babaie, E; Gebhardt, K; Lindqvist, BH; Shokraei, A | 1 |
| Beggs, JM; Nicolas, E; Taraschi, TF | 1 |
| Hoffmann, AK; Hüttermann, J | 1 |
| Cohen, SM; He, Q; Lippard, SJ; Mikata, Y | 1 |
| Arimondo, PB; Garestier, T; Hélène, C; Sun, JS | 1 |
| Lan, T; McLaughlin, LW | 1 |
| Cogoi, S; Quadrifoglio, F; Rapozzi, V; Xodo, L | 1 |
| Håkansson, AE; Wengel, J | 1 |
| Harris, CM; Harris, TM; Nechev, LV; Tamura, PJ; Tsarouhtsis, D; Wilkinson, AS; Zhang, M | 1 |
| Kontogiannis, L; Lilley, DM; Maxwell, K; Wilson, TJ; Zhao, ZY | 1 |
| Gross, ML; Taylor, JS; Wang, Y | 2 |
| Finneman, J; Harris, CM; Harris, TM; Hennard, C; Stone, MP | 1 |
| Agarwal, V; Ertem, G; Ferris, JP; Hua, LL | 1 |
| Orgel, LE; Wu, T | 1 |
| Ferris, JP; Prabahar, KJ | 1 |
| Cooper, M; Harris, CM; Harris, TM; Kim, HY; Nechev, LV | 1 |
| Barone, F; Cellai, L; Giordano, C; La Sala, G; Mazzei, F | 1 |
| Geinguenaud, F; Gouyette, C; Huynh-Dinh, T; Khomyakova, E; Liquier, J; Taillandier, E | 1 |
| Maeda, M; Matsuyama, Y; Nagatsugi, F; Sasaki, S | 1 |
| Park, HJ | 1 |
| He, WJ; Liu, WY; Stirpe, F; Tang, S | 1 |
| Hawkins, ME | 1 |
| Burdzy, A; Lin, SS; Liu, P; Rogstad, DK; Sowers, LC | 1 |
| Guliaev, AB; Hang, B; Singer, B | 1 |
| Chan, TW; Fung, YM; Li, YC | 1 |
| Bernards, AS; Miller, JK; Wirz, JA; Wong, I | 1 |
| Benhida, R; Fourrey, JL; Guianvarc'h, D; Maurisse, R; Sun, JS | 1 |
| Okamoto, A; Saito, I; Tanaka, K | 1 |
| Burdzy, A; Liu, P; Ryu, J; Sowers, LC; Valinluck, V | 1 |
| Barciszewska, MZ; Barciszewski, J; Clark, BF; Markiewicz, M; Markiewicz, WT; Szymański, M; Wyszko, E | 1 |
| Bombard, S; Chottard, JC; Elizondo-Riojas, MA; Redon, S | 1 |
| Mukerji, I; Wojtuszewski, K | 1 |
| Bohr, VA; Calvayrac, G; Jensen, A; Karahalil, B; Stevnsner, T | 1 |
| Kejnovská, I; Kypr, J; Vorlícková, M | 1 |
| Bando, T; Sugiyama, H; Takahashi, R | 1 |
| Berti, PJ; McCann, JA | 1 |
| Kawai, K; Majima, T; Takada, T; Tojo, S | 1 |
| Dickerson, RE; Han, GW; Kopka, ML; Langs, D; Sawaya, MR | 1 |
| Fukuta, T; Okamoto, A; Saito, I; Tanaka, K | 1 |
| Duncan, T; Koivisto, P; Lindahl, T; Sedgwick, B | 1 |
| He, J; Seela, F | 1 |
| BROWN, GL; LEE, S; MCMULLEN, D; STOKES, AR | 1 |
| BRADLEY, DF; HEPPEL, LA; LIPSETT, MN | 1 |
| Bombard, S; Chottard, JC; Kozelka, J; Monjardet-Bas, V | 1 |
| Kierzek, AM; Speina, E; Tudek, B | 1 |
| Ellenberger, T; O'Brien, PJ | 1 |
| Adhya, S; Lee, HJ; Lim, HM | 1 |
| Birkus, G; Holy, A; Otmar, M; Rejman, D; Rosenberg, I; Votruba, I | 1 |
| Baitinger, C; Martik, D; Modrich, P | 1 |
| Owens, RA; Park, SW; Vepachedu, R; Vivanco, JM | 1 |
| Larivière, L; Moréra, S | 1 |
| Budko, EV; Dong, B; Kalinichenko, EN; Mikhailopulo, IA; Podkopaeva, TL; Seela, F; Silverman, R; Torrence, PF; Vepsäläinen, J | 1 |
| Bevilacqua, PC; Brown, TS; Moody, EM | 1 |
| David, SS; Pope, MA | 1 |
| Howerton, SB; Maehigashi, T; Sines, CC; Tannenbaum, S; Williams, LD; Woods, KK | 1 |
| Hutter, E; Tokareva, I | 1 |
| Kozelka, J; Sletten, E; Vinje, J | 1 |
| Dohno, C; Saito, I | 1 |
| Cheng, X; Hattman, S; Horton, JR; Jeltsch, A; Liebert, K | 1 |
| Cottrell, JW; Da Costa, CP; Fedor, MJ; Kuzmin, YI | 1 |
| Lindemose, S; Møllegaard, NE; Nielsen, PE | 1 |
| Colman, RF; Huang, YC | 1 |
| Cohen, B; Crespo-Hernández, CE; Kohler, B | 1 |
| Busson, R; Herdewijn, P; Lagoja, IM; Rozenski, J; Van Aerschot, A; Zhou, D | 1 |
| Alam, R; Cuenoud, B; Glazer, PM; Kuan, JY; Liu, ST; Majumdar, A; Miller, PS; Seidman, MM; Shahid, KA; Sui, X | 1 |
| Carloni, P; Rothlisberger, U; Spiegel, K | 1 |
| Buck, DP; Collins, JG; Keene, FR; Morgan, JL; Turley, AG | 1 |
| Ishihara, S; Ito, Y; Kitade, Y; Ueno, Y | 1 |
| Hason, S; Vetterl, V | 1 |
| Kwok, WM; Ma, C; Phillips, DL | 1 |
| Kenttämaa, HI; Liu, JA; Petzold, CJ; Shea, RC | 1 |
| Ghorbani-Choghamarani, A; Hudson, RH | 1 |
| Bonechi, C; Ciani, L; Martini, G; Ristori, S; Rossi, C | 1 |
| Nomura, A; Okamoto, A; Tainaka, K; Tanaka, K; Umemoto, T | 1 |
| Böhme, D; Düpre, N; Megger, DA; Müller, J | 1 |
| Ahlborn, C; Richert, C; Siegmund, K | 1 |
| David, SS; Kim, T; Kool, ET; Livingston, AL; O'Shea, VL | 1 |
| Andersen, NK; Hrdlicka, PJ; Wengel, J | 1 |
| Kazimierczuk, Z; Michalek, E; Ramzaeva, N; Rosemeyer, H; Seela, F | 1 |
| Banerjee, D; Pal, SK | 1 |
| Chittepu, P; Seela, F | 1 |
| Inoue, N; Kawano, Y; Matsuda, A; Minakawa, N; Murata, S | 1 |
| Haruta, O; Hashimoto, Y; Ijiro, K; Matsuo, Y; Niikura, K | 1 |
| Brown, T; El-Sagheer, AH; Lincoln, P; Nordell, P; Nordén, B; Reymer, A; Westerlund, F | 1 |
| Augustyn, KE; Barton, JK; Davis, ML; Genereux, JC; Shao, F | 1 |
| Cai, Z; Chan, W; Wong, RN; Yue, H | 1 |
| Ciciriello, F; Costanzo, G; Di Mauro, E; Pino, S | 1 |
| Abdul Majid, AM; Denny, WA; Smythe, G; Wakelin, LP | 1 |
| Hari, Y; Imanishi, T; Kodama, T; Mitsuoka, Y; Obika, S; Ohnishi, R | 1 |
| Church, GM; Sismour, AM; Vigneault, F | 1 |
| Delaney, JC; Essigmann, JM; Kartalou, M; Lee, CY; Lingaraju, GM; Maor-Shoshani, A; Samson, LD | 1 |
| Merchán, M; Olaso-González, G; Serrano-Andrés, L | 1 |
| Germann, MW; Spring, A; Zhang, J | 1 |
| Meggers, E; Schlegel, MK | 1 |
| Chen, G; Kennedy, SD; Turner, DH | 1 |
| Beierle, JM; Ghadiri, MR; Leman, LJ; Orgel, LE; Ura, Y | 1 |
| Kim, CH; Neidigh, JW; Rogstad, DK; Sowers, LC; Theruvathu, JA | 1 |
| Belous, LF; Rubin, YV; Yakuba, CA | 1 |
| Pujari, SS; Seela, F | 1 |
| Hari, Y; Imanishi, T; Kodama, T; Obika, S | 1 |
| Howell, C; Koelsch, P; Zhao, J; Zharnikov, M | 1 |
| Erdem, A; Karagözler, AE; Muti, M; Soysal, M | 1 |
| Chatelain, G; Rozenski, J; Schepers, G; Van Aerschot, A | 1 |
| Leonard, JP | 1 |
| Bag, SS; Kundu, R; Matsumoto, K; Talukdar, S | 1 |
| Buckle, M; Fedorova, OS; Gasparutto, D; Ishchenko, AA; Leh, H; Prorok, P; Saint-Pierre, C; Saparbaev, M; Tudek, B | 1 |
| Baik, SK; Chae, HB; Hong, SP; Kim, CW; Kim, JH; Kim, MY; Kim, YS; Lee, CD; Lee, JI; Lee, JW; Lee, MS; Park, CK; Park, SH; Seo, YS; Um, SH; Yim, HJ; Yoon, EL | 1 |
| Calabretta, A; Leumann, CJ | 1 |
| Capobianco, A; Caruso, T; Celentano, M; D'Ursi, AM; Peluso, A; Scrima, M | 1 |
| Tang, X; Zhang, M; Zhao, D | 1 |
| Bussi, G; Colizzi, F; Di Palma, F | 1 |
| Amin, S; Chen, KM; El-Bayoumy, K; Geacintov, N; Kolbanovskiy, A; Kolbanovskiy, M; Kropachev, K; Krzeminski, J; Reeves, D; Sharma, AK | 1 |
| Holmgren, R; Moyle-Heyrman, G; Uhlenbeck, OC; Wang, JP; Widom, J; Xi, L; Zaichuk, T; Zhang, Q | 1 |
| Andersen, NK; Anderson, BA; Hrdlicka, PJ; Wengel, J | 1 |
| Chen, H; Chen, J; Jiang, L; Li, D; Lin, J; Ou, Q; Su, M; Wang, W; Yang, B; Zeng, Y | 1 |
| Couve, S; Gros, L; Ishchenko, AA; Matkarimov, B; Saparbaev, MK; Talhaoui, I | 1 |
| Bogojeski, JJ; Damha, MJ; Johnsson, RA | 1 |
| Hamoudi, H; Howell, C; Zharnikov, M | 1 |
| Matsika, S; Spata, VA | 2 |
| Golubev, O; Lönnberg, T; Taherpour, S | 1 |
| Capobianco, A; Caruso, T; Peluso, A | 1 |
| Belogurov, GA; Malinen, AM; Turtola, M | 1 |
| Froeyen, M; Kachare, D; Rozenski, J; Schepers, G; Van Aerschot, A; Venkatesham, A | 1 |
| Hocková, D; Ménová, P; Novák, P; Páv, O; Pohl, R; Rosenberg, I; Rosenbergová, Š | 1 |
| D'Alonzo, D; Di Fabio, G; Froeyen, M; Guaragna, A; Herdewijn, P; Palumbo, G; Schepers, G; Van Aerschot, A | 1 |
| Kosbar, TR; Pedersen, EB; Sofan, MA; Waly, MA | 1 |
| Hasegawa, O; Hoshino, H; Kasahara, Y; Kuwahara, M; Morihiro, K; Nakajima, K; Obika, S; Tsunoda, S | 1 |
| Brazard, J; Burghardt, I; Gustavsson, T; Huix-Rotllant, M; Improta, R; Lewis, FD; Markovitsi, D; Thazhathveetil, AK; Vayá, I | 1 |
| Brown, T; Shivalingam, A | 1 |
| Cedillo, I; McPherson, AK; Rodriguez, AA | 1 |
| Seela, F; Yang, H | 1 |
| Bittová, M; Havliš, J; Jaroň, KS; Kulhánek, P; Mikulášek, K | 1 |
| Hebenbrock, M; Mandal, S; Müller, J | 1 |
| Guo, X; Leonard, P; Seela, F; Yang, H; Zhao, H | 1 |
| Hausinger, RP; Müller, TA; Perian, MN; Tobar, MA | 1 |
| Bednárová, K; Dvoráková, Z; Fiala, R; Kejnovská, I; Renciuk, D; Sagi, J; Školáková, P; Trantírek, L; Vorlícková, M | 1 |
| Jablonska, A; Jaworska, A; Kudelski, A; Palys, B; Sek, S; Wilanowski, T | 1 |
| Demissie, A; Dickson, RM; Huard, DJE; Kim, D; Lewis, D; Lieberman, RL; Petty, JT | 1 |
| Fujisaka, A; Hari, Y; Imanishi, T; Obika, S; Pang, J; Rahman, SMA; Takuma, H; Yoshikawa, H | 1 |
| Jordan, B | 1 |
| Hiroaki, H; Kodama, T; Moai, Y; Obika, S | 1 |
| Aralov, AV; Barceló-Oliver, M; Hebenbrock, M; Müller, J; Schönrath, I; Tsvetkov, VB; Zatsepin, TS | 1 |
| Abzalimov, R; Champeil, E; Petrovic, AG; Pradhan, P; Zacarias, O | 1 |
| Cho, NH; Chung, HW; Han, JH; Han, JW; Im, SW; Kim, H; Kim, JW; Kim, RM; Kim, YB; Lee, HE; Lee, YH; Lee, YY; Nam, KT; Namgung, SD | 1 |
| Datta, D; Egli, M; Madaoui, M; Manoharan, M; Ross, BS; Wassarman, K; Zlatev, I | 1 |
| Forough, M; Persil Çetinkol, Ö; Usta, HM | 1 |
| Bao, L; Xiao, Y | 1 |
| Guo, L; Tang, L; Wang, C; Xiao, L; Xie, J; Yang, Z | 1 |
| Baladi, T; Benitez-Martin, C; Dahlén, A; Le, HN; Magennis, SW; Nilsson, JR; Pfeiffer, P; Sansom, HG; Wilhelmsson, LM | 1 |
4 review(s) available for adenine and oligonucleotides
| Article | Year |
|---|---|
[Deoxyribonucleic acid sequence effects on molecular structure].
Topics: Adenine; Base Sequence; DNA; Inosine; Magnetic Resonance Spectroscopy; Molecular Sequence Data; Molecular Structure; Oligonucleotides; X-Ray Diffraction | 1989 |
Molecular dynamic simulations of environment and sequence dependent DNA conformations: the development of the BMS nucleic acid force field and comparison with experimental results.
Topics: Adenine; Computer Simulation; Crystallography, X-Ray; Cytosine; Deoxyribose; DNA; Guanine; Magnetic Resonance Spectroscopy; Models, Chemical; Molecular Conformation; Oligonucleotides; Organophosphates; Thymine | 1998 |
Fluorescent pteridine nucleoside analogs: a window on DNA interactions.
Topics: Adenine; Anisotropy; DNA; Fluorescent Dyes; Guanosine; Models, Chemical; Oligonucleotides; Pteridines; Spectrometry, Fluorescence; Temperature; Time Factors | 2001 |
Synthesis of chemically modified DNA.
Topics: Adenine; Cytosine; DNA; DNA Ligases; DNA-Directed DNA Polymerase; Guanine; Oligonucleotides; Polymerase Chain Reaction; Thymine | 2016 |
1 trial(s) available for adenine and oligonucleotides
| Article | Year |
|---|---|
Adding adefovir vs. switching to entecavir for lamivudine-resistant chronic hepatitis B (ACE study): a 2-year follow-up randomized controlled trial.
Topics: Adenine; Adult; Analysis of Variance; Antiviral Agents; DNA, Viral; Drug Resistance, Viral; Female; Follow-Up Studies; Guanine; Hepatitis B; Hepatitis B, Chronic; Humans; Immunoassay; Lamivudine; Male; Middle Aged; Oligonucleotides; Organophosphonates; Prospective Studies; Republic of Korea; Reverse Transcriptase Inhibitors; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Treatment Outcome | 2013 |
221 other study(ies) available for adenine and oligonucleotides
| Article | Year |
|---|---|
Effects of Poly(1-vinyluracil) and Poly(9-vinyladenine) on viral RNA-directed DNA polymerase.
Topics: Adenine; In Vitro Techniques; Moloney murine leukemia virus; Oligodeoxyribonucleotides; Oligonucleotides; Poly A; Poly C; Poly U; Polyvinyls; Reverse Transcriptase Inhibitors; RNA-Directed DNA Polymerase; Templates, Genetic; Thymidine Monophosphate; Uracil | 1976 |
The mode of Mg++ binding to oligonucleotides. Inner sphere complexes as markers for recognition?
Topics: Adenine; Chemical Phenomena; Chemistry; Circular Dichroism; Kinetics; Magnesium; Mathematics; Nucleic Acid Conformation; Oligonucleotides; Oligoribonucleotides; Spectrophotometry, Ultraviolet | 1979 |
Oligo (A) oligo (A)-adjacent sequences present in nuclear ribonucleoprotein complexes and mRNA.
Topics: Adenine; Animals; Base Sequence; Cell Nucleus; Cytoplasm; Kinetics; Mice; Neoplasms, Experimental; Nucleic Acid Hybridization; Nucleoproteins; Oligonucleotides; Oligoribonucleotides; Pancreas; Poly A; Ribonuclease T1; Ribonucleoproteins; RNA, Messenger | 1976 |
Synthesis of VA RNA in productive and abortive infections with adenovirus type 12.
Topics: Adenine; Adenoviridae; Cell Line; Cytosine; Guanine; Oligonucleotides; RNA; RNA, Viral; Uracil | 1976 |
[Oligonucleotides of human thrombocytes and their participation in the release reaction induced by thrombin].
Topics: Adenine; Blood Coagulation; Blood Platelets; Cytosine; Guanine; Humans; Oligonucleotides; Thrombin; Uracil | 1975 |
The methylated constituents of L cell messenger RNA: evidence for an unusual cluster at the 5' terminus.
Topics: Adenine; Adenosine; Alkaline Phosphatase; Animals; Base Sequence; Chromatography, Ion Exchange; L Cells; Methionine; Methylation; Mice; Nucleotides; Nucleotidyltransferases; Oligonucleotides; Polyribosomes; RNA, Messenger; Uridine | 1975 |
Role of apurinic sites in the resistance of methylated oligodeoxyribonucleotides to degradation by spleen exonuclease.
Topics: Adenine; Binding Sites; Binding, Competitive; Chromatography, Gel; Chromatography, Paper; DNA; Exonucleases; Guanine; Kinetics; Methylation; Oligodeoxyribonucleotides; Oligonucleotides; Spleen; Time Factors | 1975 |
RNA substrate binding site in the catalytic core of the Tetrahymena ribozyme.
Topics: Adenine; Animals; Base Sequence; Binding Sites; Catalysis; Guanosine; Hydrogen Bonding; Introns; Methylation; Molecular Sequence Data; Mutagenesis; Nucleic Acid Conformation; Oligonucleotides; RNA; RNA, Catalytic; Substrate Specificity; Tetrahymena thermophila; Thermodynamics | 1992 |
A (CA)n dinucleotide repeat assay for evaluating loss of allelic heterozygosity in small and archival human brain tumor specimens.
Topics: Adenine; Astrocytoma; Brain Neoplasms; Chromosome Deletion; Cytidine; DNA, Neoplasm; Glioma; Heterozygote; Humans; Oligonucleotides; Polymerase Chain Reaction; Polymorphism, Genetic; Repetitive Sequences, Nucleic Acid | 1992 |
DNA interstrand cross-linking, DNA sequence specificity, and induced conformational changes produced by a dimeric analog of (+)-CC-1065.
Topics: Adenine; Antibiotics, Antineoplastic; Base Sequence; Copper; Cross-Linking Reagents; DNA; DNA Damage; DNA Fingerprinting; Duocarmycins; Electrophoresis; Hydroxides; Hydroxyl Radical; Indoles; Leucomycins; Molecular Sequence Data; Nucleic Acid Conformation; Oligonucleotides; Phenanthrolines; Structure-Activity Relationship; Urea | 1991 |
Thermodynamics of DNA duplexes with adjacent G.A mismatches.
Topics: Adenine; Base Composition; Base Sequence; DNA; Guanine; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Nucleic Acid Heteroduplexes; Oligonucleotides; Temperature; Thermodynamics | 1991 |
Site-specific intercalation at the triplex-duplex junction induces a conformational change which is detectable by hypersensitivity to diethylpyrocarbonate.
Topics: Acridines; Adenine; Base Sequence; Diethyl Pyrocarbonate; DNA; Molecular Sequence Data; Nucleic Acid Conformation; Nucleotide Mapping; Oligonucleotides; Purines; Pyrimidines; Spectrophotometry, Ultraviolet; Sulfuric Acid Esters | 1991 |
Transforming activity of a synthetic c-Ha-ras gene containing O6-methylguanine in codon 12.
Topics: 3T3 Cells; Adenine; Amino Acid Sequence; Animals; Base Sequence; Cell Transformation, Neoplastic; Codon; Genes, ras; Genes, Synthetic; Genetic Vectors; Guanine; Humans; Mice; Molecular Sequence Data; Mutagenesis, Insertional; Mutation; Oligonucleotides; Transfection | 1991 |
A.T and C.C+ base pairs can form simultaneously in a novel multistranded DNA complex.
Topics: Adenine; Base Composition; Base Sequence; Centrifugation; Circular Dichroism; Cytosine; DNA; Molecular Sequence Data; Molecular Structure; Nucleic Acid Conformation; Oligonucleotides; Polynucleotides; Thymine | 1990 |
The GTm6AC sequence is overwound and bent.
Topics: Adenine; Base Composition; Base Sequence; Carbohydrate Conformation; Magnetic Resonance Spectroscopy; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Site-Specific DNA-Methyltransferase (Adenine-Specific) | 1989 |
Effects of functional group changes in the EcoRV recognition site on the cleavage reaction catalyzed by the endonuclease.
Topics: Adenine; Base Composition; Base Sequence; Binding Sites; Chromatography, High Pressure Liquid; Deoxyribonucleases, Type II Site-Specific; Enzyme Stability; Hydrolysis; Isotope Labeling; Kinetics; Oligonucleotides; Peptide Fragments; Thermodynamics; Thymine | 1989 |
Measurement of the radiosensitivity of a radiation-induced adenine defect in a single stranded DNA chain.
Topics: Adenine; DNA, Single-Stranded; Electronic Data Processing; Electrophoresis, Polyacrylamide Gel; Gamma Rays; Oligonucleotides; Radiation Tolerance | 1989 |
The left-handed Z-DNA conformation in oligodeoxynucleotides containing different amounts of AT base pairs: a far UV circular dichroism study.
Topics: Adenine; Base Composition; Base Sequence; Circular Dichroism; DNA; Nucleic Acid Conformation; Oligonucleotides; Spectrophotometry, Ultraviolet; Thermodynamics; Thymidine | 1989 |
Demonstration of the asymmetric effect of CC-1065 on local DNA structure using a site-directed adduct in a 117-base-pair fragment from M13mp1.
Topics: Adenine; Deoxyribonuclease I; DNA Restriction Enzymes; Duocarmycins; Indoles; Leucomycins; Nucleic Acid Conformation; Oligonucleotides | 1987 |
Analysis of sequences from the extremely A + T-rich genome of Plasmodium falciparum.
Topics: Adenine; Animals; Base Composition; Base Sequence; Codon; Dinucleoside Phosphates; Genes; Oligonucleotides; Plasmodium falciparum; Thymine | 1987 |
NMR studies of A.C mismatches in DNA dodecanucleotides at acidic pH. Wobble A(anti).C(anti) pair formation.
Topics: Adenine; Cytidine; Hydrogen-Ion Concentration; Magnetic Resonance Spectroscopy; Models, Molecular; Oligonucleotides | 1987 |
Selective chemical methylation of yeast alanine transfer RNA.
Topics: Adenine; Alanine; Alkaline Phosphatase; Base Sequence; Carbon Isotopes; Chromatography, DEAE-Cellulose; Chromatography, Thin Layer; Coliphages; Countercurrent Distribution; Drug Stability; Kinetics; Methylation; Nucleic Acid Conformation; Nucleosides; Oligonucleotides; Phosphoric Diester Hydrolases; Ribonucleases; RNA, Transfer; Saccharomyces cerevisiae; Spectrophotometry, Ultraviolet; Sulfuric Acids; Transfer RNA Aminoacylation; Tritium | 1972 |
Polyadenylic acid sequences in yeast messenger ribonucleic acid.
Topics: Adenine; Adenine Nucleotides; Base Sequence; Carbon Isotopes; Cellulose; Chemical Phenomena; Chemistry; Electrophoresis, Polyacrylamide Gel; Kinetics; Nucleic Acid Hybridization; Oligonucleotides; Polynucleotides; Polyribosomes; RNA, Messenger; RNA, Ribosomal; Saccharomyces cerevisiae; Species Specificity; Spheroplasts; Thymine Nucleotides; Tritium; Ultracentrifugation; Uridine | 1973 |
X-ray inactivation of the Escherichia coli deoxyribonucleic acid dependent ribonucleic acid polymerase in aqueous solution. II. Studies on initiation and fidelity of transcription.
Topics: Adenine; Adenosine Triphosphate; Carbon Isotopes; DNA-Directed RNA Polymerases; DNA, Bacterial; Dose-Response Relationship, Radiation; Escherichia coli; Guanosine Triphosphate; Micrococcus; Oligonucleotides; Peptide Chain Initiation, Translational; Poly U; Polymers; Polynucleotides; Radiation Effects; RNA, Bacterial; Solutions; Transcription, Genetic; Tritium; Water | 1973 |
The relationship between mismatched base pairs and the thermal stability of DNA duplexes. I. Effects of depurination and chain scission.
Topics: Adenine; Base Sequence; Binding Sites; Carbon Isotopes; Chromatography; Chromatography, Gel; Chromatography, Thin Layer; DNA, Bacterial; Drug Stability; Escherichia coli; Filtration; Guanine; Hot Temperature; Hydroxyapatites; Kinetics; Nucleic Acid Denaturation; Nucleic Acid Hybridization; Nucleic Acid Renaturation; Oligonucleotides | 1973 |
Ribosomal ribonucleic acid-adenine (N 6 -) methylase of Escherichia coli strain B: ionic and substrate site requirements.
Topics: Adenine; Base Sequence; Chromatography, DEAE-Cellulose; Dimethyl Sulfoxide; Escherichia coli; Kinetics; Methylation; Methyltransferases; Micrococcus; Molecular Weight; Oligonucleotides; Protein Binding; Proteus vulgaris; Purines; RNA, Ribosomal; Tritium; Vibrio | 1973 |
Length heterogeneity in the poly (adenylic acid) region of yeast messenger ribonucleic acid.
Topics: Adenine; Adenine Nucleotides; Base Sequence; Carbon Radioisotopes; Centrifugation, Density Gradient; Chromatography, Affinity; Electrophoresis, Polyacrylamide Gel; Formamides; Molecular Weight; Oligonucleotides; Ribonucleotides; RNA, Messenger; RNA, Ribosomal; Saccharomyces cerevisiae; Spectrophotometry, Ultraviolet; Spheroplasts; Tritium | 1974 |
The synthesis of RNA which binds to oligo(dT)-cellulose by brain in vivo and in vitro.
Topics: Adenine; Age Factors; Animals; Brain; Cellulose; Centrifugation, Density Gradient; Cerebral Cortex; Chemical Phenomena; Chemistry; Cytidine; In Vitro Techniques; Male; Oligonucleotides; Rats; RNA; Thymidine; Tritium | 1972 |
Structure of an inducibly methylatable nucleotide sequence in 23S ribosomal ribonucleic acid from erythromycin-resistant Staphylococcus aureus.
Topics: Adenine; Base Sequence; Carbon Isotopes; Chromatography, Paper; Dimethylamines; Drug Resistance, Microbial; Erythromycin; Methylation; Oligonucleotides; Pancreas; Phenotype; Ribonucleases; Ribonucleotides; RNA, Bacterial; RNA, Ribosomal; Staphylococcus; Tritium | 1973 |
Stability of RNA hairpin loops: A 6 -C m -U 6 .
Topics: Adenine; Base Sequence; Chromatography; Circular Dichroism; Cytosine; Models, Biological; Nucleic Acid Conformation; Oligonucleotides; RNA; Spectrophotometry; Thermodynamics; Uracil | 1973 |
Free energy of imperfect nucleic acid helices. II. Small hairpin loops.
Topics: Adenine; Base Sequence; Binding Sites; Guanine; Hot Temperature; Molecular Weight; Nucleic Acid Conformation; Oligonucleotides; RNA; Thermodynamics; Uracil | 1973 |
Pyrimidine tracts of the (A + T)-rich satellite DNA from Cancer pagurus.
Topics: Adenine; Animals; Brachyura; Centrifugation, Density Gradient; Chromatography, DEAE-Cellulose; Chromatography, Gel; Cytidine; DNA; Male; Oligonucleotides; Spectrophotometry, Ultraviolet; Testis; Thymine | 1973 |
Synthesis of deoxyoligonucleotides containing 7-deazaadenine: recognition and cleavage by restriction endonuclease Bgl II and Sau 3AI (nucleosides and nucleotides Part 55).
Topics: Adenine; Bacterial Proteins; Base Sequence; Deoxyribonucleases, Type II Site-Specific; DNA Restriction Enzymes; Indicators and Reagents; Kinetics; Oligodeoxyribonucleotides; Oligonucleotides; Phosphorus Radioisotopes; Structure-Activity Relationship; Substrate Specificity | 1984 |
Kinetics for exchange of imino protons in the d(C-G-C-G-A-A-T-T-C-G-C-G) double helix and in two similar helices that contain a G . T base pair, d(C-G-T-G-A-A-T-T-C-G-C-G), and an extra adenine, d(C-G-C-A-G-A-A-T-T-C-G-C-G).
Topics: Adenine; Guanine; Kinetics; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; Protons; Thymidine | 1982 |
The photoreactivity of T-A sequences in oligodeoxyribonucleotides and DNA.
Topics: Adenine; Animals; Cattle; DNA; Oligodeoxyribonucleotides; Oligonucleotides; Photolysis; Poly dA-dT; Polydeoxyribonucleotides; Spectrophotometry, Ultraviolet; Structure-Activity Relationship; Thymine; Thymus Gland; Ultraviolet Rays | 1984 |
Detection of a guanine X adenine base pair in a decadeoxyribonucleotide by proton magnetic resonance spectroscopy.
Topics: Adenine; Base Composition; Guanine; Hydrogen Bonding; Magnetic Resonance Spectroscopy; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides | 1983 |
Fluorescence decay studies of modified dinucleoside monophosphates containing 1-N6-ethenoadenosine.
Topics: Adenine; Dinucleoside Phosphates; Nucleic Acid Conformation; Oligonucleotides; Spectrometry, Fluorescence; Structure-Activity Relationship | 1983 |
AT base pairs are less stable than GC base pairs in Z-DNA: the crystal structure of d(m5CGTAm5CG).
Topics: Adenine; Base Composition; Cytosine; DNA; Drug Stability; Guanine; Models, Molecular; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; Thymine | 1984 |
Studies on interactions between immobilized lysine residues and oligomers of thymidylic and deoxyadenylic acids.
Topics: Adenine; Animals; DNA; Fishes; Lysine; Male; Oligodeoxyribonucleotides; Oligonucleotides; Oligopeptides; Oligoribonucleotides; Protein Binding; Spermatozoa; Structure-Activity Relationship; Thymine | 1980 |
High-resolution NMR studies of A- and G-containing oligonucleotides.
Topics: Adenine; Guanine; Magnetic Resonance Spectroscopy; Nucleic Acid Conformation; Oligonucleotides; Oligoribonucleotides; Structure-Activity Relationship | 1983 |
Temperature-jump kinetics of the dC-G-T-G-A-A-T-T-C-G-C-G double helix containing a G . T base pair and the dC-G-C-A-G-A-A-T-T-C-G-C-G double helix containing an extra adenine.
Topics: Adenine; Kinetics; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; Structure-Activity Relationship; Temperature | 1983 |
Conformational analysis of a ribopentanucleoside tetraphosphate in aqueous solution. A two-dimensional NMR study at 500 MHz.
Topics: Adenine; Magnetic Resonance Spectroscopy; Nucleic Acid Conformation; Oligonucleotides; Oligoribonucleotides; Uracil | 1983 |
Fluorescence studies of polyriboadenylic acid and dinucleoside monophosphates containing 1,N6-ethenoadenosine.
Topics: Adenine; Dinucleoside Phosphates; Nucleic Acid Conformation; Oligonucleotides; Poly A; Spectrometry, Fluorescence; Structure-Activity Relationship | 1982 |
Intramolecular interaction of thymine and adenine bases in synthetic oligo- and polynucleotide models.
Topics: Adenine; Hydrogen-Ion Concentration; Kinetics; Magnetic Resonance Spectroscopy; Nucleic Acid Conformation; Oligonucleotides; Polynucleotides; Spectrophotometry, Ultraviolet; Structure-Activity Relationship; Thymine | 1982 |
Complete assignment and conformational analysis of a deoxyribotetranucleotide. d(TAAT). A 360 and 500 Mhz NMR study.
Topics: Adenine; Deoxyribose; Magnetic Resonance Spectroscopy; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; Thymine | 1981 |
Nearest-neighbor and next-nearest-neighbor effects in the proton NMR spectra of the oligoribonucleotides ApGpX and CpApX.
Topics: Adenine; Chemical Phenomena; Chemistry, Physical; Cytosine; Guanine; Magnetic Resonance Spectroscopy; Oligonucleotides; Oligoribonucleotides; Protons; Spectrum Analysis; Temperature; Uracil | 1980 |
Mutagenicity of 5-bromouracil and N6-hydroxyadenine studied by yeast oligonucleotide transformation assay.
Topics: Adenine; Amino Acid Sequence; Base Sequence; Bromouracil; Molecular Sequence Data; Mutagenicity Tests; Oligonucleotides; Polymerase Chain Reaction; Saccharomyces cerevisiae; Transformation, Genetic | 1994 |
Exact vs approximate methods for simulation of 3D NOE-NOE spectra.
Topics: Adenine; Algorithms; Amino Acid Sequence; Computer Simulation; Energy Transfer; Guanine; Magnetic Resonance Spectroscopy; Magnetics; Models, Chemical; Nucleotide Mapping; Oligonucleotides | 1995 |
The reactivity of 4,5',8-trimethylpsoralen with oligonucleotides containing AT sites.
Topics: Adenine; Base Sequence; Molecular Sequence Data; Oligonucleotides; Photochemistry; Thymine; Trioxsalen | 1994 |
8-Methoxypsoralen photoadduct formation in complementary oligonucleotides containing a cross-linkable site.
Topics: Adenine; Base Composition; Chromatography, High Pressure Liquid; Cross-Linking Reagents; Cytosine; DNA Adducts; Guanine; Light; Methoxsalen; Oligonucleotides; Photosensitizing Agents; Thymine; Tritium; Ultraviolet Rays | 1995 |
Acyclic oligonucleotide analogues.
Topics: Adenine; Adenine Nucleotides; Circular Dichroism; Deoxyribonucleotides; DNA Polymerase I; DNA Primers; Drug Stability; Glycerol; Models, Molecular; Oligonucleotides; Phosphatidic Acids; Phosphoric Diester Hydrolases; Snake Venoms; Temperature; Thymidine; Thymine; Thymine Nucleotides | 1995 |
Iontophoresis of bases, nucleosides, and nucleotides.
Topics: Adenine; Adenosine Monophosphate; Adenosine Triphosphate; Animals; Diffusion; Drug Delivery Systems; Guanosine Triphosphate; Hydrogen-Ion Concentration; In Vitro Techniques; Iontophoresis; Kinetics; Mice; Mice, Hairless; Molecular Weight; Nucleosides; Nucleotides; Oligonucleotides; Skin Absorption; Uracil | 1996 |
NMR investigation of echinomycin binding to d(ACGTTAACGT)2: Hoogsteen versus Watson-Crick A.T base pairing between echinomycin binding sites.
Topics: Adenine; Base Composition; Base Sequence; Binding Sites; DNA-Binding Proteins; Echinomycin; Magnetic Resonance Spectroscopy; Molecular Sequence Data; Molecular Structure; Oligonucleotides; TATA Box; Thymine | 1995 |
Novel mutation (K70E) in human immunodeficiency virus type 1 reverse transcriptase confers decreased susceptibility to 9-[2-(phosphonomethoxy)ethyl]adenine in vitro.
Topics: Adenine; Antiviral Agents; Genotype; HIV Reverse Transcriptase; HIV-1; Humans; Kinetics; Oligonucleotides; Organophosphonates; Reverse Transcriptase Inhibitors; Virus Replication | 1996 |
Styrene oxide DNA adducts: in vitro reaction and sensitive detection of modified oligonucleotides using capillary zone electrophoresis interfaced to electrospray mass spectrometry.
Topics: Adenine; Animals; DNA; DNA Adducts; Electrophoresis, Capillary; Epoxy Compounds; In Vitro Techniques; Mass Spectrometry; Oligonucleotides | 1997 |
Bi-stranded, multisite replication of a base pair between difluorotoluene and adenine: confirmation by 'inverse' sequencing.
Topics: Adenine; Adenosine Triphosphate; DNA Primers; DNA Replication; Nucleotides; Oligonucleotides; Sequence Analysis, DNA; Templates, Genetic; Toluene | 1997 |
Opposite base-dependent excision of 7,8-dihydro-8-oxoadenine by the Ogg1 protein of Saccharomyces cerevisiae.
Topics: 5-Methylcytosine; Adenine; Bacterial Proteins; Cytosine; DNA; DNA Glycosylases; DNA Repair; DNA-Formamidopyrimidine Glycosylase; Escherichia coli; Escherichia coli Proteins; Fungal Proteins; Humans; N-Glycosyl Hydrolases; Oligonucleotides; Purines; Pyridines; Saccharomyces cerevisiae | 1998 |
Molecular dynamics simulations of an oligonucleotide duplex with adenine tracts phased by a full helix turn.
Topics: Adenine; Algorithms; Computer Simulation; Deoxyribonuclease BamHI; DNA; DNA Footprinting; Magnesium; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides | 1998 |
Single-turnover and pre-steady-state kinetics of the reaction of the adenine glycosylase MutY with mismatch-containing DNA substrates.
Topics: Adenine; Base Pair Mismatch; Base Pairing; Binding Sites; Deoxyguanosine; DNA; DNA Glycosylases; DNA Repair; Guanine; Kinetics; N-Glycosyl Hydrolases; Oligonucleotides; Substrate Specificity; Titrimetry | 1998 |
Correlation between sequence-dependent glycosylase repair and the thermal stability of oligonucleotide duplexes containing 1, N6-ethenoadenine.
Topics: Adenine; Animals; Base Sequence; DNA Glycosylases; HeLa Cells; Humans; Mice; N-Glycosyl Hydrolases; Oligonucleotides; Thermodynamics | 1998 |
UV spectroscopy study on complexes of phosphonate ApA analogs with poly(U): promising step in prediction of oligonucleotide analog properties?
Topics: Adenine; Dinucleoside Phosphates; Kinetics; Molecular Structure; Nucleic Acid Conformation; Oligonucleotides; Organophosphonates; Poly U; Spectrophotometry, Ultraviolet; Structure-Activity Relationship; Thermodynamics | 1998 |
Triple helix formation: binding avidity of acridine-conjugated AG motif third strands containing natural, modified and surrogate bases opposed to pyrimidine interruptions in a polypurine target.
Topics: Acridines; Adenine; Gene Expression Regulation; Genetic Techniques; Guanine; Intercalating Agents; Kinetics; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Purines; Pyrimidines; Pyrroles | 1999 |
Effect of base analog substitutions in the specific GATC site on binding and methylation of oligonucleotide duplexes by the bacteriophage T4 Dam DNA-[N6-adenine] methyltransferase.
Topics: 2-Aminopurine; Adenine; Bacteriophage T4; Binding Sites; DNA Methylation; Guanine; Kinetics; Mutagenesis, Site-Directed; Oligonucleotides; Purines; Site-Specific DNA-Methyltransferase (Adenine-Specific); Viral Proteins | 1999 |
Incision at nucleotide insertions/deletions and base pair mismatches by the SP nuclease of spinach.
Topics: Adenine; Base Pair Mismatch; Base Sequence; DNA Repair; Endonucleases; Hydrogen-Ion Concentration; Molecular Sequence Data; Oligonucleotides; Osmolar Concentration; Plant Proteins; Sequence Deletion; Spinacia oleracea; Substrate Specificity; Thymine | 1999 |
The major, N2-dG adduct of (+)-anti-B[a]PDE induces G-->A mutations in a 5'-AGA-3' sequence context.
Topics: Adenine; Amino Acid Substitution; Benzo(a)pyrene; Cells, Cultured; Chromatography, High Pressure Liquid; Guanine; Mutagens; Mutation, Missense; Oligonucleotides; Plasmids; SOS Response, Genetics | 1999 |
Stabilization of the i-motif by intramolecular adenine-adenine-thymine base triple in the structure of d(ACCCT).
Topics: Adenine; Crystallography, X-Ray; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Thymine | 1999 |
Double duplex invasion by peptide nucleic acid: a general principle for sequence-specific targeting of double-stranded DNA.
Topics: Adenine; Base Sequence; DNA; Magnetic Resonance Spectroscopy; Models, Genetic; Molecular Sequence Data; Nucleic Acids; Oligonucleotides; Peptide Nucleic Acids; Peptides; Purines; Thiouracil; Transcription, Genetic | 1999 |
Substrate specificity of human methylpurine DNA N-glycosylase.
Topics: Adenine; Binding, Competitive; DNA; DNA Glycosylases; DNA Repair; Guanine; Guanosine; Humans; Hypoxanthine; Kinetics; N-Glycosyl Hydrolases; Oligonucleotides; Recombinant Proteins; Substrate Specificity | 2000 |
The preparation, characterisation, and DNA adduct profile of 2-amino-2-methyl-3-butanoneoximedichloroplatinum(II), a platinum(II) complex designed to bind to GpA sequences of DNA.
Topics: Adenine; Binding Sites; Biochemical Phenomena; Chromatography, High Pressure Liquid; Cisplatin; Crystallography; DNA; DNA Adducts; Enzymes; Hydrogen Bonding; Molecular Structure; Oligonucleotides; Organoplatinum Compounds; Reference Standards | 2000 |
Affinity NMR: decoding DNA binding.
Topics: Adenine; Adenosine; DNA; Ligands; Magnetic Resonance Spectroscopy; Oligonucleotides; Spectrum Analysis; Thiamine | 1999 |
Sensitivity of human type II topoisomerases to DNA damage: stimulation of enzyme-mediated DNA cleavage by abasic, oxidized and alkylated lesions.
Topics: Adenine; Alkylation; Apurinic Acid; Base Sequence; DNA; DNA Adducts; DNA Damage; DNA Repair; DNA Topoisomerases, Type II; DNA-Binding Proteins; Guanine; Humans; Isoenzymes; Mutation; Oligonucleotides; Oxidation-Reduction; Plasmids; Sensitivity and Specificity | 2000 |
Accumulation of adenine DNA glycosylase-sensitive sites in human mitochondrial DNA.
Topics: Adenine; DNA Glycosylases; DNA-Formamidopyrimidine Glycosylase; DNA, Mitochondrial; Electron Transport; Guanosine; HeLa Cells; Humans; N-Glycosyl Hydrolases; Oligonucleotides | 2000 |
Synthesis and characterization of oligonucleotides containing site-specific bulky N2-aralkylated guanines and N6-aralkylated adenines.
Topics: Adenine; Alkylation; Benzyl Compounds; Chromatography, High Pressure Liquid; DNA Adducts; Guanine; Mutagenesis, Site-Directed; Mutagens; Nucleosides; Oligonucleotides; Spectrometry, Mass, Fast Atom Bombardment; Spectrophotometry, Ultraviolet | 2000 |
RNA aptamers to S-adenosylhomocysteine: kinetic properties, divalent cation dependency, and comparison with anti-S-adenosylhomocysteine antibody.
Topics: Adenine; Antibodies, Monoclonal; Base Sequence; Binding Sites; Binding, Competitive; Biosensing Techniques; Cations, Divalent; Chromatography, Affinity; Cystathionine; Gene Library; Kinetics; Models, Molecular; Molecular Sequence Data; Molecular Structure; Nucleic Acid Conformation; Oligonucleotides; RNA; S-Adenosylhomocysteine; S-Adenosylmethionine | 2000 |
Gelonin is an unusual DNA glycosylase that removes adenine from single-stranded DNA, normal base pairs and mismatches.
Topics: Adenine; Base Pair Mismatch; Carbon-Oxygen Lyases; Deoxyribonuclease IV (Phage T4-Induced); DNA; DNA Glycosylases; DNA Repair; DNA-(Apurinic or Apyrimidinic Site) Lyase; DNA, Single-Stranded; Dose-Response Relationship, Drug; Electrophoresis, Polyacrylamide Gel; Hydrogen-Ion Concentration; Kinetics; Mercaptoethanol; N-Glycosyl Hydrolases; Oligonucleotides; Plant Proteins; Ribosome Inactivating Proteins, Type 1; Time Factors; Zinc | 2000 |
Products from polycrystalline DNA constituents after X-irradiation and heavy-ion bombardment: formation of the 5,6-dihydroadduct in thymidine 5'-monophosphate and release of unaltered bases in nucleotides.
Topics: Adenine; Chromatography, High Pressure Liquid; Cytosine; DNA; DNA Adducts; Dose-Response Relationship, Radiation; Guanine; Heavy Ions; Magnetic Resonance Spectroscopy; Models, Chemical; Oligonucleotides; Thymidine Monophosphate; X-Rays | 2000 |
HMG-domain protein recognition of cisplatin 1,2-intrastrand d(GpG) cross-links in purine-rich sequence contexts.
Topics: Adenine; Base Sequence; Cisplatin; Deoxyguanosine; Dinucleoside Phosphates; DNA Adducts; DNA Probes; Guanine; High Mobility Group Proteins; Mutagenesis, Site-Directed; Nucleic Acid Heteroduplexes; Oligonucleotides; Protein Binding; Protein Structure, Tertiary; Recombinant Proteins | 2000 |
Detection of competing DNA structures by thermal gradient gel electrophoresis: from self-association to triple helix formation by (G,A)-containing oligonucleotides.
Topics: Adenine; Base Sequence; Binding, Competitive; DNA; Electrophoresis, Polyacrylamide Gel; Guanine; Magnesium; Nucleic Acid Denaturation; Oligonucleotides; Spectrophotometry, Ultraviolet; Temperature; Thermodynamics | 2001 |
Minor groove functional groups are critical for the B-form conformation of duplex DNA.
Topics: Adenine; Circular Dichroism; DNA; Humidity; Nucleic Acid Conformation; Nucleic Acid Denaturation; Nucleic Acid Heteroduplexes; Oligonucleotides; Poly dA-dT; Pyridones; Salts; Sodium Chloride; Spectrophotometry, Ultraviolet; Structure-Activity Relationship; Thermodynamics; Thionucleotides; Trifluoroethanol | 2001 |
Anti-gene effect in live cells of AG motif triplex-forming oligonucleotides containing an increasing number of phosphorothioate linkages.
Topics: Adenine; Animals; Base Sequence; Cell Line; Chloramphenicol O-Acetyltransferase; Dinucleotide Repeats; DNA; DNA Footprinting; Electrophoresis, Polyacrylamide Gel; Genes, ras; Genes, Reporter; Guanine; Humans; Mice; Molecular Sequence Data; Nucleic Acid Conformation; Oligonucleotides; Promoter Regions, Genetic; Single-Strand Specific DNA and RNA Endonucleases; Stereoisomerism; Suppression, Genetic; Thionucleotides; Transfection | 2001 |
The adenine derivative of alpha-L-LNA (alpha-L-ribo configured locked nucleic acid): synthesis and high-affinity hybridization towards DNA, RNA, LNA and alpha-L-LNA complementary sequences.
Topics: Adenine; DNA; DNA, Complementary; Molecular Conformation; Nucleic Acid Hybridization; Oligonucleotides; RNA | 2001 |
Synthesis and characterization of nucleosides and oligonucleotides bearing adducts of butadiene epoxides on adenine n(6) and guanine n(2).
Topics: Adenine; Base Sequence; Circular Dichroism; Epoxy Compounds; Guanine; Mass Spectrometry; Nuclear Magnetic Resonance, Biomolecular; Nucleosides; Oligonucleotides | 2001 |
Importance of specific nucleotides in the folding of the natural form of the hairpin ribozyme.
Topics: 2-Aminopurine; Adenine; Base Composition; Base Sequence; Carbocyanines; Cytosine; Deoxyribonucleosides; Energy Transfer; Fluorescein; Fluorescent Dyes; Guanine; Hydrolysis; Molecular Sequence Data; Nepovirus; Nucleic Acid Conformation; Oligonucleotides; Point Mutation; Purine Nucleotides; Ribose; RNA, Catalytic; Spectrometry, Fluorescence; Uridine | 2001 |
Isolation and mass spectrometric characterization of dimeric adenine photoproducts in oligodeoxynucleotides.
Topics: Adenine; Chromatography, High Pressure Liquid; Dimerization; DNA Adducts; Humans; Mass Spectrometry; Oligonucleotides; Photochemistry; Ultraviolet Rays | 2001 |
The nonmutagenic (R)- and (S)-beta-(N(6)-adenyl)styrene oxide adducts are oriented in the major groove and show little perturbation to DNA structure.
Topics: Adenine; Computer Simulation; DNA; DNA Adducts; Electrophoresis, Capillary; Hydrogen Bonding; Hydrogen-Ion Concentration; Models, Chemical; Models, Molecular; Oligonucleotides; Spectrophotometry; Styrene; Ultraviolet Rays | 2001 |
Mineral catalysis of the formation of the phosphodiester bond in aqueous solution: the possible role of montmorillonite clays.
Topics: Adenine; Bentonite; Biopolymers; Catalysis; Cations; Evolution, Molecular; Minerals; Nucleotides; Oligonucleotides; Origin of Life; RNA; Sodium; Uracil | 1989 |
Nonenzymatic template-directed synthesis on hairpin oligonucleotides. 3. Incorporation of adenosine and uridine residues.
Topics: Adenine; Adenosine; Base Composition; Base Sequence; Cytidine Monophosphate; Cytosine; Guanine; Guanosine Monophosphate; Molecular Sequence Data; Oligonucleotides; Polymers; Templates, Genetic; Thymidine; Thymine; Uridine | 1992 |
Adenine derivatives as phosphate-activating groups for the regioselective formation of 3',5'-linked oligoadenylates on montmorillonite: possible phosphate-activating groups for the prebiotic synthesis of RNA.
Topics: 4-Aminopyridine; Adenine; Adenosine; Adenosine Monophosphate; Bentonite; Chromatography, High Pressure Liquid; Chromatography, Thin Layer; Evolution, Molecular; Magnetic Resonance Spectroscopy; Oligonucleotides; Origin of Life; RNA; Uridine Monophosphate | 1997 |
Synthesis and characterization of nucleosides and oligonucleotides with a benzo[a]pyren-6-ylmethyl adduct at adenine N6 or guanine N2.
Topics: Adenine; Benzo(a)pyrene; Benzopyrenes; DNA Adducts; Guanine; Mutagens; Nucleosides; Oligonucleotides; Oxidation-Reduction; Structure-Activity Relationship | 2001 |
Fragmentation of photomodified oligodeoxynucleotides adducted with metal ions in an electrospray-ionization ion-trap mass spectrometer.
Topics: Adenine; DNA Adducts; DNA Fragmentation; Hydrolysis; Metals; Oligonucleotides; Photochemistry; Single-Strand Specific DNA and RNA Endonucleases; Spectrometry, Mass, Electrospray Ionization; Thymine | 2001 |
Influence of an 8-oxoadenine lesion on the structural and dynamic features of a 30-mer DNA fragment with and without a mismatch.
Topics: Adenine; Anisotropy; Base Pair Mismatch; Base Sequence; Circular Dichroism; DNA; DNA Damage; Gamma Rays; Hydrogen-Ion Concentration; Models, Statistical; Molecular Sequence Data; Nucleic Acid Conformation; Oligonucleotides; Oxygen; Protein Conformation; Spectrometry, Fluorescence; Ultraviolet Rays | 2002 |
Parallel and antiparallel G*G.C base triplets in pur*pur.pyr triple helices formed with (GA) third strands.
Topics: Adenine; Base Sequence; Carbohydrate Conformation; Cations, Divalent; Cytosine; DNA; Guanine; Magnesium; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Purines; Pyrimidines; Sodium; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet; Temperature; Trinucleotide Repeats | 2001 |
Selective cross-linking to the adenine of the TA interrupting site within the triple helix.
Topics: Adenine; Base Pairing; Cross-Linking Reagents; Cytosine; Deoxyribose; Indicators and Reagents; Nucleic Acid Denaturation; Oligonucleotides; Purines; Vinyl Compounds | 2002 |
Evidence for a common molecular basis for sequence recognition of N3-guanine and N3-adenine DNA adducts involving the covalent bonding reaction of (+)-CC-1065.
Topics: Adenine; Antibiotics, Antineoplastic; Base Sequence; Catalysis; DNA; DNA Adducts; Duocarmycins; Guanine; Hydrogen Bonding; Hydrogen-Ion Concentration; Indoles; Leucomycins; Magnetic Resonance Spectroscopy; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides | 2002 |
Nonspecific deadenylation on sarcin/ricin domain RNA catalyzed by gelonin under acidic conditions.
Topics: Adenine; Animals; Catalysis; Fungal Proteins; Hydrogen-Ion Concentration; Nucleic Acid Conformation; Oligonucleotides; Plant Proteins; Protein Conformation; Rats; Ribonucleases; Ribosome Inactivating Proteins, Type 1; Ricin; RNA, Ribosomal, 28S; Substrate Specificity | 2002 |
Endogenous DNA lesions can inhibit the binding of the AP-1 (c-Jun) transcription factor.
Topics: Adenine; Base Pair Mismatch; Binding, Competitive; Cytosine; DNA Damage; DNA Glycosylases; DNA-Binding Proteins; Humans; N-Glycosyl Hydrolases; Nucleic Acid Heteroduplexes; Oligonucleotides; Pentoxyl; Protein Binding; Proto-Oncogene Proteins c-jun; Thymine; Transcription Factor AP-1; Uracil; Uracil-DNA Glycosidase | 2002 |
Structural insights by molecular dynamics simulations into differential repair efficiency for ethano-A versus etheno-A adducts by the human alkylpurine-DNA N-glycosylase.
Topics: Adenine; DNA Adducts; DNA Glycosylases; DNA Repair; Humans; Molecular Structure; N-Glycosyl Hydrolases; Oligonucleotides; Protein Structure, Tertiary; Substrate Specificity | 2002 |
A study of fast and metastable dissociations of adenine-thymine binary-base oligonucleotides by using positive-ion MALDI-TOF mass spectrometry.
Topics: Adenine; DNA Fragmentation; Oligonucleotides; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Spectrophotometry, Ultraviolet; Thymine | 2002 |
A dimeric mechanism for contextual target recognition by MutY glycosylase.
Topics: Acrylamides; Adenine; Base Pair Mismatch; Binding Sites; Dimerization; DNA; DNA Damage; DNA Glycosylases; DNA Repair; Electrophoresis, Polyacrylamide Gel; Escherichia coli; Guanine; Models, Chemical; N-Glycosyl Hydrolases; Oligonucleotides; Thermodynamics; Time Factors | 2003 |
Synthesis, incorporation into triplex-forming oligonucleotide, and binding properties of a novel 2'-deoxy-C-nucleoside featuring a 6-(thiazolyl-5)benzimidazole nucleobase.
Topics: Adenine; Base Sequence; Benzimidazoles; DNA; Hydrogen Bonding; Molecular Structure; Nucleic Acid Denaturation; Nucleosides; Oligonucleotides; Temperature; Thymine | 2002 |
Unique hole-trapping property of the degenerate base,2-amino-7-deazaadenine.
Topics: Adenine; Base Pairing; Base Sequence; DNA Damage; Hydrolysis; Oligonucleotides; Oxidation-Reduction | 2002 |
Influence of local duplex stability and N6-methyladenine on uracil recognition by mismatch-specific uracil-DNA glycosylase (Mug).
Topics: Adenine; Base Composition; Base Pair Mismatch; Base Sequence; DNA; DNA Glycosylases; DNA Repair; Drug Stability; Escherichia coli; N-Glycosyl Hydrolases; Nucleic Acid Denaturation; Oligonucleotides; Phosphorus Isotopes; Substrate Specificity; Temperature; Thymine; Uracil; Uracil-DNA Glycosidase | 2002 |
"Action-at-a distance" of a new DNA oxidative damage product 6-furfuryl-adenine (kinetin) on template properties of modified DNA.
Topics: Adenine; Chromatography, Thin Layer; DNA Damage; HIV Long Terminal Repeat; Kinetin; Oligonucleotides; Oxidation-Reduction; Polymerase Chain Reaction; Templates, Genetic | 2003 |
Platinum cross-linking of adenines and guanines on the quadruplex structures of the AG3(T2AG3)3 and (T2AG3)4 human telomere sequences in Na+ and K+ solutions.
Topics: Adenine; Base Sequence; Binding Sites; Cross-Linking Reagents; Electrophoresis, Polyacrylamide Gel; Guanine; Humans; Nucleic Acid Conformation; Oligonucleotides; Platinum; Potassium; Repetitive Sequences, Nucleic Acid; Sodium; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Telomere | 2003 |
HU binding to bent DNA: a fluorescence resonance energy transfer and anisotropy study.
Topics: Adenine; Bacterial Proteins; DNA; DNA-Binding Proteins; Escherichia coli Proteins; Fluorescence Polarization; Fluorescence Resonance Energy Transfer; Nucleic Acid Conformation; Nucleic Acid Heteroduplexes; Oligonucleotides; Protein Binding; Thymine | 2003 |
Mammalian 8-oxoguanine DNA glycosylase 1 incises 8-oxoadenine opposite cytosine in nuclei and mitochondria, while a different glycosylase incises 8-oxoadenine opposite guanine in nuclei.
Topics: Adenine; Animals; Base Pairing; Base Sequence; Cell Line, Transformed; Cell Nucleus; Cytosine; DNA; DNA Repair; DNA-Formamidopyrimidine Glycosylase; Fibroblasts; Guanine; Humans; Liver; Magnesium; Male; Mice; Mice, Inbred C57BL; Mice, Knockout; Mitochondria; N-Glycosyl Hydrolases; Nucleic Acid Conformation; Oligonucleotides; Substrate Specificity | 2003 |
DNA homoduplexes containing no pyrimidine nucleotide.
Topics: Adenine; Base Pairing; Circular Dichroism; DNA; Electrophoresis, Polyacrylamide Gel; Guanine; Nucleic Acid Conformation; Nucleotides; Oligonucleotides; Pyrimidines; Tandem Repeat Sequences; Temperature | 2003 |
Specific alkylation of human telomere repeats by hairpin pyrrole-imidazole polyamide.
Topics: Adenine; Alkylation; Antineoplastic Agents, Alkylating; Cell Division; Cell Line, Tumor; DNA; Humans; Imidazoles; Inhibitory Concentration 50; Nucleic Acid Conformation; Nylons; Oligonucleotides; Pyrroles; Repetitive Sequences, Nucleic Acid; Telomere | 2003 |
Adenine release is fast in MutY-catalyzed hydrolysis of G:A and 8-Oxo-G:A DNA mismatches.
Topics: Adenine; Base Pair Mismatch; Base Sequence; Catalysis; Chromatography; Chromatography, Gel; Crystallography, X-Ray; DNA; DNA Glycosylases; DNA Repair; Escherichia coli; Hydrolysis; Kinetics; Models, Chemical; Models, Molecular; Molecular Sequence Data; N-Glycosyl Hydrolases; Oligonucleotides; Protein Binding; Time Factors | 2003 |
Kinetics of weak distance-dependent hole transfer in DNA by adenine-hopping mechanism.
Topics: Adenine; DNA; Kinetics; Oligonucleotides; Phenothiazines; Photolysis; Pulse Radiolysis | 2003 |
Crystal structure of an RNA.DNA hybrid reveals intermolecular intercalation: dimer formation by base-pair swapping.
Topics: Adenine; Crystallography, X-Ray; Cytosine; Dimerization; DNA; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Purines; RNA | 2003 |
Design of base-discriminating fluorescent nucleoside and its application to t/c SNP typing.
Topics: Adenine; Fluorescent Dyes; Inosine; Nucleosides; Oligonucleotides; Polymorphism, Single Nucleotide; Spectrometry, Fluorescence | 2003 |
Minimal methylated substrate and extended substrate range of Escherichia coli AlkB protein, a 1-methyladenine-DNA dioxygenase.
Topics: Adenine; AlkB Homolog 1, Histone H2a Dioxygenase; Binding, Competitive; DNA Adducts; DNA Methylation; DNA Polymerase I; DNA Repair; DNA Repair Enzymes; Escherichia coli; Escherichia coli Proteins; Humans; Kinetics; Methylation; Mixed Function Oxygenases; Molecular Weight; Nucleotides; Oligonucleotides; Poly A; Substrate Specificity | 2003 |
Oligonucleotides incorporating 8-aza-7-deazapurines: synthesis and base pairing of nucleosides with nitrogen-8 as a glycosylation position.
Topics: Adenine; Aza Compounds; Base Pairing; Base Sequence; Crystallography, X-Ray; Deoxyribonucleosides; Glycosylation; Hydrogen Bonding; Magnetic Resonance Spectroscopy; Molecular Structure; Nitrogen; Nucleic Acid Conformation; Nucleic Acid Denaturation; Nucleic Acid Heteroduplexes; Oligonucleotides; Purines; Temperature; Thermodynamics | 2003 |
METHODS FOR AUTOMATIC NUCLEOTIDE-SEQUENCE ANALYSIS. MULTICOMPONENT SPECTROPHOTOMETRIC ANALYSIS OF MIXTURES OF NUCLEIC ACID COMPONENTS BY A LEAST-SQUARES PROCEDURE.
Topics: Adenine; Adenosine; Biochemical Phenomena; Biochemistry; Computers; Electronic Data Processing; Guanosine; Least-Squares Analysis; Nucleosides; Nucleotides; Oligonucleotides; Research; RNA; Sequence Analysis; Spectrophotometry; Ultraviolet Rays | 1965 |
Complex formation between adenine oligonucleotides and polyuridylic acid.
Topics: Adenine; Nucleosides; Nucleotides; Oligonucleotides; Poly U | 1960 |
GA and AG sequences of DNA react with cisplatin at comparable rates.
Topics: Adenine; Animals; Antineoplastic Agents; Base Sequence; Chelating Agents; Cisplatin; Cross-Linking Reagents; Crotalid Venoms; DNA; DNA Adducts; Exonucleases; Guanine; Kinetics; Nucleic Acid Conformation; Oligonucleotides; Platinum; Sequence Analysis, DNA; Water | 2003 |
Chemical rearrangement and repair pathways of 1,N6-ethenoadenine.
Topics: Adenine; DNA Adducts; DNA Damage; DNA Repair; DNA-Directed DNA Polymerase; DNA, Bacterial; Escherichia coli; Models, Molecular; Mutagens; Oligonucleotides; Saccharomyces cerevisiae | 2003 |
Dissecting the broad substrate specificity of human 3-methyladenine-DNA glycosylase.
Topics: Adenine; Base Pairing; Catalysis; DNA; DNA Glycosylases; Guanine; Humans; Hydrogen-Ion Concentration; Hydrolysis; Kinetics; Models, Chemical; Oligonucleotides; Oxygen; Protein Binding; Protein Conformation; Substrate Specificity; Thermodynamics | 2004 |
An unsubstituted C2 hydrogen of adenine is critical and sufficient at the -11 position of a promoter to signal base pair deformation.
Topics: Adenine; Base Pairing; Base Sequence; DNA; Escherichia coli; Hydrogen; Hydrogen Bonding; Models, Chemical; Molecular Sequence Data; Oligonucleotides; Plasmids; Promoter Regions, Genetic; Transcription, Genetic | 2004 |
The substrate activity of (S)-9-[3-hydroxy-(2-phosphonomethoxy)propyl]adenine diphosphate toward DNA polymerases alpha, delta and epsilon.
Topics: Adenine; Animals; Diphosphates; DNA; DNA-Directed DNA Polymerase; Exonucleases; Kinetics; Molecular Structure; Oligonucleotides; Organophosphonates; Organophosphorus Compounds; Proliferating Cell Nuclear Antigen; Rats; Substrate Specificity; Templates, Genetic | 2004 |
Differential specificities and simultaneous occupancy of human MutSalpha nucleotide binding sites.
Topics: Adenine; Adenosine Diphosphate; Adenosine Triphosphate; Animals; Anisotropy; Base Pair Mismatch; Binding Sites; Biotinylation; Boron Compounds; Cell Line; DNA; DNA Repair; DNA-Binding Proteins; Dose-Response Relationship, Drug; Fluorescence Resonance Energy Transfer; Fluorescent Dyes; Humans; Hydrolysis; Insecta; Kinetics; Microscopy, Fluorescence; MutS Homolog 2 Protein; Oligonucleotides; Protein Binding; Protein Structure, Tertiary; Proto-Oncogene Proteins; Spectrometry, Fluorescence; Substrate Specificity; Surface Plasmon Resonance; Time Factors | 2004 |
The N-glycosidase activity of the ribosome-inactivating protein ME1 targets single-stranded regions of nucleic acids independent of sequence or structural motifs.
Topics: Adenine; Amino Acid Motifs; Chromatography; DNA; Electrophoresis, Polyacrylamide Gel; Hot Temperature; Kinetics; Mirabilis; Models, Genetic; N-Glycosyl Hydrolases; Nucleic Acid Conformation; Nucleic Acids; Oligonucleotides; Peptide-N4-(N-acetyl-beta-glucosaminyl) Asparagine Amidase; Plant Proteins; Protein Structure, Tertiary; Ribosome Inactivating Proteins; Ribosomes; RNA; RNA Caps; RNA, Messenger; RNA, Plant; RNA, Ribosomal; Temperature | 2004 |
Structural evidence of a passive base-flipping mechanism for beta-glucosyltransferase.
Topics: 5-Methylcytosine; Adenine; Asparagine; Aspartic Acid; Binding Sites; Catalysis; Crystallography, X-Ray; Cytosine; DNA; Glucosyltransferases; Kinetics; Models, Molecular; Mutagenesis, Site-Directed; Nucleic Acid Conformation; Oligonucleotides; Plasmids; Protein Binding; Protein Conformation; Uridine Diphosphate | 2004 |
3-Deazaadenosine analogues of p5'A2'p5'A2'p5'A: synthesis, stereochemistry, and the roles of adenine ring nitrogen-3 in the interaction with RNase L.
Topics: Adenine; Animals; Chromatography, High Pressure Liquid; Circular Dichroism; Endoribonucleases; Enzyme Activation; Humans; Magnetic Resonance Spectroscopy; Mice; Molecular Structure; Nitrogen; Oligonucleotides; Phosphates; Stereoisomerism; Tubercidin | 2004 |
Simple method for determining nucleobase pK(a) values by indirect labeling and demonstration of a pK(a) of neutrality in dsDNA.
Topics: Adenine; Base Pairing; Cytosine; DNA; DNA, Complementary; Guanine; Hydrogen-Ion Concentration; Kinetics; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Conformation; Oligonucleotides; Thionucleotides; Thymine | 2004 |
DNA damage recognition and repair by the murine MutY homologue.
Topics: 8-Hydroxy-2'-Deoxyguanosine; Adenine; Animals; Base Pair Mismatch; Deoxyguanosine; DNA Damage; DNA Footprinting; DNA Glycosylases; DNA Repair; Electrophoretic Mobility Shift Assay; Escherichia coli; Kinetics; Mice; Oligonucleotides; Substrate Specificity | 2005 |
High-resolution structure of an extended A-tract: [d(CGCAAATTTGCG)]2.
Topics: Adenine; DNA; Hydrogen Bonding; Lithium; Magnesium; Nucleic Acid Conformation; Oligonucleotides; Thymine | 2004 |
Hybridization of oligonucleotide-modified silver and gold nanoparticles in aqueous dispersions and on gold films.
Topics: Adenine; DNA; Gold; Microscopy, Electron, Transmission; Nanostructures; Nucleic Acid Hybridization; Oligonucleotides; Silver; Spectroscopy, Fourier Transform Infrared; Sulfhydryl Compounds; Thymine | 2004 |
Influence of dT20 and [d(AT)10]2 on cisplatin hydrolysis studied by two-dimensional [1H,15N] HMQC NMR spectroscopy.
Topics: Adenine; Antineoplastic Agents; Cisplatin; Dinucleoside Phosphates; DNA; Hydrogen; Hydrogen-Ion Concentration; Hydrolysis; Magnetic Resonance Spectroscopy; Molecular Structure; Nitrogen Isotopes; Oligonucleotides; Poly T; Thermodynamics; Thymidine | 2005 |
Discrimination of single-nucleotide alterations by G-specific fluorescence quenching.
Topics: Adenine; Base Pair Mismatch; Biosensing Techniques; Fluorescence; Fluorescent Dyes; Guanine; Nucleotides; Oligonucleotides; Pyrenes; Spectrometry, Fluorescence; Thymidine | 2005 |
Transition from nonspecific to specific DNA interactions along the substrate-recognition pathway of dam methyltransferase.
Topics: Adenine; Adenosine; Amino Acid Sequence; Amino Acid Substitution; Bacteriophage T4; Base Sequence; Binding Sites; Catalysis; Catalytic Domain; Crystallography, X-Ray; DNA; Escherichia coli; Escherichia coli Proteins; Kinetics; Models, Molecular; Molecular Sequence Data; Nucleic Acid Conformation; Oligonucleotides; Protein Binding; Protein Conformation; S-Adenosylhomocysteine; Sequence Homology, Amino Acid; Site-Specific DNA-Methyltransferase (Adenine-Specific); Substrate Specificity; Viral Proteins | 2005 |
Role of an active site adenine in hairpin ribozyme catalysis.
Topics: Adenine; Base Pairing; Base Sequence; Binding Sites; Catalysis; Guanine; Hydrogen-Ion Concentration; Models, Molecular; Molecular Sequence Data; Mutation; Nucleic Acid Conformation; Oligonucleotides; RNA, Catalytic | 2005 |
Uranyl photoprobing of nonbent A/T- and bent A-tracts. A difference of flexibility?
Topics: 3' Untranslated Regions; 5' Untranslated Regions; Adenine; Base Pairing; DNA; Nucleic Acid Conformation; Oligonucleotides; Photoaffinity Labels; Sugar Phosphates; Thymine; Uranyl Nitrate | 2005 |
Location of the coenzyme binding site in the porcine mitochondrial NADP-dependent isocitrate dehydrogenase.
Topics: Adenine; Amino Acid Sequence; Animals; Arginine; Asparagine; Binding Sites; Circular Dichroism; Codon; Crystallography, X-Ray; Cytosol; DNA, Complementary; Electrophoresis, Polyacrylamide Gel; Hydrogen-Ion Concentration; Isocitrate Dehydrogenase; Isocitrates; Kinetics; Magnesium; Mitochondria; Models, Molecular; Molecular Sequence Data; Mutagenesis, Site-Directed; Mutation; NADP; Niacinamide; Oligonucleotides; Protein Binding; Swine; Threonine | 2005 |
Base stacking controls excited-state dynamics in A.T DNA.
Topics: Absorption; Adenine; Adenosine Monophosphate; AT Rich Sequence; Base Pairing; Base Sequence; Dimerization; DNA; Electrons; Oligonucleotides; Thymine; Time Factors | 2005 |
Synthesis and properties of aminopropyl nucleic acids.
Topics: Adenine; Amides; Amines; Base Pairing; Nucleic Acid Denaturation; Nucleosides; Oligonucleotides; Phosphoric Acids; Temperature; Thymine | 2005 |
Targeted cross-linking of the human beta-globin gene in living cells mediated by a triple helix forming oligonucleotide.
Topics: Adenine; Anemia, Sickle Cell; Base Sequence; Cross-Linking Reagents; Cytidine; Cytosine; DNA; Ficusin; Gene Targeting; Globins; Humans; Hydrogen-Ion Concentration; K562 Cells; Nucleic Acid Conformation; Oligonucleotides; Phosphates; Purines; Pyrimidines; Temperature; Tumor Cells, Cultured | 2006 |
Duocarmycins binding to DNA investigated by molecular simulation.
Topics: Adenine; Algorithms; Alkylation; Antineoplastic Agents, Alkylating; Base Sequence; Binding Sites; Catalysis; Computer Simulation; DNA; Duocarmycins; Hydrogen Bonding; Indoles; Molecular Conformation; Oligonucleotides; Pyrroles | 2006 |
Selectivity at a three-base bulge site in the DNA binding of DeltaDelta-[{Ru(phen)2} 2(mu-dppm)]4+ [dppm is 4,6-bis(2-pyridyl)pyrimidine; phen is 1,10-phenanthroline].
Topics: Adenine; Base Sequence; Binding Sites; DNA; Intercalating Agents; Ligands; Magnetic Resonance Spectroscopy; Models, Molecular; Molecular Sequence Data; Molecular Structure; Oligonucleotides; Organometallic Compounds; Phenanthrolines; Pyridines; Pyrimidines; Ruthenium; Spectrometry, Fluorescence; Stereoisomerism | 2006 |
Synthesis and hybridization properties of oligonucleotides containing (2S,3R)-9-(2,3,4-trihydroxybutyl)adenine.
Topics: Adenine; Base Pairing; Circular Dichroism; Hot Temperature; Nuclear Magnetic Resonance, Biomolecular; Nucleic Acid Denaturation; Nucleic Acid Hybridization; Oligonucleotides; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Stereoisomerism | 2006 |
Amplified oligonucleotide sensing in microliter volumes containing copper ions by solution streaming.
Topics: Adenine; Argon; Base Sequence; Copper; DNA Probes; Guanine; Ions; Microscopy, Atomic Force; Oligonucleotides; Solutions | 2006 |
Femtosecond time- and wavelength-resolved fluorescence and absorption spectroscopic study of the excited states of adenosine and an adenine oligomer.
Topics: Adenine; Adenosine; Oligonucleotides; Poly A; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet | 2006 |
Experimental investigations of the internal energy of molecules evaporated via laser-induced acoustic desorption into a Fourier transform ion cyclotron resonance mass spectrometer.
Topics: Acoustics; Adenine; Cyclotrons; Fourier Analysis; Lasers; Oligonucleotides; Spectrometry, Mass, Electrospray Ionization; Thermodynamics; Volatilization | 2007 |
Oligodeoxynucleotides incorporating structurally simple 5-alkynyl-2'-deoxyuridines fluorometrically respond to hybridization.
Topics: Adenine; Alkynes; Base Pairing; Deoxyuridine; DNA; Fluorescence; Fluorescent Dyes; Hot Temperature; Nucleic Acid Denaturation; Nucleic Acid Hybridization; Oligonucleotides | 2007 |
Effect of the preparation procedure on the structural properties of oligonucleotide/cationic liposome complexes (lipoplexes) studied by electron spin resonance and Zeta potential.
Topics: Adenine; Cations; Cryoelectron Microscopy; Electron Spin Resonance Spectroscopy; Fatty Acids, Monounsaturated; Liposomes; Magnetic Resonance Spectroscopy; Membrane Potentials; Molecular Structure; Oligonucleotides; Phosphatidylethanolamines; Quaternary Ammonium Compounds; Surface Properties; Thymine | 2007 |
An osmium-DNA interstrand complex: application to facile DNA methylation analysis.
Topics: 2,2'-Dipyridyl; Adenine; Base Sequence; Cross-Linking Reagents; Cytosine; DNA; DNA Methylation; Electrophoresis, Polyacrylamide Gel; Genome; Methylation; Nucleic Acid Hybridization; Oligonucleotides; Osmium; Oxidation-Reduction; Polymerase Chain Reaction; Pyrimidines; Sequence Analysis, DNA; Temperature | 2007 |
Conformational change induced by metal-ion-binding to DNA containing the artificial 1,2,4-triazole nucleoside.
Topics: Adenine; DNA; Models, Molecular; Molecular Structure; Nucleic Acid Conformation; Nucleosides; Oligonucleotides; Silver; Temperature; Thymine; Triazoles | 2007 |
Isostable DNA.
Topics: Adenine; Base Pairing; DNA; Drug Stability; Fluorescence; Oligonucleotide Array Sequence Analysis; Oligonucleotides; Thermodynamics; Thymidine | 2007 |
Unnatural substrates reveal the importance of 8-oxoguanine for in vivo mismatch repair by MutY.
Topics: 8-Hydroxy-2'-Deoxyguanosine; Adenine; Base Pairing; Base Sequence; Deoxyguanosine; DNA Damage; DNA Glycosylases; DNA Mismatch Repair; Escherichia coli; Guanine; Kinetics; Molecular Sequence Data; Oligonucleotides; Plasmids; Substrate Specificity | 2008 |
N2'-functionalized 2'-amino-alpha-L-LNA adenine derivatives--efficient targeting of single stranded DNA.
Topics: Adenine; DNA, Single-Stranded; Nucleic Acid Denaturation; Oligodeoxyribonucleotides; Oligonucleotides; Pyridines; RNA; Thymidine Monophosphate | 2007 |
Hoogsteen vs. Watson-Crick base pairing: incorporation of 2-substituted adenine- and 7-deazaadenine 2'-deoxy-beta-D-ribonucleosides into oligonucleotides.
Topics: Adenine; Aza Compounds; Base Pairing; Magnetic Resonance Spectroscopy; Molecular Structure; Nucleic Acid Denaturation; Oligonucleotides; Ribonucleosides; Thermodynamics | 2007 |
Dynamics in the DNA recognition by DAPI: exploration of the various binding modes.
Topics: Adenine; Base Pairing; Base Sequence; Binding Sites; Bisbenzimidazole; Buffers; Cytosine; DNA; Fluorescent Dyes; Guanine; Indoles; Intercalating Agents; Oligonucleotides; Solvents; Spectrometry, Fluorescence; Thymine; Time Factors | 2008 |
6-Azauracil or 8-aza-7-deazaadenine nucleosides and oligonucleotides: the effect of 2'-fluoro substituents and nucleobase nitrogens on conformation and base pairing.
Topics: Adenine; Base Pairing; Base Sequence; Crystallography, X-Ray; DNA; Hydrogen-Ion Concentration; Magnetic Resonance Spectroscopy; Nitrogen; Nucleic Acid Denaturation; Nucleosides; Oligonucleotides; Organophosphorus Compounds; RNA; Stereoisomerism; Transition Temperature; Uracil | 2008 |
Oligodeoxynucleotides containing 3-bromo-3-deazaadenine and 7-bromo-7-deazaadenine 2'-deoxynucleosides as chemical probes to investigate DNA-protein interactions.
Topics: Adenine; DNA; Molecular Probes; Oligonucleotides; Proteins | 2008 |
Sequence-specific control of azobenzene assemblies by molecular recognition of DNA.
Topics: Adenine; Air; Azo Compounds; DNA; Hydrogen Bonding; Hydrophobic and Hydrophilic Interactions; Molecular Structure; Oligonucleotides; Particle Size; Surface Properties; Water | 2008 |
DNA polymorphism as an origin of adenine-thymine tract length-dependent threading intercalation rate.
Topics: Adenine; Base Pairing; Crystallization; DNA; Intercalating Agents; Kinetics; Luminescent Measurements; Nucleic Acid Conformation; Oligonucleotides; Organometallic Compounds; Ruthenium; Temperature; Thymine | 2008 |
Back-electron transfer suppresses the periodic length dependence of DNA-mediated charge transport across adenine tracts.
Topics: 2-Aminopurine; Adenine; Anthraquinones; Base Sequence; DNA; Electrons; Models, Molecular; Oligonucleotides; Oxidation-Reduction; Quantum Theory; Rhodium | 2008 |
Characterization of the DNA adducts induced by aristolochic acids in oligonucleotides by electrospray ionization tandem mass spectrometry.
Topics: Adenine; Aristolochic Acids; DNA Adducts; Guanine; Oligonucleotides; Spectrometry, Mass, Electrospray Ionization; Tandem Mass Spectrometry | 2008 |
Nonenzymatic RNA ligation in water.
Topics: Adenine; Biochemistry; Dimerization; Hydrogen-Ion Concentration; Kinetics; Nucleic Acid Conformation; Oligonucleotides; Penicillium; Ribonucleases; RNA; Temperature; Thermodynamics; Time Factors; Water | 2008 |
Mass spectrometry studies of the binding of the minor groove-directed alkylating agent alkamin to AT-tract oligonucleotides.
Topics: Adenine; Alkylating Agents; Anilides; DNA Adducts; Nitrogen Mustard Compounds; Oligonucleotides; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Thymine | 2009 |
A bridged nucleic acid, 2',4'-BNA COC: synthesis of fully modified oligonucleotides bearing thymine, 5-methylcytosine, adenine and guanine 2',4'-BNA COC monomers and RNA-selective nucleic-acid recognition.
Topics: 5-Methylcytosine; Adenine; Base Pair Mismatch; Bridged-Ring Compounds; Circular Dichroism; DNA; Guanine; Nucleic Acid Conformation; Nucleic Acid Denaturation; Nucleic Acids; Oligonucleotides; RNA; Thymine | 2009 |
Efficient microRNA capture and bar-coding via enzymatic oligonucleotide adenylation.
Topics: Adenine; DNA Ligases; Electronic Data Processing; Humans; MicroRNAs; Oligonucleotides; RNA Ligase (ATP) | 2008 |
Recognition and processing of a new repertoire of DNA substrates by human 3-methyladenine DNA glycosylase (AAG).
Topics: Adenine; Base Sequence; Catalysis; Catalytic Domain; DNA; DNA Damage; DNA Glycosylases; DNA Repair; DNA, Single-Stranded; Electrophoretic Mobility Shift Assay; Guanine; Humans; Kinetics; Models, Molecular; Molecular Structure; Oligonucleotides; Protein Binding; Protein Structure, Tertiary; Sequence Deletion; Substrate Specificity | 2009 |
The role of adenine excimers in the photophysics of oligonucleotides.
Topics: Adenine; Dimerization; DNA; Hydrogen; Models, Molecular; Molecular Conformation; Nucleic Acid Conformation; Oligonucleotides; Photochemistry; Spectrophotometry, Ultraviolet; Ultraviolet Rays | 2009 |
Facilitated assignment of adenine H2 resonances in oligonucleotides using homonuclear long-range couplings.
Topics: Adenine; Base Sequence; Magnetic Resonance Spectroscopy; Methods; Oligonucleotides; Protons | 2009 |
Improved phosphoramidite building blocks for the synthesis of the simplified nucleic acid GNA.
Topics: Adenine; Formamides; Glycols; Guanine; Nucleic Acids; Oligonucleotides; Organophosphorus Compounds | 2009 |
A CA(+) pair adjacent to a sheared GA or AA pair stabilizes size-symmetric RNA internal loops.
Topics: Adenine; Base Pairing; Base Sequence; Cytosine; Guanine; Hydrogen-Ion Concentration; Magnetic Resonance Spectroscopy; Molecular Sequence Data; Nucleic Acid Conformation; Oligonucleotides; RNA; RNA Stability; Thermodynamics | 2009 |
Self-assembling sequence-adaptive peptide nucleic acids.
Topics: Adenine; Amino Acids; Base Pairing; Base Sequence; Biotinylation; Dipeptides; DNA; Models, Molecular; Molecular Structure; Nucleic Acid Conformation; Oligonucleotides; Peptide Nucleic Acids; Peptides; RNA | 2009 |
Base pairing configuration and stability of an oligonucleotide duplex containing a 5-chlorouracil-adenine base pair.
Topics: Adenine; Base Pair Mismatch; Base Pairing; Deoxyuridine; Nucleic Acid Conformation; Nucleic Acid Heteroduplexes; Oligonucleotides; RNA Stability; Thermodynamics; Uracil | 2009 |
Electronic and molecular structure of M-DNA fragments.
Topics: Adenine; Base Pairing; Cytosine; DNA; Electrons; Guanine; Hydrogen Bonding; Models, Molecular; Nanotechnology; Nickel; Nucleic Acid Conformation; Oligonucleotides; Protons; Quantum Theory; Thermodynamics; Thymine; Zinc | 2011 |
Azide-alkyne "click" conjugation of 8-aza-7-deazaadenine-DNA: synthesis, duplex stability, and fluorogenic dye labeling.
Topics: Adenine; Alkynes; Azides; Base Pairing; DNA; DNA, Single-Stranded; Fluorescent Dyes; Molecular Dynamics Simulation; Nucleic Acid Denaturation; Oligonucleotides; Organophosphorus Compounds; Spectrometry, Fluorescence; Staining and Labeling; Temperature | 2010 |
2'-O,4'-C-methyleneoxymethylene bridged nucleic acids (2',4'-BNA(COC)).
Topics: 5-Methylcytosine; Adenine; Biological Products; Bridged-Ring Compounds; Chemistry, Pharmaceutical; Cytosine; DNA; Guanine; Nucleosides; Oligonucleotides; Oligonucleotides, Antisense; Organophosphorus Compounds; RNA; Thymine | 2011 |
Hybridization in ssDNA films--a multi-technique spectroscopy study.
Topics: Adenine; DNA, Single-Stranded; Gold; Nucleic Acid Hybridization; Oligonucleotides; Photoelectron Spectroscopy; Sulfhydryl Compounds; Thymine | 2011 |
5-amino-2-mercapto-1,3,4-thidiazole modified single-use sensors for electrochemical DNA analysis.
Topics: Adenine; Biosensing Techniques; Dielectric Spectroscopy; DNA; Electrodes; Graphite; Microscopy, Electron, Scanning; Oligonucleotides; Oxidation-Reduction; Solutions; Sulfhydryl Compounds; Thiadiazoles | 2012 |
Hybridization potential of oligonucleotides comprising 3'-O-methylated altritol nucleosides.
Topics: Adenine; Cytosine; Guanine; Magnetic Resonance Spectroscopy; Nucleic Acid Hybridization; Nucleosides; Oligonucleotides; RNA, Small Interfering; Sequence Analysis, RNA; Solid-Phase Synthesis Techniques; Sugar Alcohols; Thermodynamics; Ultraviolet Rays; Uracil | 2012 |
Is rituximab maintenance still standard of care in indolent non-hodgkin lymphoma?
Topics: Adenine; Antibodies, Monoclonal; Antibodies, Monoclonal, Humanized; Antibodies, Monoclonal, Murine-Derived; Antigens, CD20; Antineoplastic Agents; Chronic Disease; Disease Management; Drug Administration Schedule; Humans; Lymphoma, Non-Hodgkin; Oligonucleotides; Piperidines; Protein Kinase Inhibitors; Pyrazoles; Pyrimidines; Randomized Controlled Trials as Topic; Rituximab; Standard of Care | 2012 |
Triazolyl donor/acceptor chromophore decorated unnatural nucleosides and oligonucleotides with duplex stability comparable to that of a natural adenine/thymine pair.
Topics: Adenine; Base Pairing; Click Chemistry; DNA; Fluorescence; Magnetic Resonance Spectroscopy; Nucleosides; Oligonucleotides; Thymine; Triazoles | 2013 |
Highly mutagenic exocyclic DNA adducts are substrates for the human nucleotide incision repair pathway.
Topics: Adenine; Biocatalysis; Cell Extracts; Cell-Free System; Cytosine; DNA Adducts; DNA Glycosylases; DNA Repair; DNA-(Apurinic or Apyrimidinic Site) Lyase; HeLa Cells; Humans; Kinetics; Mutagens; Oligonucleotides; Oxidation-Reduction; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Substrate Specificity; Thymine; Time Factors | 2012 |
Base pairing and miscoding properties of 1,N(6)-ethenoadenine- and 3,N(4)-ethenocytosine-containing RNA oligonucleotides.
Topics: Adenine; Base Pairing; Base Sequence; Circular Dichroism; Cytosine; Nucleic Acid Denaturation; Oligonucleotides; Organophosphorus Compounds; RNA | 2013 |
Stacking interactions between adenines in oxidized oligonucleotides.
Topics: Adenine; Base Sequence; DNA, B-Form; Electrochemical Techniques; Molecular Dynamics Simulation; Nucleic Acid Conformation; Oligonucleotides; Oxidation-Reduction; Quantum Theory | 2013 |
Sensitive and reusable electrochemiluminescent aptasensor achieved with diblock oligonucleotides immobilized solely through preferential adenine-Au interaction.
Topics: Adenine; Animals; Aptamers, Nucleotide; Biosensing Techniques; Electrochemical Techniques; Gold; Male; Metal Nanoparticles; Oligonucleotides; Rats; Rats, Sprague-Dawley | 2013 |
Ligand-induced stabilization of the aptamer terminal helix in the add adenine riboswitch.
Topics: Adenine; Aptamers, Nucleotide; Binding Sites; Gene Expression Regulation; Hydrogen Bonding; Molecular Dynamics Simulation; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Riboswitch; RNA, Messenger; Thermodynamics | 2013 |
Adenine-DNA adduct derived from the nitroreduction of 6-nitrochrysene is more resistant to nucleotide excision repair than guanine-DNA adducts.
Topics: Adenine; Animals; Benzo(a)pyrene; Cattle; Chrysenes; DNA; DNA Adducts; DNA Repair; Guanine; HeLa Cells; Humans; Mice; Oligonucleotides; Oxidation-Reduction; Rats; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization | 2013 |
Chemical map of Schizosaccharomyces pombe reveals species-specific features in nucleosome positioning.
Topics: Adenine; Base Sequence; Chromosomes, Fungal; Molecular Conformation; Molecular Sequence Data; Nucleosomes; Oligonucleotides; Saccharomyces cerevisiae; Schizosaccharomyces; Sequence Alignment; Sequence Analysis, DNA; Species Specificity; Thymine | 2013 |
Synthesis and characterization of oligodeoxyribonucleotides modified with 2'-amino-α-L-LNA adenine monomers: high-affinity targeting of single-stranded DNA.
Topics: Adenine; DNA, Single-Stranded; Molecular Structure; Oligodeoxyribonucleotides; Oligonucleotides | 2013 |
Establishment of real time allele specific locked nucleic acid quantitative PCR for detection of HBV YIDD (ATT) mutation and evaluation of its application.
Topics: Adenine; Adult; Alleles; Antiviral Agents; DNA Primers; DNA, Viral; Drug Resistance, Viral; Early Diagnosis; Female; Hepatitis B virus; Hepatitis B, Chronic; Humans; Isoleucine; Lamivudine; Limit of Detection; Male; Middle Aged; Molecular Sequence Data; Mutation; Nucleotide Motifs; Oligonucleotides; Organophosphonates; Real-Time Polymerase Chain Reaction | 2014 |
Aberrant repair initiated by mismatch-specific thymine-DNA glycosylases provides a mechanism for the mutational bias observed in CpG islands.
Topics: Adenine; Animals; Base Pair Mismatch; Cells, Cultured; CpG Islands; DNA; DNA Damage; DNA Repair; Humans; Mice; Mutation; Oligonucleotides; Polymorphism, Single Nucleotide; Thymine; Thymine DNA Glycosylase | 2014 |
An evaluation of selective deprotection conditions for the synthesis of RNA on a light labile solid support.
Topics: Adenine; Chromatography, Thin Layer; Cytosine; Guanine; Nucleosides; Oligonucleotides; RNA; Uracil | 2014 |
Thymine/adenine diblock-oligonucleotide monolayers and hybrid brushes on gold: a spectroscopic study.
Topics: Adenine; Gold; Oligonucleotides; Photoelectron Spectroscopy; Spectroscopy, Fourier Transform Infrared; Thymine; X-Ray Absorption Spectroscopy | 2013 |
Role of excitonic coupling and charge-transfer states in the absorption and CD spectra of adenine-based oligonucleotides investigated through QM/MM simulations.
Topics: Absorption, Physicochemical; Adenine; Base Pairing; Circular Dichroism; Electron Transport; Molecular Dynamics Simulation; Oligonucleotides; Quantum Theory; Water | 2014 |
Metal-ion-mediated base pairing between natural nucleobases and bidentate 3,5-dimethylpyrazolyl-substituted purine ligands.
Topics: Adenine; Base Pairing; Copper; Hypoxanthines; Ions; Ligands; Metals; Oligonucleotides; Photoelectron Spectroscopy; Purines | 2014 |
Hole delocalization over adenine tracts in single stranded DNA oligonucleotides.
Topics: Adenine; DNA, Single-Stranded; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Thermodynamics | 2015 |
Monitoring translocation of multisubunit RNA polymerase along the DNA with fluorescent base analogues.
Topics: 2-Aminopurine; Adenine; DNA; DNA-Directed RNA Polymerases; Escherichia coli; Fluorescence; Guanine; Molecular Biology; Molecular Structure; Oligonucleotides; Spectrometry, Fluorescence; Transcription, Genetic; Xanthopterin | 2015 |
Hybridisation potential of 1',3'-Di-O-methylaltropyranoside nucleic acids.
Topics: Adenine; Cytosine; DNA; Guanine; Nucleic Acid Denaturation; Nucleic Acid Hybridization; Nucleic Acids; Oligonucleotides; RNA, Small Interfering; Sugar Alcohols; Thermodynamics; Uracil | 2015 |
N-Branched acyclic nucleoside phosphonates as monomers for the synthesis of modified oligonucleotides.
Topics: Adenine; Base Sequence; DNA-Directed DNA Polymerase; Humans; Nucleic Acid Synthesis Inhibitors; Nucleosides; Oligonucleotides; Organophosphonates; Thymine | 2015 |
1',5'-Anhydro-L-ribo-hexitol Adenine Nucleic Acids (α-L-HNA-A): Synthesis and Chiral Selection Properties in the Mirror Image World.
Topics: Adenine; Base Pairing; Models, Molecular; Nucleic Acid Conformation; Nucleic Acids; Oligonucleotides; RNA; Stereoisomerism; Sugar Alcohols | 2015 |
Anti-parallel triplexes: Synthesis of 8-aza-7-deazaadenine nucleosides with a 3-aminopropynyl side-chain and its corresponding LNA analog.
Topics: Adenine; Base Pairing; Base Sequence; Drug Stability; Hydrogen Bonding; Hydrogen-Ion Concentration; Molecular Conformation; Molecular Sequence Data; Oligonucleotides; Organophosphorus Compounds; Propylamines | 2015 |
Polymerase incorporation of a 2'-deoxynucleoside-5'-triphosphate bearing a 4-hydroxy-2-mercaptobenzimidazole nucleobase analogue.
Topics: Adenine; Base Pairing; Base Sequence; Benzimidazoles; DNA Primers; DNA-Directed DNA Polymerase; Nucleotides; Oligonucleotides; Polymerization; Polyphosphates | 2015 |
Photophysical deactivation pathways in adenine oligonucleotides.
Topics: Adenine; Dimerization; Energy Transfer; Molecular Dynamics Simulation; Oligonucleotides; Quantum Theory; Sodium Chloride; Ultraviolet Rays | 2015 |
High-Energy Long-Lived Mixed Frenkel-Charge-Transfer Excitons: From Double Stranded (AT)n to Natural DNA.
Topics: Adenine; Animals; Cattle; Cytosine; DNA; Energy Transfer; Oligonucleotides; Quantum Theory; Spectrometry, Fluorescence; Thymine; Ultraviolet Rays | 2016 |
Conversion of adenine to 5-amino-4-pyrimidinylimidazole caused by acetyl capping during solid phase oligonucleotide synthesis.
Topics: Adenine; Imidazoles; Models, Molecular; Molecular Structure; Oligonucleotides | 2016 |
Silver Ions in Non-canonical DNA Base Pairs: Metal-Mediated Mismatch Stabilization of 2'-Deoxyadenosine and 7-Deazapurine Derivatives with 2'-Deoxycytidine and 2'-Deoxyguanosine.
Topics: Adenine; Anions; Base Pair Mismatch; Base Pairing; Binding Sites; Deoxyadenosines; Deoxycytidine; Deoxyguanosine; DNA; Guanine; Nucleic Acid Conformation; Nucleosides; Oligonucleotides; Purines; Silver; Solid-Phase Synthesis Techniques | 2016 |
Sequence-dependent separation of trinucleotides by ion-interaction reversed-phase liquid chromatography-A structure-retention study assisted by soft-modelling and molecular dynamics.
Topics: Adenine; Chromatography, High Pressure Liquid; Chromatography, Reverse-Phase; Guanine; Molecular Dynamics Simulation; Neural Networks, Computer; Oligonucleotides; Quantitative Structure-Activity Relationship; Solvents; Static Electricity; Thymine; Water | 2016 |
A Dinuclear Mercury(II)-Mediated Base Pair in DNA.
Topics: Adenine; Base Pairing; Cations, Divalent; DNA; Mercury; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Protons; Temperature; Thymine | 2016 |
Silver-Mediated Base Pairs in DNA Incorporating Purines, 7-Deazapurines, and 8-Aza-7-deazapurines: Impact of Reduced Nucleobase Binding Sites and an Altered Glycosylation Position.
Topics: Adenine; Base Pairing; Binding Sites; Circular Dichroism; DNA; Glycosylation; Nucleosides; Oligonucleotides; Purines; Silver | 2017 |
Biochemical Characterization of AP Lyase and m
Topics: Adenine; AlkB Homolog 1, Histone H2a Dioxygenase; Catalytic Domain; DNA; DNA Adducts; Enzyme Assays; Escherichia coli; Escherichia coli Proteins; Gene Expression; Humans; Mixed Function Oxygenases; Models, Molecular; Oligonucleotides; Oxidoreductases, O-Demethylating; Protein Structure, Secondary; Recombinant Fusion Proteins; Sequence Homology, Amino Acid; Species Specificity | 2017 |
Clustered abasic lesions profoundly change the structure and stability of human telomeric G-quadruplexes.
Topics: Adenine; Circular Dichroism; DNA; Furans; G-Quadruplexes; Humans; Models, Molecular; Nuclear Magnetic Resonance, Biomolecular; Oligonucleotides; Solutions; Telomere; Telomere Shortening | 2017 |
Influence of amine and thiol modifications at the 3' ends of single stranded DNA molecules on their adsorption on gold surface and the efficiency of their hybridization.
Topics: Adenine; Adsorption; Amines; DNA, Single-Stranded; Gold; Microscopy, Atomic Force; Nucleic Acid Hybridization; Oligonucleotides; Spectrophotometry, Infrared; Sulfhydryl Compounds; Thymine | 2018 |
Atomic Structure of a Fluorescent Ag
Topics: Adenine; Base Pairing; Crystallization; Crystallography, X-Ray; Cytosine; Fluorescent Dyes; Molecular Structure; Nitrogen; Oligonucleotides; Silver | 2019 |
Effective syntheses of 2',4'-BNA
Topics: 5-Methylcytosine; Adenine; Bridged-Ring Compounds; Glycosylation; Guanine; Nucleotides; Oligonucleotides; Thymine; Transition Temperature; Ultraviolet Rays | 2019 |
[Hachimoji DNA extends coding possibilities].
Topics: Adenine; Cytosine; DNA; Guanine; Hydrogen Bonding; Molecular Structure; Nucleotides; Oligonucleotides; Synthetic Biology; Thymine | 2019 |
Synthesis of selenomethylene-locked nucleic acids (SeLNA) nucleoside unit bearing an adenine base.
Topics: Adenine; Molecular Structure; Oligonucleotides; Selenium Compounds; Selenium Radioisotopes | 2020 |
Silver(I)-mediated base pairing in DNA involving the artificial nucleobase 7,8-dihydro-8-oxo-1,N
Topics: Adenine; Base Pairing; Calorimetry; Circular Dichroism; Cytosine; DNA; Hydrogen Bonding; Ions; Molecular Structure; Nucleic Acids; Oligonucleotides; Oxygen; Silver; Spectrometry, Fluorescence; Transition Temperature | 2021 |
Synthesis of Oligonucleotides Containing Trans Mitomycin C DNA Adducts at N
Topics: Adenine; DNA Adducts; Guanine; Mitomycin; Oligonucleotides | 2021 |
Adenine oligomer directed synthesis of chiral gold nanoparticles.
Topics: Adenine; Gold; Metal Nanoparticles; Oligonucleotides | 2022 |
A Chemical Approach to Introduce 2,6-Diaminopurine and 2-Aminoadenine Conjugates into Oligonucleotides without Need for Protecting Groups.
Topics: 2-Aminopurine; Adenine; Oligonucleotides | 2022 |
Coumarin 6H-fused fluorescent probe for highly sensitive detection of coralyne using oligonucleotide-modified silver nanoparticles.
Topics: Adenine; Berberine Alkaloids; Coumarins; Fluorescent Dyes; Humans; Limit of Detection; Metal Nanoparticles; Oligonucleotides; Silver; Thymidine | 2022 |
Exploring the Binding Process of Cognate Ligand to Add Adenine Riboswitch Aptamer by Using Explicit Solvent Molecular Dynamics (MD) Simulation.
Topics: Adenine; Aptamers, Nucleotide; Ligands; Molecular Dynamics Simulation; Nucleic Acid Conformation; Oligonucleotides; Riboswitch; Solvents | 2023 |
SCX-tip-aided LC-MS detection of active ricin
Topics: Adenine; Chromatography, Liquid; Kinetics; Molecular Docking Simulation; Oligonucleotides; Ricin; RNA; Tandem Mass Spectrometry | 2023 |
Multiphoton characterization and live cell imaging using fluorescent adenine analogue 2CNqA.
Topics: Adenine; Fluorescent Dyes; Oligonucleotides; Purine Nucleosides; Spectrometry, Fluorescence | 2023 |