Page last updated: 2024-08-24

5-methylcytosine and uracil

5-methylcytosine has been researched along with uracil in 30 studies

Research

Studies (30)

TimeframeStudies, this research(%)All Research%
pre-19905 (16.67)18.7374
1990's9 (30.00)18.2507
2000's3 (10.00)29.6817
2010's9 (30.00)24.3611
2020's4 (13.33)2.80

Authors

AuthorsStudies
Hayatsu, H; Shiragami, M1
Ebright, RH; Ebright, YW; Gunasekera, A1
Ehrlich, M; Gehrke, CW; Kuo, KC; Norris, KF; Wang, RY1
Deutsch, WA; Green, DA1
Warren, RA1
Bandaru, B; Bhagwat, AS; Wyszynski, M1
Klimasauskas, S; Roberts, RJ1
Clark, SJ; Frommer, M; Harrison, J; Paul, CL1
Brooks, PJ; Goldman, D; Marietta, C1
Burnett, AK; Ramsahoye, BH; Taylor, C1
Gonzalgo, ML; Jones, PA1
Allain, P; Boisdron-Celle, M; Gamelin, E; Larra, F; Robert, J; Turcant, A1
Boudou, V; Busson, R; De Bouvere, B; Herdewijn, P; Kerremans, L; Lescrinier, E; Schepers, G; Van Aerschot, A1
Clark, SJ; Grunau, C; Rosenthal, A1
DEYSSON, G; TRUHAUT, R1
Chen, Z; Cokus, SJ; Feng, S; Haudenschild, CD; Jacobsen, SE; Merriman, B; Nelson, SF; Pellegrini, M; Pradhan, S; Zhang, X1
Abdel Nour, AM; Chango, A; Niquet, C; Tessier, FJ1
Aichinger, E; Köhler, C1
Balasubramanian, S; Booth, MJ; Branco, MR; Ficz, G; Krueger, F; Oxley, D; Reik, W1
Drohat, AC; MacKerell, AD; Maiti, A; Noon, MS; Pozharski, E1
Bohn, MF; Brown, WL; Carpenter, MA; Harris, RS; Lackey, L; Land, AM; Law, EK; Leonard, B; Li, M; Rathore, A; Schiffer, CA; Shandilya, SM1
Fu, B; Guo, G; Huang, R; Mao, W; Wang, J; Xing, X; Zhou, X1
Brown, T; Fox, KR; Kimber, ST1
Grin, I; Ishchenko, AA1
Moran, S1
Wang, M; Wang, ZY; Zhang, CY; Zhang, Y1
Cortez, D; Heintzman, DR; Lovejoy, CA; Mehta, KPM; Zhao, R1
Chakrapani, A; Hocek, M; Krásný, L; Pohl, R; Ruiz-Larrabeiti, O; Vaňková Hausnerová, V1
Daumann, LJ; Janßen, R; Jonasson, NSW; Menke, A; Zipse, H; Zott, FL1
Cao, W; Chang, C; Fang, GC; Li, J; Liang, C; Park, SH; Yang, Y1

Reviews

3 review(s) available for 5-methylcytosine and uracil

ArticleYear
Modified bases in bacteriophage DNAs.
    Annual review of microbiology, 1980, Volume: 34

    Topics: 2-Aminopurine; 5-Methylcytosine; Adenine; Bacteriophages; Base Composition; Chemical Phenomena; Chemistry; Chemistry, Physical; Cytosine; Deoxyribonucleases; DNA Replication; DNA, Viral; Nucleic Acid Conformation; Pentoxyl; Substrate Specificity; Templates, Genetic; Thymine; Transcription, Genetic; Uracil

1980
Mutagenic and epigenetic effects of DNA methylation.
    Mutation research, 1997, Volume: 386, Issue:2

    Topics: 5-Methylcytosine; Animals; Cytosine; DNA Methylation; Enzymes; Gene Expression Regulation, Neoplastic; Genes, Tumor Suppressor; Humans; Mutation; Neoplasms; Transcription, Genetic; Uracil

1997
Technologies for Deciphering Epigenomic DNA Patterns.
    Advances in experimental medicine and biology, 2017, Volume: 978

    Topics: 5-Methylcytosine; CpG Islands; Cytosine; DNA Methylation; Epigenomics; Formaldehyde; Humans; Microarray Analysis; Paraffin Embedding; Sulfites; Tissue Fixation; Uracil

2017

Other Studies

27 other study(ies) available for 5-methylcytosine and uracil

ArticleYear
Reaction of bisulfite with the 5-hydroxymethyl group in pyrimidines and in phage DNAs.
    Biochemistry, 1979, Feb-20, Volume: 18, Issue:4

    Topics: 5-Methylcytosine; Chemical Phenomena; Chemistry; Coliphages; Cytosine; DNA, Viral; Pentoxyl; Pyrimidines; Spectrophotometry, Ultraviolet; Sulfites; Uracil

1979
DNA sequence determinants for binding of the Escherichia coli catabolite gene activator protein.
    The Journal of biological chemistry, 1992, Jul-25, Volume: 267, Issue:21

    Topics: 5-Methylcytosine; Base Sequence; Cyclic AMP Receptor Protein; Cytosine; DNA, Bacterial; Escherichia coli; Methylation; Molecular Sequence Data; Mutation; Substrate Specificity; Thermodynamics; Thymine; Uracil

1992
DNA cytosine methylation and heat-induced deamination.
    Bioscience reports, 1986, Volume: 6, Issue:4

    Topics: 5-Methylcytosine; Cytosine; Deamination; DNA, Bacterial; DNA, Single-Stranded; Escherichia coli; Hot Temperature; Humans; Kinetics; Methylation; Thymine; Uracil

1986
Direct determination of uracil in [32P,uracil-3H]poly(dA.dT) and bisulfite-treated phage PM2 DNA.
    Analytical biochemistry, 1984, Nov-01, Volume: 142, Issue:2

    Topics: 5-Methylcytosine; Bacteriophages; Chromatography, Thin Layer; Cytosine; Deoxyuracil Nucleotides; DNA; DNA Glycosylases; DNA, Viral; Humans; N-Glycosyl Hydrolases; Placenta; Poly dA-dT; Polydeoxyribonucleotides; Polyethyleneimine; Sulfites; Uracil; Uracil-DNA Glycosidase

1984
HpaII methyltransferase is mutagenic in Escherichia coli.
    Journal of bacteriology, 1995, Volume: 177, Issue:10

    Topics: 5-Methylcytosine; Base Sequence; Cytosine; DNA Repair; DNA-Cytosine Methylases; Escherichia coli; Haemophilus; Molecular Sequence Data; Mutagenesis; Thymine; Uracil

1995
M.HhaI binds tightly to substrates containing mismatches at the target base.
    Nucleic acids research, 1995, Apr-25, Volume: 23, Issue:8

    Topics: 5-Methylcytosine; Base Sequence; Cytosine; Dinucleoside Phosphates; DNA; DNA-Cytosine Methylases; Kinetics; Methylation; Molecular Sequence Data; Nucleic Acid Heteroduplexes; S-Adenosylhomocysteine; S-Adenosylmethionine; Substrate Specificity; Uracil

1995
High sensitivity mapping of methylated cytosines.
    Nucleic acids research, 1994, Aug-11, Volume: 22, Issue:15

    Topics: 5-Methylcytosine; Base Sequence; Cloning, Molecular; Cytosine; DNA Primers; DNA, Single-Stranded; Hydrogen-Ion Concentration; Kinetics; Methylation; Molecular Sequence Data; Nucleic Acid Denaturation; Polymerase Chain Reaction; Sequence Analysis, DNA; Sulfites; Uracil

1994
DNA mismatch repair and DNA methylation in adult brain neurons.
    The Journal of neuroscience : the official journal of the Society for Neuroscience, 1996, Feb-01, Volume: 16, Issue:3

    Topics: 5-Methylcytosine; Animals; Base Composition; Base Sequence; Brain; Cytosine; DNA; DNA (Cytosine-5-)-Methyltransferases; DNA Damage; DNA Repair; Liver; Methylation; Molecular Sequence Data; Nerve Tissue Proteins; Neurons; Organ Specificity; Rats; Thymine; Thymus Gland; Uracil

1996
Nucleic acid composition of bone marrow mononuclear cells in cobalamin deficiency.
    Blood, 1996, Mar-01, Volume: 87, Issue:5

    Topics: 5-Methylcytosine; Aged; Aged, 80 and over; Anemia, Megaloblastic; Artifacts; Bone Marrow; Chromatography, High Pressure Liquid; Cytosine; Deamination; DNA; DNA Glycosylases; Female; Humans; Male; Methionine; Methylation; Middle Aged; N-Glycosyl Hydrolases; Reproducibility of Results; Uracil; Uracil-DNA Glycosidase; Vitamin B 12 Deficiency

1996
Rapid and sensitive high-performance liquid chromatographic analysis of halogenopyrimidines in plasma.
    Journal of chromatography. B, Biomedical sciences and applications, 1997, Aug-01, Volume: 695, Issue:2

    Topics: 5-Methylcytosine; Antimetabolites, Antineoplastic; Bromouracil; Chromatography, High Pressure Liquid; Cytosine; Flucytosine; Fluorouracil; Humans; Hydrogen-Ion Concentration; Osmolar Concentration; Reproducibility of Results; Sensitivity and Specificity; Spectrophotometry, Ultraviolet; Uracil

1997
Base pairing of anhydrohexitol nucleosides with 2,6-diaminopurine, 5-methylcytosine and uracil asbase moiety.
    Nucleic acids research, 1999, Mar-15, Volume: 27, Issue:6

    Topics: 2-Aminopurine; 5-Methylcytosine; Arabinonucleosides; Base Pairing; Cytosine; Models, Molecular; Nucleic Acid Denaturation; Nucleosides; Oligonucleotides; Purine Nucleosides; Pyrimidine Nucleosides; Sugar Alcohols; Uracil

1999
Bisulfite genomic sequencing: systematic investigation of critical experimental parameters.
    Nucleic acids research, 2001, Jul-01, Volume: 29, Issue:13

    Topics: 5-Methylcytosine; Amination; Bacteriophage M13; Base Sequence; Chromatography, High Pressure Liquid; Cloning, Molecular; Cytosine; DNA; DNA Methylation; DNA Primers; DNA, Single-Stranded; DNA, Viral; Genome; Molecular Sequence Data; Nucleic Acid Denaturation; Plasmids; Polymerase Chain Reaction; Sensitivity and Specificity; Sequence Analysis, DNA; Sulfites; Temperature; Templates, Genetic; Uracil

2001
[Research on the antimitotic properties of antagonists of natural pyrimidine bases. II. 6-Azauracil, 6-azathymine, 2-thio-5-methylcytosine and 4-methyl-5-bis(beta-chloroethyl)-aminouracil].
    Bulletin de la Societe de chimie biologique, 1962, Volume: 44

    Topics: 5-Methylcytosine; Antimitotic Agents; Antineoplastic Agents; Pyrimidines; Thymine; Uracil

1962
Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning.
    Nature, 2008, Mar-13, Volume: 452, Issue:7184

    Topics: 5-Methylcytosine; Animals; Arabidopsis; Base Sequence; Computational Biology; Cytosine; DNA Methylation; Gene Expression Regulation, Plant; Gene Library; Genome, Plant; Mice; Mutation; Promoter Regions, Genetic; Reproducibility of Results; Sequence Analysis, DNA; Sulfites; Uracil

2008
Simultaneous determination of genomic DNA methylation and uracil misincorporation.
    Medical principles and practice : international journal of the Kuwait University, Health Science Centre, 2009, Volume: 18, Issue:2

    Topics: 5-Methylcytosine; Cell Line; Chromatography, High Pressure Liquid; Deoxyuracil Nucleotides; DNA; Dose-Response Relationship, Drug; Methylation; Nucleic Acid Hybridization; Spectrometry, Mass, Electrospray Ionization; Uracil

2009
Bisulphite sequencing of plant genomic DNA.
    Methods in molecular biology (Clifton, N.J.), 2010, Volume: 655

    Topics: 5-Methylcytosine; Base Sequence; Cytosine; DNA Methylation; DNA, Plant; DNA, Single-Stranded; Epigenomics; Genome, Plant; Plants; Polymerase Chain Reaction; Sequence Analysis, DNA; Sulfites; Uracil

2010
Quantitative sequencing of 5-methylcytosine and 5-hydroxymethylcytosine at single-base resolution.
    Science (New York, N.Y.), 2012, May-18, Volume: 336, Issue:6083

    Topics: 5-Methylcytosine; Animals; CpG Islands; Cytosine; DNA; DNA Methylation; Embryonic Stem Cells; Epigenesis, Genetic; Genes, Intracisternal A-Particle; High-Throughput Nucleotide Sequencing; Long Interspersed Nucleotide Elements; Mice; Oxidation-Reduction; Rhenium; Sequence Analysis, DNA; Sulfites; Transcription, Genetic; Uracil

2012
Lesion processing by a repair enzyme is severely curtailed by residues needed to prevent aberrant activity on undamaged DNA.
    Proceedings of the National Academy of Sciences of the United States of America, 2012, May-22, Volume: 109, Issue:21

    Topics: 5-Methylcytosine; Catalytic Domain; CpG Islands; Crystallography; DNA Repair; Enzyme Activation; Escherichia coli; Escherichia coli Proteins; Humans; Mutagenesis; N-Glycosyl Hydrolases; Protein Structure, Tertiary; Substrate Specificity; Thymine; Thymine DNA Glycosylase; Uracil; Uracil-DNA Glycosidase; Water

2012
Methylcytosine and normal cytosine deamination by the foreign DNA restriction enzyme APOBEC3A.
    The Journal of biological chemistry, 2012, Oct-05, Volume: 287, Issue:41

    Topics: 5-Methylcytosine; Cytidine Deaminase; Deamination; DNA; Enzyme Induction; HEK293 Cells; Humans; Immunity, Innate; Interferons; Plasmids; Proteins; Thymine; Uracil

2012
A novel combined bisulfite UDG assay for selective 5-methylcytosine detection.
    Talanta, 2013, Dec-15, Volume: 117

    Topics: 5-Methylcytosine; Cytosine; DNA; DNA Cleavage; DNA Methylation; Electrophoresis, Polyacrylamide Gel; Enzyme Assays; Humans; Oligodeoxyribonucleotides; Sensitivity and Specificity; Sequence Analysis, DNA; Sodium Hydroxide; Solutions; Sulfites; Uracil; Uracil-DNA Glycosidase

2013
A mutant of uracil DNA glycosylase that distinguishes between cytosine and 5-methylcytosine.
    PloS one, 2014, Volume: 9, Issue:4

    Topics: 5-Methylcytosine; Bacterial Proteins; Base Sequence; Cytosine; DNA; Escherichia coli; Gene Expression; Molecular Sequence Data; Mutation; Oligonucleotides; Recombinant Proteins; Substrate Specificity; Thymine; Uracil; Uracil-DNA Glycosidase

2014
An interplay of the base excision repair and mismatch repair pathways in active DNA demethylation.
    Nucleic acids research, 2016, 05-05, Volume: 44, Issue:8

    Topics: 5-Methylcytosine; Animals; Cell Line; Cell Line, Tumor; DNA; DNA Mismatch Repair; DNA Repair; Gene Expression; Humans; Mice; Mice, Knockout; MutS Homolog 2 Protein; Pentoxyl; Promoter Regions, Genetic; Uracil

2016
Sensitive and label-free discrimination of 5-hydroxymethylcytosine and 5-methylcytosine in DNA by ligation-mediated rolling circle amplification.
    Chemical communications (Cambridge, England), 2018, Aug-11, Volume: 54, Issue:62

    Topics: 5-Methylcytosine; DNA; Fluorescence; Humans; Molecular Structure; Nucleic Acid Amplification Techniques; Oxidation-Reduction; Uracil

2018
HMCES Maintains Replication Fork Progression and Prevents Double-Strand Breaks in Response to APOBEC Deamination and Abasic Site Formation.
    Cell reports, 2020, 06-02, Volume: 31, Issue:9

    Topics: 5-Methylcytosine; Cell Line; Cell Nucleus; Chromatin; Cytidine Deaminase; Deamination; DNA Breaks, Double-Stranded; DNA Replication; DNA-(Apurinic or Apyrimidinic Site) Lyase; DNA-Binding Proteins; DNA-Directed DNA Polymerase; DNA, Single-Stranded; Endonucleases; Humans; Multifunctional Enzymes; Proteins; RNA Interference; RNA, Small Interfering; Uracil; Uracil-DNA Glycosidase

2020
Photocaged 5-(Hydroxymethyl)pyrimidine Nucleoside Phosphoramidites for Specific Photoactivatable Epigenetic Labeling of DNA.
    Organic letters, 2020, 11-20, Volume: 22, Issue:22

    Topics: 5-Methylcytosine; Deoxycytidine; DNA; Epigenesis, Genetic; Epigenomics; Molecular Structure; Oligonucleotides; Organophosphorus Compounds; Pyrimidine Nucleosides; Uracil; Uridine

2020
TET-Like Oxidation in 5-Methylcytosine and Derivatives: A Computational and Experimental Study.
    Chembiochem : a European journal of chemical biology, 2021, 12-02, Volume: 22, Issue:23

    Topics: 5-Methylcytosine; DNA; Humans; Iron Compounds; Kinetics; Models, Molecular; Molecular Structure; Oxidation-Reduction; Thermodynamics; Uracil

2021
Screening of glycosylase activity on oxidative derivatives of methylcytosine: Pedobacter heparinus SMUG2 as a formylcytosine- and carboxylcytosine-DNA glycosylase.
    DNA repair, 2022, Volume: 119

    Topics: 5-Methylcytosine; Cytosine; DNA; DNA Repair; Humans; Oxidative Stress; Pedobacter; Thymine; Thymine DNA Glycosylase; Uracil; Uracil-DNA Glycosidase

2022