Page last updated: 2024-08-21

2-aminopurine and oligonucleotides

2-aminopurine has been researched along with oligonucleotides in 66 studies

Research

Studies (66)

TimeframeStudies, this research(%)All Research%
pre-19900 (0.00)18.7374
1990's5 (7.58)18.2507
2000's38 (57.58)29.6817
2010's19 (28.79)24.3611
2020's4 (6.06)2.80

Authors

AuthorsStudies
Berglund, H; Gräslund, A; McLaughlin, LW; Nilsson, L; Patel, N; Rigler, R1
Efremova, EIu; Limborskaia, SA; Miasnikov, VA; Potapov, VK; Prosniak, MI; Sverdlov, ED; Veselovskaia, SI1
Evdokimov, AA; Hattman, S; Jen-Jacobson, L; Kossykh, VG; Malygin, EG; Petrov, NA; Zinoviev, VV1
Boudou, V; Busson, R; De Bouvere, B; Herdewijn, P; Kerremans, L; Lescrinier, E; Schepers, G; Van Aerschot, A1
Bradley, RK; Colbert, DT; Hardin, SH; Jones, LB; Reddy, MS; Smalley, RE; Ying, J1
Nordlund, TM; Xu, DG1
Giege, R; Petyuk, V; Potapov, V; Serikov, R; Tolstikov, V; Vlassov, V; Zenkova, M1
Osman, R; Rachofsky, EL; Ross, JB; Seibert, E; Stivers, JT1
Liu, C; Martin, CT1
Kontogiannis, L; Lilley, DM; Maxwell, K; Wilson, TJ; Zhao, ZY1
Fidanza, JA; McGall, GH1
Leumann, CJ; Parel, SP1
Evdokimov, AA; Hattman, S; Lindstrom, WM; Malygin, EG; Ovechkina, LG; Reich, NO; Schlagman, SL; Zinoviev, VV1
Alarcon, K; Carrez, D; Croisy, A; Demeunynck, M; Lhomme, J1
Baldwin, GS; Bellamy, SR1
Dillingham, MS; Webb, MR; Wigley, DB1
Delgado, G; Eschenmoser, A; Krishnamurthy, R; Wu, X1
Osman, R; Ross, JB; Seibert, E1
Jucker, FM; McCallum, SA; Pardi, A; Phillips, RM1
Cole, TD; Linn, S; Millar, DP; Rai, P; Thompson, E1
Loakes, D; Maehara, D; Nakamura, S; Negishi, K; Negishi, T; Schaaper, RM; Seio, K; Sekine, M; Worth, L1
Bruck, I; Goodman, MF; O'Donnell, M1
Baase, WA; Johnson, NP; Von Hippel, PH2
Arent, S; Frieden, M; Jensen, FR; Koch, T; Larsen, S; Pedersen, DS; Rosenbohm, C1
Koshkin, AA1
Ayida, BK; Han, Q; Hermann, T; Shandrick, S; Simonsen, KB; Takahashi, M; Vourloumis, D; Winters, GC; Zhao, Q1
Barun, O; Sommer, S; Waldmann, H1
Barton, JK; O'Neill, MA1
Crean, C; Geacintov, NE; Misiaszek, R; Shafirovich, V1
Dediulescu, DF; Dediulescu, L1
Arar, K; Gamper, HB; Gewirtz, A; Hou, YM1
Patel, SS; Tang, GQ1
Behlke, MA; Moreira, BG; Owczarzy, R; You, Y1
Kool, ET; Lai, J; Shuman, S; Yakovleva, L1
Avilov, SV; de Rocquigny, H; Mély, Y; Piemont, E; Shvadchak, V1
Brown, T; Lee, M; Mackay, H; Sielaff, A1
Bonnist, EY; Jones, AC1
Kurose, Y; Nagatsugi, F; Sasaki, S; Taniguchi, Y1
Haynes, C; Hughesman, CB; Turner, RF1
Augustyn, KE; Barton, JK; Davis, ML; Genereux, JC; Shao, F1
Arar, K; Gamper, H; Hou, YM; Lahoud, G1
Avilov, SV; Godet, J; Mély, Y; Piémont, E1
Barber, CA; Degtyareva, NN; Petty, JT; Sengupta, B1
Buscaglia, R; Dettler, JM; Lewis, EA; Nagesh, N1
Kierzek, E; Kierzek, R; Liang, R; Turner, DH1
Dallmann, A; Dehmel, L; Ernsting, NP; Griesinger, C; Mügge, C; Peters, T; Tuma, J1
Barber, CA; Degtyareva, NN; Petty, JT; Reddish, MJ1
Dumas, A; Luedtke, NW1
Crégut, O; Gelot, T; Haacke, S; Léonard, J; Tourón-Touceda, P1
Buscaglia, R; Chaires, JB; Gray, RD1
Kanamori, T; Masaki, Y; Ohkubo, A; Ohzeki, H; Seio, K; Sekine, M; Tokugawa, M; Tsunoda, H1
Cedillo, I; Gaus, HJ; Krishnamoorthy, SS; McPherson, AK; Mowery, BP; Rodriguez, AA1
Belogurov, GA; Malinen, AM; Turtola, M1
Nandakumar, D; Pandey, M; Patel, SS1
Anderson, BA; Hrdlicka, PJ1
Holroyd, LF; Jones, AC; Smith, DA; van Mourik, T1
Ding, J; Liu, J; Zhou, W1
Ding, J; Liu, J; Saran, R; Zhou, W1
Ariyoshi, J; Asanuma, H; Donoshita, Y; Kamimoto, H; Kamiya, Y; Murayama, K1
Cepeda-Plaza, M; Lu, Y; McGhee, CE1
Bansal, V; Kim, KK; Ravichandran, S; Subramani, VK1
Fujisaka, A; Kimura, S; Obika, S1
Asanuma, H; Kamiya, Y; Kodama, A; Murayama, K; Sato, F; Uchiyama, S1
Bichenkova, E; Chiglintseva, D; Gaponova, S; Mironova, N; Patutina, O; Vlassov, V; Zenkova, M1
Datta, D; Egli, M; Madaoui, M; Manoharan, M; Ross, BS; Wassarman, K; Zlatev, I1

Reviews

1 review(s) available for 2-aminopurine and oligonucleotides

ArticleYear
[Antiherpetic therapy].
    Oftalmologia (Bucharest, Romania : 1990), 2005, Volume: 49, Issue:1

    Topics: 2-Aminopurine; Acyclovir; Antiviral Agents; Bromodeoxyuridine; Cidofovir; Cytosine; Drug Combinations; Famciclovir; Foscarnet; Ganciclovir; Humans; Idoxuridine; Keratitis, Herpetic; Oligonucleotides; Ophthalmic Solutions; Organophosphonates; Treatment Outcome; Valacyclovir; Valine; Vidarabine

2005

Other Studies

65 other study(ies) available for 2-aminopurine and oligonucleotides

ArticleYear
Thermodynamics of interaction of a fluorescent DNA oligomer with the anti-tumour drug netropsin.
    European journal of biochemistry, 1992, Feb-01, Volume: 203, Issue:3

    Topics: 2-Aminopurine; Base Sequence; DNA; Fluorescence Polarization; Fluorescent Dyes; Molecular Sequence Data; Netropsin; Nucleic Acid Heteroduplexes; Oligonucleotides; Thermodynamics

1992
[Intensification of genomic dactyloscopy by means of hybridization with modified oligonucleotides, forming duplexes with increased stability].
    Bioorganicheskaia khimiia, 1993, Volume: 19, Issue:9

    Topics: 2-Aminopurine; 5-Methylcytosine; Cytosine; DNA Fingerprinting; Nucleic Acid Hybridization; Oligonucleotides

1993
Effect of base analog substitutions in the specific GATC site on binding and methylation of oligonucleotide duplexes by the bacteriophage T4 Dam DNA-[N6-adenine] methyltransferase.
    Nucleic acids research, 1999, Feb-15, Volume: 27, Issue:4

    Topics: 2-Aminopurine; Adenine; Bacteriophage T4; Binding Sites; DNA Methylation; Guanine; Kinetics; Mutagenesis, Site-Directed; Oligonucleotides; Purines; Site-Specific DNA-Methyltransferase (Adenine-Specific); Viral Proteins

1999
Base pairing of anhydrohexitol nucleosides with 2,6-diaminopurine, 5-methylcytosine and uracil asbase moiety.
    Nucleic acids research, 1999, Mar-15, Volume: 27, Issue:6

    Topics: 2-Aminopurine; 5-Methylcytosine; Arabinonucleosides; Base Pairing; Cytosine; Models, Molecular; Nucleic Acid Denaturation; Nucleosides; Oligonucleotides; Purine Nucleosides; Pyrimidine Nucleosides; Sugar Alcohols; Uracil

1999
Guanine-rich telomeric sequences stimulate DNA polymerase activity in vitro.
    Biochemistry, 1999, Dec-14, Volume: 38, Issue:50

    Topics: 2-Aminopurine; Animals; Base Pairing; Deoxyguanine Nucleotides; DNA; DNA Replication; DNA-Directed DNA Polymerase; Electrophoresis, Polyacrylamide Gel; Guanine; Humans; Hypotrichida; Oligonucleotides; Saccharomyces cerevisiae; Sequence Analysis, DNA; Telomere; Tetrahymena

1999
Sequence dependence of energy transfer in DNA oligonucleotides.
    Biophysical journal, 2000, Volume: 78, Issue:2

    Topics: 2-Aminopurine; Base Pairing; DNA; Electrons; Energy Transfer; Models, Theoretical; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Salts; Solvents; Spectrometry, Fluorescence; Temperature

2000
Invasion of strongly binding oligonucleotides into tRNA structure.
    Nucleosides, nucleotides & nucleic acids, 2000, Volume: 19, Issue:7

    Topics: 2-Aminopurine; 5-Methylcytosine; Cytosine; Deoxyuridine; Electrophoresis, Polyacrylamide Gel; Kinetics; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; RNA, Transfer, Phe; Time Factors; Yeasts

2000
Conformation and dynamics of abasic sites in DNA investigated by time-resolved fluorescence of 2-aminopurine.
    Biochemistry, 2001, Jan-30, Volume: 40, Issue:4

    Topics: 2-Aminopurine; Calcium; Carbon-Oxygen Lyases; Cations, Divalent; Deoxyribonuclease IV (Phage T4-Induced); DNA; DNA Damage; DNA Glycosylases; DNA Repair; DNA-(Apurinic or Apyrimidinic Site) Lyase; Escherichia coli; Escherichia coli Proteins; Kinetics; N-Glycosyl Hydrolases; Nucleic Acid Conformation; Oligonucleotides; Solutions; Spectrometry, Fluorescence; Thermodynamics; Titrimetry; Uracil-DNA Glycosidase

2001
Fluorescence characterization of the transcription bubble in elongation complexes of T7 RNA polymerase.
    Journal of molecular biology, 2001, May-04, Volume: 308, Issue:3

    Topics: 2-Aminopurine; Bacteriophage T7; Base Pairing; Base Sequence; Binding Sites; Deoxycytidine; DNA-Directed RNA Polymerases; DNA, Single-Stranded; Fluorescent Dyes; Nucleic Acid Denaturation; Nucleic Acid Hybridization; Oligonucleotides; Promoter Regions, Genetic; RNA; Spectrometry, Fluorescence; Templates, Genetic; Thermodynamics; Transcription, Genetic; Viral Proteins

2001
Importance of specific nucleotides in the folding of the natural form of the hairpin ribozyme.
    Biochemistry, 2001, Feb-20, Volume: 40, Issue:7

    Topics: 2-Aminopurine; Adenine; Base Composition; Base Sequence; Carbocyanines; Cytosine; Deoxyribonucleosides; Energy Transfer; Fluorescein; Fluorescent Dyes; Guanine; Hydrolysis; Molecular Sequence Data; Nepovirus; Nucleic Acid Conformation; Oligonucleotides; Point Mutation; Purine Nucleotides; Ribose; RNA, Catalytic; Spectrometry, Fluorescence; Uridine

2001
Photolithographic synthesis of high-density oligonucleotide arrays.
    Methods in molecular biology (Clifton, N.J.), 2001, Volume: 170

    Topics: 2-Aminopurine; Amides; Combinatorial Chemistry Techniques; Membrane Glycoproteins; Oligonucleotide Array Sequence Analysis; Oligonucleotides; Phosphoric Acids; Photolysis; Purine Nucleosides

2001
Triple-helix formation in the antiparallel binding motif of oligodeoxynucleotides containing N(9)- and N(7)-2-aminopurine deoxynucleosides.
    Nucleic acids research, 2001, Jun-01, Volume: 29, Issue:11

    Topics: 2-Aminopurine; Deoxyribonuclease I; DNA Footprinting; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Purine Nucleosides; Spectrophotometry, Ultraviolet; Thermodynamics

2001
A dual role for substrate S-adenosyl-L-methionine in the methylation reaction with bacteriophage T4 Dam DNA-[N6-adenine]-methyltransferase.
    Nucleic acids research, 2001, Jun-01, Volume: 29, Issue:11

    Topics: 2-Aminopurine; Bacteriophage T4; Base Sequence; Binding Sites; Cross-Linking Reagents; DNA; DNA Methylation; Fluorescence; Glutaral; Kinetics; Nucleic Acid Conformation; Oligonucleotides; Protein Binding; S-Adenosylhomocysteine; S-Adenosylmethionine; Site-Specific DNA-Methyltransferase (Adenine-Specific); Spectrometry, Fluorescence; Substrate Specificity; Time Factors; Viral Proteins

2001
Diaminopurine-acridine heterodimers for specific recognition of abasic site containing DNA. Influence on the biological activity of the position of the linker on the purine ring.
    Bioorganic & medicinal chemistry letters, 2001, Jul-23, Volume: 11, Issue:14

    Topics: 2-Aminopurine; Acridines; Animals; Base Sequence; Carmustine; Cell Line; Dimerization; DNA Damage; Inhibitory Concentration 50; Intercalating Agents; Nucleic Acid Denaturation; Oligonucleotides; Purines; Thermodynamics

2001
A kinetic analysis of substrate recognition by uracil-DNA glycosylase from herpes simplex virus type 1.
    Nucleic acids research, 2001, Sep-15, Volume: 29, Issue:18

    Topics: 2-Aminopurine; Amino Acid Substitution; Base Sequence; DNA Glycosylases; Fluorescence; Herpesvirus 1, Human; Kinetics; Mutation; N-Glycosyl Hydrolases; Oligonucleotides; Protein Binding; Substrate Specificity; Uracil; Uracil-DNA Glycosidase

2001
Direct measurement of single-stranded DNA translocation by PcrA helicase using the fluorescent base analogue 2-aminopurine.
    Biochemistry, 2002, Jan-15, Volume: 41, Issue:2

    Topics: 2-Aminopurine; Adenosine Triphosphate; Bacterial Proteins; DNA Helicases; DNA, Single-Stranded; Geobacillus stearothermophilus; Kinetics; Models, Biological; Oligonucleotides; Protein Binding; Protein Transport; Spectrometry, Fluorescence; Time Factors

2002
2,6-diaminopurine in TNA: effect on duplex stabilities and on the efficiency of template-controlled ligations.
    Organic letters, 2002, Apr-18, Volume: 4, Issue:8

    Topics: 2-Aminopurine; Base Pairing; Chromatography, High Pressure Liquid; Crystallography, X-Ray; DNA; Furans; Ligands; Mass Spectrometry; Oligonucleotides; RNA; Spectrophotometry, Ultraviolet; Templates, Genetic

2002
Role of DNA flexibility in sequence-dependent activity of uracil DNA glycosylase.
    Biochemistry, 2002, Sep-10, Volume: 41, Issue:36

    Topics: 2-Aminopurine; Bacterial Proteins; Base Sequence; DNA; DNA Glycosylases; Enzyme Activation; Escherichia coli; Fluorescent Dyes; Kinetics; N-Glycosyl Hydrolases; Nucleic Acid Conformation; Oligonucleotides; Spectrometry, Fluorescence; Spectrophotometry; Thermodynamics; Uracil; Uracil-DNA Glycosidase

2002
Role of a heterogeneous free state in the formation of a specific RNA-theophylline complex.
    Biochemistry, 2003, Mar-11, Volume: 42, Issue:9

    Topics: 2-Aminopurine; Binding Sites; Cations, Divalent; Computer Simulation; Kinetics; Ligands; Macromolecular Substances; Magnesium; Models, Chemical; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; RNA; RNA Stability; Software; Spectrometry, Fluorescence; Theophylline

2003
Steady-state and time-resolved fluorescence studies indicate an unusual conformation of 2-aminopurine within ATAT and TATA duplex DNA sequences.
    Nucleic acids research, 2003, May-01, Volume: 31, Issue:9

    Topics: 2-Aminopurine; Base Pairing; Base Sequence; DNA; Nucleic Acid Conformation; Oligonucleotides; Spectrometry, Fluorescence; Thermodynamics

2003
Binding specificities of the mismatch binding protein, MutS, to oligonucleotides containing modified bases.
    Nucleic acids research. Supplement (2001), 2001, Issue:1

    Topics: 2-Aminopurine; Adenosine Triphosphatases; Bacterial Proteins; Base Pair Mismatch; Base Sequence; Cytidine; Deoxyribonucleosides; DNA-Binding Proteins; Escherichia coli Proteins; MutS DNA Mismatch-Binding Protein; Nucleic Acid Heteroduplexes; Oligonucleotides

2001
The essential C family DnaE polymerase is error-prone and efficient at lesion bypass.
    The Journal of biological chemistry, 2003, Nov-07, Volume: 278, Issue:45

    Topics: 2-Aminopurine; 8-Hydroxy-2'-Deoxyguanosine; Base Pair Mismatch; Base Sequence; Deoxyguanosine; DNA; DNA Polymerase III; DNA Primers; Escherichia coli; Escherichia coli Proteins; Kinetics; Oligonucleotides; Streptococcus pyogenes; Substrate Specificity; Templates, Genetic; Thymine Nucleotides

2003
Low-energy circular dichroism of 2-aminopurine dinucleotide as a probe of local conformation of DNA and RNA.
    Proceedings of the National Academy of Sciences of the United States of America, 2004, Mar-09, Volume: 101, Issue:10

    Topics: 2-Aminopurine; Base Sequence; Circular Dichroism; DNA; Nucleic Acid Conformation; Oligonucleotides; RNA; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet; Thermodynamics

2004
LNA guanine and 2,6-diaminopurine. Synthesis, characterization and hybridization properties of LNA 2,6-diaminopurine containing oligonucleotides.
    Bioorganic & medicinal chemistry, 2004, May-01, Volume: 12, Issue:9

    Topics: 2-Aminopurine; Guanine; Magnetic Resonance Spectroscopy; Nucleic Acid Hybridization; Oligonucleotides; Spectrometry, Mass, Electrospray Ionization

2004
Syntheses and base-pairing properties of locked nucleic acid nucleotides containing hypoxanthine, 2,6-diaminopurine, and 2-aminopurine nucleobases.
    The Journal of organic chemistry, 2004, May-28, Volume: 69, Issue:11

    Topics: 2-Aminopurine; Base Pairing; Hypoxanthine; Nucleic Acid Conformation; Oligonucleotides; Oligonucleotides, Antisense

2004
Monitoring molecular recognition of the ribosomal decoding site.
    Angewandte Chemie (International ed. in English), 2004, Jun-14, Volume: 43, Issue:24

    Topics: 2-Aminopurine; Aminoglycosides; Anti-Bacterial Agents; Crystallization; Crystallography, X-Ray; Gene Targeting; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Ribosomes; RNA, Bacterial; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet

2004
Asymmetric solid-phase synthesis of 6,6-spiroketals.
    Angewandte Chemie (International ed. in English), 2004, Jun-14, Volume: 43, Issue:24

    Topics: 2-Aminopurine; Aminoglycosides; Anti-Bacterial Agents; Crystallization; Crystallography, X-Ray; Gene Targeting; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Pyrans; Ribosomes; RNA, Bacterial; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet; Spiro Compounds

2004
DNA charge transport: conformationally gated hopping through stacked domains.
    Journal of the American Chemical Society, 2004, Sep-22, Volume: 126, Issue:37

    Topics: 2-Aminopurine; Base Pairing; Base Sequence; DNA; Guanine; Nucleic Acid Conformation; Oligonucleotides; Photochemistry; Spectrometry, Fluorescence; Static Electricity; Temperature

2004
Combination of nitrogen dioxide radicals with 8-oxo-7,8-dihydroguanine and guanine radicals in DNA: oxidation and nitration end-products.
    Journal of the American Chemical Society, 2005, Feb-23, Volume: 127, Issue:7

    Topics: 2-Aminopurine; Chromatography, High Pressure Liquid; DNA; Free Radicals; Guanine; Isotope Labeling; Kinetics; Nitrogen Dioxide; Oligonucleotides; Oxidation-Reduction; Oxygen Isotopes; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization

2005
Low energy CD of RNA hairpin unveils a loop conformation required for lambdaN antitermination activity.
    The Journal of biological chemistry, 2005, Sep-16, Volume: 280, Issue:37

    Topics: 2-Aminopurine; Bacterial Proteins; Biophysics; Circular Dichroism; DNA-Directed RNA Polymerases; Escherichia coli; Magnetic Resonance Spectroscopy; Microscopy, Fluorescence; Models, Chemical; Nucleic Acid Conformation; Oligonucleotides; Peptides; Protein Conformation; RNA; RNA-Binding Proteins; RNA, Double-Stranded; Temperature

2005
Unrestricted accessibility of short oligonucleotides to RNA.
    RNA (New York, N.Y.), 2005, Volume: 11, Issue:9

    Topics: 2-Aminopurine; Base Pairing; Guanine; Hypoxanthine; Nucleic Acid Conformation; Nucleic Acid Hybridization; Oligonucleotides; RNA; RNA Probes; Temperature; Thiouracil

2005
T7 RNA polymerase-induced bending of promoter DNA is coupled to DNA opening.
    Biochemistry, 2006, Apr-18, Volume: 45, Issue:15

    Topics: 2-Aminopurine; DNA; DNA-Directed RNA Polymerases; Fluorescence Polarization; Fluorescence Resonance Energy Transfer; Fluorescent Dyes; Guanosine Triphosphate; Nucleic Acid Conformation; Oligonucleotides; Promoter Regions, Genetic; Thermodynamics; Viral Proteins

2006
Design of LNA probes that improve mismatch discrimination.
    Nucleic acids research, 2006, May-02, Volume: 34, Issue:8

    Topics: 2-Aminopurine; Base Pair Mismatch; DNA; Fluorescence; Magnesium; Nucleic Acid Denaturation; Nucleic Acid Probes; Oligonucleotides; Oligonucleotides, Antisense; Sodium; Temperature

2006
Nonpolar nucleobase analogs illuminate requirements for site-specific DNA cleavage by vaccinia topoisomerase.
    The Journal of biological chemistry, 2006, Nov-24, Volume: 281, Issue:47

    Topics: 2-Aminopurine; Base Sequence; DNA; DNA Topoisomerases, Type I; Guanine; Indoles; Models, Molecular; Molecular Sequence Data; Oligonucleotides; Protein Binding; Recombinant Proteins; Toluene; Tyrosine; Vaccinia virus

2006
Probing dynamics of HIV-1 nucleocapsid protein/target hexanucleotide complexes by 2-aminopurine.
    Nucleic acids research, 2008, Volume: 36, Issue:3

    Topics: 2-Aminopurine; Amino Acid Sequence; Fluorescent Dyes; gag Gene Products, Human Immunodeficiency Virus; HIV-1; Models, Molecular; Molecular Sequence Data; Mutation; Oligonucleotides; RNA, Viral; Spectrometry, Fluorescence

2008
2-Aminopurine/cytosine base pair containing oligonucleotides: fluorescence spectroscopy studies on DNA-polyamide binding.
    Biochemical and biophysical research communications, 2008, May-02, Volume: 369, Issue:2

    Topics: 2-Aminopurine; Base Pairing; Binding Sites; Cytosine; DNA; Nylons; Oligonucleotides; Spectrometry, Fluorescence

2008
Long-wavelength fluorescence from 2-aminopurine-nucleobase dimers in DNA.
    Chemphyschem : a European journal of chemical physics and physical chemistry, 2008, Jun-02, Volume: 9, Issue:8

    Topics: 2-Aminopurine; Base Sequence; Dimerization; DNA; Fluorescence; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Solutions; Spectrometry, Fluorescence; Temperature

2008
Synthesis of the new nucleoside analogue connecting 2-amino-6-vinylpurine to the 2'-deoxyribose skeleton via the methylene linker.
    Nucleic acids symposium series (2004), 2008, Issue:52

    Topics: 2-Aminopurine; Cross-Linking Reagents; Deoxyribose; Oligonucleotides; Purine Nucleosides; Purines; Vinyl Compounds

2008
Stability and mismatch discrimination of DNA duplexes containing 2,6-diaminopurine and 2-thiothymidine locked nucleic acid bases.
    Nucleic acids symposium series (2004), 2008, Issue:52

    Topics: 2-Aminopurine; Base Pair Mismatch; Calorimetry, Differential Scanning; DNA; Oligonucleotide Probes; Oligonucleotides; Spectrophotometry, Ultraviolet; Thermodynamics; Thymidine

2008
Back-electron transfer suppresses the periodic length dependence of DNA-mediated charge transport across adenine tracts.
    Journal of the American Chemical Society, 2008, Nov-12, Volume: 130, Issue:45

    Topics: 2-Aminopurine; Adenine; Anthraquinones; Base Sequence; DNA; Electrons; Models, Molecular; Oligonucleotides; Oxidation-Reduction; Quantum Theory; Rhodium

2008
RecA-mediated strand invasion of DNA by oligonucleotides substituted with 2-aminoadenine and 2-thiothymine.
    Nucleic acids research, 2008, Volume: 36, Issue:21

    Topics: 2-Aminopurine; Adenosine Triphosphate; Base Pair Mismatch; Base Pairing; DNA; Models, Genetic; Nucleic Acid Hybridization; Oligodeoxyribonucleotides; Oligonucleotides; Peptide Nucleic Acids; Rec A Recombinases; Recombination, Genetic; Thymine

2008
Site-specific characterization of HIV-1 nucleocapsid protein binding to oligonucleotides with two binding sites.
    Biochemistry, 2009, Mar-24, Volume: 48, Issue:11

    Topics: 2-Aminopurine; Amino Acid Motifs; Amino Acid Sequence; Binding Sites; gag Gene Products, Human Immunodeficiency Virus; HIV-1; Kinetics; Molecular Sequence Data; Oligonucleotides; Protein Binding

2009
Context dependence of trinucleotide repeat structures.
    Biochemistry, 2010, Apr-13, Volume: 49, Issue:14

    Topics: 2-Aminopurine; Acrylamide; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Spectrometry, Fluorescence; Transition Temperature; Trinucleotide Repeat Expansion; Trinucleotide Repeats

2010
Studies on the site and mode of TMPyP4 interactions with Bcl-2 promoter sequence G-Quadruplexes.
    Biophysical journal, 2010, Jun-02, Volume: 98, Issue:11

    Topics: 2-Aminopurine; Absorption; Base Sequence; Calorimetry; Calorimetry, Differential Scanning; Circular Dichroism; Fluorescence; G-Quadruplexes; Mutation, Missense; Nonlinear Dynamics; Nucleic Acid Conformation; Oligonucleotides; Porphyrins; Promoter Regions, Genetic; Proto-Oncogene Proteins c-bcl-2; Regression Analysis; Spectrum Analysis; Temperature; Thermodynamics; Ultraviolet Rays

2010
Comparisons between chemical mapping and binding to isoenergetic oligonucleotide microarrays reveal unexpected patterns of binding to the Bacillus subtilis RNase P RNA specificity domain.
    Biochemistry, 2010, Sep-21, Volume: 49, Issue:37

    Topics: 2-Aminopurine; Bacillus subtilis; Binding Sites; Oligonucleotide Array Sequence Analysis; Oligonucleotide Probes; Oligonucleotides; Ribonuclease P; RNA; Sensitivity and Specificity

2010
2-Aminopurine incorporation perturbs the dynamics and structure of DNA.
    Angewandte Chemie (International ed. in English), 2010, Aug-09, Volume: 49, Issue:34

    Topics: 2-Aminopurine; Base Pairing; Base Sequence; Isomerism; Magnetic Resonance Spectroscopy; Nucleic Acid Conformation; Oligonucleotides; Spectrophotometry, Ultraviolet; Transition Temperature

2010
Sequence length dictates repeated CAG folding in three-way junctions.
    Biochemistry, 2011, Feb-01, Volume: 50, Issue:4

    Topics: 2-Aminopurine; Base Pairing; DNA Repeat Expansion; DNA Replication; Humans; Molecular Sequence Data; Nucleic Acid Conformation; Nucleic Acid Heteroduplexes; Oligonucleotides; Repetitive Sequences, Nucleic Acid; Sequence Analysis, DNA; Thermodynamics; Trinucleotide Repeats

2011
Fluorescence properties of 8-(2-pyridyl)guanine "2PyG" as compared to 2-aminopurine in DNA.
    Chembiochem : a European journal of chemical biology, 2011, Sep-05, Volume: 12, Issue:13

    Topics: 2-Aminopurine; Circular Dichroism; DNA; Fluorescence; G-Quadruplexes; Guanine; Guanosine Monophosphate; Humans; Nucleic Acid Conformation; Nucleosides; Oligonucleotides; Quantum Theory; Thermodynamics

2011
Ultrafast site-specific fluorescence quenching of 2-aminopurine in a DNA hairpin studied by femtosecond down-conversion.
    The journal of physical chemistry. A, 2012, Mar-22, Volume: 116, Issue:11

    Topics: 2-Aminopurine; DNA, Viral; Fluorescence; Guanine; HIV-1; Humans; Inverted Repeat Sequences; Kinetics; Nucleic Acid Conformation; Oligonucleotides; Signal-To-Noise Ratio; Solutions; Spectrometry, Fluorescence; Thermodynamics; Time Factors

2012
Populated intermediates in the thermal unfolding of the human telomeric quadruplex.
    Journal of the American Chemical Society, 2012, Oct-10, Volume: 134, Issue:40

    Topics: 2-Aminopurine; Base Sequence; Circular Dichroism; Fluorescence Resonance Energy Transfer; Humans; Models, Molecular; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Telomere; Temperature

2012
Fluorescent properties of oligonucleotides doubly modified with an indole-fused cytosine analog and 2-aminopurine.
    Bioorganic & medicinal chemistry, 2013, Jun-01, Volume: 21, Issue:11

    Topics: 2-Aminopurine; Base Sequence; Cytosine; Fluorescent Dyes; Indoles; Molecular Imaging; Molecular Sequence Data; Oligonucleotides; Spectrometry, Fluorescence; Staining and Labeling

2013
Formation of the N(2)-acetyl-2,6-diaminopurine oligonucleotide impurity caused by acetyl capping.
    Bioorganic & medicinal chemistry letters, 2014, Aug-01, Volume: 24, Issue:15

    Topics: 2-Aminopurine; Molecular Structure; Oligonucleotides

2014
Monitoring translocation of multisubunit RNA polymerase along the DNA with fluorescent base analogues.
    Methods in molecular biology (Clifton, N.J.), 2015, Volume: 1276

    Topics: 2-Aminopurine; Adenine; DNA; DNA-Directed RNA Polymerases; Escherichia coli; Fluorescence; Guanine; Molecular Biology; Molecular Structure; Oligonucleotides; Spectrometry, Fluorescence; Transcription, Genetic; Xanthopterin

2015
Cooperative base pair melting by helicase and polymerase positioned one nucleotide from each other.
    eLife, 2015, May-13, Volume: 4

    Topics: 2-Aminopurine; DNA Helicases; DNA Primase; DNA Replication; DNA-Directed DNA Polymerase; Escherichia coli; Fluorescence; Kinetics; Models, Biological; Nucleic Acid Denaturation; Oligonucleotides

2015
Merging Two Strategies for Mixed-Sequence Recognition of Double-Stranded DNA: Pseudocomplementary Invader Probes.
    The Journal of organic chemistry, 2016, Apr-15, Volume: 81, Issue:8

    Topics: 2-Aminopurine; Base Pairing; DNA; Molecular Biology; Nucleic Acids; Oligonucleotides; Peptide Nucleic Acids; Thermodynamics; Thymine

2016
A DFT study of 2-aminopurine-containing dinucleotides: prediction of stacked conformations with B-DNA structure.
    Physical chemistry chemical physics : PCCP, 2016, 05-25, Volume: 18, Issue:21

    Topics: 2-Aminopurine; Dinucleoside Phosphates; DNA, B-Form; Molecular Dynamics Simulation; Nucleic Acid Conformation; Oligonucleotides; Thermodynamics

2016
A highly specific sodium aptamer probed by 2-aminopurine for robust Na+ sensing.
    Nucleic acids research, 2016, Dec-01, Volume: 44, Issue:21

    Topics: 2-Aminopurine; Aptamers, Nucleotide; Base Pairing; Biosensing Techniques; DNA, Catalytic; Mutation; Nucleic Acid Conformation; Oligonucleotides; Reproducibility of Results; Sensitivity and Specificity; Sodium; Spectrometry, Fluorescence

2016
Two Completely Different Mechanisms for Highly Specific Na
    Chembiochem : a European journal of chemical biology, 2017, 09-19, Volume: 18, Issue:18

    Topics: 2-Aminopurine; Base Sequence; Biocatalysis; DNA, Catalytic; Ions; Nucleic Acid Conformation; Oligonucleotides; Phosphates; Sodium; Spectrometry, Fluorescence

2017
Introduction of 2,6-Diaminopurines into Serinol Nucleic Acid Improves Anti-miRNA Performance.
    Chembiochem : a European journal of chemical biology, 2017, 10-05, Volume: 18, Issue:19

    Topics: 2-Aminopurine; HeLa Cells; Humans; MicroRNAs; Nucleic Acids; Oligonucleotides; Propanolamines; Propylene Glycols

2017
Evidence of a General Acid-Base Catalysis Mechanism in the 8-17 DNAzyme.
    Biochemistry, 2018, 03-06, Volume: 57, Issue:9

    Topics: 2-Aminopurine; Base Sequence; Catalytic Domain; DNA, Catalytic; Hydrogen-Ion Concentration; Inosine; Kinetics; Oligonucleotides; RNA; Structure-Activity Relationship

2018
Chemical-induced formation of BZ-junction with base extrusion.
    Biochemical and biophysical research communications, 2019, 01-22, Volume: 508, Issue:4

    Topics: 2-Aminopurine; Cold Temperature; DNA, B-Form; DNA, Z-Form; Hot Temperature; Nucleic Acid Conformation; Oligonucleotides

2019
Nucleobase derivatives induce in-source decay of oligonucleotides as new matrix-assisted laser desorption/ionization matrices.
    Rapid communications in mass spectrometry : RCM, 2020, Mar-30, Volume: 34, Issue:6

    Topics: 2-Aminopurine; DNA; Oligonucleotides; RNA; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Thioguanine

2020
Incorporation of Pseudo-complementary Bases 2,6-Diaminopurine and 2-Thiouracil into Serinol Nucleic Acid (SNA) to Promote SNA/RNA Hybridization.
    Chemistry, an Asian journal, 2020, Apr-17, Volume: 15, Issue:8

    Topics: 2-Aminopurine; Base Pairing; Hydrogen Bonding; Nucleic Acid Hybridization; Oligonucleotides; Phase Transition; Propanolamines; Propylene Glycols; RNA; Thiouracil; Transition Temperature

2020
Dual miRNases for Triple Incision of miRNA Target: Design Concept and Catalytic Performance.
    Molecules (Basel, Switzerland), 2020, May-25, Volume: 25, Issue:10

    Topics: 2-Aminopurine; Base Sequence; Biocatalysis; Catalytic Domain; Humans; Hydrogen-Ion Concentration; MicroRNAs; Oligonucleotides; Peptides; Ribonucleases; RNA Stability

2020
A Chemical Approach to Introduce 2,6-Diaminopurine and 2-Aminoadenine Conjugates into Oligonucleotides without Need for Protecting Groups.
    Organic letters, 2022, 08-26, Volume: 24, Issue:33

    Topics: 2-Aminopurine; Adenine; Oligonucleotides

2022