2-aminopurine has been researched along with oligonucleotides in 66 studies
Timeframe | Studies, this research(%) | All Research% |
---|---|---|
pre-1990 | 0 (0.00) | 18.7374 |
1990's | 5 (7.58) | 18.2507 |
2000's | 38 (57.58) | 29.6817 |
2010's | 19 (28.79) | 24.3611 |
2020's | 4 (6.06) | 2.80 |
Authors | Studies |
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Berglund, H; Gräslund, A; McLaughlin, LW; Nilsson, L; Patel, N; Rigler, R | 1 |
Efremova, EIu; Limborskaia, SA; Miasnikov, VA; Potapov, VK; Prosniak, MI; Sverdlov, ED; Veselovskaia, SI | 1 |
Evdokimov, AA; Hattman, S; Jen-Jacobson, L; Kossykh, VG; Malygin, EG; Petrov, NA; Zinoviev, VV | 1 |
Boudou, V; Busson, R; De Bouvere, B; Herdewijn, P; Kerremans, L; Lescrinier, E; Schepers, G; Van Aerschot, A | 1 |
Bradley, RK; Colbert, DT; Hardin, SH; Jones, LB; Reddy, MS; Smalley, RE; Ying, J | 1 |
Nordlund, TM; Xu, DG | 1 |
Giege, R; Petyuk, V; Potapov, V; Serikov, R; Tolstikov, V; Vlassov, V; Zenkova, M | 1 |
Osman, R; Rachofsky, EL; Ross, JB; Seibert, E; Stivers, JT | 1 |
Liu, C; Martin, CT | 1 |
Kontogiannis, L; Lilley, DM; Maxwell, K; Wilson, TJ; Zhao, ZY | 1 |
Fidanza, JA; McGall, GH | 1 |
Leumann, CJ; Parel, SP | 1 |
Evdokimov, AA; Hattman, S; Lindstrom, WM; Malygin, EG; Ovechkina, LG; Reich, NO; Schlagman, SL; Zinoviev, VV | 1 |
Alarcon, K; Carrez, D; Croisy, A; Demeunynck, M; Lhomme, J | 1 |
Baldwin, GS; Bellamy, SR | 1 |
Dillingham, MS; Webb, MR; Wigley, DB | 1 |
Delgado, G; Eschenmoser, A; Krishnamurthy, R; Wu, X | 1 |
Osman, R; Ross, JB; Seibert, E | 1 |
Jucker, FM; McCallum, SA; Pardi, A; Phillips, RM | 1 |
Cole, TD; Linn, S; Millar, DP; Rai, P; Thompson, E | 1 |
Loakes, D; Maehara, D; Nakamura, S; Negishi, K; Negishi, T; Schaaper, RM; Seio, K; Sekine, M; Worth, L | 1 |
Bruck, I; Goodman, MF; O'Donnell, M | 1 |
Baase, WA; Johnson, NP; Von Hippel, PH | 2 |
Arent, S; Frieden, M; Jensen, FR; Koch, T; Larsen, S; Pedersen, DS; Rosenbohm, C | 1 |
Koshkin, AA | 1 |
Ayida, BK; Han, Q; Hermann, T; Shandrick, S; Simonsen, KB; Takahashi, M; Vourloumis, D; Winters, GC; Zhao, Q | 1 |
Barun, O; Sommer, S; Waldmann, H | 1 |
Barton, JK; O'Neill, MA | 1 |
Crean, C; Geacintov, NE; Misiaszek, R; Shafirovich, V | 1 |
Dediulescu, DF; Dediulescu, L | 1 |
Arar, K; Gamper, HB; Gewirtz, A; Hou, YM | 1 |
Patel, SS; Tang, GQ | 1 |
Behlke, MA; Moreira, BG; Owczarzy, R; You, Y | 1 |
Kool, ET; Lai, J; Shuman, S; Yakovleva, L | 1 |
Avilov, SV; de Rocquigny, H; Mély, Y; Piemont, E; Shvadchak, V | 1 |
Brown, T; Lee, M; Mackay, H; Sielaff, A | 1 |
Bonnist, EY; Jones, AC | 1 |
Kurose, Y; Nagatsugi, F; Sasaki, S; Taniguchi, Y | 1 |
Haynes, C; Hughesman, CB; Turner, RF | 1 |
Augustyn, KE; Barton, JK; Davis, ML; Genereux, JC; Shao, F | 1 |
Arar, K; Gamper, H; Hou, YM; Lahoud, G | 1 |
Avilov, SV; Godet, J; Mély, Y; Piémont, E | 1 |
Barber, CA; Degtyareva, NN; Petty, JT; Sengupta, B | 1 |
Buscaglia, R; Dettler, JM; Lewis, EA; Nagesh, N | 1 |
Kierzek, E; Kierzek, R; Liang, R; Turner, DH | 1 |
Dallmann, A; Dehmel, L; Ernsting, NP; Griesinger, C; Mügge, C; Peters, T; Tuma, J | 1 |
Barber, CA; Degtyareva, NN; Petty, JT; Reddish, MJ | 1 |
Dumas, A; Luedtke, NW | 1 |
Crégut, O; Gelot, T; Haacke, S; Léonard, J; Tourón-Touceda, P | 1 |
Buscaglia, R; Chaires, JB; Gray, RD | 1 |
Kanamori, T; Masaki, Y; Ohkubo, A; Ohzeki, H; Seio, K; Sekine, M; Tokugawa, M; Tsunoda, H | 1 |
Cedillo, I; Gaus, HJ; Krishnamoorthy, SS; McPherson, AK; Mowery, BP; Rodriguez, AA | 1 |
Belogurov, GA; Malinen, AM; Turtola, M | 1 |
Nandakumar, D; Pandey, M; Patel, SS | 1 |
Anderson, BA; Hrdlicka, PJ | 1 |
Holroyd, LF; Jones, AC; Smith, DA; van Mourik, T | 1 |
Ding, J; Liu, J; Zhou, W | 1 |
Ding, J; Liu, J; Saran, R; Zhou, W | 1 |
Ariyoshi, J; Asanuma, H; Donoshita, Y; Kamimoto, H; Kamiya, Y; Murayama, K | 1 |
Cepeda-Plaza, M; Lu, Y; McGhee, CE | 1 |
Bansal, V; Kim, KK; Ravichandran, S; Subramani, VK | 1 |
Fujisaka, A; Kimura, S; Obika, S | 1 |
Asanuma, H; Kamiya, Y; Kodama, A; Murayama, K; Sato, F; Uchiyama, S | 1 |
Bichenkova, E; Chiglintseva, D; Gaponova, S; Mironova, N; Patutina, O; Vlassov, V; Zenkova, M | 1 |
Datta, D; Egli, M; Madaoui, M; Manoharan, M; Ross, BS; Wassarman, K; Zlatev, I | 1 |
1 review(s) available for 2-aminopurine and oligonucleotides
Article | Year |
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[Antiherpetic therapy].
Topics: 2-Aminopurine; Acyclovir; Antiviral Agents; Bromodeoxyuridine; Cidofovir; Cytosine; Drug Combinations; Famciclovir; Foscarnet; Ganciclovir; Humans; Idoxuridine; Keratitis, Herpetic; Oligonucleotides; Ophthalmic Solutions; Organophosphonates; Treatment Outcome; Valacyclovir; Valine; Vidarabine | 2005 |
65 other study(ies) available for 2-aminopurine and oligonucleotides
Article | Year |
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Thermodynamics of interaction of a fluorescent DNA oligomer with the anti-tumour drug netropsin.
Topics: 2-Aminopurine; Base Sequence; DNA; Fluorescence Polarization; Fluorescent Dyes; Molecular Sequence Data; Netropsin; Nucleic Acid Heteroduplexes; Oligonucleotides; Thermodynamics | 1992 |
[Intensification of genomic dactyloscopy by means of hybridization with modified oligonucleotides, forming duplexes with increased stability].
Topics: 2-Aminopurine; 5-Methylcytosine; Cytosine; DNA Fingerprinting; Nucleic Acid Hybridization; Oligonucleotides | 1993 |
Effect of base analog substitutions in the specific GATC site on binding and methylation of oligonucleotide duplexes by the bacteriophage T4 Dam DNA-[N6-adenine] methyltransferase.
Topics: 2-Aminopurine; Adenine; Bacteriophage T4; Binding Sites; DNA Methylation; Guanine; Kinetics; Mutagenesis, Site-Directed; Oligonucleotides; Purines; Site-Specific DNA-Methyltransferase (Adenine-Specific); Viral Proteins | 1999 |
Base pairing of anhydrohexitol nucleosides with 2,6-diaminopurine, 5-methylcytosine and uracil asbase moiety.
Topics: 2-Aminopurine; 5-Methylcytosine; Arabinonucleosides; Base Pairing; Cytosine; Models, Molecular; Nucleic Acid Denaturation; Nucleosides; Oligonucleotides; Purine Nucleosides; Pyrimidine Nucleosides; Sugar Alcohols; Uracil | 1999 |
Guanine-rich telomeric sequences stimulate DNA polymerase activity in vitro.
Topics: 2-Aminopurine; Animals; Base Pairing; Deoxyguanine Nucleotides; DNA; DNA Replication; DNA-Directed DNA Polymerase; Electrophoresis, Polyacrylamide Gel; Guanine; Humans; Hypotrichida; Oligonucleotides; Saccharomyces cerevisiae; Sequence Analysis, DNA; Telomere; Tetrahymena | 1999 |
Sequence dependence of energy transfer in DNA oligonucleotides.
Topics: 2-Aminopurine; Base Pairing; DNA; Electrons; Energy Transfer; Models, Theoretical; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Salts; Solvents; Spectrometry, Fluorescence; Temperature | 2000 |
Invasion of strongly binding oligonucleotides into tRNA structure.
Topics: 2-Aminopurine; 5-Methylcytosine; Cytosine; Deoxyuridine; Electrophoresis, Polyacrylamide Gel; Kinetics; Nucleic Acid Conformation; Oligodeoxyribonucleotides; Oligonucleotides; RNA, Transfer, Phe; Time Factors; Yeasts | 2000 |
Conformation and dynamics of abasic sites in DNA investigated by time-resolved fluorescence of 2-aminopurine.
Topics: 2-Aminopurine; Calcium; Carbon-Oxygen Lyases; Cations, Divalent; Deoxyribonuclease IV (Phage T4-Induced); DNA; DNA Damage; DNA Glycosylases; DNA Repair; DNA-(Apurinic or Apyrimidinic Site) Lyase; Escherichia coli; Escherichia coli Proteins; Kinetics; N-Glycosyl Hydrolases; Nucleic Acid Conformation; Oligonucleotides; Solutions; Spectrometry, Fluorescence; Thermodynamics; Titrimetry; Uracil-DNA Glycosidase | 2001 |
Fluorescence characterization of the transcription bubble in elongation complexes of T7 RNA polymerase.
Topics: 2-Aminopurine; Bacteriophage T7; Base Pairing; Base Sequence; Binding Sites; Deoxycytidine; DNA-Directed RNA Polymerases; DNA, Single-Stranded; Fluorescent Dyes; Nucleic Acid Denaturation; Nucleic Acid Hybridization; Oligonucleotides; Promoter Regions, Genetic; RNA; Spectrometry, Fluorescence; Templates, Genetic; Thermodynamics; Transcription, Genetic; Viral Proteins | 2001 |
Importance of specific nucleotides in the folding of the natural form of the hairpin ribozyme.
Topics: 2-Aminopurine; Adenine; Base Composition; Base Sequence; Carbocyanines; Cytosine; Deoxyribonucleosides; Energy Transfer; Fluorescein; Fluorescent Dyes; Guanine; Hydrolysis; Molecular Sequence Data; Nepovirus; Nucleic Acid Conformation; Oligonucleotides; Point Mutation; Purine Nucleotides; Ribose; RNA, Catalytic; Spectrometry, Fluorescence; Uridine | 2001 |
Photolithographic synthesis of high-density oligonucleotide arrays.
Topics: 2-Aminopurine; Amides; Combinatorial Chemistry Techniques; Membrane Glycoproteins; Oligonucleotide Array Sequence Analysis; Oligonucleotides; Phosphoric Acids; Photolysis; Purine Nucleosides | 2001 |
Triple-helix formation in the antiparallel binding motif of oligodeoxynucleotides containing N(9)- and N(7)-2-aminopurine deoxynucleosides.
Topics: 2-Aminopurine; Deoxyribonuclease I; DNA Footprinting; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Purine Nucleosides; Spectrophotometry, Ultraviolet; Thermodynamics | 2001 |
A dual role for substrate S-adenosyl-L-methionine in the methylation reaction with bacteriophage T4 Dam DNA-[N6-adenine]-methyltransferase.
Topics: 2-Aminopurine; Bacteriophage T4; Base Sequence; Binding Sites; Cross-Linking Reagents; DNA; DNA Methylation; Fluorescence; Glutaral; Kinetics; Nucleic Acid Conformation; Oligonucleotides; Protein Binding; S-Adenosylhomocysteine; S-Adenosylmethionine; Site-Specific DNA-Methyltransferase (Adenine-Specific); Spectrometry, Fluorescence; Substrate Specificity; Time Factors; Viral Proteins | 2001 |
Diaminopurine-acridine heterodimers for specific recognition of abasic site containing DNA. Influence on the biological activity of the position of the linker on the purine ring.
Topics: 2-Aminopurine; Acridines; Animals; Base Sequence; Carmustine; Cell Line; Dimerization; DNA Damage; Inhibitory Concentration 50; Intercalating Agents; Nucleic Acid Denaturation; Oligonucleotides; Purines; Thermodynamics | 2001 |
A kinetic analysis of substrate recognition by uracil-DNA glycosylase from herpes simplex virus type 1.
Topics: 2-Aminopurine; Amino Acid Substitution; Base Sequence; DNA Glycosylases; Fluorescence; Herpesvirus 1, Human; Kinetics; Mutation; N-Glycosyl Hydrolases; Oligonucleotides; Protein Binding; Substrate Specificity; Uracil; Uracil-DNA Glycosidase | 2001 |
Direct measurement of single-stranded DNA translocation by PcrA helicase using the fluorescent base analogue 2-aminopurine.
Topics: 2-Aminopurine; Adenosine Triphosphate; Bacterial Proteins; DNA Helicases; DNA, Single-Stranded; Geobacillus stearothermophilus; Kinetics; Models, Biological; Oligonucleotides; Protein Binding; Protein Transport; Spectrometry, Fluorescence; Time Factors | 2002 |
2,6-diaminopurine in TNA: effect on duplex stabilities and on the efficiency of template-controlled ligations.
Topics: 2-Aminopurine; Base Pairing; Chromatography, High Pressure Liquid; Crystallography, X-Ray; DNA; Furans; Ligands; Mass Spectrometry; Oligonucleotides; RNA; Spectrophotometry, Ultraviolet; Templates, Genetic | 2002 |
Role of DNA flexibility in sequence-dependent activity of uracil DNA glycosylase.
Topics: 2-Aminopurine; Bacterial Proteins; Base Sequence; DNA; DNA Glycosylases; Enzyme Activation; Escherichia coli; Fluorescent Dyes; Kinetics; N-Glycosyl Hydrolases; Nucleic Acid Conformation; Oligonucleotides; Spectrometry, Fluorescence; Spectrophotometry; Thermodynamics; Uracil; Uracil-DNA Glycosidase | 2002 |
Role of a heterogeneous free state in the formation of a specific RNA-theophylline complex.
Topics: 2-Aminopurine; Binding Sites; Cations, Divalent; Computer Simulation; Kinetics; Ligands; Macromolecular Substances; Magnesium; Models, Chemical; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; RNA; RNA Stability; Software; Spectrometry, Fluorescence; Theophylline | 2003 |
Steady-state and time-resolved fluorescence studies indicate an unusual conformation of 2-aminopurine within ATAT and TATA duplex DNA sequences.
Topics: 2-Aminopurine; Base Pairing; Base Sequence; DNA; Nucleic Acid Conformation; Oligonucleotides; Spectrometry, Fluorescence; Thermodynamics | 2003 |
Binding specificities of the mismatch binding protein, MutS, to oligonucleotides containing modified bases.
Topics: 2-Aminopurine; Adenosine Triphosphatases; Bacterial Proteins; Base Pair Mismatch; Base Sequence; Cytidine; Deoxyribonucleosides; DNA-Binding Proteins; Escherichia coli Proteins; MutS DNA Mismatch-Binding Protein; Nucleic Acid Heteroduplexes; Oligonucleotides | 2001 |
The essential C family DnaE polymerase is error-prone and efficient at lesion bypass.
Topics: 2-Aminopurine; 8-Hydroxy-2'-Deoxyguanosine; Base Pair Mismatch; Base Sequence; Deoxyguanosine; DNA; DNA Polymerase III; DNA Primers; Escherichia coli; Escherichia coli Proteins; Kinetics; Oligonucleotides; Streptococcus pyogenes; Substrate Specificity; Templates, Genetic; Thymine Nucleotides | 2003 |
Low-energy circular dichroism of 2-aminopurine dinucleotide as a probe of local conformation of DNA and RNA.
Topics: 2-Aminopurine; Base Sequence; Circular Dichroism; DNA; Nucleic Acid Conformation; Oligonucleotides; RNA; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet; Thermodynamics | 2004 |
LNA guanine and 2,6-diaminopurine. Synthesis, characterization and hybridization properties of LNA 2,6-diaminopurine containing oligonucleotides.
Topics: 2-Aminopurine; Guanine; Magnetic Resonance Spectroscopy; Nucleic Acid Hybridization; Oligonucleotides; Spectrometry, Mass, Electrospray Ionization | 2004 |
Syntheses and base-pairing properties of locked nucleic acid nucleotides containing hypoxanthine, 2,6-diaminopurine, and 2-aminopurine nucleobases.
Topics: 2-Aminopurine; Base Pairing; Hypoxanthine; Nucleic Acid Conformation; Oligonucleotides; Oligonucleotides, Antisense | 2004 |
Monitoring molecular recognition of the ribosomal decoding site.
Topics: 2-Aminopurine; Aminoglycosides; Anti-Bacterial Agents; Crystallization; Crystallography, X-Ray; Gene Targeting; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Ribosomes; RNA, Bacterial; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet | 2004 |
Asymmetric solid-phase synthesis of 6,6-spiroketals.
Topics: 2-Aminopurine; Aminoglycosides; Anti-Bacterial Agents; Crystallization; Crystallography, X-Ray; Gene Targeting; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Pyrans; Ribosomes; RNA, Bacterial; Spectrometry, Fluorescence; Spectrophotometry, Ultraviolet; Spiro Compounds | 2004 |
DNA charge transport: conformationally gated hopping through stacked domains.
Topics: 2-Aminopurine; Base Pairing; Base Sequence; DNA; Guanine; Nucleic Acid Conformation; Oligonucleotides; Photochemistry; Spectrometry, Fluorescence; Static Electricity; Temperature | 2004 |
Combination of nitrogen dioxide radicals with 8-oxo-7,8-dihydroguanine and guanine radicals in DNA: oxidation and nitration end-products.
Topics: 2-Aminopurine; Chromatography, High Pressure Liquid; DNA; Free Radicals; Guanine; Isotope Labeling; Kinetics; Nitrogen Dioxide; Oligonucleotides; Oxidation-Reduction; Oxygen Isotopes; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization | 2005 |
Low energy CD of RNA hairpin unveils a loop conformation required for lambdaN antitermination activity.
Topics: 2-Aminopurine; Bacterial Proteins; Biophysics; Circular Dichroism; DNA-Directed RNA Polymerases; Escherichia coli; Magnetic Resonance Spectroscopy; Microscopy, Fluorescence; Models, Chemical; Nucleic Acid Conformation; Oligonucleotides; Peptides; Protein Conformation; RNA; RNA-Binding Proteins; RNA, Double-Stranded; Temperature | 2005 |
Unrestricted accessibility of short oligonucleotides to RNA.
Topics: 2-Aminopurine; Base Pairing; Guanine; Hypoxanthine; Nucleic Acid Conformation; Nucleic Acid Hybridization; Oligonucleotides; RNA; RNA Probes; Temperature; Thiouracil | 2005 |
T7 RNA polymerase-induced bending of promoter DNA is coupled to DNA opening.
Topics: 2-Aminopurine; DNA; DNA-Directed RNA Polymerases; Fluorescence Polarization; Fluorescence Resonance Energy Transfer; Fluorescent Dyes; Guanosine Triphosphate; Nucleic Acid Conformation; Oligonucleotides; Promoter Regions, Genetic; Thermodynamics; Viral Proteins | 2006 |
Design of LNA probes that improve mismatch discrimination.
Topics: 2-Aminopurine; Base Pair Mismatch; DNA; Fluorescence; Magnesium; Nucleic Acid Denaturation; Nucleic Acid Probes; Oligonucleotides; Oligonucleotides, Antisense; Sodium; Temperature | 2006 |
Nonpolar nucleobase analogs illuminate requirements for site-specific DNA cleavage by vaccinia topoisomerase.
Topics: 2-Aminopurine; Base Sequence; DNA; DNA Topoisomerases, Type I; Guanine; Indoles; Models, Molecular; Molecular Sequence Data; Oligonucleotides; Protein Binding; Recombinant Proteins; Toluene; Tyrosine; Vaccinia virus | 2006 |
Probing dynamics of HIV-1 nucleocapsid protein/target hexanucleotide complexes by 2-aminopurine.
Topics: 2-Aminopurine; Amino Acid Sequence; Fluorescent Dyes; gag Gene Products, Human Immunodeficiency Virus; HIV-1; Models, Molecular; Molecular Sequence Data; Mutation; Oligonucleotides; RNA, Viral; Spectrometry, Fluorescence | 2008 |
2-Aminopurine/cytosine base pair containing oligonucleotides: fluorescence spectroscopy studies on DNA-polyamide binding.
Topics: 2-Aminopurine; Base Pairing; Binding Sites; Cytosine; DNA; Nylons; Oligonucleotides; Spectrometry, Fluorescence | 2008 |
Long-wavelength fluorescence from 2-aminopurine-nucleobase dimers in DNA.
Topics: 2-Aminopurine; Base Sequence; Dimerization; DNA; Fluorescence; Models, Molecular; Nucleic Acid Conformation; Oligonucleotides; Solutions; Spectrometry, Fluorescence; Temperature | 2008 |
Synthesis of the new nucleoside analogue connecting 2-amino-6-vinylpurine to the 2'-deoxyribose skeleton via the methylene linker.
Topics: 2-Aminopurine; Cross-Linking Reagents; Deoxyribose; Oligonucleotides; Purine Nucleosides; Purines; Vinyl Compounds | 2008 |
Stability and mismatch discrimination of DNA duplexes containing 2,6-diaminopurine and 2-thiothymidine locked nucleic acid bases.
Topics: 2-Aminopurine; Base Pair Mismatch; Calorimetry, Differential Scanning; DNA; Oligonucleotide Probes; Oligonucleotides; Spectrophotometry, Ultraviolet; Thermodynamics; Thymidine | 2008 |
Back-electron transfer suppresses the periodic length dependence of DNA-mediated charge transport across adenine tracts.
Topics: 2-Aminopurine; Adenine; Anthraquinones; Base Sequence; DNA; Electrons; Models, Molecular; Oligonucleotides; Oxidation-Reduction; Quantum Theory; Rhodium | 2008 |
RecA-mediated strand invasion of DNA by oligonucleotides substituted with 2-aminoadenine and 2-thiothymine.
Topics: 2-Aminopurine; Adenosine Triphosphate; Base Pair Mismatch; Base Pairing; DNA; Models, Genetic; Nucleic Acid Hybridization; Oligodeoxyribonucleotides; Oligonucleotides; Peptide Nucleic Acids; Rec A Recombinases; Recombination, Genetic; Thymine | 2008 |
Site-specific characterization of HIV-1 nucleocapsid protein binding to oligonucleotides with two binding sites.
Topics: 2-Aminopurine; Amino Acid Motifs; Amino Acid Sequence; Binding Sites; gag Gene Products, Human Immunodeficiency Virus; HIV-1; Kinetics; Molecular Sequence Data; Oligonucleotides; Protein Binding | 2009 |
Context dependence of trinucleotide repeat structures.
Topics: 2-Aminopurine; Acrylamide; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Spectrometry, Fluorescence; Transition Temperature; Trinucleotide Repeat Expansion; Trinucleotide Repeats | 2010 |
Studies on the site and mode of TMPyP4 interactions with Bcl-2 promoter sequence G-Quadruplexes.
Topics: 2-Aminopurine; Absorption; Base Sequence; Calorimetry; Calorimetry, Differential Scanning; Circular Dichroism; Fluorescence; G-Quadruplexes; Mutation, Missense; Nonlinear Dynamics; Nucleic Acid Conformation; Oligonucleotides; Porphyrins; Promoter Regions, Genetic; Proto-Oncogene Proteins c-bcl-2; Regression Analysis; Spectrum Analysis; Temperature; Thermodynamics; Ultraviolet Rays | 2010 |
Comparisons between chemical mapping and binding to isoenergetic oligonucleotide microarrays reveal unexpected patterns of binding to the Bacillus subtilis RNase P RNA specificity domain.
Topics: 2-Aminopurine; Bacillus subtilis; Binding Sites; Oligonucleotide Array Sequence Analysis; Oligonucleotide Probes; Oligonucleotides; Ribonuclease P; RNA; Sensitivity and Specificity | 2010 |
2-Aminopurine incorporation perturbs the dynamics and structure of DNA.
Topics: 2-Aminopurine; Base Pairing; Base Sequence; Isomerism; Magnetic Resonance Spectroscopy; Nucleic Acid Conformation; Oligonucleotides; Spectrophotometry, Ultraviolet; Transition Temperature | 2010 |
Sequence length dictates repeated CAG folding in three-way junctions.
Topics: 2-Aminopurine; Base Pairing; DNA Repeat Expansion; DNA Replication; Humans; Molecular Sequence Data; Nucleic Acid Conformation; Nucleic Acid Heteroduplexes; Oligonucleotides; Repetitive Sequences, Nucleic Acid; Sequence Analysis, DNA; Thermodynamics; Trinucleotide Repeats | 2011 |
Fluorescence properties of 8-(2-pyridyl)guanine "2PyG" as compared to 2-aminopurine in DNA.
Topics: 2-Aminopurine; Circular Dichroism; DNA; Fluorescence; G-Quadruplexes; Guanine; Guanosine Monophosphate; Humans; Nucleic Acid Conformation; Nucleosides; Oligonucleotides; Quantum Theory; Thermodynamics | 2011 |
Ultrafast site-specific fluorescence quenching of 2-aminopurine in a DNA hairpin studied by femtosecond down-conversion.
Topics: 2-Aminopurine; DNA, Viral; Fluorescence; Guanine; HIV-1; Humans; Inverted Repeat Sequences; Kinetics; Nucleic Acid Conformation; Oligonucleotides; Signal-To-Noise Ratio; Solutions; Spectrometry, Fluorescence; Thermodynamics; Time Factors | 2012 |
Populated intermediates in the thermal unfolding of the human telomeric quadruplex.
Topics: 2-Aminopurine; Base Sequence; Circular Dichroism; Fluorescence Resonance Energy Transfer; Humans; Models, Molecular; Nucleic Acid Conformation; Nucleic Acid Denaturation; Oligonucleotides; Telomere; Temperature | 2012 |
Fluorescent properties of oligonucleotides doubly modified with an indole-fused cytosine analog and 2-aminopurine.
Topics: 2-Aminopurine; Base Sequence; Cytosine; Fluorescent Dyes; Indoles; Molecular Imaging; Molecular Sequence Data; Oligonucleotides; Spectrometry, Fluorescence; Staining and Labeling | 2013 |
Formation of the N(2)-acetyl-2,6-diaminopurine oligonucleotide impurity caused by acetyl capping.
Topics: 2-Aminopurine; Molecular Structure; Oligonucleotides | 2014 |
Monitoring translocation of multisubunit RNA polymerase along the DNA with fluorescent base analogues.
Topics: 2-Aminopurine; Adenine; DNA; DNA-Directed RNA Polymerases; Escherichia coli; Fluorescence; Guanine; Molecular Biology; Molecular Structure; Oligonucleotides; Spectrometry, Fluorescence; Transcription, Genetic; Xanthopterin | 2015 |
Cooperative base pair melting by helicase and polymerase positioned one nucleotide from each other.
Topics: 2-Aminopurine; DNA Helicases; DNA Primase; DNA Replication; DNA-Directed DNA Polymerase; Escherichia coli; Fluorescence; Kinetics; Models, Biological; Nucleic Acid Denaturation; Oligonucleotides | 2015 |
Merging Two Strategies for Mixed-Sequence Recognition of Double-Stranded DNA: Pseudocomplementary Invader Probes.
Topics: 2-Aminopurine; Base Pairing; DNA; Molecular Biology; Nucleic Acids; Oligonucleotides; Peptide Nucleic Acids; Thermodynamics; Thymine | 2016 |
A DFT study of 2-aminopurine-containing dinucleotides: prediction of stacked conformations with B-DNA structure.
Topics: 2-Aminopurine; Dinucleoside Phosphates; DNA, B-Form; Molecular Dynamics Simulation; Nucleic Acid Conformation; Oligonucleotides; Thermodynamics | 2016 |
A highly specific sodium aptamer probed by 2-aminopurine for robust Na+ sensing.
Topics: 2-Aminopurine; Aptamers, Nucleotide; Base Pairing; Biosensing Techniques; DNA, Catalytic; Mutation; Nucleic Acid Conformation; Oligonucleotides; Reproducibility of Results; Sensitivity and Specificity; Sodium; Spectrometry, Fluorescence | 2016 |
Two Completely Different Mechanisms for Highly Specific Na
Topics: 2-Aminopurine; Base Sequence; Biocatalysis; DNA, Catalytic; Ions; Nucleic Acid Conformation; Oligonucleotides; Phosphates; Sodium; Spectrometry, Fluorescence | 2017 |
Introduction of 2,6-Diaminopurines into Serinol Nucleic Acid Improves Anti-miRNA Performance.
Topics: 2-Aminopurine; HeLa Cells; Humans; MicroRNAs; Nucleic Acids; Oligonucleotides; Propanolamines; Propylene Glycols | 2017 |
Evidence of a General Acid-Base Catalysis Mechanism in the 8-17 DNAzyme.
Topics: 2-Aminopurine; Base Sequence; Catalytic Domain; DNA, Catalytic; Hydrogen-Ion Concentration; Inosine; Kinetics; Oligonucleotides; RNA; Structure-Activity Relationship | 2018 |
Chemical-induced formation of BZ-junction with base extrusion.
Topics: 2-Aminopurine; Cold Temperature; DNA, B-Form; DNA, Z-Form; Hot Temperature; Nucleic Acid Conformation; Oligonucleotides | 2019 |
Nucleobase derivatives induce in-source decay of oligonucleotides as new matrix-assisted laser desorption/ionization matrices.
Topics: 2-Aminopurine; DNA; Oligonucleotides; RNA; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization; Thioguanine | 2020 |
Incorporation of Pseudo-complementary Bases 2,6-Diaminopurine and 2-Thiouracil into Serinol Nucleic Acid (SNA) to Promote SNA/RNA Hybridization.
Topics: 2-Aminopurine; Base Pairing; Hydrogen Bonding; Nucleic Acid Hybridization; Oligonucleotides; Phase Transition; Propanolamines; Propylene Glycols; RNA; Thiouracil; Transition Temperature | 2020 |
Dual miRNases for Triple Incision of miRNA Target: Design Concept and Catalytic Performance.
Topics: 2-Aminopurine; Base Sequence; Biocatalysis; Catalytic Domain; Humans; Hydrogen-Ion Concentration; MicroRNAs; Oligonucleotides; Peptides; Ribonucleases; RNA Stability | 2020 |
A Chemical Approach to Introduce 2,6-Diaminopurine and 2-Aminoadenine Conjugates into Oligonucleotides without Need for Protecting Groups.
Topics: 2-Aminopurine; Adenine; Oligonucleotides | 2022 |