2--deoxyguanosine-5--phosphate and 4-ethylphenol

We describe an ultraviolet resonance Raman (UVRR) spectrometer appropriate for structural studies of biological macromolecules and their assemblies. Instrument design includes the following features: a continuous wave, intracavity doubled, ultraviolet laser source for excitation of the Raman spectrum; a rotating cell (or jet source) for presentation of the sample to the laser beam; a Cassegrain optic with f/1.0 aperture for collection of the Raman scattering; a quartz prism dispersing element for rejection of stray light and Rayleigh scattering; a 0.75-m single grating monochromator for dispersion of the Raman scattering; and a liquid-nitrogen-cooled, charge-coupled device for detection of the Raman photons. The performance of this instrument, assessed on the basis of the observed signal-to-noise ratios, the apparent resolution of closely spaced spectral bands, and the wide spectrometer bandpass of 2200 cm-1, is believed superior to previously described UVRR spectrometers of similar design. Performance characteristics of the instrument are demonstrated in UVRR spectra obtained from standard solvents, p-ethylphenol, which serves as a model for the tyrosine side chain, the DNA nucleotide deoxyguanosine-5'-monophosphate, and the human tumor necrosis factor binding protein, which is considered representative of soluble globular proteins.

Topics: Acetonitriles; Biophysical Phenomena; Biophysics; Carbon Tetrachloride; Carrier Proteins; Deoxyguanine Nucleotides; Evaluation Studies as Topic; Humans; Macromolecular Substances; Models, Chemical; Molecular Structure; Nucleic Acids; Phenols; Photochemistry; Proteins; Receptors, Tumor Necrosis Factor; Receptors, Tumor Necrosis Factor, Type I; Spectrophotometry, Ultraviolet; Spectrum Analysis, Raman; Tumor Necrosis Factor Decoy Receptors; Tyrosine; Ultraviolet Rays