Page last updated: 2024-11-13

pf-06687252

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Description

PF-06687252: a SMARCA2/4 bromodomain inhibitor; structure in first source [Medical Subject Headings (MeSH), National Library of Medicine, extracted Dec-2023]

PFI-3 : An azabicycloalkane that is (1R,4R)-2,5-diazabicyclo[2.2.1]heptane which is substituted at position 2 by a 3-(2-hydroxyphenyl)-3-oxoprop-1-en-1-yl group and at position 5 by a pyridin-2-yl group. It is a potent and selective inhibitor of polybromo 1 (Kd = 48 nM), SMARCA2 and SMARCA4 (Kd = 89 nM) bromodomains. [Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Cross-References

ID SourceID
PubMed CID78243717
CHEMBL ID3752911
CHEBI ID149519
SCHEMBL ID19730380
MeSH IDM000612904

Synonyms (36)

Synonym
1819363-80-8
(e)-1-(2-hydroxyphenyl)-3-((1r,4r)-5-(pyridin-2-yl)-2,5-diazabicyclo[2.2.1]heptan-2-yl)prop-2-en-1-one
pfi 3
(2e)-1-(2-hydroxyphenyl)-3-[(1r,4r)-5-(2-pyridinyl)-2,5-diazabicyclo[2.2.1]hept-2-yl]-2-propen-1-one
pfi-3
(2e)-1-(2-hydroxyphenyl)-3-[(1r,4r)-5-(pyridin-2-yl)-2,5-diazabicyclo[2.2.1]heptan-2-yl]prop-2-en-1-one
pfi3
CHEBI:149519
pf-6687252
S7315
(e)-1-(2-hydroxyphenyl)-3-[(1r,4r)-2-pyridin-2-yl-2,5-diazabicyclo[2.2.1]heptan-5-yl]prop-2-en-1-one
gtpl7915
pf-06687252
compound 16 [pmid: 27115555]
in2080
CS-3455
HY-12409
AKOS024458481
J-690249
CHEMBL3752911 ,
EX-A520
2-propen-1-one, 1-(2-hydroxyphenyl)-3-[(1r,4r)-5-(2-pyridinyl)-2,5-diazabicyclo[2.2.1]hept-2-yl]-, (2e)-
pfi-3, >=98% (hplc)
mfcd28100807
bdbm50158688
SCHEMBL19730380
BS-15703
Q27088339
BCP10158
lm-3110
CCG-267721
AC-35944
nsc-783642
nsc783642
BP-25372
(e)-1-(2-hydroxyphenyl)-3-[(1r,4r)-5-pyridin-2-yl-2,5-diazabicyclo[2.2.1]heptan-2-yl]prop-2-en-1-one
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Drug Classes (4)

ClassDescription
pyridinesAny organonitrogen heterocyclic compound based on a pyridine skeleton and its substituted derivatives.
azabicycloalkane
phenolsOrganic aromatic compounds having one or more hydroxy groups attached to a benzene or other arene ring.
enoneAn alpha,beta-unsaturated ketone of general formula R(1)R(2)C=CR(3)-C(=O)R(4) (R(4) =/= H) in which the C=O function is conjugated to a C=C double bond at the alpha,beta position.
[compound class information is derived from Chemical Entities of Biological Interest (ChEBI), Hastings J, Owen G, Dekker A, Ennis M, Kale N, Muthukrishnan V, Turner S, Swainston N, Mendes P, Steinbeck C. (2016). ChEBI in 2016: Improved services and an expanding collection of metabolites. Nucleic Acids Res]

Protein Targets (4)

Inhibition Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Bromodomain-containing protein 4Homo sapiens (human)IC50 (µMol)100.00000.00040.40329.0500AID1886338
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Activation Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Probable global transcription activator SNF2L2Homo sapiens (human)EC50 (µMol)1.00001.00001.00001.0000AID1912987
Probable global transcription activator SNF2L2Homo sapiens (human)Kd0.05350.01800.05350.0890AID1886341; AID1913282
Transcription activator BRG1Homo sapiens (human)EC50 (µMol)1.00001.00001.00001.0000AID1912988
Transcription activator BRG1Homo sapiens (human)Kd0.07480.02100.07480.1000AID1289200; AID1308371; AID1310278; AID1886340
Protein polybromo-1Homo sapiens (human)EC50 (µMol)1.00001.00001.00001.0000AID1912986
Protein polybromo-1Homo sapiens (human)Kd1.01150.02501.01155.8000AID1289201; AID1308370; AID1310276; AID1886342; AID1886343; AID1913281
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Biological Processes (43)

Processvia Protein(s)Taxonomy
regulation of transcription by RNA polymerase IIBromodomain-containing protein 4Homo sapiens (human)
positive regulation of G2/M transition of mitotic cell cycleBromodomain-containing protein 4Homo sapiens (human)
positive regulation of transcription elongation by RNA polymerase IIBromodomain-containing protein 4Homo sapiens (human)
chromatin organizationBromodomain-containing protein 4Homo sapiens (human)
DNA damage responseBromodomain-containing protein 4Homo sapiens (human)
positive regulation of transcription elongation by RNA polymerase IIBromodomain-containing protein 4Homo sapiens (human)
positive regulation of canonical NF-kappaB signal transductionBromodomain-containing protein 4Homo sapiens (human)
positive regulation of DNA-templated transcriptionBromodomain-containing protein 4Homo sapiens (human)
positive regulation of transcription by RNA polymerase IIBromodomain-containing protein 4Homo sapiens (human)
regulation of inflammatory responseBromodomain-containing protein 4Homo sapiens (human)
positive regulation of T-helper 17 cell lineage commitmentBromodomain-containing protein 4Homo sapiens (human)
negative regulation of transcription by RNA polymerase IIProbable global transcription activator SNF2L2Homo sapiens (human)
chromatin remodelingProbable global transcription activator SNF2L2Homo sapiens (human)
regulation of DNA-templated transcriptionProbable global transcription activator SNF2L2Homo sapiens (human)
regulation of transcription by RNA polymerase IIProbable global transcription activator SNF2L2Homo sapiens (human)
spermatid developmentProbable global transcription activator SNF2L2Homo sapiens (human)
nervous system developmentProbable global transcription activator SNF2L2Homo sapiens (human)
positive regulation of cell population proliferationProbable global transcription activator SNF2L2Homo sapiens (human)
negative regulation of cell population proliferationProbable global transcription activator SNF2L2Homo sapiens (human)
regulation of mitotic metaphase/anaphase transitionProbable global transcription activator SNF2L2Homo sapiens (human)
negative regulation of cell growthProbable global transcription activator SNF2L2Homo sapiens (human)
positive regulation of T cell differentiationProbable global transcription activator SNF2L2Homo sapiens (human)
negative regulation of cell differentiationProbable global transcription activator SNF2L2Homo sapiens (human)
positive regulation of cell differentiationProbable global transcription activator SNF2L2Homo sapiens (human)
positive regulation of myoblast differentiationProbable global transcription activator SNF2L2Homo sapiens (human)
negative regulation of DNA-templated transcriptionProbable global transcription activator SNF2L2Homo sapiens (human)
positive regulation of DNA-templated transcriptionProbable global transcription activator SNF2L2Homo sapiens (human)
positive regulation of transcription by RNA polymerase IIProbable global transcription activator SNF2L2Homo sapiens (human)
regulation of G0 to G1 transitionProbable global transcription activator SNF2L2Homo sapiens (human)
positive regulation of stem cell population maintenanceProbable global transcription activator SNF2L2Homo sapiens (human)
regulation of G1/S transition of mitotic cell cycleProbable global transcription activator SNF2L2Homo sapiens (human)
positive regulation of double-strand break repairProbable global transcription activator SNF2L2Homo sapiens (human)
regulation of nucleotide-excision repairProbable global transcription activator SNF2L2Homo sapiens (human)
negative regulation of transcription by RNA polymerase IITranscription activator BRG1Homo sapiens (human)
RNA polymerase I preinitiation complex assemblyTranscription activator BRG1Homo sapiens (human)
neural retina developmentTranscription activator BRG1Homo sapiens (human)
nucleosome disassemblyTranscription activator BRG1Homo sapiens (human)
chromatin remodelingTranscription activator BRG1Homo sapiens (human)
regulation of transcription by RNA polymerase IITranscription activator BRG1Homo sapiens (human)
nervous system developmentTranscription activator BRG1Homo sapiens (human)
positive regulation of cell population proliferationTranscription activator BRG1Homo sapiens (human)
regulation of mitotic metaphase/anaphase transitionTranscription activator BRG1Homo sapiens (human)
positive regulation of Wnt signaling pathwayTranscription activator BRG1Homo sapiens (human)
negative regulation of cell growthTranscription activator BRG1Homo sapiens (human)
positive regulation by host of viral transcriptionTranscription activator BRG1Homo sapiens (human)
positive regulation of T cell differentiationTranscription activator BRG1Homo sapiens (human)
negative regulation of cell differentiationTranscription activator BRG1Homo sapiens (human)
positive regulation of cell differentiationTranscription activator BRG1Homo sapiens (human)
positive regulation of myoblast differentiationTranscription activator BRG1Homo sapiens (human)
transcription initiation-coupled chromatin remodelingTranscription activator BRG1Homo sapiens (human)
negative regulation of DNA-templated transcriptionTranscription activator BRG1Homo sapiens (human)
positive regulation of DNA-templated transcriptionTranscription activator BRG1Homo sapiens (human)
positive regulation of transcription by RNA polymerase IITranscription activator BRG1Homo sapiens (human)
positive regulation of DNA-binding transcription factor activityTranscription activator BRG1Homo sapiens (human)
negative regulation of androgen receptor signaling pathwayTranscription activator BRG1Homo sapiens (human)
regulation of G0 to G1 transitionTranscription activator BRG1Homo sapiens (human)
positive regulation of cold-induced thermogenesisTranscription activator BRG1Homo sapiens (human)
positive regulation of transcription of nucleolar large rRNA by RNA polymerase ITranscription activator BRG1Homo sapiens (human)
positive regulation of stem cell population maintenanceTranscription activator BRG1Homo sapiens (human)
positive regulation of glucose mediated signaling pathwayTranscription activator BRG1Homo sapiens (human)
positive regulation of miRNA transcriptionTranscription activator BRG1Homo sapiens (human)
regulation of G1/S transition of mitotic cell cycleTranscription activator BRG1Homo sapiens (human)
positive regulation of double-strand break repairTranscription activator BRG1Homo sapiens (human)
regulation of nucleotide-excision repairTranscription activator BRG1Homo sapiens (human)
mitotic cell cycleProtein polybromo-1Homo sapiens (human)
chromatin remodelingProtein polybromo-1Homo sapiens (human)
regulation of transcription by RNA polymerase IIProtein polybromo-1Homo sapiens (human)
negative regulation of cell population proliferationProtein polybromo-1Homo sapiens (human)
regulation of mitotic metaphase/anaphase transitionProtein polybromo-1Homo sapiens (human)
positive regulation of T cell differentiationProtein polybromo-1Homo sapiens (human)
positive regulation of cell differentiationProtein polybromo-1Homo sapiens (human)
positive regulation of myoblast differentiationProtein polybromo-1Homo sapiens (human)
regulation of G0 to G1 transitionProtein polybromo-1Homo sapiens (human)
regulation of G1/S transition of mitotic cell cycleProtein polybromo-1Homo sapiens (human)
positive regulation of double-strand break repairProtein polybromo-1Homo sapiens (human)
regulation of nucleotide-excision repairProtein polybromo-1Homo sapiens (human)
transcription elongation by RNA polymerase IIProtein polybromo-1Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Molecular Functions (28)

Processvia Protein(s)Taxonomy
transcription cis-regulatory region bindingBromodomain-containing protein 4Homo sapiens (human)
p53 bindingBromodomain-containing protein 4Homo sapiens (human)
chromatin bindingBromodomain-containing protein 4Homo sapiens (human)
transcription coregulator activityBromodomain-containing protein 4Homo sapiens (human)
transcription coactivator activityBromodomain-containing protein 4Homo sapiens (human)
protein bindingBromodomain-containing protein 4Homo sapiens (human)
RNA polymerase II CTD heptapeptide repeat kinase activityBromodomain-containing protein 4Homo sapiens (human)
enzyme bindingBromodomain-containing protein 4Homo sapiens (human)
lysine-acetylated histone bindingBromodomain-containing protein 4Homo sapiens (human)
RNA polymerase II C-terminal domain bindingBromodomain-containing protein 4Homo sapiens (human)
P-TEFb complex bindingBromodomain-containing protein 4Homo sapiens (human)
histone reader activityBromodomain-containing protein 4Homo sapiens (human)
transcription cis-regulatory region bindingProbable global transcription activator SNF2L2Homo sapiens (human)
chromatin bindingProbable global transcription activator SNF2L2Homo sapiens (human)
transcription coactivator activityProbable global transcription activator SNF2L2Homo sapiens (human)
helicase activityProbable global transcription activator SNF2L2Homo sapiens (human)
protein bindingProbable global transcription activator SNF2L2Homo sapiens (human)
ATP bindingProbable global transcription activator SNF2L2Homo sapiens (human)
ATP-dependent activity, acting on DNAProbable global transcription activator SNF2L2Homo sapiens (human)
hydrolase activityProbable global transcription activator SNF2L2Homo sapiens (human)
histone bindingProbable global transcription activator SNF2L2Homo sapiens (human)
ATP-dependent chromatin remodeler activityProbable global transcription activator SNF2L2Homo sapiens (human)
DNA bindingProbable global transcription activator SNF2L2Homo sapiens (human)
RNA polymerase I core promoter sequence-specific DNA bindingTranscription activator BRG1Homo sapiens (human)
nucleosomal DNA bindingTranscription activator BRG1Homo sapiens (human)
transcription coregulator bindingTranscription activator BRG1Homo sapiens (human)
p53 bindingTranscription activator BRG1Homo sapiens (human)
transcription coactivator activityTranscription activator BRG1Homo sapiens (human)
transcription corepressor activityTranscription activator BRG1Homo sapiens (human)
RNA bindingTranscription activator BRG1Homo sapiens (human)
helicase activityTranscription activator BRG1Homo sapiens (human)
protein bindingTranscription activator BRG1Homo sapiens (human)
ATP bindingTranscription activator BRG1Homo sapiens (human)
ATP-dependent activity, acting on DNATranscription activator BRG1Homo sapiens (human)
hydrolase activityTranscription activator BRG1Homo sapiens (human)
Tat protein bindingTranscription activator BRG1Homo sapiens (human)
nuclear androgen receptor bindingTranscription activator BRG1Homo sapiens (human)
DNA polymerase bindingTranscription activator BRG1Homo sapiens (human)
lysine-acetylated histone bindingTranscription activator BRG1Homo sapiens (human)
ATP-dependent chromatin remodeler activityTranscription activator BRG1Homo sapiens (human)
DNA bindingTranscription activator BRG1Homo sapiens (human)
transcription factor bindingTranscription activator BRG1Homo sapiens (human)
DNA bindingProtein polybromo-1Homo sapiens (human)
chromatin bindingProtein polybromo-1Homo sapiens (human)
protein bindingProtein polybromo-1Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Ceullar Components (21)

Processvia Protein(s)Taxonomy
condensed nuclear chromosomeBromodomain-containing protein 4Homo sapiens (human)
nucleusBromodomain-containing protein 4Homo sapiens (human)
nucleoplasmBromodomain-containing protein 4Homo sapiens (human)
chromatinProbable global transcription activator SNF2L2Homo sapiens (human)
nucleusProbable global transcription activator SNF2L2Homo sapiens (human)
nucleoplasmProbable global transcription activator SNF2L2Homo sapiens (human)
brahma complexProbable global transcription activator SNF2L2Homo sapiens (human)
intracellular membrane-bounded organelleProbable global transcription activator SNF2L2Homo sapiens (human)
intermediate filament cytoskeletonProbable global transcription activator SNF2L2Homo sapiens (human)
npBAF complexProbable global transcription activator SNF2L2Homo sapiens (human)
nBAF complexProbable global transcription activator SNF2L2Homo sapiens (human)
bBAF complexProbable global transcription activator SNF2L2Homo sapiens (human)
GBAF complexProbable global transcription activator SNF2L2Homo sapiens (human)
SWI/SNF complexProbable global transcription activator SNF2L2Homo sapiens (human)
nucleusProbable global transcription activator SNF2L2Homo sapiens (human)
nucleusTranscription activator BRG1Homo sapiens (human)
kinetochoreTranscription activator BRG1Homo sapiens (human)
chromatinTranscription activator BRG1Homo sapiens (human)
fibrillar centerTranscription activator BRG1Homo sapiens (human)
extracellular spaceTranscription activator BRG1Homo sapiens (human)
nucleusTranscription activator BRG1Homo sapiens (human)
nucleoplasmTranscription activator BRG1Homo sapiens (human)
nucleolusTranscription activator BRG1Homo sapiens (human)
membraneTranscription activator BRG1Homo sapiens (human)
nuclear matrixTranscription activator BRG1Homo sapiens (human)
SWI/SNF complexTranscription activator BRG1Homo sapiens (human)
RSC-type complexTranscription activator BRG1Homo sapiens (human)
npBAF complexTranscription activator BRG1Homo sapiens (human)
nBAF complexTranscription activator BRG1Homo sapiens (human)
bBAF complexTranscription activator BRG1Homo sapiens (human)
GBAF complexTranscription activator BRG1Homo sapiens (human)
protein-containing complexTranscription activator BRG1Homo sapiens (human)
nuclear chromosomeProtein polybromo-1Homo sapiens (human)
kinetochoreProtein polybromo-1Homo sapiens (human)
chromatinProtein polybromo-1Homo sapiens (human)
nucleusProtein polybromo-1Homo sapiens (human)
nucleoplasmProtein polybromo-1Homo sapiens (human)
nuclear matrixProtein polybromo-1Homo sapiens (human)
RSC-type complexProtein polybromo-1Homo sapiens (human)
SWI/SNF complexProtein polybromo-1Homo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Bioassays (60)

Assay IDTitleYearJournalArticle
AID1289201Binding affinity to PB1 bromodomain5 (unknown origin) by isothermal titration calorimetric analysis2016Journal of medicinal chemistry, Feb-25, Volume: 59, Issue:4
Disrupting Acetyl-Lysine Recognition: Progress in the Development of Bromodomain Inhibitors.
AID1289204Binding affinity to PB1 bromodomain5 (unknown origin) at 10 uM by DFS analysis2016Journal of medicinal chemistry, Feb-25, Volume: 59, Issue:4
Disrupting Acetyl-Lysine Recognition: Progress in the Development of Bromodomain Inhibitors.
AID1308372Half life in PBS at pH 7.4 at 20 degC2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1886342Binding affinity to human PBRM1 bromodomain 5 (S645 to D766 residues) expressed in bacterial expression system by bromoscan assay2022Journal of medicinal chemistry, 08-25, Volume: 65, Issue:16
GNE-064: A Potent, Selective, and Orally Bioavailable Chemical Probe for the Bromodomains of SMARCA2 and SMARCA4 and the Fifth Bromodomain of PBRM1.
AID1888674Anti-tumor activity against human MT330 cells xenografted in NSG mouse assessed as reduction in tumor growth at 10 mg/kg, ip for alterate days combination with TMZ and measured after 8 weeks2022Bioorganic & medicinal chemistry, 01-01, Volume: 53Novel structural-related analogs of PFI-3 (SRAPs) that target the BRG1 catalytic subunit of the SWI/SNF complex increase the activity of temozolomide in glioblastoma cells.
AID1310276Binding affinity to His6-tagged human recombinant PB1 bromodomain isoform 5 expressed in Escherichia coli BL21(DE3)-R3-pRARE2 cells by VP-ITC microcalorimetry2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification and Development of 2,3-Dihydropyrrolo[1,2-a]quinazolin-5(1H)-one Inhibitors Targeting Bromodomains within the Switch/Sucrose Nonfermenting Complex.
AID1308388Drug recovery in cell media after 1 week at 37 degC by HPLC analysis2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1683141Binding affinity to polybromo-1 (1) (unknown origin) assessed as change in melting temperature at 20 uM by SYPRO orange dye based DSF assay2020Journal of medicinal chemistry, 12-10, Volume: 63, Issue:23
Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
AID1308370Binding affinity to human PB1 isoform 5 expressed in BL21 (DE3)-R3-BirA cells by isothermal titration calorimetry2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1888670Antiproliferative activity against human LN-229 cells assessed as reduction in cell viability at 2 uM up to 7 days by incucyte live cell assay2022Bioorganic & medicinal chemistry, 01-01, Volume: 53Novel structural-related analogs of PFI-3 (SRAPs) that target the BRG1 catalytic subunit of the SWI/SNF complex increase the activity of temozolomide in glioblastoma cells.
AID1886340Binding affinity to human SMARCA4 (A1448 to S1575 residues) expressed in bacterial expression system by bromoscan assay2022Journal of medicinal chemistry, 08-25, Volume: 65, Issue:16
GNE-064: A Potent, Selective, and Orally Bioavailable Chemical Probe for the Bromodomains of SMARCA2 and SMARCA4 and the Fifth Bromodomain of PBRM1.
AID1308364Binding affinity to human PB1 isoform 4 expressed in BL21 (DE3)-R3-BirA cells assessed as change in melting temperature at 10 uM by sypro-orange dye-based differential scanning fluorimetric analysis2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1289200Binding affinity to SMARCA4 (unknown origin) by isothermal titration calorimetric analysis2016Journal of medicinal chemistry, Feb-25, Volume: 59, Issue:4
Disrupting Acetyl-Lysine Recognition: Progress in the Development of Bromodomain Inhibitors.
AID1886338Inhibition of BRD4 bromodomain 1 (unknown origin) by TR-FRET assay2022Journal of medicinal chemistry, 08-25, Volume: 65, Issue:16
GNE-064: A Potent, Selective, and Orally Bioavailable Chemical Probe for the Bromodomains of SMARCA2 and SMARCA4 and the Fifth Bromodomain of PBRM1.
AID1888672Binding affinity to epitope-tagged BRG1 bromodomain (unknown origin) expressed in MT330 cells assessed as thermostability at < 54.2 degC at 30 uM for 2 hrs by CESTA2022Bioorganic & medicinal chemistry, 01-01, Volume: 53Novel structural-related analogs of PFI-3 (SRAPs) that target the BRG1 catalytic subunit of the SWI/SNF complex increase the activity of temozolomide in glioblastoma cells.
AID1308380Cytotoxicity against mouse C2C12 cells assessed as cell death at 100 uM after 72 hrs by MTT assay2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1310275Binding affinity to His6-tagged human recombinant PB1 bromodomain isoform 5 expressed in Escherichia coli BL21(DE3)-R3-pRARE2 cells assessed as change in melting temperature at 10 uM by SyproOrange dye based DSF thermal shift assay2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification and Development of 2,3-Dihydropyrrolo[1,2-a]quinazolin-5(1H)-one Inhibitors Targeting Bromodomains within the Switch/Sucrose Nonfermenting Complex.
AID1888673Anti-tumor activity against human MT330 cells xenografted in NSG mouse assessed as reduction in tumor growth at 10 mg/kg, ip for alterate days combination with TMZ and measured after 2 weeks2022Bioorganic & medicinal chemistry, 01-01, Volume: 53Novel structural-related analogs of PFI-3 (SRAPs) that target the BRG1 catalytic subunit of the SWI/SNF complex increase the activity of temozolomide in glioblastoma cells.
AID1308367Binding affinity to human SMARC2B expressed in BL21 (DE3)-R3-BirA cells assessed as change in melting temperature at 10 uM by sypro-orange dye-based differential scanning fluorimetric analysis2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1683118Inhibition of IBMX/insulin/dexamethasone/rosiglitazone-induced adipocyte differentiation in mouse 3T3-L1 cells assessed as effect on lipid droplet accumulation at 5 uM incubated for 14 days by oil red O staining2020Journal of medicinal chemistry, 12-10, Volume: 63, Issue:23
Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
AID1289202Binding affinity to SMARCA2 (unknown origin) at 10 uM by DFS analysis2016Journal of medicinal chemistry, Feb-25, Volume: 59, Issue:4
Disrupting Acetyl-Lysine Recognition: Progress in the Development of Bromodomain Inhibitors.
AID1888671Antiproliferative activity against human LN-229 cells assessed as reduction in cell viability at 2 uM combination with TMZ up to 7 days by incucyte live cell assay2022Bioorganic & medicinal chemistry, 01-01, Volume: 53Novel structural-related analogs of PFI-3 (SRAPs) that target the BRG1 catalytic subunit of the SWI/SNF complex increase the activity of temozolomide in glioblastoma cells.
AID1886343Binding affinity to human PBRM1 bromodomain 2 (S178 to E291 residues) expressed in bacterial expression system by bromoscan assay2022Journal of medicinal chemistry, 08-25, Volume: 65, Issue:16
GNE-064: A Potent, Selective, and Orally Bioavailable Chemical Probe for the Bromodomains of SMARCA2 and SMARCA4 and the Fifth Bromodomain of PBRM1.
AID1308365Binding affinity to human PB1 isoform 5 expressed in BL21 (DE3)-R3-BirA cells assessed as change in melting temperature at 10 uM by sypro-orange dye-based differential scanning fluorimetric analysis2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1886341Binding affinity to human SMARCA2 (S1337 to Q1486 residues) expressed in bacterial expression system by bromoscan assay2022Journal of medicinal chemistry, 08-25, Volume: 65, Issue:16
GNE-064: A Potent, Selective, and Orally Bioavailable Chemical Probe for the Bromodomains of SMARCA2 and SMARCA4 and the Fifth Bromodomain of PBRM1.
AID1886336Inhibition of SMARCA2 (unknown origin) by TR-FRET assay2022Journal of medicinal chemistry, 08-25, Volume: 65, Issue:16
GNE-064: A Potent, Selective, and Orally Bioavailable Chemical Probe for the Bromodomains of SMARCA2 and SMARCA4 and the Fifth Bromodomain of PBRM1.
AID1308386Inhibition of differentiation of mouse C3H10T1/2 cells to adipocytes assessed as lipid accumulation at 20 uM by oil red O staining-based assay2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1308381Cytotoxicity against mouse C3H10T1/2 cells assessed as cell death at 100 uM after 72 hrs by MTT assay2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1308368Binding affinity to human SMARCA4 expressed in BL21 (DE3)-R3-BirA cells assessed as change in melting temperature at 10 uM by sypro-orange dye-based differential scanning fluorimetric analysis2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1308362Binding affinity to human PB1 isoform 2 expressed in BL21 (DE3)-R3-BirA cells assessed as change in melting temperature at 10 uM by sypro-orange dye-based differential scanning fluorimetric analysis2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1308377Antiproliferative activity against human RCC4 cells at 0.1 to 10 uM incubated for 24 to 72 hrs by MTT assay2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1310278Binding affinity to His6-tagged human recombinant SMARCA4 bromodomain expressed in Escherichia coli BL21(DE3)-R3-pRARE2 cells by VP-ITC microcalorimetry2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification and Development of 2,3-Dihydropyrrolo[1,2-a]quinazolin-5(1H)-one Inhibitors Targeting Bromodomains within the Switch/Sucrose Nonfermenting Complex.
AID1308363Binding affinity to human PB1 isoform 3 expressed in BL21 (DE3)-R3-BirA cells assessed as change in melting temperature at 10 uM by sypro-orange dye-based differential scanning fluorimetric analysis2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1308371Binding affinity to human SMARCA4 expressed in BL21 (DE3)-R3-BirA cells by isothermal titration calorimetry2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1683135Binding affinity to SMARCA2 (unknown origin) assessed as change in melting temperature at 20 uM by SYPRO orange dye based DSF assay2020Journal of medicinal chemistry, 12-10, Volume: 63, Issue:23
Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
AID1888666Induction of cell death in human MT330 cells assessed as reduction in cell viability at 2 uM after 3 days by ELISA2022Bioorganic & medicinal chemistry, 01-01, Volume: 53Novel structural-related analogs of PFI-3 (SRAPs) that target the BRG1 catalytic subunit of the SWI/SNF complex increase the activity of temozolomide in glioblastoma cells.
AID1683136Binding affinity to polybromo-1 (6) (unknown origin) assessed as change in melting temperature at 20 uM by SYPRO orange dye based DSF assay2020Journal of medicinal chemistry, 12-10, Volume: 63, Issue:23
Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
AID1683138Binding affinity to polybromo-1 (5) (unknown origin) assessed as change in melting temperature at 20 uM by SYPRO orange dye based DSF assay2020Journal of medicinal chemistry, 12-10, Volume: 63, Issue:23
Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
AID1683134Binding affinity to SMARCA4 (unknown origin) assessed as change in melting temperature at 20 uM by SYPRO orange dye based DSF assay2020Journal of medicinal chemistry, 12-10, Volume: 63, Issue:23
Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
AID1308379Cytotoxicity against mouse C3H10T1/2 cells assessed as cell viability up to 50 uM after 72 hrs by MTT assay2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1683110Inhibition of IBMX/insulin/dexamethasone/rosiglitazone-induced adipocyte differentiation in mouse 3T3-L1 cells assessed as reduction in C/EBPalpha mRNA expression at 5 uM incubated for 14 days by qPCR analysis2020Journal of medicinal chemistry, 12-10, Volume: 63, Issue:23
Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
AID1308378Cytotoxicity against mouse C2C12 cells assessed as cell viability up to 50 uM after 72 hrs by MTT assay2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1683111Inhibition of IBMX/insulin/dexamethasone/rosiglitazone-induced adipocyte differentiation in mouse 3T3-L1 cells assessed as reduction in PPARgamma mRNA expression at 5 uM incubated for 14 days by qPCR analysis2020Journal of medicinal chemistry, 12-10, Volume: 63, Issue:23
Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
AID1308382Inhibition of differentiation in mouse C2C12 cells assessed as suppression of MyHC expression at 1 uM by HRP-peroxidase-based immunocytochemistry2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1308366Binding affinity to human SMARC2A expressed in BL21 (DE3)-R3-BirA cells assessed as change in melting temperature at 10 uM by sypro-orange dye-based differential scanning fluorimetric analysis2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1308384Inhibition of differentiation of mouse C3H10T1/2 cells to adipocytes assessed as lipid accumulation at 1 uM by oil red O staining-based assay2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1289203Binding affinity to SMARCA4 (unknown origin) at 10 uM by DFS analysis2016Journal of medicinal chemistry, Feb-25, Volume: 59, Issue:4
Disrupting Acetyl-Lysine Recognition: Progress in the Development of Bromodomain Inhibitors.
AID1886337Inhibition of PBRM1 bromodomain 5 (unknown origin) by TR-FRET assay2022Journal of medicinal chemistry, 08-25, Volume: 65, Issue:16
GNE-064: A Potent, Selective, and Orally Bioavailable Chemical Probe for the Bromodomains of SMARCA2 and SMARCA4 and the Fifth Bromodomain of PBRM1.
AID1886335Inhibition of His-tagged SMARCA4 (unknown origin) (1448 to 1575 residues) using biotinylated ARTKQTARKSTGG-K(Ac)-APR-K(Ac)-QLAT-K(Ac)-AAR-K(Ac)-SAPGG-K as substrate incubated for 10 mins by TR-FRET assay2022Journal of medicinal chemistry, 08-25, Volume: 65, Issue:16
GNE-064: A Potent, Selective, and Orally Bioavailable Chemical Probe for the Bromodomains of SMARCA2 and SMARCA4 and the Fifth Bromodomain of PBRM1.
AID1310277Binding affinity to His6-tagged human recombinant SMARCA4 bromodomain expressed in Escherichia coli BL21(DE3)-R3-pRARE2 cells assessed as change in melting temperature at 10 uM by SyproOrange dye based DSF thermal shift assay2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification and Development of 2,3-Dihydropyrrolo[1,2-a]quinazolin-5(1H)-one Inhibitors Targeting Bromodomains within the Switch/Sucrose Nonfermenting Complex.
AID1683140Binding affinity to polybromo-1 (2) (unknown origin) assessed as change in melting temperature at 20 uM by SYPRO orange dye based DSF assay2020Journal of medicinal chemistry, 12-10, Volume: 63, Issue:23
Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
AID1886339Binding affinity to His6/FLAG-tagged SMARCA4 (unknown origin) by isothermal titration calorimetric assay2022Journal of medicinal chemistry, 08-25, Volume: 65, Issue:16
GNE-064: A Potent, Selective, and Orally Bioavailable Chemical Probe for the Bromodomains of SMARCA2 and SMARCA4 and the Fifth Bromodomain of PBRM1.
AID1886344Inhibition of SMARAC2 isoform B (unknown origin) expressed in U2OS cells co-expressed in NLS-ZsGreen incubated for 1 hrs by cellular target engagement assay2022Journal of medicinal chemistry, 08-25, Volume: 65, Issue:16
GNE-064: A Potent, Selective, and Orally Bioavailable Chemical Probe for the Bromodomains of SMARCA2 and SMARCA4 and the Fifth Bromodomain of PBRM1.
AID1308361Inhibition of differentiation in mouse C2C12 cells assessed as shortening of myotubes with lower nuclei at 500 nM to 50 uM by HRP-peroxidase-based immunocytochemistry relative to control2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1683139Binding affinity to polybromo-1 (3) (unknown origin) assessed as change in melting temperature at 20 uM by SYPRO orange dye based DSF assay2020Journal of medicinal chemistry, 12-10, Volume: 63, Issue:23
Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
AID1888668Induction of cell death in human MT330 cells assessed as reduction in cell viability at 2 uM combination with TMZ after 3 days by ELISA2022Bioorganic & medicinal chemistry, 01-01, Volume: 53Novel structural-related analogs of PFI-3 (SRAPs) that target the BRG1 catalytic subunit of the SWI/SNF complex increase the activity of temozolomide in glioblastoma cells.
AID1308376Antiproliferative activity against human 786-0 cells at 0.1 to 10 uM incubated for 24 to 72 hrs by MTT assay2016Journal of medicinal chemistry, 05-26, Volume: 59, Issue:10
Identification of a Chemical Probe for Family VIII Bromodomains through Optimization of a Fragment Hit.
AID1683109Inhibition of IBMX/insulin/dexamethasone/rosiglitazone-induced adipocyte differentiation in mouse 3T3-L1 cells assessed as reduction in FABP4 mRNA expression at 5 uM incubated for 14 days by qPCR analysis2020Journal of medicinal chemistry, 12-10, Volume: 63, Issue:23
Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
AID1683137Binding affinity to polybromo-1 (4) (unknown origin) assessed as change in melting temperature at 20 uM by SYPRO orange dye based DSF assay2020Journal of medicinal chemistry, 12-10, Volume: 63, Issue:23
Pan-SMARCA/PB1 Bromodomain Inhibitors and Their Role in Regulating Adipogenesis.
AID1347411qHTS to identify inhibitors of the type 1 interferon - major histocompatibility complex class I in skeletal muscle: primary screen against the NCATS Mechanism Interrogation Plate v5.0 (MIPE) Libary2020ACS chemical biology, 07-17, Volume: 15, Issue:7
High-Throughput Screening to Identify Inhibitors of the Type I Interferon-Major Histocompatibility Complex Class I Pathway in Skeletal Muscle.
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (14)

TimeframeStudies, This Drug (%)All Drugs %
pre-19900 (0.00)18.7374
1990's0 (0.00)18.2507
2000's0 (0.00)29.6817
2010's6 (42.86)24.3611
2020's8 (57.14)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Market Indicators

Research Demand Index: 12.03

According to the monthly volume, diversity, and competition of internet searches for this compound, as well the volume and growth of publications, there is estimated to be weak demand-to-supply ratio for research on this compound.

MetricThis Compound (vs All)
Research Demand Index12.03 (24.57)
Research Supply Index2.71 (2.92)
Research Growth Index4.73 (4.65)
Search Engine Demand Index0.00 (26.88)
Search Engine Supply Index0.00 (0.95)

This Compound (12.03)

All Compounds (24.57)

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials0 (0.00%)5.53%
Reviews0 (0.00%)6.00%
Case Studies0 (0.00%)4.05%
Observational0 (0.00%)0.25%
Other14 (100.00%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]