Assay ID | Title | Year | Journal | Article |
AID606053 | Binding affinity to ICB1 site of human topoisomerase 2alpha promoter after 17 hrs by DNase 1 footprinting assay | 2011 | Bioorganic & medicinal chemistry letters, Jun-15, Volume: 21, Issue:12
| Novel C8-linked pyrrolobenzodiazepine (PBD)-heterocycle conjugates that recognize DNA sequences containing an inverted CCAAT box. |
AID688922 | Binding affinity to 5'-TATA-TGA-TTT-TCA-TATA at 200 uM by HPLC/MS analysis | 2010 | ACS medicinal chemistry letters, Nov-11, Volume: 1, Issue:8
| DNA Sequence Preference and Adduct Orientation of Pyrrolo[2,1-c][1,4]benzodiazepine Antitumor Agents. |
AID270012 | Cytotoxicity against human K562 cell line after 96 hrs by MTT assay | 2006 | Journal of medicinal chemistry, Sep-07, Volume: 49, Issue:18
| Design, synthesis, and biophysical and biological evaluation of a series of pyrrolobenzodiazepine-poly(N-methylpyrrole) conjugates. |
AID270009 | Inhibition of DNA transcription at 5 uM | 2006 | Journal of medicinal chemistry, Sep-07, Volume: 49, Issue:18
| Design, synthesis, and biophysical and biological evaluation of a series of pyrrolobenzodiazepine-poly(N-methylpyrrole) conjugates. |
AID728943 | Cytotoxicity against human primary CLL cells after 96 hrs by annexin V/propidium iodide staining-based FACS flow cytometric analysis | 2013 | Journal of medicinal chemistry, Apr-11, Volume: 56, Issue:7
| GC-targeted C8-linked pyrrolobenzodiazepine-biaryl conjugates with femtomolar in vitro cytotoxicity and in vivo antitumor activity in mouse models. |
AID688924 | Binding affinity to 5'-TGT-TATA-TTT-TATA-ACA at 200 uM by HPLC/MS analysis | 2010 | ACS medicinal chemistry letters, Nov-11, Volume: 1, Issue:8
| DNA Sequence Preference and Adduct Orientation of Pyrrolo[2,1-c][1,4]benzodiazepine Antitumor Agents. |
AID728854 | Cytotoxicity against human A431 cells after 96 hrs by MTT assay | 2013 | Journal of medicinal chemistry, Apr-11, Volume: 56, Issue:7
| GC-targeted C8-linked pyrrolobenzodiazepine-biaryl conjugates with femtomolar in vitro cytotoxicity and in vivo antitumor activity in mouse models. |
AID728942 | Cytotoxicity against human MIAPaCa2 cells after 96 hrs by MTT assay | 2013 | Journal of medicinal chemistry, Apr-11, Volume: 56, Issue:7
| GC-targeted C8-linked pyrrolobenzodiazepine-biaryl conjugates with femtomolar in vitro cytotoxicity and in vivo antitumor activity in mouse models. |
AID1853116 | Binding affinity to AT-rich 5'-fluoro and 3'-TAMRA tagged 5'-TAT-ATA-TAG-ATA-TTT-TTT-TAT-CTA-TAT-ATA-3' hairpin DNA(unknown origin) assessed as thermal stabilization by measuring change in melting temperature at 1 uM incubated for 24 hrs by FRET analysis | 2022 | RSC medicinal chemistry, Dec-14, Volume: 13, Issue:12
| Mechanistic insight into the repair of C8-linked pyrrolobenzodiazepine monomer-mediated DNA damage. |
AID688921 | Binding affinity to 5'-TATA-AGT-TTT-ACT-TATA at 200 uM by HPLC/MS analysis | 2010 | ACS medicinal chemistry letters, Nov-11, Volume: 1, Issue:8
| DNA Sequence Preference and Adduct Orientation of Pyrrolo[2,1-c][1,4]benzodiazepine Antitumor Agents. |
AID1652597 | Antimicrobial activity against Klebsiella pneumoniae M6 by microdilution broth method | | | |
AID270008 | Cytotoxicity against human NCI60 cell line by MTT assay | 2006 | Journal of medicinal chemistry, Sep-07, Volume: 49, Issue:18
| Design, synthesis, and biophysical and biological evaluation of a series of pyrrolobenzodiazepine-poly(N-methylpyrrole) conjugates. |
AID728855 | Cytotoxicity against human A549 cells after 96 hrs by MTT assay | 2013 | Journal of medicinal chemistry, Apr-11, Volume: 56, Issue:7
| GC-targeted C8-linked pyrrolobenzodiazepine-biaryl conjugates with femtomolar in vitro cytotoxicity and in vivo antitumor activity in mouse models. |
AID1652595 | Antimicrobial activity against multidrug-resistant Acinetobacter baumannii AYE by microdilution broth method | | | |
AID1652600 | Antimicrobial activity against Pseudomonas aeruginosa PAO1 by microdilution broth method | | | |
AID606055 | Cytotoxicity against human NCI60 cells | 2011 | Bioorganic & medicinal chemistry letters, Jun-15, Volume: 21, Issue:12
| Novel C8-linked pyrrolobenzodiazepine (PBD)-heterocycle conjugates that recognize DNA sequences containing an inverted CCAAT box. |
AID1652607 | Antibacterial activity against methicillin sensitive Staphylococcus aureus NCTC 6571 by microdilution broth method | | | |
AID728851 | Binding affinity to AT-rich FAM-TATAAGATTTTCTTATA-TAMRA DNA (unknown origin) assessed as change in melting temperature at 1 uM by FRET assay | 2013 | Journal of medicinal chemistry, Apr-11, Volume: 56, Issue:7
| GC-targeted C8-linked pyrrolobenzodiazepine-biaryl conjugates with femtomolar in vitro cytotoxicity and in vivo antitumor activity in mouse models. |
AID1853118 | Binding affinity to GC-rich 5'-fluoro and 3'-TAMRA tagged 5'-TAT-AGG-GAC-AGC-CCT-ATA-3' hairpin DNA (unknown origin) assessed as thermal stabilization by measuring change in melting temperature at 1 uM incubated for 24 hrs by FRET analysis | 2022 | RSC medicinal chemistry, Dec-14, Volume: 13, Issue:12
| Mechanistic insight into the repair of C8-linked pyrrolobenzodiazepine monomer-mediated DNA damage. |
AID606052 | Binding affinity to calf thymus DNA assessed as change in melting temperature at 5 uM at pH 7 after 18 hrs by thermal denaturation assay | 2011 | Bioorganic & medicinal chemistry letters, Jun-15, Volume: 21, Issue:12
| Novel C8-linked pyrrolobenzodiazepine (PBD)-heterocycle conjugates that recognize DNA sequences containing an inverted CCAAT box. |
AID728857 | Binding affinity to AT-rich TATA-AGA-TTT-TCT-TATA DNA (unknown origin) after 5 mins by HPLC-MS analysis (Rvb = 70 %) | 2013 | Journal of medicinal chemistry, Apr-11, Volume: 56, Issue:7
| GC-targeted C8-linked pyrrolobenzodiazepine-biaryl conjugates with femtomolar in vitro cytotoxicity and in vivo antitumor activity in mouse models. |
AID1652606 | Antibacterial activity against methicillin resistant Staphylococcus aureus NCTC 13277 by microdilution broth method | | | |
AID1652687 | Stabilization of 5'-FAM-TAT-AGA-TAT-AGA-TAT-TTT-ATA-TCT-ATA-TCT-ATA-3'-TAMRA DNA (unknown origin) assessed as reduction in change in melting temperature at 1:1 to 5:1 ligand to DNA ratio measured after 3 hrs by FRET-based assay relative to control | | | |
AID728939 | Cytotoxicity against human WI38 cells after 96 hrs by MTT assay | 2013 | Journal of medicinal chemistry, Apr-11, Volume: 56, Issue:7
| GC-targeted C8-linked pyrrolobenzodiazepine-biaryl conjugates with femtomolar in vitro cytotoxicity and in vivo antitumor activity in mouse models. |
AID1614600 | Cytotoxicity against human JJN-3 cells assessed as cell death after 48 hrs by annexin V/propidium iodide-staining based flow cytometry | 2019 | Journal of medicinal chemistry, 02-28, Volume: 62, Issue:4
| Effects of Systematic Shortening of Noncovalent C8 Side Chain on the Cytotoxicity and NF-κB Inhibitory Capacity of Pyrrolobenzodiazepines (PBDs). |
AID766124 | Binding affinity to topo 2-alpha ICB1 (5'-CAGGGATTGGCTGGT-3') in mouse NIH/3T3 cells nuclear extract assessed as inhibition of NF-Y transcription factor binding at 5 uM preincubated for 1.5 hrs and by electrophoretic mobility shift assay | 2013 | Journal of medicinal chemistry, Aug-22, Volume: 56, Issue:16
| An extended pyrrolobenzodiazepine-polyamide conjugate with selectivity for a DNA sequence containing the ICB2 transcription factor binding site. |
AID1652686 | Stabilization of 5'-FAM-TAT-ATA-TAG-ATA-TTT-TTT-TAT-CTA-TAT-ATA-3'-TAMRA DNA (unknown origin) assessed as reduction in change in melting temperature at 1:1 to 5:1 ligand to DNA ratio measured after 3 hrs by FRET-based assay relative to control | | | |
AID688925 | Binding affinity to 5'-AGT-TATA-TTT-TATA-ACT at 200 uM by HPLC/MS analysis | 2010 | ACS medicinal chemistry letters, Nov-11, Volume: 1, Issue:8
| DNA Sequence Preference and Adduct Orientation of Pyrrolo[2,1-c][1,4]benzodiazepine Antitumor Agents. |
AID1652603 | Antibacterial activity against vancomycin resistant Enterococcus faecalis NCTC 12201 by microdilution broth method | | | |
AID1652604 | Antibacterial activity against vancomycin sensitive Enterococcus faecalis NCTC 775 by microdilution broth method | | | |
AID1853115 | Binding affinity to AT-rich 5'-fluoro and 3'-TAMRA tagged 5'-TAT-ATA-TAG-ATA-TTT-TTT-TAT-CTA-TAT-ATA-3' hairpin DNA (unknown origin) assessed as thermal stabilization by measuring change in melting temperature at 1 uM incubated for 3 hrs by FRET analysis | 2022 | RSC medicinal chemistry, Dec-14, Volume: 13, Issue:12
| Mechanistic insight into the repair of C8-linked pyrrolobenzodiazepine monomer-mediated DNA damage. |
AID688807 | Binding affinity to 5'-TATA-AGA-TTT-TCT-TATA at 200 uM by HPLC/MS analysis | 2010 | ACS medicinal chemistry letters, Nov-11, Volume: 1, Issue:8
| DNA Sequence Preference and Adduct Orientation of Pyrrolo[2,1-c][1,4]benzodiazepine Antitumor Agents. |
AID1652599 | Antimicrobial activity against multidrug-resistant Klebsiella pneumoniae NCTC 13368 by microdilution broth method | | | |
AID728852 | Binding affinity to GC-rich GCGC-AGA-TTT-TCT-GCGC DNA (unknown origin) after 5 mins by HPLC-MS analysis (Rvb = 12 %) | 2013 | Journal of medicinal chemistry, Apr-11, Volume: 56, Issue:7
| GC-targeted C8-linked pyrrolobenzodiazepine-biaryl conjugates with femtomolar in vitro cytotoxicity and in vivo antitumor activity in mouse models. |
AID766127 | Binding affinity to 170 bp human DNA topoisomerase 2-alpha promoter ICB2 site at 1 uM after 17 hrs by DNase 1 footprinting assay | 2013 | Journal of medicinal chemistry, Aug-22, Volume: 56, Issue:16
| An extended pyrrolobenzodiazepine-polyamide conjugate with selectivity for a DNA sequence containing the ICB2 transcription factor binding site. |
AID688808 | Binding affinity to 5'-TATA-TGT-TTT-ACA-TATA at 200 uM by HPLC/MS analysis | 2010 | ACS medicinal chemistry letters, Nov-11, Volume: 1, Issue:8
| DNA Sequence Preference and Adduct Orientation of Pyrrolo[2,1-c][1,4]benzodiazepine Antitumor Agents. |
AID728940 | Cytotoxicity against human MCF7 cells after 96 hrs by MTT assay | 2013 | Journal of medicinal chemistry, Apr-11, Volume: 56, Issue:7
| GC-targeted C8-linked pyrrolobenzodiazepine-biaryl conjugates with femtomolar in vitro cytotoxicity and in vivo antitumor activity in mouse models. |
AID766125 | Binding affinity to topo 2-alpha ICB2 (5'-CTACGATTGGTTCTT-3') in mouse NIH/3T3 cells nuclear extract assessed as inhibition of NF-Y transcription factor binding at 5 uM preincubated for 1.5 hrs by electrophoretic mobility shift assay | 2013 | Journal of medicinal chemistry, Aug-22, Volume: 56, Issue:16
| An extended pyrrolobenzodiazepine-polyamide conjugate with selectivity for a DNA sequence containing the ICB2 transcription factor binding site. |
AID1652594 | Antimicrobial activity against Acinetobacter baumannii ATCC 17978 by microdilution broth method | | | |
AID1652602 | Antibacterial activity against vancomycin resistant Enterococcus faecium NCTC 12204 by microdilution broth method | | | |
AID688923 | Binding affinity to 5'-AGA-TATA-TTT-TATA-TCT at 200 uM by HPLC/MS analysis | 2010 | ACS medicinal chemistry letters, Nov-11, Volume: 1, Issue:8
| DNA Sequence Preference and Adduct Orientation of Pyrrolo[2,1-c][1,4]benzodiazepine Antitumor Agents. |
AID728944 | Cytotoxicity against human A2780 cells after 96 hrs by MTT assay | 2013 | Journal of medicinal chemistry, Apr-11, Volume: 56, Issue:7
| GC-targeted C8-linked pyrrolobenzodiazepine-biaryl conjugates with femtomolar in vitro cytotoxicity and in vivo antitumor activity in mouse models. |
AID606054 | Binding affinity to ICB2 site of human topoisomerase 2alpha promoter after 17 hrs by DNase 1 footprinting assay | 2011 | Bioorganic & medicinal chemistry letters, Jun-15, Volume: 21, Issue:12
| Novel C8-linked pyrrolobenzodiazepine (PBD)-heterocycle conjugates that recognize DNA sequences containing an inverted CCAAT box. |
AID766122 | Binding affinity to 170 bp human DNA topoisomerase 2-alpha promoter ICB1 site at 1 uM after 17 hrs by DNase 1 footprinting assay | 2013 | Journal of medicinal chemistry, Aug-22, Volume: 56, Issue:16
| An extended pyrrolobenzodiazepine-polyamide conjugate with selectivity for a DNA sequence containing the ICB2 transcription factor binding site. |
AID1853117 | Binding affinity to GC-rich 5'-fluoro and 3'-TAMRA tagged 5'-TAT-AGG-GAC-AGC-CCT-ATA-3' hairpin DNA (unknown origin) assessed as thermal stabilization by measuring change in melting temperature at 1 uM incubated for 3 hrs by FRET analysis | 2022 | RSC medicinal chemistry, Dec-14, Volume: 13, Issue:12
| Mechanistic insight into the repair of C8-linked pyrrolobenzodiazepine monomer-mediated DNA damage. |
AID270010 | Uptake in human MCF7 cells at 100 uM after 24 hrs | 2006 | Journal of medicinal chemistry, Sep-07, Volume: 49, Issue:18
| Design, synthesis, and biophysical and biological evaluation of a series of pyrrolobenzodiazepine-poly(N-methylpyrrole) conjugates. |
AID728850 | Binding affinity to GC-rich FAM-GCGCAGATTTTCTGCGC-TAMRA DNA (unknown origin) assessed as change in melting temperature at 1 uM by FRET assay | 2013 | Journal of medicinal chemistry, Apr-11, Volume: 56, Issue:7
| GC-targeted C8-linked pyrrolobenzodiazepine-biaryl conjugates with femtomolar in vitro cytotoxicity and in vivo antitumor activity in mouse models. |
AID606051 | Binding affinity to calf thymus DNA assessed as change in melting temperature at 5 uM at pH 7 after 4 hrs by thermal denaturation assay | 2011 | Bioorganic & medicinal chemistry letters, Jun-15, Volume: 21, Issue:12
| Novel C8-linked pyrrolobenzodiazepine (PBD)-heterocycle conjugates that recognize DNA sequences containing an inverted CCAAT box. |
AID728853 | Selectivity ratio of deltaTm for GC-rich FAM-GCGCAGATTTTCTGCGC-TAMRA DNA (unknown origin) to deltaTm for AT-rich FAM-TATAAGATTTTCTTATA-TAMRA DNA (unknown origin) | 2013 | Journal of medicinal chemistry, Apr-11, Volume: 56, Issue:7
| GC-targeted C8-linked pyrrolobenzodiazepine-biaryl conjugates with femtomolar in vitro cytotoxicity and in vivo antitumor activity in mouse models. |
AID1614599 | Cytotoxicity against human primary CLL cells assessed as cell death after 48 hrs by annexin V/propidium iodide-staining based flow cytometry | 2019 | Journal of medicinal chemistry, 02-28, Volume: 62, Issue:4
| Effects of Systematic Shortening of Noncovalent C8 Side Chain on the Cytotoxicity and NF-κB Inhibitory Capacity of Pyrrolobenzodiazepines (PBDs). |
AID1652605 | Antibacterial activity against methicillin resistant Staphylococcus aureus NCTC 13616 by microdilution broth method | | | |
AID728941 | Cytotoxicity against human MDA-MB-231 cells after 96 hrs by MTT assay | 2013 | Journal of medicinal chemistry, Apr-11, Volume: 56, Issue:7
| GC-targeted C8-linked pyrrolobenzodiazepine-biaryl conjugates with femtomolar in vitro cytotoxicity and in vivo antitumor activity in mouse models. |
AID1652601 | Antimicrobial activity against multidrug-resistant Pseudomonas aeruginosa NCTC 13437 by microdilution broth method | | | |
AID1652688 | Cytotoxicity against human WI38 cells assessed as cell viability at 20 uM measured after 24 hrs by MTT assay relative to control | | | |
AID688926 | Binding affinity to 5'-TGA-TATA-TTT-TATA-TCA at 200 uM by HPLC/MS analysis | 2010 | ACS medicinal chemistry letters, Nov-11, Volume: 1, Issue:8
| DNA Sequence Preference and Adduct Orientation of Pyrrolo[2,1-c][1,4]benzodiazepine Antitumor Agents. |
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023] |