Page last updated: 2024-12-07

1,4-dideoxy-1,4-iminoarabinitol

Description Research Excerpts Clinical Trials Roles Classes Pathways Study Profile Bioassays Related Drugs Related Conditions Protein Interactions Research Growth Market Indicators

Description

1,4-dideoxy-1,4-iminoarabinitol, also known as **DNJ** (deoxynojirimycin), is a naturally occurring iminosugar with significant interest in research. Here's why:

**What it is:**

* **Structure:** DNJ is a sugar analog that resembles glucose but with a nitrogen atom replacing the oxygen atom in the ring structure.
* **Natural occurrence:** Found in plants like mulberry and various legumes.
* **Biological activity:** It's a potent inhibitor of α-glucosidase enzymes.

**Why it's important for research:**

**1. Therapeutic Potential:**

* **Type 2 Diabetes:** DNJ inhibits α-glucosidase enzymes, which are responsible for breaking down carbohydrates in the intestines. By delaying carbohydrate absorption, DNJ can help regulate blood glucose levels, making it a potential therapeutic agent for type 2 diabetes.
* **Other diseases:** DNJ has shown potential in treating other diseases like obesity, cancer, and viral infections. It's been explored for its anti-inflammatory and neuroprotective properties.

**2. Drug Development:**

* **Drug lead:** DNJ serves as a lead compound for developing novel α-glucosidase inhibitors with improved pharmacokinetic profiles and therapeutic effects.
* **Targeted delivery:** Research focuses on developing DNJ analogs with enhanced specificity for specific tissues or organs to improve efficacy and minimize side effects.

**3. Research Tool:**

* **Studying enzyme function:** DNJ acts as a valuable tool for investigating the role of α-glucosidases in various biological processes.
* **Understanding metabolism:** DNJ's interaction with carbohydrate metabolism provides insights into the regulation of glucose homeostasis and other metabolic pathways.

**Current Research:**

* **Clinical Trials:** Ongoing clinical trials are evaluating the safety and efficacy of DNJ and its derivatives as treatments for diabetes and other conditions.
* **Novel Analogs:** Researchers are actively designing and synthesizing new DNJ analogs with improved pharmacological properties.
* **Mechanistic Studies:** Investigations are underway to understand the precise mechanisms by which DNJ exerts its therapeutic effects.

**In summary:** 1,4-dideoxy-1,4-iminoarabinitol (DNJ) is a promising iminosugar with significant potential in therapeutic applications, drug development, and research. Its ability to inhibit α-glucosidases and its versatility as a research tool make it a valuable compound for exploring various aspects of human health and disease.

1,4-dideoxy-1,4-iminoarabinitol: RN given refers to (2S-(2alpha,3beta,4alpha))-isomer; structure given in first source [Medical Subject Headings (MeSH), National Library of Medicine, extracted Dec-2023]

Cross-References

ID SourceID
PubMed CID127716
CHEMBL ID406973
SCHEMBL ID754269
MeSH IDM0162282

Synonyms (25)

Synonym
3,4-pyrrolidinediol, 2-(hydroxymethyl)-, [2s-(2a,3b,4a)]-
1,4-dideoxy-1,4-imino-l-arabinitol
3,4-pyrrolidinediol, 2-(hydroxymethyl)-, (2s,3s,4s)-
(2s,3s,4s)-2-(hydroxymethyl)pyrrolidine-3,4-diol
100937-53-9
DB03411
CHEMBL406973 ,
EDG ,
bdbm50375511
l-arabinitol, 1,4-dideoxy-1,4-imino-
1,4-dideoxy-1,4-iminoarabinitol
1,4-dideoxy-1,4-iminoribitol
z330x18gmd ,
2-hydroxymethylpyrrolidine-3,4-diol
unii-z330x18gmd
1,4-ddir
SCHEMBL754269
Q27094339
C91319
DTXSID10905855
(2s,3s,4s)-3,4-dihydroxy-2-hydroxymethylpyrrolidine
GLXC-26785
gaa stabilizer 21
1,4-dideoxy-1,4-imino-l-arabinitol; (2s,3s,4s)-2-(hydroxymethyl)pyrrolidine-3,4-diol
PD007012

Research Excerpts

Pharmacokinetics

ExcerptReferenceRelevance
"To further characterize the properties of 1,4-dideoxy-1,4-imino-d-arabinitol (DAB), a recently described novel and potent inhibitor of glycogen phosphorylase and potential anti-diabetic agent, we have determined its pharmacokinetic properties in rats, dogs and mice and compared these to its pharmacodynamic anti-hyperglycaemic efficacy."( Pharmacokinetics and anti-hyperglycaemic efficacy of a novel inhibitor of glycogen phosphorylase, 1,4-dideoxy-1,4-imino-d- arabinitol, in glucagon-challenged rats and dogs and in diabetic ob/ob mice.
Andersen, JV; Mackay, P; McCormack, JG; Ynddal, L, 2003
)
0.32

Bioavailability

ExcerptReferenceRelevance
") administration; the oral bioavailability was 89%."( Pharmacokinetics and anti-hyperglycaemic efficacy of a novel inhibitor of glycogen phosphorylase, 1,4-dideoxy-1,4-imino-d- arabinitol, in glucagon-challenged rats and dogs and in diabetic ob/ob mice.
Andersen, JV; Mackay, P; McCormack, JG; Ynddal, L, 2003
)
0.32

Dosage Studied

ExcerptRelevanceReference
" DAB was very rapidly cleared in mice; nevertheless, a dose-dependent reduction of blood glucose of up to 9 mmol/l was seen in diabetic ob/ob mice dosed subcutaneously, with statistically significant effects evident from 30 to 120 min."( Pharmacokinetics and anti-hyperglycaemic efficacy of a novel inhibitor of glycogen phosphorylase, 1,4-dideoxy-1,4-imino-d- arabinitol, in glucagon-challenged rats and dogs and in diabetic ob/ob mice.
Andersen, JV; Mackay, P; McCormack, JG; Ynddal, L, 2003
)
0.32
[information is derived through text-mining from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Protein Targets (9)

Inhibition Measurements

ProteinTaxonomyMeasurementAverageMin (ref.)Avg (ref.)Max (ref.)Bioassay(s)
Trehalase Sus scrofa (pig)IC50 (µMol)131.00002.50002.50002.5000AID711095
Beta-galactosidaseEscherichia coli K-12Ki4.30004.30004.30004.3000AID1322901
Sucrase-isomaltase, intestinalHomo sapiens (human)IC50 (µMol)1.00000.04902.72947.8000AID1819252
Sucrase-isomaltase, intestinalRattus norvegicus (Norway rat)IC50 (µMol)0.82860.04001.848310.0000AID1879699; AID1879700; AID324678; AID324679; AID324680; AID711102; AID711103
Glycogen debranching enzymeHomo sapiens (human)IC50 (µMol)200.00008.40009.514310.0000AID324673
Lactase-phlorizin hydrolase Rattus norvegicus (Norway rat)IC50 (µMol)415.00000.12002.98674.4000AID711098
Alpha-galactosidaseCoffea arabica (coffee)Ki2.00000.01301.00652.0000AID1322900
Lysosomal alpha-glucosidaseRattus norvegicus (Norway rat)IC50 (µMol)0.93000.08002.50619.8500AID1879698; AID711104
[prepared from compound, protein, and bioassay information from National Library of Medicine (NLM), extracted Dec-2023]

Biological Processes (8)

Processvia Protein(s)Taxonomy
lactose catabolic processBeta-galactosidaseEscherichia coli K-12
carbohydrate metabolic processBeta-galactosidaseEscherichia coli K-12
lactose catabolic processBeta-galactosidaseEscherichia coli K-12
sucrose catabolic processSucrase-isomaltase, intestinalHomo sapiens (human)
polysaccharide digestionSucrase-isomaltase, intestinalHomo sapiens (human)
glycogen biosynthetic processGlycogen debranching enzymeHomo sapiens (human)
glycogen catabolic processGlycogen debranching enzymeHomo sapiens (human)
response to nutrientGlycogen debranching enzymeHomo sapiens (human)
response to glucocorticoidGlycogen debranching enzymeHomo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Molecular Functions (17)

Processvia Protein(s)Taxonomy
magnesium ion bindingBeta-galactosidaseEscherichia coli K-12
beta-galactosidase activityBeta-galactosidaseEscherichia coli K-12
hydrolase activity, acting on glycosyl bondsBeta-galactosidaseEscherichia coli K-12
carbohydrate bindingBeta-galactosidaseEscherichia coli K-12
alkali metal ion bindingBeta-galactosidaseEscherichia coli K-12
identical protein bindingBeta-galactosidaseEscherichia coli K-12
metal ion bindingBeta-galactosidaseEscherichia coli K-12
oligo-1,6-glucosidase activitySucrase-isomaltase, intestinalHomo sapiens (human)
sucrose alpha-glucosidase activitySucrase-isomaltase, intestinalHomo sapiens (human)
protein bindingSucrase-isomaltase, intestinalHomo sapiens (human)
carbohydrate bindingSucrase-isomaltase, intestinalHomo sapiens (human)
alpha-1,4-glucosidase activitySucrase-isomaltase, intestinalHomo sapiens (human)
glycogen debranching enzyme activityGlycogen debranching enzymeHomo sapiens (human)
4-alpha-glucanotransferase activityGlycogen debranching enzymeHomo sapiens (human)
amylo-alpha-1,6-glucosidase activityGlycogen debranching enzymeHomo sapiens (human)
protein bindingGlycogen debranching enzymeHomo sapiens (human)
polysaccharide bindingGlycogen debranching enzymeHomo sapiens (human)
polyubiquitin modification-dependent protein bindingGlycogen debranching enzymeHomo sapiens (human)
beta-maltose 4-alpha-glucanotransferase activityGlycogen debranching enzymeHomo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Ceullar Components (15)

Processvia Protein(s)Taxonomy
beta-galactosidase complexBeta-galactosidaseEscherichia coli K-12
Golgi apparatusSucrase-isomaltase, intestinalHomo sapiens (human)
plasma membraneSucrase-isomaltase, intestinalHomo sapiens (human)
brush borderSucrase-isomaltase, intestinalHomo sapiens (human)
apical plasma membraneSucrase-isomaltase, intestinalHomo sapiens (human)
extracellular exosomeSucrase-isomaltase, intestinalHomo sapiens (human)
extracellular regionGlycogen debranching enzymeHomo sapiens (human)
nucleusGlycogen debranching enzymeHomo sapiens (human)
cytoplasmGlycogen debranching enzymeHomo sapiens (human)
cytosolGlycogen debranching enzymeHomo sapiens (human)
inclusion bodyGlycogen debranching enzymeHomo sapiens (human)
sarcoplasmic reticulumGlycogen debranching enzymeHomo sapiens (human)
secretory granule lumenGlycogen debranching enzymeHomo sapiens (human)
ficolin-1-rich granule lumenGlycogen debranching enzymeHomo sapiens (human)
isoamylase complexGlycogen debranching enzymeHomo sapiens (human)
[Information is prepared from geneontology information from the June-17-2024 release]

Bioassays (35)

Assay IDTitleYearJournalArticle
AID324673Inhibition of amylo-1,6-glucosidase2008Bioorganic & medicinal chemistry, Mar-15, Volume: 16, Issue:6
Effect of five-membered sugar mimics on mammalian glycogen-degrading enzymes and various glucosidases.
AID711093Inhibition of human beta-glucocerebrosidase at 1000 uM2012Journal of medicinal chemistry, Dec-13, Volume: 55, Issue:23
α-1-C-butyl-1,4-dideoxy-1,4-imino-l-arabinitol as a second-generation iminosugar-based oral α-glucosidase inhibitor for improving postprandial hyperglycemia.
AID711094Inhibition of rat intestinal cellobiase using cellobiose as substrate at 1000 uM2012Journal of medicinal chemistry, Dec-13, Volume: 55, Issue:23
α-1-C-butyl-1,4-dideoxy-1,4-imino-l-arabinitol as a second-generation iminosugar-based oral α-glucosidase inhibitor for improving postprandial hyperglycemia.
AID711096Inhibition of rat intestinal trehalase2012Journal of medicinal chemistry, Dec-13, Volume: 55, Issue:23
α-1-C-butyl-1,4-dideoxy-1,4-imino-l-arabinitol as a second-generation iminosugar-based oral α-glucosidase inhibitor for improving postprandial hyperglycemia.
AID324681Inhibition of human lysosomal alpha glucosidase2008Bioorganic & medicinal chemistry, Mar-15, Volume: 16, Issue:6
Effect of five-membered sugar mimics on mammalian glycogen-degrading enzymes and various glucosidases.
AID1322877Inhibition of Penicillium decumbens naringinase at 2 mM after 10 to 30 mins by spectrophotometric method2016European journal of medicinal chemistry, Oct-04, Volume: 121Inhibitor versus chaperone behaviour of d-fagomine, DAB and LAB sp(2)-iminosugar conjugates against glycosidases: A structure-activity relationship study in Gaucher fibroblasts.
AID1879700Inhibition of rat intestinal sucrase assessed as release of p-nitrophenol using p-nitrophenyl glycoside as substrate by spectrometric assay2022European journal of medicinal chemistry, Apr-05, Volume: 233Design, synthesis and glycosidase inhibition of C-4 branched LAB and DAB derivatives.
AID1322900Inhibition of green coffee bean alpha-galactosidase using o-nitrophenyl alpha-D-galactopyranoside after 10 to 30 mins by spectrophotometric method2016European journal of medicinal chemistry, Oct-04, Volume: 121Inhibitor versus chaperone behaviour of d-fagomine, DAB and LAB sp(2)-iminosugar conjugates against glycosidases: A structure-activity relationship study in Gaucher fibroblasts.
AID711095Inhibition of porcine kidney trehalase2012Journal of medicinal chemistry, Dec-13, Volume: 55, Issue:23
α-1-C-butyl-1,4-dideoxy-1,4-imino-l-arabinitol as a second-generation iminosugar-based oral α-glucosidase inhibitor for improving postprandial hyperglycemia.
AID324672Inhibition of rabbit muscle glycogen phosphorylase b at 400 uM2008Bioorganic & medicinal chemistry, Mar-15, Volume: 16, Issue:6
Effect of five-membered sugar mimics on mammalian glycogen-degrading enzymes and various glucosidases.
AID710955Inhibition of bovine liver beta-galactosidase at 1000 uM2012Journal of medicinal chemistry, Dec-13, Volume: 55, Issue:23
α-1-C-butyl-1,4-dideoxy-1,4-imino-l-arabinitol as a second-generation iminosugar-based oral α-glucosidase inhibitor for improving postprandial hyperglycemia.
AID1879699Inhibition of rat intestinal isomaltase assessed as release of p-nitrophenol using p-nitrophenyl glycoside as substrate by spectrometric assay2022European journal of medicinal chemistry, Apr-05, Volume: 233Design, synthesis and glycosidase inhibition of C-4 branched LAB and DAB derivatives.
AID1322871Competitive inhibition of almond beta-glucosidase using beta-D-glycopyranoside as substrate after 10 to 30 mins by Lineweaver-Burk plot analysis2016European journal of medicinal chemistry, Oct-04, Volume: 121Inhibitor versus chaperone behaviour of d-fagomine, DAB and LAB sp(2)-iminosugar conjugates against glycosidases: A structure-activity relationship study in Gaucher fibroblasts.
AID1322868Competitive inhibition of baker's yeast isomaltase after 10 to 30 mins by Lineweaver-Burk plot analysis2016European journal of medicinal chemistry, Oct-04, Volume: 121Inhibitor versus chaperone behaviour of d-fagomine, DAB and LAB sp(2)-iminosugar conjugates against glycosidases: A structure-activity relationship study in Gaucher fibroblasts.
AID1322901Inhibition of Escherichia coli beta-galactosidase using o-nitrophenyl beta-D-galactopyranoside after 10 to 30 mins by spectrophotometric method2016European journal of medicinal chemistry, Oct-04, Volume: 121Inhibitor versus chaperone behaviour of d-fagomine, DAB and LAB sp(2)-iminosugar conjugates against glycosidases: A structure-activity relationship study in Gaucher fibroblasts.
AID1322869Competitive inhibition of Aspergillus niger amyloglucosidase after 10 to 30 mins by Lineweaver-Burk plot analysis2016European journal of medicinal chemistry, Oct-04, Volume: 121Inhibitor versus chaperone behaviour of d-fagomine, DAB and LAB sp(2)-iminosugar conjugates against glycosidases: A structure-activity relationship study in Gaucher fibroblasts.
AID1322867Competitive inhibition of baker's yeast alpha-glucosidase using alpha-D-glycopyranoside as substrate after 10 to 30 mins by Lineweaver-Burk plot analysis2016European journal of medicinal chemistry, Oct-04, Volume: 121Inhibitor versus chaperone behaviour of d-fagomine, DAB and LAB sp(2)-iminosugar conjugates against glycosidases: A structure-activity relationship study in Gaucher fibroblasts.
AID711102Inhibition of rat intestinal sucrase using sucrose as substrate2012Journal of medicinal chemistry, Dec-13, Volume: 55, Issue:23
α-1-C-butyl-1,4-dideoxy-1,4-imino-l-arabinitol as a second-generation iminosugar-based oral α-glucosidase inhibitor for improving postprandial hyperglycemia.
AID711098Inhibition of rat intestinal lactase using lactose as substrate2012Journal of medicinal chemistry, Dec-13, Volume: 55, Issue:23
α-1-C-butyl-1,4-dideoxy-1,4-imino-l-arabinitol as a second-generation iminosugar-based oral α-glucosidase inhibitor for improving postprandial hyperglycemia.
AID324680Inhibition of rat sucrase2008Bioorganic & medicinal chemistry, Mar-15, Volume: 16, Issue:6
Effect of five-membered sugar mimics on mammalian glycogen-degrading enzymes and various glucosidases.
AID1322880Inhibition of jack bean alpha-mannosidase at 2 mM after 10 to 30 mins by spectrophotometric method2016European journal of medicinal chemistry, Oct-04, Volume: 121Inhibitor versus chaperone behaviour of d-fagomine, DAB and LAB sp(2)-iminosugar conjugates against glycosidases: A structure-activity relationship study in Gaucher fibroblasts.
AID324678Inhibition of rat intestinal maltase2008Bioorganic & medicinal chemistry, Mar-15, Volume: 16, Issue:6
Effect of five-membered sugar mimics on mammalian glycogen-degrading enzymes and various glucosidases.
AID1819252Inhibition of Sucrase (unknown origin)2022Journal of medicinal chemistry, 02-10, Volume: 65, Issue:3
5-
AID324679Inhibition of rat isomaltase2008Bioorganic & medicinal chemistry, Mar-15, Volume: 16, Issue:6
Effect of five-membered sugar mimics on mammalian glycogen-degrading enzymes and various glucosidases.
AID1322881Inhibition of Helix pomatia beta-mannosidase at 2 mM after 10 to 30 mins by spectrophotometric method2016European journal of medicinal chemistry, Oct-04, Volume: 121Inhibitor versus chaperone behaviour of d-fagomine, DAB and LAB sp(2)-iminosugar conjugates against glycosidases: A structure-activity relationship study in Gaucher fibroblasts.
AID1879698Inhibition of rat intestinal maltase assessed as release of D-glucose using maltose as substrate by colorimetric analysis2022European journal of medicinal chemistry, Apr-05, Volume: 233Design, synthesis and glycosidase inhibition of C-4 branched LAB and DAB derivatives.
AID324676Inhibition of rice alpha-glucosidase2008Bioorganic & medicinal chemistry, Mar-15, Volume: 16, Issue:6
Effect of five-membered sugar mimics on mammalian glycogen-degrading enzymes and various glucosidases.
AID324677Inhibition of yeast alpha-glucosidase2008Bioorganic & medicinal chemistry, Mar-15, Volume: 16, Issue:6
Effect of five-membered sugar mimics on mammalian glycogen-degrading enzymes and various glucosidases.
AID711092Inhibition of bovine liver beta-glucosidase at 1000 uM2012Journal of medicinal chemistry, Dec-13, Volume: 55, Issue:23
α-1-C-butyl-1,4-dideoxy-1,4-imino-l-arabinitol as a second-generation iminosugar-based oral α-glucosidase inhibitor for improving postprandial hyperglycemia.
AID711104Inhibition of rat intestinal maltase using moltose as substrate2012Journal of medicinal chemistry, Dec-13, Volume: 55, Issue:23
α-1-C-butyl-1,4-dideoxy-1,4-imino-l-arabinitol as a second-generation iminosugar-based oral α-glucosidase inhibitor for improving postprandial hyperglycemia.
AID1879701Inhibition of human lysosomal alpha glucosidase assessed as release of p-nitrophenol using p-nitrophenyl glycoside as substrate by spectrometric assay2022European journal of medicinal chemistry, Apr-05, Volume: 233Design, synthesis and glycosidase inhibition of C-4 branched LAB and DAB derivatives.
AID1322875Inhibition of bovine liver cytosolic beta-glucosidase using beta-D-glycopyranoside as substrate at 2 mM after 10 to 30 mins by spectrophotometric method2016European journal of medicinal chemistry, Oct-04, Volume: 121Inhibitor versus chaperone behaviour of d-fagomine, DAB and LAB sp(2)-iminosugar conjugates against glycosidases: A structure-activity relationship study in Gaucher fibroblasts.
AID1879710Inhibition of bovine liver beta-glucosidase assessed as release of p-nitrophenol at 1000 uM using p-nitrophenyl glycoside as substrate by spectrometric assay relative to control2022European journal of medicinal chemistry, Apr-05, Volume: 233Design, synthesis and glycosidase inhibition of C-4 branched LAB and DAB derivatives.
AID1879703Inhibition of almond beta-glucosidase assessed as release of p-nitrophenol at 1000 uM using p-nitrophenyl glycoside as substrate by spectrometric assay relative to control2022European journal of medicinal chemistry, Apr-05, Volume: 233Design, synthesis and glycosidase inhibition of C-4 branched LAB and DAB derivatives.
AID711103Inhibition of rat intestinal isomaltase using isomaltase as substrate2012Journal of medicinal chemistry, Dec-13, Volume: 55, Issue:23
α-1-C-butyl-1,4-dideoxy-1,4-imino-l-arabinitol as a second-generation iminosugar-based oral α-glucosidase inhibitor for improving postprandial hyperglycemia.
[information is prepared from bioassay data collected from National Library of Medicine (NLM), extracted Dec-2023]

Research

Studies (57)

TimeframeStudies, This Drug (%)All Drugs %
pre-19901 (1.75)18.7374
1990's6 (10.53)18.2507
2000's24 (42.11)29.6817
2010's20 (35.09)24.3611
2020's6 (10.53)2.80
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]

Market Indicators

Research Demand Index: 11.34

According to the monthly volume, diversity, and competition of internet searches for this compound, as well the volume and growth of publications, there is estimated to be weak demand-to-supply ratio for research on this compound.

MetricThis Compound (vs All)
Research Demand Index11.34 (24.57)
Research Supply Index4.08 (2.92)
Research Growth Index5.41 (4.65)
Search Engine Demand Index0.00 (26.88)
Search Engine Supply Index0.00 (0.95)

This Compound (11.34)

All Compounds (24.57)

Study Types

Publication TypeThis drug (%)All Drugs (%)
Trials0 (0.00%)5.53%
Reviews1 (1.72%)6.00%
Case Studies0 (0.00%)4.05%
Observational0 (0.00%)0.25%
Other57 (98.28%)84.16%
[information is prepared from research data collected from National Library of Medicine (NLM), extracted Dec-2023]